Rh6AG082900

E3 ubiquitin-protein ligase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Reverse (-)
12464042 .. 12469561
5520 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG082900.1

Sequence Viewer

Length: 3327 bp
ATGGAGATCGCCCCGGCGCCGCCACAGCTTTCAGACCGGGACGTCCCAAACGACGCCGCGTCGCTAAGCACCGTTAAAACGGCGCCGTCGGAGAGCAACAACGAGGCGAACGTGTCGACGTCGTCGTCGTCGGTGGCGGGGAAGTACGACGATGAGGAAGAGGAGGAGGACGTGTGCCGGATCTGTAGGAACCCTGGCGACGCCGATAACCCGCTTAGGTATCCATGCGCGTGTAGCGGAAGCATCAAGTTCGTGCACCAGGATTGTCTCCTTCAGTGGCTCAATCACAGTAATGCTCGCCAATGCGAGGTTTGCAAGCATCCATTTTCCTTCTCTCCCGTTTATGCTGAGAATGCACCTGCTAGGCTTCCTTTTCAAGAGTTTGTGGTTGGGATGGCAATGAAAACTTGTCATGTTCTGCAATTTTTCCTGCGCCTTAGTTTTGTGCTTTCCGTTTGGCTCCTCATTATTCCTTTCATCACATTTTGGATATGGCGGCTGGCTTTCGTGAGGAGTTTTGGTGAAGCTCAGAGATTATTCCTAAGTCATCTATCAACTACAGTCATTCTTACTGATTGTCTGCATGGGTTCCTACTTTCTGCTAGCATTGTGTTCATTTTTCTCGGAGCCACTTCTCTGAGGGATTACTTCAGGCATTTACGTGAGCTTGGAGGTCAAGATGTTGACAGAGAAGATGAAGCAGAAAGAAATGGCGCTCGTCCTGTAAGAAGAGTTCCTGGACAAGCTAATAGGAACTTTGTTGGGGATGCTAACGGGGAAGATGCTGCTGGAGCACAAGGGATTGCTGGAGCAGGTCAAATGATTAGAAGGAATGCTGAAAATGTGGCTGCTCGCTGGGAGATGCAGGCAGCTCGTCTTGAGGCTCATGTTGAACAGATGTTTGATGGTCTAGACGATGCCGATGGTGCAGAGGATGTACCATTTGACGAGCTTGTGGGCATGCAGGGACCTGTATTTCATTTAGTGGAAAATGCATTTACTGTACTGGCAAGCAATATGATATTCCTTGGTGTAGTAATATTTGTGCCCTTCTCGTTAGGTCGGATTATACTCTATCATTTATCTTGGCTTTTCTCCACCGCTAGTGGTCCAGTTTTGTCAACAGTCATGCCACTCACTGAATCAGCCCTTTCCTTGGCTAATATGACTTTGAAGAATGCATTAACAGCTGTAACAAATTTATCAACCGATAGCGAGAAAAGTGGTATGGTTGGCCAGGTTGCAGAGATCTTGAAAGTTAACATGAGTGGACTGAATGAGGTTTCGAACAATAATGCAAGTTCAACACTTTCAGCAGACTTCCTGAAAGGGGCAACAATTGGAACTTCAAGGCTCTCTGATGTGACAACTCTTGCTATTGGATACATGTTTATATTCTCCCTAGTTTTCTTCTACCTTGGTATTGTGGCTTTCATTCGGTATACTAGGGGTGAGCCATTGACTATGGGGAGGTTTTATGGTATTGCTTCAATGGCAGAAACAATTCCATCTCTCTTCAGGCAGTTCCTGGCAGCAATGAGGCATTTGATGACAATGATTAAGGTCGCTTTCCTTCTGGTCATTGAACTTGGAGTGTTCCCATTAATGTGTGGATGGTGGTTGGATGTTTGTACTATAAGGATGTTTGGGAAGTCCATGTCTCACAGGGTGCAGTTCTTTTCAGCATCTCCCTTAGCTAGCTCCCTGGTCCATTGGGTTGTAGGAATCGTATACATGCTACAAATAAGCATATTCGTCAGTCTTCTTCGAGGGGTTCTGCGTAATGGAGTTCTTTATTTCCTTAGAGATCCAGCTGATCCAAACTACAATCCCTTCCGTGATCTCATTGATGATCCTGTGCACAAGCATGCTCGCAGGGTACTGTTATCCGTTGCGGTGTATGGGAGTTTAATTGTGATGCTGGTGTTTTTACCAGTTAAACTAGCTATGCGGATGGCACCTTCCATTTTTCCTCTTGACATTTCGGTATCTGACCCATTTACTGAAATTCCTGCGGACATGCTTCTATTTCAAATATGCATTCCATTTGCCATTGAGCATTTCAAATTACGGGCAACCATTAAATCCCTGCTCCGTTATTGGTTTACGGCAGTTGGCTGGGCACTTGGTTTAACAGATTTCTTACTACCCAGACCTGAGGATAACGTTGGACAGGAAAATGGAAATGCAGAGCCTGGAAGACAGGATAGACTACAGGTTCAATTGGGGCTACAGGATCAGGCTTTAGTGGCACTTCCAGGTGCTGATGAACCAAATCGAGGCCTTCTTGCATCAGGGGACGCGAATGTTGCAGAGGAGTATGACACTGATGAACAATCTGATTCTGAAAGGTATAGCTTTGTGCTTCGAATTGTCCTCTTGTTGGTGGTGGCTTGGATGACTTTACTCGTCTTCAACTCGGCCTTGATAGTTGTACCAACATCACTGGGAAGAACAATTTTCAATGTCATTCCTTTCCTCCCTATAACTCATGGCATCAAGTGCAATGATTTATATGCTTTCATCATTGGAAGCTACATAATATGGACTGCTGTAGCTGGAGTTAGATATTCTATTGAACACATTAGAACAAAAAGGGTTGCAGTTCTATTGGGCCAGATCTGGAAGTGGTGTAGCATTGTCATTAAGAGTTCTGCACTGTTGTCAATATGGATTTTTGTCATTCCAGTTTTGATCGGGTTGCTCTTTGAGCTTTTGGTGATTGTGCCGATGCGGGTGCCTGTTGATGAAAGCCCAGTATTCCTGCTGTATCAGGACTGGGCTTTAGGCCTTATTTTTCTCAAGATATGGACAAGATTGGTGATGTTGGATCACATGATGCCATTGGTAGATGAAAGCTGGCGCGTAAAGTTTGAAAGGGTGAGGGAAGATGGCTTCTCCAGGCTGCAAGGTCTTTGGGTGCTCCGGGAGATTGTATTCCCAATCATAATGAAGTTGTTGACTGCCCTGTGTGTGCCTTATGTACTTGCGAGAGGGTTATTTCCTGTGCTCGGTTACCCATTAGTAGTCAACTCAGCAGTGTATCGGTTTGCCTGGATAGGATGCCTGTGCTTTAGTCTGCTGTGCTTCTGTGCCAAGAGGTTCCATGTATGGTTCACCAACCTTCACAACTCTATACGTGATGACCGATATCTAATTGGTCGTAGGCTTCATAACTTTGGAGAAGATGTTGTAGAGAAGCAAAATGAGGCAGGGACATCCTCTGAATTGCAGGACTCTAGTTTTGAAGTCAGTGGTTTAATTCCTCATGACCGAGAGGCTGACGATGGTCTCCGTCAAAGGCGTGCTATCCAACATAATGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1108

Amino Acids

124.04

Weight (kDa)

5.83

Isoelectric Point (pI)

39.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RINGv PF12906 59 - 105 9.9e-17 RING-variant domain
MARCHF6_C PF23113 869 - 1047 7.9e-51 E3 ubiquitin-protein ligase MARCHF6-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 367
AasI GACNNNNNNGTC 2 cut(s) 41, 124
AatII GACGTC 2 cut(s) 45, 122
Acc36I ACCTGC 2 cut(s) 367, 803
AccB1I GGYRCC 4 cut(s) 16, 82, 1957, 2737
AccI GTMKAC 3 cut(s) 116, 1442, 1731
AccII CGCG 4 cut(s) 59, 230, 2303, 2865
AclI AACGTT 1 cut(s) 2166
AclWI GGATC 6 cut(s) 188, 1802, 1811, 1847, 2244, 2838
AcoI YGGCCR 1 cut(s) 1234
AcsI RAATTY 2 cut(s) 1198, 2007
