Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0008933

Physical Location & Seq

Genomic Coordinates Forward (+)

38745761 .. 38766019

Gene Structure 20259 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0332600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGCAGTCTTACATTGGGGTGTTGGCACGTACAAAGATCCCTATCTCAATAAATGATTGGAGAGAAGTGGATCCAGATGAAAAGGAAAAGATATGGGAATCTATAACGGATGCATTTGTGGTGCCTAAAGAGCTTAAAAAAATGGTGATTTCATCTGCTGCAACTAAACGAAAATACGTGAAGCCCAAATTGCAAAGCGAAAGGAGAATAAATATCCTCATCGTATGTCACGCAAAGTCTGAAAGTGTCCCTTTAGAAGAACTTGATAAAGCTACAATGTGGATCAAGGCTCGGCAAGATAAGAATGGCAACTTGAAACAGCCTGAGATAGAGAAGAAAGCCGAAAAAATTGAACATTTAAGGAAAAGGGAGGCTAAAGGGGAAATTGCCACATCTGGGTCTGATGATGTGCTCACTCTTGCATTGGGGAATCCGGAGCATAGAGGTAGGGTTAGAGGTGTTGGTGGCAATGTCAATCCCGATTTATATTTCAACTTGCCAAAACGCCAAAAGATGACTTTTGAACAGAAGACTAGGTTATCGCTGAAGAAGATACTAGAGGAGGAGAAGGAAGTTTTGTTAGCTAAGGAAAGAACTGCATGGGAGGAGGAGAGGGATAGAAAACTTGCTGAGGAGAGAGCTTATTGGACTGAGAAGATTGCGAAGCTAGAAGCGAAGGTCGATGGGAAGGAGCTGCCTGTTGAGTCCCCCAAACCTGTCACAGTAGTTAATGAGCTTGGTTCAGGACAAGGGAGTTGTTCTCGCCAAGGGGAGAAGGCTGCGGAGAAGGCTGCACATGATAATATTGAAGCTGAGGTGAAGGGTGTGAAGAAGAAGTTGGTTTTAAGAGATGAAGTGAGCATCGAGGTTGAAGAGGAAATTGTGCAGCGCAGTGATGAGAGGGTACGGTTAAACCCGATATTTGAAGAGGAGGTTAGAGAAGATGTCACTGCACTAGAGGCACCAGTACATGGTGAAGAGGAACAATTAGGTGAGACCAAGTATAAACTGGCCATTGACACGGTGGAAAACATTGTGGCTATTGGAACTGTCATCAGTGTCGACCTTGAGACCAAACAGCAAACAATCCATGGTGTTCCACTTGGAGAGGAGAATTTGCGTGTCTCTATCACAGAAACTGTTGTTCCTGAAGCTTTGCTGCCATTTCCCATAAAAGATGAGATAGTGAAGGTCAAGGATGCCATTGGGACTTGTGTCGCTTGGCCGAGGAACCTTGTTATTGCCCCTGCACCTGGTGGGAAGGACATCTATGCTATGACACACTTGTTGGAAATTTCAGGCAGCTGCATTGCTTTTTACATGAGCTACCTTCAAGGTGTGTTGAAGAAGGCTAAGATGAATGACATGGTCGCCTTTATCTACCCTGCTCACACGGGTGCAAGTGGCTGTGGAAATCCAACCGAACGAGCTCGCTTAGTATCAAATCGGTTCATAAATGGGAAGTCTGGGCAGATTTATTTGGTCCCATATAATTCAGGTGGTCATTGGACGTTGTCTGCTGTGAATCCAGATGAAGAAACCATTCACTTCATGGATCCGTTAAAGAGGCGACTCATCACTGGTGAATGGAAAACAATTCTGGACAACTCCATTAAAATCTACAATGCGCACAAGAATAAGAAAGGGAGGAAAACCATTCAATGGAAAAATCTTGCTGGCATTCCGGCGCAGAAAGATAGTAAGACTTGTGGGTATTGGATCATGCGCTACATGAAGGAGATAGTGGAAGATAAGAATTTGGAGTTTGCAGCTAAATGGGAAAGAAGGACAAATCTTATTTACACAGAAAAGGACATTGATCAAGTTCGGGCAGAATGGGCGAAGCATGTTATCATGTTTCCAGATATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

potato_inhibit

Protein Analysis

623

Amino Acids

70.69

Weight (kDa)

