Prupe.8G228900_v2.0.a1

Subtilisin-chymotrypsin inhibitor WSCI

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0008933
Physical Location & Seq
Reverse (-)
20487544 .. 20488657
1114 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G228900.1

Sequence Viewer

Length: 210 bp
ATGTTACATTGTCCAGGTAAACAGGCGTGGCCGGAGGTGGTGGGGCATAGTGGGCAAGATGCAGCGGCAAAGATAGAGCGAGAGAATCATAATGTTCGAGCAATCGTCATACTGGAAGGCTCTCCAGCCACCAAGGACTTGAGATGTGACAGAGTCCGGGTCTGGATCAATCGAAACGGCGTCGTCGTTAGGCCCCCTCATGTTGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
potato_inhibit

Protein Analysis

70

Amino Acids

7.64

Weight (kDa)

9.38

Isoelectric Point (pI)

46.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 65
AclWI GGATC 1 cut(s) 173
AcoI YGGCCR 1 cut(s) 29
AcyI GRCGYC 1 cut(s) 180
AfiI CCNNNNNNNGG 1 cut(s) 203
AjnI CCWGG 1 cut(s) 13
AlwI GGATC 1 cut(s) 173
AoxI GGCC 2 cut(s) 29, 191
ApeKI GCWGC 1 cut(s) 62
AspS9I GGNCC 1 cut(s) 192
AsuC2I CCSGG 1 cut(s) 158
BbvI GCAGC 1 cut(s) 74
BceAI ACGGC 1 cut(s) 193
BciT130I CCWGG 1 cut(s) 15
BcnI CCSGG 1 cut(s) 158
BfaI CTAG 1 cut(s) 208
BisI GCNGC 2 cut(s) 63, 66
BlsI GCNGC 2 cut(s) 64, 67
Bme1390I CCNGG 2 cut(s) 15, 158
BmgT120I GGNCC 1 cut(s) 192
BmiI GGNNCC 1 cut(s) 194
BmrFI CCNGG 2 cut(s) 15, 158
BmsI GCATC 1 cut(s) 49
BpmI CTGGAG 1 cut(s) 108
BpuEI CTTGAG 1 cut(s) 160
BpuMI CCSGG 1 cut(s) 158
BsaHI GRCGYC 1 cut(s) 180
BsaJI CCNNGG 1 cut(s) 132
Bsc4I CCNNNNNNNGG 1 cut(s) 203
Bse1I ACTGG 1 cut(s) 117
BseBI CCWGG 1 cut(s) 15
BseDI CCNNGG 1 cut(s) 132
BseLI CCNNNNNNNGG 1 cut(s) 203
BseNI ACTGG 1 cut(s) 117
BseXI GCAGC 1 cut(s) 74
BshFI GGCC 2 cut(s) 31, 193
BsiSI CCGG 2 cut(s) 32, 157
BslI CCNNNNNNNGG 1 cut(s) 203
BsnI GGCC 2 cut(s) 31, 193
Bsp143I GATC 1 cut(s) 165
BspACI CCGC 1 cut(s) 65
BspANI GGCC 2 cut(s) 31, 193
BspLI GGNNCC 1 cut(s) 194
BspPI GGATC 1 cut(s) 173
BsrI ACTGG 1 cut(s) 117
BssECI CCNNGG 1 cut(s) 132
BssMI GATC 1 cut(s) 165
BssNI GRCGYC 1 cut(s) 180
BssT1I CCWWGG 1 cut(s) 132
Bst2UI CCWGG 1 cut(s) 15
BstACI GRCGYC 1 cut(s) 180
BstKTI GATC 1 cut(s) 168
BstMBI GATC 1 cut(s) 165
BstMWI GCNNNNNNNGC 1 cut(s) 52
BstNI CCWGG 1 cut(s) 15
BstSCI CCNGG 2 cut(s) 13, 156
BstV1I GCAGC 1 cut(s) 74
BsuRI GGCC 2 cut(s) 31, 193
Cfr13I GGNCC 1 cut(s) 192
CseI GACGC 1 cut(s) 169
CviAII CATG 1 cut(s) 200
CviJI RGCY 5 cut(s) 31, 120, 128, 193, 207