AcuI CTGAAG 3 cut(s) 257, 634, 1501
AcyI GRCGYC 6 cut(s) 17, 42, 54, 83, 119, 201
AdeI CACNNNGTG 1 cut(s) 1669
AfaI GTAC 7 cut(s) 146, 939, 1005, 1633, 1881, 2436, 2985
AfiI CCNNNNNNNGG 6 cut(s) 307, 1156, 1330, 2279, 2383, 3011
AflIII ACRYGT 3 cut(s) 111, 171, 1386
AhdI GACNNNNNGTC 1 cut(s) 58
AjiI CACGTC 1 cut(s) 172
Alw21I GWGCWC 5 cut(s) 258, 796, 1863, 2925, 3012
Alw26I GTCTC 3 cut(s) 272, 1665, 3296
Alw44I GTGCAC 2 cut(s) 254, 1859
AlwI GGATC 6 cut(s) 188, 1802, 1811, 1847, 2244, 2838
AlwNI CAGNNNCTG 3 cut(s) 1528, 2195, 2264
AoxI GGCC 5 cut(s) 1234, 2281, 2421, 2614, 2788
ApaLI GTGCAC 2 cut(s) 254, 1859
ApeKI GCWGC 5 cut(s) 785, 848, 869, 1532, 2905
ApoI RAATTY 2 cut(s) 1198, 2007
ArsI GACNNNNNNTTYG 2 cut(s) 3227, 3259
AseI ATTAAT 1 cut(s) 1604
Asp700I GAANNNNTTC 1 cut(s) 1503
AspLEI GCGC 6 cut(s) 19, 85, 230, 435, 716, 2865
AspS9I GGNCC 4 cut(s) 968, 1109, 1708, 2614
AsuC2I CCSGG 3 cut(s) 14, 38, 2927
AsuHPI GGTGA 6 cut(s) 533, 1463, 2731, 2833, 2893, 3109
AsuII TTCGAA 2 cut(s) 1286, 2368
AsuNHI GCTAGC 2 cut(s) 602, 1697
AvaII GGWCC 3 cut(s) 968, 1109, 1708
AxyI CCTNAGG 1 cut(s) 2157
BaeGI GKGCMC 4 cut(s) 258, 1050, 1863, 2125
BalI TGGCCA 1 cut(s) 1236
BanI GGYRCC 4 cut(s) 16, 82, 1957, 2737
BbsI GAAGAC 3 cut(s) 1754, 2206, 2404
Bbv12I GWGCWC 5 cut(s) 258, 796, 1863, 2925, 3012
BbvI GCAGC 5 cut(s) 772, 835, 881, 1544, 2892
BccI CCATC 8 cut(s) 388, 899, 917, 1516, 1608, 1948, 2885, 3281
BceAI ACGGC 3 cut(s) 70, 96, 2124
BcgI CGANNNNNNTGC 6 cut(s) 232, 266, 854, 888, 2719, 2753
BciVI GTATCC 2 cut(s) 231, 1376
BcnI CCSGG 3 cut(s) 14, 38, 2927
BcoDI GTCTC 3 cut(s) 272, 1665, 3296
BfaI CTAG 9 cut(s) 363, 603, 911, 1104, 1403, 1446, 1698, 1943, 3240
BfmI CTRYAG 5 cut(s) 184, 558, 2213, 2231, 2553
BfoI RGCGCY 3 cut(s) 20, 86, 717
BfuAI ACCTGC 2 cut(s) 367, 803
BfuI GTATCC 2 cut(s) 231, 1376
BglII AGATCT 2 cut(s) 1248, 2619
BisI GCNGC 8 cut(s) 20, 57, 497, 786, 849, 870, 1533, 2906
BlpI GCTNAGC 1 cut(s) 65
BlsI GCNGC 8 cut(s) 21, 58, 498, 787, 850, 871, 1534, 2907
Bme18I GGWCC 3 cut(s) 968, 1109, 1708
BmeRI GACNNNNNGTC 1 cut(s) 58
BmgBI CACGTC 1 cut(s) 172