7.97

Isoelectric Point (pI)

43.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF8039	PF26133	339 - 414	1.5e-10	Domain of unknown function (DUF8039)
Peptidase_C48	PF02902	492 - 616	8.3e-10	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008933)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38870 AT2G38900 AT2G38900
fragaria_vesca	FvH4_4g02940 FvH4_4g02940
malus_domestica	MD05G1203000.v1.1 MD13G1208800.v1.1
prunus_persica	Prupe.1G032900_v2.0.a1 Prupe.8G228900_v2.0.a1 Prupe.8G229000_v2.0.a1 Prupe.8G229400_v2.0.a1
pyrus_communis	pycom10g16380
rosa_chinensis	RchiOBHm_Chr4g0391001
rosa_multiflora	Rmu_sc0001824.1_g000013 Rmu_sc0016732.1_g000002
rosa_roxburghii	Rroxscaffold_5G00336840
rosa_rugosa	Rorug03G0332600
rosa_samantha	Rh4AG034100 Rh4BG028600 Rh4CG037500 Rh4DG031400
rosa_wichuraiana	Rw4G002650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1629
AccB1I	GGYRCC	2 cut(s)	121, 961
AccB7I	CCANNNNNTGG	2 cut(s)	971, 1662
AccI	GTMKAC	1 cut(s)	1062
AccIII	TCCGGA	1 cut(s)	433
AciI	CCGC	1 cut(s)	782
AclWI	GGATC	7 cut(s)	31, 65, 78, 290, 1550, 1563, 1727
AcoI	YGGCCR	2 cut(s)	1011, 1223
AcsI	RAATTY	3 cut(s)	1114, 1293, 1756
AcuI	CTGAAG	2 cut(s)	566, 1170
AdeI	CACNNNGTG	1 cut(s)	1256
AfaI	GTAC	3 cut(s)	31, 906, 969
AfiI	CCNNNNNNNGG	4 cut(s)	396, 971, 1253, 1662
AjnI	CCWGG	1 cut(s)	1252
AjuI	GAANNNNNNNTTGG	2 cut(s)	821, 853
AleI	CACNNNNGTG	1 cut(s)	1395
Alw21I	GWGCWC	2 cut(s)	414, 1432
Alw26I	GTCTC	3 cut(s)	989, 1064, 1129
AlwI	GGATC	7 cut(s)	31, 65, 78, 290, 1550, 1563, 1727
AlwNI	CAGNNNCTG	1 cut(s)	1139
Aor13HI	TCCGGA	1 cut(s)	433
AoxI	GGCC	2 cut(s)	1011, 1223
ApeKI	GCWGC	9 cut(s)	158, 694, 779, 791, 886, 1159, 1302, 1305, 1769
ApoI	RAATTY	3 cut(s)	1114, 1293, 1756
Asp700I	GAANNNNTTC	1 cut(s)	1542
AspLEI	GCGC	4 cut(s)	891, 1630, 1690, 1728
AspS9I	GGNCC	1 cut(s)	1483
AsuHPI	GGTGA	5 cut(s)	157, 829, 986, 1004, 1595
AvaII	GGWCC	1 cut(s)	1483
BalI	TGGCCA	1 cut(s)	1013
BamHI	GGATCC	2 cut(s)	70, 1555
BanI	GGYRCC	2 cut(s)	121, 961
