Prupe.8G167000_v2.0.a1

Protein of unknown function (DUF1279)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
17283696 .. 17285819
2124 bp
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UTR
Exon/CDS
Intron
Prupe.8G167000.1

Sequence Viewer

Length: 456 bp
ATGGCTTCCATCCTCAGTGCTGGCCGATTCAAAGAGCTCCTGAAGAAGTACGGCAAGGTGGCACTTGGGGTCCATTTCTCAGTCTCAGCTGCCTCAATTACAGGCCTCTACGTAGCCATCAACAACAACCTCGACGTGGAGTTGCTGCTCGACAAGCTTCACATGGGAAGCGTCTCCTCCAAAGACGAAAGCACCCAAAACCCACCCGAAATCTCTGATGGGTCGGTGTTTCGCGACAGACCCACCTCCGAAATTGGCCCATCAACGGTTGTGATTGAGGAAAAGAAGAGGAATCGGACGGCTGAGCTCGCGGCTTCAACTGGTGGGGCACTAGCATTGGCTGTGCTCTGTAACAAGGCTCTGTTTCCCCTTCGGGTTCCGATTACTCTGGCGCTTACACCTCCGTTGTCGAGGTTTTTGGCTCGGAGAAGGTTCATCAAGACCGGTGGTCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

152

Amino Acids

16.19

Weight (kDa)

9.86

Isoelectric Point (pI)