BmgT120I GGNCC 4 cut(s) 968, 1109, 1708, 2614
BmrI ACTGGG 3 cut(s) 2456, 2750, 2788
BmtI GCTAGC 2 cut(s) 606, 1701
BmuI ACTGGG 3 cut(s) 2456, 2750, 2788
BoxI GACNNNNGTC 1 cut(s) 3288
BpiI GAAGAC 3 cut(s) 1754, 2206, 2404
BpmI CTGGAG 4 cut(s) 810, 828, 2580, 2884
Bpu10I CCTNAGC 2 cut(s) 215, 1693
Bpu1102I GCTNAGC 1 cut(s) 65
Bpu14I TTCGAA 2 cut(s) 1286, 2368
BpuEI CTTGAG 2 cut(s) 899, 2786
BpuMI CCSGG 3 cut(s) 14, 38, 2927
BsaAI YACGTR 2 cut(s) 662, 3140
BsaHI GRCGYC 6 cut(s) 17, 42, 54, 83, 119, 201
BsaI GGTCTC 1 cut(s) 3296
BsaJI CCNNGG 6 cut(s) 12, 193, 1027, 1155, 1417, 1704
BsaXI ACNNNNNCTCC 6 cut(s) 158, 188, 505, 535, 3174, 3204
Bsc4I CCNNNNNNNGG 6 cut(s) 307, 1156, 1330, 2279, 2383, 3011
Bse1I ACTGG 7 cut(s) 1011, 1112, 1934, 2451, 2687, 2756, 2783
Bse21I CCTNAGG 1 cut(s) 2157
Bse3DI GCAATG 3 cut(s) 405, 1542, 2512
BseDI CCNNGG 6 cut(s) 12, 193, 1027, 1155, 1417, 1704
BseLI CCNNNNNNNGG 6 cut(s) 307, 1156, 1330, 2279, 2383, 3011
BseMI GCAATG 3 cut(s) 405, 1542, 2512
BseMII CTCAG 5 cut(s) 339, 542, 629, 2148, 3048
BseNI ACTGG 7 cut(s) 1011, 1112, 1934, 2451, 2687, 2756, 2783
BseRI GAGGAG 5 cut(s) 176, 179, 452, 526, 2330
BseSI GKGCMC 4 cut(s) 258, 1050, 1863, 2125
BseXI GCAGC 5 cut(s) 772, 835, 881, 1544, 2892
BseYI CCCAGC 2 cut(s) 855, 2118
BsgI GTGCAG 3 cut(s) 948, 1691, 2640
Bsh1236I CGCG 4 cut(s) 59, 230, 2303, 2865
BshFI GGCC 5 cut(s) 1236, 2283, 2423, 2616, 2790
BshNI GGYRCC 4 cut(s) 16, 82, 1957, 2737
BsiHKAI GWGCWC 5 cut(s) 258, 796, 1863, 2925, 3012
BsiSI CCGG 4 cut(s) 14, 37, 178, 2926
BslFI GGGAC 5 cut(s) 29, 53, 981, 2312, 3229
BslI CCNNNNNNNGG 6 cut(s) 307, 1156, 1330, 2279, 2383, 3011
BsmAI GTCTC 3 cut(s) 272, 1665, 3296
BsmFI GGGAC 5 cut(s) 29, 53, 981, 2312, 3229
BsmI GAATGC 4 cut(s) 358, 838, 1183, 2040
BsnI GGCC 5 cut(s) 1236, 2283, 2423, 2616, 2790
Bso31I GGTCTC 1 cut(s) 3296
Bsp119I TTCGAA 2 cut(s) 1286, 2368
Bsp1286I GDGCHC 7 cut(s) 258, 796, 1050, 1863, 2125, 2925, 3012
Bsp1720I GCTNAGC 1 cut(s) 65
BspANI GGCC 5 cut(s) 1236, 2283, 2423, 2616, 2790
BspCNI CTCAG 5 cut(s) 340, 541, 630, 2149, 3047
BspFNI CGCG 4 cut(s) 59, 230, 2303, 2865
BspHI TCATGA 1 cut(s) 3268
BspMI ACCTGC 2 cut(s) 367, 803
