Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0007761

Physical Location & Seq

Genomic Coordinates Reverse (-)

18643902 .. 18646172

Gene Structure 2271 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G192500.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1176 bp

ATGGCTTCTTCTTCTTCTTCTCCTCCTTCTCTGGCATTTCTGGGGCTAACGCTCGCTCTGGTTTTGTTAATCTCACCCGCGCATTCACTCACCTGCACCACCCAAACCTTCACCAACAACAAGCTCTACTCAAACTGCGTAGACCTCCCCACGCTCAAATCCTACCTCCACTGGACCTACGACTCGTCCAACTCCACTCTCTCAATCGCCTTCGTCGCGACTCCAGCCAAATCCGACGGCTGGATCGCGTGGGCCATCAATCCGACGAGCACCGGCATGAAGGGGGCCCAGACCCTGCTCACCTACAAGAAATCCGACGGCTCCATGGATGTCAAGACCTTCAACATCAGCTCCTACAACAATATCGTCGAGTCGAAGCTCGCTTTCGATGTCTGGGACACCAGCGCCGAGTCATCCGGCGGCGTTTTTAGGCTCTTTGCGAAGTTGAAGGTGGAGGAGATGGAGAGCGTGAACCAGGTTTGGCAAGTGGGGCCCTCTGTTTCAAATGGGTTTCCGGCGAAACATGATTTCAACACAGACAATCTCCAAGCCAAGGGGAGCCTGAGCTTGACCGGAGGCACCACAACCCCCACAACCACCACCGGAGACTCCAAGTTGAAGAAGAGGAATATTCATGGAATTTTGAATGCTGTGAGTTGGGGGTTGCTGTTTCCGATTGGGATCATCATAGCAAGGTACTTGAGGACGTTTCAGTCTGCGGATCCAGCATGGTTTTATCTTCATATATTCTGCCAGGTATCTGGTTATGCCATTGGGGTCGCCGGCTGGGCTACCGGAATTAAGCTCGGAAGTGAGTCCGAAGGGGTTGTATACTCTGCTCACCGGAAAATCGGAATCACCCTGTTCTCCCTTGCAACTGTCCAGATTTTTGCATTGTTCTTGAGACCGAAGAAGGAGCACAAGTACCGGTTCTACTGGAACATCTACCACCACACCCTCGGATACGCCATTCTCATCCTCAGCATTCTGAATGTGTTCAAGGGCCTGGACATACTAAATCCTGCCAAGCATTGGAGATCCACTTACATAATTGTGATTATTGCCTTGGGTGCAATTGCCTTGTTATTGGAAGCAATTACTTGGGTTGTGGTCTTGAAGAGGAGGTCAACCAAGTCCACCAAGCCATATGATGGTTTCAACAATGGACAAGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0009506 GO:0016020 GO:0030054 GO:0044464 GO:0055044 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cytochrom_B561 DUF568

Protein Analysis

392

Amino Acids

42.91

Weight (kDa)

9.5

Isoelectric Point (pI)