39.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 234, 311
AciI CCGC 1 cut(s) 311
AcoI YGGCCR 1 cut(s) 22
AcuI CTGAAG 1 cut(s) 62
AfaI GTAC 1 cut(s) 50
AfiI CCNNNNNNNGG 2 cut(s) 136, 265
AgeI ACCGGT 1 cut(s) 443
AgsI TTSAA 2 cut(s) 31, 318
AhdI GACNNNNNGTC 1 cut(s) 447
AjiI CACGTC 1 cut(s) 136
AluBI AGCT 4 cut(s) 37, 89, 157, 307
AluI AGCT 4 cut(s) 37, 89, 157, 307
Alw21I GWGCWC 3 cut(s) 39, 309, 348
Alw26I GTCTC 2 cut(s) 88, 178
AoxI GGCC 3 cut(s) 22, 103, 256
ApeKI GCWGC 2 cut(s) 89, 145
AsiGI ACCGGT 1 cut(s) 443
AspLEI GCGC 1 cut(s) 394
AspS9I GGNCC 2 cut(s) 70, 257
AvaII GGWCC 1 cut(s) 70
BaeGI GKGCMC 1 cut(s) 331
BanII GRGCYC 2 cut(s) 39, 309
Bbv12I GWGCWC 3 cut(s) 39, 309, 348
BbvI GCAGC 2 cut(s) 76, 132
BccI CCATC 4 cut(s) 17, 125, 212, 268
BceAI ACGGC 2 cut(s) 67, 315
BcoDI GTCTC 2 cut(s) 88, 178
BfaI CTAG 1 cut(s) 332
BfoI RGCGCY 1 cut(s) 395
BisI GCNGC 3 cut(s) 90, 146, 312
BlpI GCTNAGC 1 cut(s) 303
BlsI GCNGC 3 cut(s) 91, 147, 313
Bme18I GGWCC 1 cut(s) 70
BmeRI GACNNNNNGTC 1 cut(s) 447
BmgBI CACGTC 1 cut(s) 136
BmgT120I GGNCC 2 cut(s) 70, 257
BmiI GGNNCC 2 cut(s) 71, 378
Bpu1102I GCTNAGC 1 cut(s) 303
BsaAI YACGTR 1 cut(s) 112
BsaWI WCCGGW 1 cut(s) 443
Bsc4I CCNNNNNNNGG 2 cut(s) 136, 265
Bse118I RCCGGY 1 cut(s) 443
Bse1I ACTGG 1 cut(s) 325
BseGI GGATG 1 cut(s) 9
BseLI CCNNNNNNNGG 2 cut(s) 136, 265
BseMII CTCAG 4 cut(s) 28, 93, 99, 294
BseNI ACTGG 1 cut(s) 325
BseRI GAGGAG 1 cut(s) 166
BseSI GKGCMC 1 cut(s) 331
BseXI GCAGC 2 cut(s) 76, 132
Bsh1236I CGCG 2 cut(s) 234, 311
BshFI GGCC 3 cut(s) 24, 105, 258
BshTI ACCGGT 1 cut(s) 443
BsiHKAI GWGCWC 3 cut(s) 39, 309, 348
BsiSI CCGG 1 cut(s) 444
BslI CCNNNNNNNGG 2 cut(s) 136, 265
BsmAI GTCTC 2 cut(s) 88, 178
BsmBI CGTCTC 1 cut(s) 178
BsnI GGCC 3 cut(s) 24, 105, 258
Bsp1286I GDGCHC 4 cut(s) 39, 309, 331, 348
Bsp1720I GCTNAGC 1 cut(s) 303
Bsp68I TCGCGA 1 cut(s) 234
BspACI CCGC 1 cut(s) 311
BspANI GGCC 3 cut(s) 24, 105, 258
BspCNI CTCAG 4 cut(s) 27, 92, 98, 295
BspFNI CGCG 2 cut(s) 234, 311
BspLI GGNNCC 2 cut(s) 71, 378
BsrFI RCCGGY 1 cut(s) 443
BsrI ACTGG 1 cut(s) 325
BssAI RCCGGY 1 cut(s) 443
Bst4CI ACNGT 1 cut(s) 268
Bst6I CTCTTC 1 cut(s) 281
BstBAI YACGTR 1 cut(s) 112
BstC8I GCNNGC 2 cut(s) 22, 309
BstDEI CTNAG 4 cut(s) 14, 79, 85, 303
BstF5I GGATG 1 cut(s) 9
BstFNI CGCG 2 cut(s) 234, 311
BstH2I RGCGCY 1 cut(s) 395
BstHHI GCGC 1 cut(s) 394
BstMAI GTCTC 2 cut(s) 88, 178
BstMWI GCNNNNNNNGC 2 cut(s) 154, 308
BstSLI GKGCMC 1 cut(s) 331
BstSNI TACGTA 1 cut(s) 112
BstUI CGCG 2 cut(s) 234, 311
BstV1I GCAGC 2 cut(s) 76, 132
BsuRI GGCC 3 cut(s) 24, 105, 258
BtrI CACGTC 1 cut(s) 136
BtsCI GGATG 1 cut(s) 9
BtsIMutI CAGTG 1 cut(s) 22
BtuMI TCGCGA 1 cut(s) 234
Cac8I GCNNGC 2 cut(s) 22, 309
CfoI GCGC 1 cut(s) 394
Cfr10I RCCGGY 1 cut(s) 443
Cfr13I GGNCC 2 cut(s) 70, 257
CseI GACGC 1 cut(s) 160
Csp6I GTAC 1 cut(s) 49
CspAI ACCGGT 1 cut(s) 443
CspCI CAANNNNNGTGG 1 cut(s) 427
CviAII CATG 1 cut(s) 163