BspOI GCTAGC 2 cut(s) 606, 1701
BspPI GGATC 6 cut(s) 188, 1802, 1811, 1847, 2244, 2838
BspT104I TTCGAA 2 cut(s) 1286, 2368
BspT107I GGYRCC 4 cut(s) 16, 82, 1957, 2737
BspTNI GGTCTC 1 cut(s) 3296
BsrDI GCAATG 3 cut(s) 405, 1542, 2512
BsrI ACTGG 7 cut(s) 1011, 1112, 1934, 2451, 2687, 2756, 2783
BssECI CCNNGG 6 cut(s) 12, 193, 1027, 1155, 1417, 1704
BssNAI GTATAC 2 cut(s) 1443, 1732
BssNI GRCGYC 6 cut(s) 17, 42, 54, 83, 119, 201
BssT1I CCWWGG 3 cut(s) 1027, 1155, 1417
Bst1107I GTATAC 2 cut(s) 1443, 1732
Bst4CI ACNGT 7 cut(s) 73, 290, 562, 1003, 1126, 1884, 2661
Bst6I CTCTTC 3 cut(s) 153, 724, 1520
BstACI GRCGYC 6 cut(s) 17, 42, 54, 83, 119, 201
BstAPI GCANNNNNTGC 1 cut(s) 2502
BstBAI YACGTR 2 cut(s) 662, 3140
BstBI TTCGAA 2 cut(s) 1286, 2368
BstEII GGTNACC 1 cut(s) 3014
BstFNI CGCG 4 cut(s) 59, 230, 2303, 2865
BstH2I RGCGCY 3 cut(s) 20, 86, 717
BstHHI GCGC 6 cut(s) 19, 85, 230, 435, 716, 2865
BstMAI GTCTC 3 cut(s) 272, 1665, 3296
BstNSI RCATGY 5 cut(s) 964, 1390, 1738, 1871, 2023
BstPAI GACNNNNGTC 1 cut(s) 3288
BstPI GGTNACC 1 cut(s) 3014
BstSFI CTRYAG 5 cut(s) 184, 558, 2213, 2231, 2553
BstSLI GKGCMC 4 cut(s) 258, 1050, 1863, 2125
BstUI CGCG 4 cut(s) 59, 230, 2303, 2865
BstV1I GCAGC 5 cut(s) 772, 835, 881, 1544, 2892
BstV2I GAAGAC 3 cut(s) 1754, 2206, 2404
BstX2I RGATCY 4 cut(s) 180, 1248, 1807, 2619
BstYI RGATCY 4 cut(s) 180, 1248, 1807, 2619
BstZ17I GTATAC 2 cut(s) 1443, 1732
Bsu36I CCTNAGG 1 cut(s) 2157
BsuI GTATCC 2 cut(s) 231, 1376
BsuRI GGCC 5 cut(s) 1236, 2283, 2423, 2616, 2790
BtrI CACGTC 1 cut(s) 172
BtsI GCAGTG 1 cut(s) 3045
BtsIMutI CAGTG 7 cut(s) 281, 1137, 2325, 2444, 2657, 3045, 3259
BveI ACCTGC 2 cut(s) 367, 803
CaiI CAGNNNCTG 3 cut(s) 1528, 2195, 2264
CciI TCATGA 1 cut(s) 3268
CfoI GCGC 6 cut(s) 19, 85, 230, 435, 716, 2865
Cfr13I GGNCC 4 cut(s) 968, 1109, 1708, 2614
CseI GACGC 4 cut(s) 48, 62, 209, 2309
Csp6I GTAC 7 cut(s) 145, 938, 1004, 1632, 1880, 2435, 2984
CviQI GTAC 7 cut(s) 145, 938, 1004, 1632, 1880, 2435, 2984
DinI GGCGCC 2 cut(s) 18, 84
DraIII CACNNNGTG 1 cut(s) 1669
DrdI GACNNNNNNGTC 2 cut(s) 41, 124
DriI GACNNNNNGTC 1 cut(s) 58
DseDI GACNNNNNNGTC 2 cut(s) 41, 124