BanII	GRGCYC	1 cut(s)	1432
BbsI	GAAGAC	1 cut(s)	536
Bbv12I	GWGCWC	2 cut(s)	414, 1432
BbvCI	CCTCAGC	2 cut(s)	630, 813
BbvI	GCAGC	9 cut(s)	145, 681, 766, 778, 898, 1146, 1292, 1314, 1781
BccI	CCATC	1 cut(s)	677
BciT130I	CCWGG	1 cut(s)	1254
BclI	TGATCA	1 cut(s)	1819
BcoDI	GTCTC	3 cut(s)	989, 1064, 1129
BfaI	CTAG	4 cut(s)	534, 557, 668, 956
BisI	GCNGC	9 cut(s)	159, 695, 780, 792, 887, 1160, 1303, 1306, 1770
BlsI	GCNGC	9 cut(s)	160, 696, 781, 793, 888, 1161, 1304, 1307, 1771
Bme1390I	CCNGG	1 cut(s)	1254
Bme18I	GGWCC	1 cut(s)	1483
BmgT120I	GGNCC	1 cut(s)	1483
BmiI	GGNNCC	6 cut(s)	72, 123, 963, 1232, 1485, 1557
BmrFI	CCNGG	1 cut(s)	1254
BmsI	GCATC	3 cut(s)	100, 870, 1189
BoxI	GACNNNNGTC	1 cut(s)	1214
BpiI	GAAGAC	1 cut(s)	536
BplI	GAGNNNNNCTC	2 cut(s)	745, 777
Bpu10I	CCTNAGC	3 cut(s)	585, 630, 813
BpuEI	CTTGAG	1 cut(s)	1088
BsaAI	YACGTR	2 cut(s)	29, 178
BsaBI	GATNNNNATC	1 cut(s)	41
BsaI	GGTCTC	2 cut(s)	989, 1064
BsaJI	CCNNGG	3 cut(s)	766, 1090, 1226
BsaWI	WCCGGW	1 cut(s)	433
Bsc4I	CCNNNNNNNGG	4 cut(s)	396, 971, 1253, 1662
Bse1I	ACTGG	3 cut(s)	965, 1014, 1585
Bse3DI	GCAATG	2 cut(s)	475, 1308
Bse8I	GATNNNNATC	1 cut(s)	41
BseAI	TCCGGA	1 cut(s)	433
BseBI	CCWGG	1 cut(s)	1254
BseDI	CCNNGG	3 cut(s)	766, 1090, 1226
BseGI	GGATG	2 cut(s)	115, 1204
BseJI	GATNNNNATC	1 cut(s)	41
BseLI	CCNNNNNNNGG	4 cut(s)	396, 971, 1253, 1662
BseMI	GCAATG	2 cut(s)	475, 1308
BseMII	CTCAG	4 cut(s)	315, 621, 642, 804
BseNI	ACTGG	3 cut(s)	965, 1014, 1585
BseRI	GAGGAG	7 cut(s)	575, 578, 620, 623, 647, 944, 1124
BseXI	GCAGC	9 cut(s)	145, 681, 766, 778, 898, 1146, 1292, 1314, 1781
BsgI	GTGCAG	4 cut(s)	777, 905, 936, 1233
BshFI	GGCC	2 cut(s)	1013, 1225
BshNI	GGYRCC	2 cut(s)	121, 961
BsiHKAI	GWGCWC	2 cut(s)	414, 1432
BsiSI	CCGG	2 cut(s)	434, 1685
BslFI	GGGAC	4 cut(s)	233, 691, 1222, 1469
BslI	CCNNNNNNNGG	4 cut(s)	396, 971, 1253, 1662
BsmAI	GTCTC	3 cut(s)	989, 1064, 1129
BsmFI	GGGAC	4 cut(s)	233, 691, 1222, 1469
BsmI	GAATGC	1 cut(s)	1680
BsnI	GGCC	2 cut(s)	1013, 1225