37.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007761)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25290 AT3G25290 AT4G12980
fragaria_vesca	FvH4_2g18000
malus_domestica	MD05G1164000.v1.1 MD10G1153700.v1.1
prunus_persica	Prupe.8G192500_v2.0.a1 Prupe.8G192500_v2.0.a1
pyrus_communis	pycom05g15320 pycom10g13270
rosa_chinensis	RchiOBHm_Chr6g0283371
rosa_laevigata	RLG00000012832
rosa_multiflora	Rmu_sc0003166.1_g000008 Rmu_sc0013038.1_g000001
rosa_roxburghii	Rroxscaffold_7G00185580
rosa_rugosa	Rorug06G0153100 Rorug06G0153200 Rorug06G0153300 Rorug06G0153400
rosa_samantha	Rh6AG265900 Rh6BG268500 Rh6CG268200 Rh6DG261700
rosa_wichuraiana	Rw6G023010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	101
AasI	GACNNNNNNGTC	1 cut(s)	712
Acc36I	ACCTGC	1 cut(s)	101
AccB1I	GGYRCC	1 cut(s)	578
AccB7I	CCANNNNNTGG	2 cut(s)	1032, 1151
AccI	GTMKAC	2 cut(s)	141, 831
AccII	CGCG	3 cut(s)	80, 218, 248
AciI	CCGC	3 cut(s)	78, 420, 719
AclWI	GGATC	5 cut(s)	251, 689, 716, 729, 1032
AcsI	RAATTY	1 cut(s)	639
AfaI	GTAC	2 cut(s)	698, 926
AfiI	CCNNNNNNNGG	4 cut(s)	240, 553, 1032, 1151
AgeI	ACCGGT	1 cut(s)	927
AgsI	TTSAA	9 cut(s)	343, 448, 504, 532, 619, 646, 1000, 1117, 1159
AjnI	CCWGG	3 cut(s)	474, 753, 1005
AluBI	AGCT	5 cut(s)	124, 351, 379, 567, 805
AluI	AGCT	5 cut(s)	124, 351, 379, 567, 805
Alw21I	GWGCWC	2 cut(s)	272, 921
Alw26I	GTCTC	2 cut(s)	600, 898
AlwI	GGATC	5 cut(s)	251, 689, 716, 729, 1032
AlwNI	CAGNNNCTG	1 cut(s)	295
AoxI	GGCC	4 cut(s)	252, 285, 491, 1003
ApaI	GGGCCC	2 cut(s)	289, 495
ApoI	RAATTY	1 cut(s)	639
AsiGI	ACCGGT	1 cut(s)	927
Asp700I	GAANNNNTTC	1 cut(s)	995
AspLEI	GCGC	2 cut(s)	82, 407
AspS9I	GGNCC	7 cut(s)	174, 252, 285, 286, 491, 492, 1003
AsuHPI	GGTGA	6 cut(s)	66, 82, 103, 292, 833, 850
AvaII	GGWCC	1 cut(s)	174
BaeGI	GKGCMC	2 cut(s)	289, 495
BamHI	GGATCC	1 cut(s)	721
BanI	GGYRCC	1 cut(s)	578
BanII	GRGCYC	2 cut(s)	289, 495
Bbv12I	GWGCWC	2 cut(s)	272, 921
BbvCI	CCTCAGC	1 cut(s)	980
BccI	CCATC	3 cut(s)	263, 454, 1145
BceAI	ACGGC	2 cut(s)	253, 334
BciT130I	CCWGG	3 cut(s)	476, 755, 1007
BciVI	GTATCC	1 cut(s)	956
BcoDI	GTCTC	2 cut(s)	600, 898
BfoI	RGCGCY	1 cut(s)	408
BfuAI	ACCTGC	1 cut(s)	101
BfuI	GTATCC	1 cut(s)	956
BglI	GCCNNNNNGGC	1 cut(s)	788