EaeI YGGCCR 1 cut(s) 1234
Eam1104I CTCTTC 3 cut(s) 153, 724, 1520
Eam1105I GACNNNNNGTC 1 cut(s) 58
EarI CTCTTC 3 cut(s) 153, 724, 1520
Eco130I CCWWGG 3 cut(s) 1027, 1155, 1417
Eco147I AGGCCT 2 cut(s) 2283, 2790
Eco31I GGTCTC 1 cut(s) 3296
Eco32I GATATC 1 cut(s) 3152
Eco47I GGWCC 3 cut(s) 968, 1109, 1708
Eco57I CTGAAG 3 cut(s) 257, 634, 1501
Eco81I CCTNAGG 1 cut(s) 2157
Eco91I GGTNACC 1 cut(s) 3014
EcoO109I RGGNCCY 1 cut(s) 968
EcoO65I GGTNACC 1 cut(s) 3014
EcoRV GATATC 1 cut(s) 3152
EcoT14I CCWWGG 3 cut(s) 1027, 1155, 1417
EcoT22I ATGCAT 3 cut(s) 997, 1183, 2042
EgeI GGCGCC 2 cut(s) 18, 84
EheI GGCGCC 2 cut(s) 18, 84
ErhI CCWWGG 3 cut(s) 1027, 1155, 1417
FaqI GGGAC 5 cut(s) 29, 53, 981, 2312, 3229
FauI CCCGC 3 cut(s) 130, 219, 2727
FblI GTMKAC 3 cut(s) 116, 1442, 1731
Fnu4HI GCNGC 8 cut(s) 20, 57, 497, 786, 849, 870, 1533, 2906
Fsp4HI GCNGC 8 cut(s) 20, 57, 497, 786, 849, 870, 1533, 2906
FspBI CTAG 9 cut(s) 363, 603, 911, 1104, 1403, 1446, 1698, 1943, 3240
GlaI GCGC 6 cut(s) 18, 84, 229, 434, 715, 2864
GluI GCNGC 8 cut(s) 20, 57, 497, 786, 849, 870, 1533, 2906
GsaI CCCAGC 2 cut(s) 859, 2122
GsuI CTGGAG 4 cut(s) 810, 828, 2580, 2884
HaeII RGCGCY 3 cut(s) 20, 86, 717
HaeIII GGCC 5 cut(s) 1236, 2283, 2423, 2616, 2790
HapII CCGG 4 cut(s) 14, 37, 178, 2926
HgaI GACGC 4 cut(s) 48, 62, 209, 2309
HhaI GCGC 6 cut(s) 19, 85, 230, 435, 716, 2865
Hin1I GRCGYC 6 cut(s) 17, 42, 54, 83, 119, 201
Hin6I GCGC 6 cut(s) 17, 83, 228, 433, 714, 2863
HinP1I GCGC 6 cut(s) 17, 83, 228, 433, 714, 2863
HincII GTYRAC 6 cut(s) 117, 685, 1122, 1261, 2961, 3031
HindII GTYRAC 6 cut(s) 117, 685, 1122, 1261, 2961, 3031
HinfI GANTC 4 cut(s) 1142, 1725, 2342, 3236
HpaI GTTAAC 1 cut(s) 1261
HpaII CCGG 4 cut(s) 14, 37, 178, 2926
HphI GGTGA 6 cut(s) 533, 1463, 2731, 2833, 2893, 3109
HpyAV CCTTC 9 cut(s) 281, 340, 822, 1060, 1583, 1843, 1971, 2294, 3134
HpyCH4III ACNGT 7 cut(s) 73, 290, 562, 1003, 1126, 1884, 2661
HpyCH4IV ACGT 7 cut(s) 42, 111, 119, 171, 661, 2166, 3139
HpySE526I ACGT 7 cut(s) 42, 111, 119, 171, 661, 2166, 3139
Hsp92I GRCGYC 6 cut(s) 17, 42, 54, 83, 119, 201
HspAI GCGC 6 cut(s) 17, 83, 228, 433, 714, 2863