CviQI GTAC 1 cut(s) 49
DdeI CTNAG 4 cut(s) 14, 79, 85, 303
DriI GACNNNNNGTC 1 cut(s) 447
EaeI YGGCCR 1 cut(s) 22
Eam1104I CTCTTC 1 cut(s) 281
Eam1105I GACNNNNNGTC 1 cut(s) 447
EarI CTCTTC 1 cut(s) 281
Ecl136II GAGCTC 2 cut(s) 37, 307
Eco105I TACGTA 1 cut(s) 112
Eco147I AGGCCT 1 cut(s) 105
Eco24I GRGCYC 2 cut(s) 39, 309
Eco47I GGWCC 1 cut(s) 70
Eco53kI GAGCTC 2 cut(s) 37, 307
Eco57I CTGAAG 1 cut(s) 62
EcoICRI GAGCTC 2 cut(s) 37, 307
EcoT38I GRGCYC 2 cut(s) 39, 309
Esp3I CGTCTC 1 cut(s) 178
FaeI CATG 1 cut(s) 166
FaiI YATR 2 cut(s) 164, 454
FatI CATG 1 cut(s) 162
Fnu4HI GCNGC 3 cut(s) 90, 146, 312
FriOI GRGCYC 2 cut(s) 39, 309
Fsp4HI GCNGC 3 cut(s) 90, 146, 312
FspBI CTAG 1 cut(s) 332
GlaI GCGC 1 cut(s) 393
GluI GCNGC 3 cut(s) 90, 146, 312
HaeII RGCGCY 1 cut(s) 395
HaeIII GGCC 3 cut(s) 24, 105, 258
HapII CCGG 1 cut(s) 444
HgaI GACGC 1 cut(s) 160
HhaI GCGC 1 cut(s) 394
Hin1II CATG 1 cut(s) 166
Hin6I GCGC 1 cut(s) 392
HinP1I GCGC 1 cut(s) 392
HindIII AAGCTT 1 cut(s) 155
HinfI GANTC 2 cut(s) 27, 292
HpaII CCGG 1 cut(s) 444
Hpy188I TCNGA 5 cut(s) 217, 250, 297, 381, 426
Hpy188III TCNNGA 3 cut(s) 40, 233, 439
Hpy99I CGWCG 1 cut(s) 137
HpyAV CCTTC 2 cut(s) 380, 423
HpyCH4III ACNGT 1 cut(s) 268
HpyCH4IV ACGT 2 cut(s) 111, 135
HpyF10VI GCNNNNNNNGC 2 cut(s) 154, 308
HpyF3I CTNAG 4 cut(s) 14, 79, 85, 303
HpySE526I ACGT 2 cut(s) 111, 135
Hsp92II CATG 1 cut(s) 166
HspAI GCGC 1 cut(s) 392
LmnI GCTCC 1 cut(s) 42
LpnPI CCDG 5 cut(s) 6, 53, 87, 306, 374
Lsp1109I GCAGC 2 cut(s) 76, 132
MaeI CTAG 1 cut(s) 332
MaeII ACGT 2 cut(s) 111, 135
MaeIII GTNAC 1 cut(s) 350
MboII GAAGA 2 cut(s) 55, 298
MhlI GDGCHC 4 cut(s) 39, 309, 331, 348
MluCI AATT 2 cut(s) 96, 252
MspA1I CMGCKG 1 cut(s) 89
MspI CCGG 1 cut(s) 444
MvnI CGCG 2 cut(s) 234, 311
MwoI GCNNNNNNNGC 2 cut(s) 154, 308
NlaIII CATG 1 cut(s) 166
NlaIV GGNNCC 2 cut(s) 71, 378
NruI TCGCGA 1 cut(s) 234
PceI AGGCCT 1 cut(s) 105
PfeI GAWTC 2 cut(s) 27, 292
PinAI ACCGGT 1 cut(s) 443
PkrI GCNGC 3 cut(s) 91, 147, 313
Ppu21I YACGTR 1 cut(s) 112
Psp124BI GAGCTC 2 cut(s) 39, 309
PspN4I GGNNCC 2 cut(s) 71, 378
PspPI GGNCC 2 cut(s) 70, 257
PvuII CAGCTG 1 cut(s) 89
RruI TCGCGA 1 cut(s) 234
RsaI GTAC 1 cut(s) 50
RsaNI GTAC 1 cut(s) 49
SacI GAGCTC 2 cut(s) 39, 309
SatI GCNGC 3 cut(s) 90, 146, 312
Sau96I GGNCC 2 cut(s) 70, 257
SduI GDGCHC 4 cut(s) 39, 309, 331, 348
SinI GGWCC 1 cut(s) 70
SnaBI TACGTA 1 cut(s) 112
Sse9I AATT 2 cut(s) 96, 252
SseBI AGGCCT 1 cut(s) 105
SsiI CCGC 1 cut(s) 311
SspMI CTAG 1 cut(s) 332
SstI GAGCTC 2 cut(s) 39, 309
StuI AGGCCT 1 cut(s) 105
TaaI ACNGT 1 cut(s) 268
TaiI ACGT 2 cut(s) 114, 138
TaqI TCGA 3 cut(s) 132, 150, 410
TasI AATT 2 cut(s) 96, 252
TauI GCSGC 1 cut(s) 314
TfiI GAWTC 2 cut(s) 27, 292
TscAI CASTG 1 cut(s) 22
TseI GCWGC 2 cut(s) 89, 145
TspDTI ATGAA 1 cut(s) 424
TspGWI ACGGA 1 cut(s) 393
TspRI CASTG 1 cut(s) 22
VpaK11BI GGWCC 1 cut(s) 70
XspI CTAG 1 cut(s) 332
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.