BisI	GCNGC	1 cut(s)	421
BlsI	GCNGC	1 cut(s)	422
Bme1390I	CCNGG	3 cut(s)	476, 755, 1007
Bme18I	GGWCC	1 cut(s)	174
BmgT120I	GGNCC	7 cut(s)	174, 252, 285, 286, 491, 492, 1003
BmiI	GGNNCC	8 cut(s)	286, 287, 322, 492, 493, 560, 580, 723
BmrFI	CCNGG	3 cut(s)	476, 755, 1007
BpmI	CTGGAG	1 cut(s)	207
Bpu10I	CCTNAGC	2 cut(s)	563, 980
BpuEI	CTTGAG	2 cut(s)	721, 922
BsaBI	GATNNNNATC	1 cut(s)	680
BsaI	GGTCTC	1 cut(s)	898
BsaJI	CCNNGG	4 cut(s)	324, 552, 958, 1065
BsaWI	WCCGGW	5 cut(s)	572, 602, 794, 843, 927
BsaXI	ACNNNNNCTCC	4 cut(s)	335, 365, 908, 938
Bsc4I	CCNNNNNNNGG	4 cut(s)	240, 553, 1032, 1151
Bse118I	RCCGGY	3 cut(s)	272, 782, 927
Bse1I	ACTGG	2 cut(s)	176, 941
Bse8I	GATNNNNATC	1 cut(s)	680
BseBI	CCWGG	3 cut(s)	476, 755, 1007
BseDI	CCNNGG	4 cut(s)	324, 552, 958, 1065
BseGI	GGATG	3 cut(s)	334, 413, 975
BseJI	GATNNNNATC	1 cut(s)	680
BseLI	CCNNNNNNNGG	4 cut(s)	240, 553, 1032, 1151
BseMII	CTCAG	2 cut(s)	554, 994
BseNI	ACTGG	2 cut(s)	176, 941
BseRI	GAGGAG	3 cut(s)	12, 470, 1135
BseSI	GKGCMC	2 cut(s)	289, 495
BseYI	CCCAGC	1 cut(s)	786
BsgI	GTGCAG	1 cut(s)	79
Bsh1236I	CGCG	3 cut(s)	80, 218, 248
BshFI	GGCC	4 cut(s)	254, 287, 493, 1005
BshNI	GGYRCC	1 cut(s)	578
BshTI	ACCGGT	1 cut(s)	927
BsiHKAI	GWGCWC	2 cut(s)	272, 921
BsiSI	CCGG	9 cut(s)	273, 417, 515, 573, 603, 783, 795, 844, 928
BslFI	GGGAC	1 cut(s)	410
BslI	CCNNNNNNNGG	4 cut(s)	240, 553, 1032, 1151
BsmAI	GTCTC	2 cut(s)	600, 898
BsmFI	GGGAC	1 cut(s)	410
BsmI	GAATGC	3 cut(s)	82, 652, 984
BsnI	GGCC	4 cut(s)	254, 287, 493, 1005
Bso31I	GGTCTC	1 cut(s)	898
Bsp120I	GGGCCC	2 cut(s)	285, 491
Bsp1286I	GDGCHC	4 cut(s)	272, 289, 495, 921
Bsp143I	GATC	4 cut(s)	243, 681, 721, 1037
Bsp19I	CCATGG	1 cut(s)	324
Bsp68I	TCGCGA	1 cut(s)	218
BspACI	CCGC	3 cut(s)	78, 420, 719
BspANI	GGCC	4 cut(s)	254, 287, 493, 1005
BspCNI	CTCAG	2 cut(s)	555, 993
BspFNI	CGCG	3 cut(s)	80, 218, 248
BspLI	GGNNCC	8 cut(s)	286, 287, 322, 492, 493, 560, 580, 723
BspMI	ACCTGC	1 cut(s)	101
BspPI	GGATC	5 cut(s)	251, 689, 716, 729, 1032
BspT107I	GGYRCC	1 cut(s)	578
BspTNI	GGTCTC	1 cut(s)	898
BsrFI	RCCGGY	3 cut(s)	272, 782, 927
BsrI	ACTGG	2 cut(s)	176, 941
BssAI	RCCGGY	3 cut(s)	272, 782, 927
BssECI	CCNNGG	4 cut(s)	324, 552, 958, 1065
BssMI	GATC	4 cut(s)	243, 681, 721, 1037