Bso31I	GGTCTC	2 cut(s)	989, 1064
Bsp1286I	GDGCHC	2 cut(s)	414, 1432
Bsp13I	TCCGGA	1 cut(s)	433
Bsp143I	GATC	6 cut(s)	36, 70, 282, 1555, 1719, 1819
Bsp19I	CCATGG	1 cut(s)	1090
BspACI	CCGC	1 cut(s)	782
BspANI	GGCC	2 cut(s)	1013, 1225
BspCNI	CTCAG	4 cut(s)	316, 622, 643, 805
BspEI	TCCGGA	1 cut(s)	433
BspLI	GGNNCC	6 cut(s)	72, 123, 963, 1232, 1485, 1557
BspPI	GGATC	7 cut(s)	31, 65, 78, 290, 1550, 1563, 1727
BspT107I	GGYRCC	2 cut(s)	121, 961
BspTNI	GGTCTC	2 cut(s)	989, 1064
BsrDI	GCAATG	2 cut(s)	475, 1308
BsrI	ACTGG	3 cut(s)	965, 1014, 1585
BssECI	CCNNGG	3 cut(s)	766, 1090, 1226
BssMI	GATC	6 cut(s)	36, 70, 282, 1555, 1719, 1819
BssT1I	CCWWGG	2 cut(s)	766, 1090
Bst2UI	CCWGG	1 cut(s)	1254
Bst4CI	ACNGT	5 cut(s)	724, 909, 1024, 1051, 1141
Bst6I	CTCTTC	3 cut(s)	867, 921, 972
BstBAI	YACGTR	2 cut(s)	29, 178
BstC8I	GCNNGC	2 cut(s)	1432, 1678
BstDEI	CTNAG	7 cut(s)	324, 585, 630, 651, 813, 1353, 1435
BstDSI	CCRYGG	1 cut(s)	1090
BstF5I	GGATG	2 cut(s)	115, 1204
BstHHI	GCGC	4 cut(s)	891, 1630, 1690, 1728
BstKTI	GATC	6 cut(s)	39, 73, 285, 1558, 1722, 1822
BstMAI	GTCTC	3 cut(s)	989, 1064, 1129
BstMBI	GATC	6 cut(s)	36, 70, 282, 1555, 1719, 1819
BstMWI	GCNNNNNNNGC	5 cut(s)	130, 190, 788, 959, 1838
BstNI	CCWGG	1 cut(s)	1254
BstNSI	RCATGY	1 cut(s)	1850
BstPAI	GACNNNNGTC	1 cut(s)	1214
BstSCI	CCNGG	1 cut(s)	1252
BstV1I	GCAGC	9 cut(s)	145, 681, 766, 778, 898, 1146, 1292, 1314, 1781
BstV2I	GAAGAC	1 cut(s)	536
BstX2I	RGATCY	3 cut(s)	36, 70, 1555
BstYI	RGATCY	3 cut(s)	36, 70, 1555
BsuRI	GGCC	2 cut(s)	1013, 1225
BtgI	CCRYGG	1 cut(s)	1090
BtsCI	GGATG	2 cut(s)	115, 1204
BtsI	GCAGTG	2 cut(s)	898, 948
BtsIMutI	CAGTG	4 cut(s)	898, 948, 1063, 1578
Cac8I	GCNNGC	2 cut(s)	1432, 1678
CaiI	CAGNNNCTG	1 cut(s)	1139
CfoI	GCGC	4 cut(s)	891, 1630, 1690, 1728
Cfr13I	GGNCC	1 cut(s)	1483
CsiI	ACCWGGT	1 cut(s)	1252
Csp6I	GTAC	3 cut(s)	30, 905, 968
CviQI	GTAC	3 cut(s)	30, 905, 968
DdeI	CTNAG	7 cut(s)	324, 585, 630, 651, 813, 1353, 1435
DpnI	GATC	6 cut(s)	38, 72, 284, 1557, 1721, 1821