CviKI_1 RGCY 5 cut(s) 31, 120, 128, 193, 207
DpnI GATC 1 cut(s) 167
DpnII GATC 1 cut(s) 165
EaeI YGGCCR 1 cut(s) 29
Eco130I CCWWGG 1 cut(s) 132
EcoO109I RGGNCCY 1 cut(s) 192
EcoRII CCWGG 1 cut(s) 13
EcoT14I CCWWGG 1 cut(s) 132
ErhI CCWWGG 1 cut(s) 132
FaeI CATG 1 cut(s) 203
FaiI YATR 4 cut(s) 48, 90, 110, 201
FatI CATG 1 cut(s) 199
Fnu4HI GCNGC 2 cut(s) 63, 66
Fsp4HI GCNGC 2 cut(s) 63, 66
FspBI CTAG 1 cut(s) 208
GluI GCNGC 2 cut(s) 63, 66
GsuI CTGGAG 1 cut(s) 108
HaeIII GGCC 2 cut(s) 31, 193
HapII CCGG 2 cut(s) 32, 157
HgaI GACGC 1 cut(s) 169
Hin1I GRCGYC 1 cut(s) 180
Hin1II CATG 1 cut(s) 203
HinfI GANTC 2 cut(s) 85, 153
HpaII CCGG 2 cut(s) 32, 157
Hpy166II GTNNAC 1 cut(s) 20
Hpy188III TCNNGA 1 cut(s) 163
Hpy8I GTNNAC 1 cut(s) 20
Hpy99I CGWCG 2 cut(s) 185, 188
HpyAV CCTTC 1 cut(s) 110
HpyCH4V TGCA 1 cut(s) 62
HpyF10VI GCNNNNNNNGC 1 cut(s) 52
Hsp92I GRCGYC 1 cut(s) 180
Hsp92II CATG 1 cut(s) 203
Kzo9I GATC 1 cut(s) 165
LpnPI CCDG 7 cut(s) 8, 27, 45, 98, 138, 148, 170
Lsp1109I GCAGC 1 cut(s) 74
LweI GCATC 1 cut(s) 49
MaeI CTAG 1 cut(s) 208
MaeIII GTNAC 2 cut(s) 3, 146
MalI GATC 1 cut(s) 167
MboI GATC 1 cut(s) 165
MlyI GAGTC 1 cut(s) 162
MnlI CCTC 2 cut(s) 28, 207
MspA1I CMGCKG 1 cut(s) 65
MspI CCGG 2 cut(s) 32, 157
MspR9I CCNGG 2 cut(s) 15, 158
MvaI CCWGG 1 cut(s) 15
MwoI GCNNNNNNNGC 1 cut(s) 52
NciI CCSGG 1 cut(s) 158
NdeII GATC 1 cut(s) 165
NlaIII CATG 1 cut(s) 203
NlaIV GGNNCC 1 cut(s) 194
NmuCI GTSAC 1 cut(s) 146
PcsI WCGNNNNNNNCGW 1 cut(s) 183
PfeI GAWTC 1 cut(s) 85
PflFI GACNNNGTC 1 cut(s) 152
PkrI GCNGC 2 cut(s) 64, 67
PleI GAGTC 1 cut(s) 161
PpsI GAGTC 1 cut(s) 161
Psp6I CCWGG 1 cut(s) 13
PspGI CCWGG 1 cut(s) 13
PspN4I GGNNCC 1 cut(s) 194
PspPI GGNCC 1 cut(s) 192
PsyI GACNNNGTC 1 cut(s) 152
SatI GCNGC 2 cut(s) 63, 66
Sau3AI GATC 1 cut(s) 165
Sau96I GGNCC 1 cut(s) 192
SchI GAGTC 1 cut(s) 162
ScrFI CCNGG 2 cut(s) 15, 158
SetI ASST 2 cut(s) 19, 39
SfaNI GCATC 1 cut(s) 49
SmlI CTYRAG 1 cut(s) 139
SmoI CTYRAG 1 cut(s) 139
SsiI CCGC 1 cut(s) 65
SspMI CTAG 1 cut(s) 208
StyD4I CCNGG 2 cut(s) 13, 156
StyI CCWWGG 1 cut(s) 132
TaqI TCGA 2 cut(s) 97, 172
TauI GCSGC 1 cut(s) 68
TfiI GAWTC 1 cut(s) 85
TseFI GTSAC 1 cut(s) 146
TseI GCWGC 1 cut(s) 62
Tsp45I GTSAC 1 cut(s) 146
Tth111I GACNNNGTC 1 cut(s) 152
XspI CTAG 1 cut(s) 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.