BssNAI	GTATAC	1 cut(s)	832
BssT1I	CCWWGG	3 cut(s)	324, 552, 1065
Bst1107I	GTATAC	1 cut(s)	832
Bst2UI	CCWGG	3 cut(s)	476, 755, 1007
Bst4CI	ACNGT	1 cut(s)	880
Bst6I	CTCTTC	2 cut(s)	617, 1112
BstC8I	GCNNGC	3 cut(s)	54, 381, 784
BstDEI	CTNAG	2 cut(s)	563, 980
BstDSI	CCRYGG	1 cut(s)	324
BstF5I	GGATG	3 cut(s)	334, 413, 975
BstFNI	CGCG	3 cut(s)	80, 218, 248
BstH2I	RGCGCY	1 cut(s)	408
BstHHI	GCGC	2 cut(s)	82, 407
BstKTI	GATC	4 cut(s)	246, 684, 724, 1040
BstMAI	GTCTC	2 cut(s)	600, 898
BstMBI	GATC	4 cut(s)	243, 681, 721, 1037
BstMWI	GCNNNNNNNGC	6 cut(s)	215, 224, 490, 725, 788, 1070
BstNI	CCWGG	3 cut(s)	476, 755, 1007
BstSCI	CCNGG	3 cut(s)	474, 753, 1005
BstSLI	GKGCMC	2 cut(s)	289, 495
BstUI	CGCG	3 cut(s)	80, 218, 248
BstX2I	RGATCY	2 cut(s)	721, 1037
BstXI	CCANNNNNNTGG	1 cut(s)	761
BstYI	RGATCY	2 cut(s)	721, 1037
BstZ17I	GTATAC	1 cut(s)	832
BsuI	GTATCC	1 cut(s)	956
BsuRI	GGCC	4 cut(s)	254, 287, 493, 1005
BtgI	CCRYGG	1 cut(s)	324
BtsCI	GGATG	3 cut(s)	334, 413, 975
BtsIMutI	CAGTG	1 cut(s)	169
BtuMI	TCGCGA	1 cut(s)	218
BveI	ACCTGC	1 cut(s)	101
Cac8I	GCNNGC	3 cut(s)	54, 381, 784
CaiI	CAGNNNCTG	1 cut(s)	295
CfoI	GCGC	2 cut(s)	82, 407
Cfr10I	RCCGGY	3 cut(s)	272, 782, 927
Cfr13I	GGNCC	7 cut(s)	174, 252, 285, 286, 491, 492, 1003
CsiI	ACCWGGT	1 cut(s)	474
Csp6I	GTAC	2 cut(s)	697, 925
CspAI	ACCGGT	1 cut(s)	927
CviAII	CATG	5 cut(s)	277, 325, 524, 635, 729
CviQI	GTAC	2 cut(s)	697, 925
DdeI	CTNAG	2 cut(s)	563, 980
DpnI	GATC	4 cut(s)	245, 683, 723, 1039
DpnII	GATC	4 cut(s)	243, 681, 721, 1037
DrdI	GACNNNNNNGTC	1 cut(s)	712
DseDI	GACNNNNNNGTC	1 cut(s)	712
Eam1104I	CTCTTC	2 cut(s)	617, 1112
EarI	CTCTTC	2 cut(s)	617, 1112
Eco130I	CCWWGG	3 cut(s)	324, 552, 1065
Eco24I	GRGCYC	2 cut(s)	289, 495
Eco31I	GGTCTC	1 cut(s)	898
Eco47I	GGWCC	1 cut(s)	174
EcoO109I	RGGNCCY	4 cut(s)	285, 491, 492, 1003
EcoRII	CCWGG	3 cut(s)	474, 753, 1005
EcoT14I	CCWWGG	3 cut(s)	324, 552, 1065
EcoT38I	GRGCYC	2 cut(s)	289, 495
ErhI	CCWWGG	3 cut(s)	324, 552, 1065
FaeI	CATG	5 cut(s)	280, 328, 527, 638, 732
FaqI	GGGAC	1 cut(s)	410
FatI	CATG	5 cut(s)	276, 324, 523, 634, 728
FauI	CCCGC	1 cut(s)	85
FauNDI	CATATG	1 cut(s)	1147
FblI	GTMKAC	2 cut(s)	141, 831
Fnu4HI	GCNGC	1 cut(s)	421
FokI	GGATG	3 cut(s)	341, 400, 962