DpnII	GATC	6 cut(s)	36, 70, 282, 1555, 1719, 1819
DraIII	CACNNNGTG	1 cut(s)	1256
EaeI	YGGCCR	2 cut(s)	1011, 1223
Eam1104I	CTCTTC	3 cut(s)	867, 921, 972
EarI	CTCTTC	3 cut(s)	867, 921, 972
Ecl136II	GAGCTC	1 cut(s)	1430
Eco130I	CCWWGG	2 cut(s)	766, 1090
Eco24I	GRGCYC	1 cut(s)	1432
Eco31I	GGTCTC	2 cut(s)	989, 1064
Eco47I	GGWCC	1 cut(s)	1483
Eco53kI	GAGCTC	1 cut(s)	1430
Eco57I	CTGAAG	2 cut(s)	566, 1170
EcoICRI	GAGCTC	1 cut(s)	1430
EcoRII	CCWGG	1 cut(s)	1252
EcoT14I	CCWWGG	2 cut(s)	766, 1090
EcoT22I	ATGCAT	1 cut(s)	115
EcoT38I	GRGCYC	1 cut(s)	1432
ErhI	CCWWGG	2 cut(s)	766, 1090
FalI	AAGNNNNNCTT	2 cut(s)	235, 267
FaqI	GGGAC	4 cut(s)	233, 691, 1222, 1469
FbaI	TGATCA	1 cut(s)	1819
FblI	GTMKAC	1 cut(s)	1062
Fnu4HI	GCNGC	9 cut(s)	159, 695, 780, 792, 887, 1160, 1303, 1306, 1770
FokI	GGATG	2 cut(s)	122, 1211
FriOI	GRGCYC	1 cut(s)	1432
Fsp4HI	GCNGC	9 cut(s)	159, 695, 780, 792, 887, 1160, 1303, 1306, 1770
FspAI	RTGCGCAY	1 cut(s)	1629
FspBI	CTAG	4 cut(s)	534, 557, 668, 956
FspI	TGCGCA	1 cut(s)	1629
GlaI	GCGC	4 cut(s)	890, 1629, 1689, 1727
GluI	GCNGC	9 cut(s)	159, 695, 780, 792, 887, 1160, 1303, 1306, 1770
HaeIII	GGCC	2 cut(s)	1013, 1225
HapII	CCGG	2 cut(s)	434, 1685
HhaI	GCGC	4 cut(s)	891, 1630, 1690, 1728
Hin6I	GCGC	4 cut(s)	889, 1628, 1688, 1726
HinP1I	GCGC	4 cut(s)	889, 1628, 1688, 1726
HincII	GTYRAC	1 cut(s)	1063
HindII	GTYRAC	1 cut(s)	1063
HindIII	AAGCTT	1 cut(s)	1152
HinfI	GANTC	5 cut(s)	98, 430, 704, 1525, 1572
HpaII	CCGG	2 cut(s)	434, 1685
HphI	GGTGA	5 cut(s)	157, 829, 986, 1004, 1595
Hpy166II	GTNNAC	1 cut(s)	1063
Hpy188I	TCNGA	2 cut(s)	241, 403
Hpy188III	TCNNGA	8 cut(s)	74, 434, 479, 744, 1148, 1529, 1601, 1862
Hpy8I	GTNNAC	1 cut(s)	1063
HpyCH4III	ACNGT	5 cut(s)	724, 909, 1024, 1051, 1141
HpyCH4IV	ACGT	3 cut(s)	28, 177, 1511
HpyF10VI	GCNNNNNNNGC	5 cut(s)	130, 190, 788, 959, 1838
HpyF3I	CTNAG	7 cut(s)	324, 585, 630, 651, 813, 1353, 1435
HpySE526I	ACGT	3 cut(s)	28, 177, 1511
HspAI	GCGC	4 cut(s)	889, 1628, 1688, 1726
Kpn2I	TCCGGA	1 cut(s)	433