KasI GGCGCC 2 cut(s) 16, 82
KspAI GTTAAC 1 cut(s) 1261
LmnI GCTCC 7 cut(s) 465, 626, 791, 809, 1706, 2097, 2928
Lsp1109I GCAGC 5 cut(s) 772, 835, 881, 1544, 2892
MaeI CTAG 9 cut(s) 363, 603, 911, 1104, 1403, 1446, 1698, 1943, 3240
MaeII ACGT 7 cut(s) 42, 111, 119, 171, 661, 2166, 3139
MaeIII GTNAC 3 cut(s) 1192, 1363, 3014
MfeI CAATTG 2 cut(s) 1338, 2222
MflI RGATCY 4 cut(s) 180, 1248, 1807, 2619
MhlI GDGCHC 7 cut(s) 258, 796, 1050, 1863, 2125, 2925, 3012
MlsI TGGCCA 1 cut(s) 1236
MluNI TGGCCA 1 cut(s) 1236
Mly113I GGCGCC 2 cut(s) 17, 83
MlyI GAGTC 1 cut(s) 3230
MmeI TCCRAC 5 cut(s) 69, 1043, 1602, 2149, 2808
Mox20I TGGCCA 1 cut(s) 1236
Mph1103I ATGCAT 3 cut(s) 997, 1183, 2042
MroXI GAANNNNTTC 1 cut(s) 1503
MscI TGGCCA 1 cut(s) 1236
MslI CAYNNNNRTG 5 cut(s) 229, 291, 660, 1606, 1866
Msp20I TGGCCA 1 cut(s) 1236
MspA1I CMGCKG 2 cut(s) 1190, 1814
MspI CCGG 4 cut(s) 14, 37, 178, 2926
MunI CAATTG 2 cut(s) 1338, 2222
Mva1269I GAATGC 4 cut(s) 358, 838, 1183, 2040
MvnI CGCG 4 cut(s) 59, 230, 2303, 2865
NarI GGCGCC 2 cut(s) 17, 83
NciI CCSGG 3 cut(s) 14, 38, 2927
NheI GCTAGC 2 cut(s) 602, 1697
NmeAIII GCCGAG 1 cut(s) 2399
NmuCI GTSAC 1 cut(s) 1363
NsiI ATGCAT 3 cut(s) 997, 1183, 2042
NspI RCATGY 5 cut(s) 964, 1390, 1738, 1871, 2023
NspV TTCGAA 2 cut(s) 1286, 2368
PaeI GCATGC 2 cut(s) 964, 1871
PagI TCATGA 1 cut(s) 3268
PaqCI CACCTGC 1 cut(s) 367
PceI AGGCCT 2 cut(s) 2283, 2790
PciI ACATGT 1 cut(s) 1386
PcsI WCGNNNNNNNCGW 5 cut(s) 48, 108, 122, 125, 3145
PctI GAATGC 4 cut(s) 358, 838, 1183, 2040
PdmI GAANNNNTTC 1 cut(s) 1503
PfeI GAWTC 3 cut(s) 1142, 1725, 2342
PflFI GACNNNGTC 1 cut(s) 121
PfoI TCCNGGA 2 cut(s) 736, 2925
PkrI GCNGC 8 cut(s) 21, 58, 498, 787, 850, 871, 1534, 2907
PleI GAGTC 1 cut(s) 3230
PluTI GGCGCC 2 cut(s) 20, 86
PpsI GAGTC 1 cut(s) 3230
Ppu21I YACGTR 2 cut(s) 662, 3140
PpuMI RGGWCCY 1 cut(s) 968
PscI ACATGT 1 cut(s) 1386
PshAI GACNNNNGTC 1 cut(s) 3288
PshBI ATTAAT 1 cut(s) 1604
Psp1406I AACGTT 1 cut(s) 2166
Psp5II RGGWCCY 1 cut(s) 968
PspEI GGTNACC 1 cut(s) 3014
PspFI CCCAGC 2 cut(s) 855, 2118
PspPI GGNCC 4 cut(s) 968, 1109, 1708, 2614
PspPPI RGGWCCY 1 cut(s) 968