FriOI	GRGCYC	2 cut(s)	289, 495
Fsp4HI	GCNGC	1 cut(s)	421
GlaI	GCGC	2 cut(s)	81, 406
GluI	GCNGC	1 cut(s)	421
GsaI	CCCAGC	1 cut(s)	790
GsuI	CTGGAG	1 cut(s)	207
HaeII	RGCGCY	1 cut(s)	408
HaeIII	GGCC	4 cut(s)	254, 287, 493, 1005
HapII	CCGG	9 cut(s)	273, 417, 515, 573, 603, 783, 795, 844, 928
HhaI	GCGC	2 cut(s)	82, 407
Hin1II	CATG	5 cut(s)	280, 328, 527, 638, 732
Hin6I	GCGC	2 cut(s)	80, 405
HinP1I	GCGC	2 cut(s)	80, 405
HincII	GTYRAC	1 cut(s)	1128
HindII	GTYRAC	1 cut(s)	1128
HinfI	GANTC	7 cut(s)	182, 220, 371, 410, 608, 815, 855
HpaII	CCGG	9 cut(s)	273, 417, 515, 573, 603, 783, 795, 844, 928
HphI	GGTGA	6 cut(s)	66, 82, 103, 292, 833, 850
Hpy166II	GTNNAC	5 cut(s)	142, 472, 832, 1128, 1137
Hpy188I	TCNGA	9 cut(s)	235, 264, 316, 675, 809, 820, 854, 962, 990
Hpy188III	TCNNGA	5 cut(s)	217, 334, 883, 901, 1114
Hpy8I	GTNNAC	5 cut(s)	142, 472, 832, 1128, 1137
Hpy99I	CGWCG	5 cut(s)	218, 239, 268, 320, 371
HpyAV	CCTTC	8 cut(s)	36, 118, 220, 274, 349, 442, 815, 907
HpyCH4III	ACNGT	1 cut(s)	880
HpyCH4IV	ACGT	1 cut(s)	707
HpyCH4V	TGCA	4 cut(s)	96, 875, 893, 1073
HpyF10VI	GCNNNNNNNGC	6 cut(s)	215, 224, 490, 725, 788, 1070
HpyF3I	CTNAG	2 cut(s)	563, 980
HpySE526I	ACGT	1 cut(s)	707
Hsp92II	CATG	5 cut(s)	280, 328, 527, 638, 732
HspAI	GCGC	2 cut(s)	80, 405
KroI	GCCGGC	1 cut(s)	782
KroNI	GCCGGC	1 cut(s)	784
Kzo9I	GATC	4 cut(s)	243, 681, 721, 1037
LmnI	GCTCC	4 cut(s)	326, 356, 558, 916
MabI	ACCWGGT	1 cut(s)	474
MaeII	ACGT	1 cut(s)	707
MalI	GATC	4 cut(s)	245, 683, 723, 1039
MboI	GATC	4 cut(s)	243, 681, 721, 1037
MboII	GAAGA	8 cut(s)	3, 6, 9, 631, 634, 731, 922, 1129
MfeI	CAATTG	1 cut(s)	1074
MflI	RGATCY	2 cut(s)	721, 1037
MhlI	GDGCHC	4 cut(s)	272, 289, 495, 921
MluCI	AATT	5 cut(s)	639, 798, 1050, 1074, 1095
MlyI	GAGTC	6 cut(s)	176, 214, 380, 419, 602, 824
MmeI	TCCRAC	4 cut(s)	213, 258, 287, 339
MroNI	GCCGGC	1 cut(s)	782
MroXI	GAANNNNTTC	1 cut(s)	995
MseI	TTAA	2 cut(s)	68, 801
MslI	CAYNNNNRTG	2 cut(s)	275, 1052
MspI	CCGG	9 cut(s)	273, 417, 515, 573, 603, 783, 795, 844, 928
MspR9I	CCNGG	3 cut(s)	476, 755, 1007
MunI	CAATTG	1 cut(s)	1074
Mva1269I	GAATGC	3 cut(s)	82, 652, 984
MvaI	CCWGG	3 cut(s)	476, 755, 1007
MvnI	CGCG	3 cut(s)	80, 218, 248
MwoI	GCNNNNNNNGC	6 cut(s)	215, 224, 490, 725, 788, 1070