PsrI GAACNNNNNNTAC 2 cut(s) 717, 749
PstNI CAGNNNCTG 3 cut(s) 1528, 2195, 2264
PsuI RGATCY 4 cut(s) 180, 1248, 1807, 2619
PsyI GACNNNGTC 1 cut(s) 121
PvuII CAGCTG 2 cut(s) 1190, 1814
RsaI GTAC 7 cut(s) 146, 939, 1005, 1633, 1881, 2436, 2985
RsaNI GTAC 7 cut(s) 145, 938, 1004, 1632, 1880, 2435, 2984
RseI CAYNNNNRTG 5 cut(s) 229, 291, 660, 1606, 1866
SalI GTCGAC 1 cut(s) 115
SatI GCNGC 8 cut(s) 20, 57, 497, 786, 849, 870, 1533, 2906
Sau96I GGNCC 4 cut(s) 968, 1109, 1708, 2614
SchI GAGTC 1 cut(s) 3230
SduI GDGCHC 7 cut(s) 258, 796, 1050, 1863, 2125, 2925, 3012
SfcI CTRYAG 5 cut(s) 184, 558, 2213, 2231, 2553
SfoI GGCGCC 2 cut(s) 18, 84
SfuI TTCGAA 2 cut(s) 1286, 2368
SinI GGWCC 3 cut(s) 968, 1109, 1708
SmiMI CAYNNNNRTG 5 cut(s) 229, 291, 660, 1606, 1866
SmlI CTYRAG 2 cut(s) 878, 2801
SmoI CTYRAG 2 cut(s) 878, 2801
SphI GCATGC 2 cut(s) 964, 1871
SseBI AGGCCT 2 cut(s) 2283, 2790
SspDI GGCGCC 2 cut(s) 16, 82
SspI AATATT 1 cut(s) 1041
SspMI CTAG 9 cut(s) 363, 603, 911, 1104, 1403, 1446, 1698, 1943, 3240
StuI AGGCCT 2 cut(s) 2283, 2790
StyI CCWWGG 3 cut(s) 1027, 1155, 1417
TaaI ACNGT 7 cut(s) 73, 290, 562, 1003, 1126, 1884, 2661
TaiI ACGT 7 cut(s) 45, 114, 122, 174, 664, 2169, 3142
TaqI TCGA 5 cut(s) 116, 1286, 1768, 2278, 2368
TaqII GACCGA 2 cut(s) 3162, 3288
TatI WGTACW 3 cut(s) 1003, 1631, 2983
TauI GCSGC 3 cut(s) 22, 59, 499
TfiI GAWTC 3 cut(s) 1142, 1725, 2342
TscAI CASTG 7 cut(s) 281, 1144, 2332, 2451, 2664, 3045, 3259
TseFI GTSAC 1 cut(s) 1363
TseI GCWGC 5 cut(s) 785, 848, 869, 1532, 2905
Tsp45I GTSAC 1 cut(s) 1363
TspGWI ACGGA 5 cut(s) 442, 1826, 1879, 2084, 3284
TspRI CASTG 7 cut(s) 281, 1144, 2332, 2451, 2664, 3045, 3259
Tth111I GACNNNGTC 1 cut(s) 121
VneI GTGCAC 2 cut(s) 254, 1859
VpaK11BI GGWCC 3 cut(s) 968, 1109, 1708
VspI ATTAAT 1 cut(s) 1604
XapI RAATTY 2 cut(s) 1198, 2007
XbaI TCTAGA 1 cut(s) 910
XceI RCATGY 5 cut(s) 964, 1390, 1738, 1871, 2023
XmiI GTMKAC 3 cut(s) 116, 1442, 1731
XmnI GAANNNNTTC 1 cut(s) 1503
XspI CTAG 9 cut(s) 363, 603, 911, 1104, 1403, 1446, 1698, 1943, 3240
ZraI GACGTC 2 cut(s) 43, 120
Zsp2I ATGCAT 3 cut(s) 997, 1183, 2042
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.