NaeI	GCCGGC	1 cut(s)	784
NcoI	CCATGG	1 cut(s)	324
NdeI	CATATG	1 cut(s)	1147
NdeII	GATC	4 cut(s)	243, 681, 721, 1037
NgoMIV	GCCGGC	1 cut(s)	782
NlaIII	CATG	5 cut(s)	280, 328, 527, 638, 732
NlaIV	GGNNCC	8 cut(s)	286, 287, 322, 492, 493, 560, 580, 723
NmeAIII	GCCGAG	1 cut(s)	433
NruI	TCGCGA	1 cut(s)	218
PaqCI	CACCTGC	1 cut(s)	101
PctI	GAATGC	3 cut(s)	82, 652, 984
PdiI	GCCGGC	1 cut(s)	784
PdmI	GAANNNNTTC	1 cut(s)	995
PfeI	GAWTC	1 cut(s)	855
PflMI	CCANNNNNTGG	2 cut(s)	1032, 1151
PinAI	ACCGGT	1 cut(s)	927
PkrI	GCNGC	1 cut(s)	422
PleI	GAGTC	6 cut(s)	176, 214, 379, 418, 602, 823
PpsI	GAGTC	6 cut(s)	176, 214, 379, 418, 602, 823
Psp6I	CCWGG	3 cut(s)	474, 753, 1005
PspFI	CCCAGC	1 cut(s)	786
PspGI	CCWGG	3 cut(s)	474, 753, 1005
PspN4I	GGNNCC	8 cut(s)	286, 287, 322, 492, 493, 560, 580, 723
PspOMI	GGGCCC	2 cut(s)	285, 491
PspPI	GGNCC	7 cut(s)	174, 252, 285, 286, 491, 492, 1003
PstNI	CAGNNNCTG	1 cut(s)	295
PsuI	RGATCY	2 cut(s)	721, 1037
RruI	TCGCGA	1 cut(s)	218
RsaI	GTAC	2 cut(s)	698, 926
RsaNI	GTAC	2 cut(s)	697, 925
RseI	CAYNNNNRTG	2 cut(s)	275, 1052
SaqAI	TTAA	2 cut(s)	68, 801
SatI	GCNGC	1 cut(s)	421
Sau3AI	GATC	4 cut(s)	243, 681, 721, 1037
Sau96I	GGNCC	7 cut(s)	174, 252, 285, 286, 491, 492, 1003
SchI	GAGTC	6 cut(s)	176, 214, 380, 419, 602, 824
ScrFI	CCNGG	3 cut(s)	476, 755, 1007
SduI	GDGCHC	4 cut(s)	272, 289, 495, 921
SexAI	ACCWGGT	1 cut(s)	474
SinI	GGWCC	1 cut(s)	174
SmiMI	CAYNNNNRTG	2 cut(s)	275, 1052
SmlI	CTYRAG	2 cut(s)	700, 901
SmoI	CTYRAG	2 cut(s)	700, 901
Sse9I	AATT	5 cut(s)	639, 798, 1050, 1074, 1095
SsiI	CCGC	3 cut(s)	78, 420, 719
SspI	AATATT	1 cut(s)	631
StyD4I	CCNGG	3 cut(s)	474, 753, 1005
StyI	CCWWGG	3 cut(s)	324, 552, 1065
TaaI	ACNGT	1 cut(s)	880
TaiI	ACGT	1 cut(s)	710
TaqI	TCGA	3 cut(s)	369, 374, 387
TaqII	GACCGA	1 cut(s)	922
TasI	AATT	5 cut(s)	639, 798, 1050, 1074, 1095
TauI	GCSGC	1 cut(s)	423
TfiI	GAWTC	1 cut(s)	855
Tru1I	TTAA	2 cut(s)	68, 801
Tru9I	TTAA	2 cut(s)	68, 801
TscAI	CASTG	1 cut(s)	176
TspDTI	ATGAA	3 cut(s)	293, 623, 731
TspRI	CASTG	1 cut(s)	176
Van91I	CCANNNNNTGG	2 cut(s)	1032, 1151
VpaK11BI	GGWCC	1 cut(s)	174
XapI	RAATTY	1 cut(s)	639
XmiI	GTMKAC	2 cut(s)	141, 831
XmnI	GAANNNNTTC	1 cut(s)	995

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.