Ksp22I	TGATCA	1 cut(s)	1819
Kzo9I	GATC	6 cut(s)	36, 70, 282, 1555, 1719, 1819
LmnI	GCTCC	2 cut(s)	436, 691
Lsp1109I	GCAGC	9 cut(s)	145, 681, 766, 778, 898, 1146, 1292, 1314, 1781
LweI	GCATC	3 cut(s)	100, 870, 1189
MabI	ACCWGGT	1 cut(s)	1252
MaeI	CTAG	4 cut(s)	534, 557, 668, 956
MaeII	ACGT	3 cut(s)	28, 177, 1511
MaeIII	GTNAC	3 cut(s)	227, 718, 946
MalI	GATC	6 cut(s)	38, 72, 284, 1557, 1721, 1821
MboI	GATC	6 cut(s)	36, 70, 282, 1555, 1719, 1819
MflI	RGATCY	3 cut(s)	36, 70, 1555
MhlI	GDGCHC	2 cut(s)	414, 1432
MlsI	TGGCCA	1 cut(s)	1013
MluNI	TGGCCA	1 cut(s)	1013
MlyI	GAGTC	2 cut(s)	713, 1566
MmeI	TCCRAC	2 cut(s)	1269, 1442
Mox20I	TGGCCA	1 cut(s)	1013
Mph1103I	ATGCAT	1 cut(s)	115
MroI	TCCGGA	1 cut(s)	433
MroXI	GAANNNNTTC	1 cut(s)	1542
MscI	TGGCCA	1 cut(s)	1013
MseI	TTAA	7 cut(s)	135, 359, 729, 845, 911, 1562, 1614
MslI	CAYNNNNRTG	2 cut(s)	17, 1395
Msp20I	TGGCCA	1 cut(s)	1013
MspA1I	CMGCKG	1 cut(s)	1305
MspI	CCGG	2 cut(s)	434, 1685
MspR9I	CCNGG	1 cut(s)	1254
Mva1269I	GAATGC	1 cut(s)	1680
MvaI	CCWGG	1 cut(s)	1254
MwoI	GCNNNNNNNGC	5 cut(s)	130, 190, 788, 959, 1838
NcoI	CCATGG	1 cut(s)	1090
NdeII	GATC	6 cut(s)	36, 70, 282, 1555, 1719, 1819
NlaIV	GGNNCC	6 cut(s)	72, 123, 963, 1232, 1485, 1557
NmeAIII	GCCGAG	2 cut(s)	271, 1251
NmuCI	GTSAC	3 cut(s)	227, 718, 946
NsbI	TGCGCA	1 cut(s)	1629
NsiI	ATGCAT	1 cut(s)	115
NspI	RCATGY	1 cut(s)	1850
OliI	CACNNNNGTG	1 cut(s)	1395
PctI	GAATGC	1 cut(s)	1680
PdmI	GAANNNNTTC	1 cut(s)	1542
PfeI	GAWTC	3 cut(s)	98, 430, 1525
PflFI	GACNNNGTC	2 cut(s)	1367, 1513
PflMI	CCANNNNNTGG	2 cut(s)	971, 1662
PkrI	GCNGC	9 cut(s)	160, 696, 781, 793, 888, 1161, 1304, 1307, 1771
PleI	GAGTC	2 cut(s)	712, 1566
PpsI	GAGTC	2 cut(s)	712, 1566
Ppu21I	YACGTR	2 cut(s)	29, 178
PshAI	GACNNNNGTC	1 cut(s)	1214
Psp124BI	GAGCTC	1 cut(s)	1432
Psp6I	CCWGG	1 cut(s)	1252
PspGI	CCWGG	1 cut(s)	1252
PspN4I	GGNNCC	6 cut(s)	72, 123, 963, 1232, 1485, 1557
PspPI	GGNCC	1 cut(s)	1483
PstNI	CAGNNNCTG	1 cut(s)	1139
PsuI	RGATCY	3 cut(s)	36, 70, 1555
PsyI	GACNNNGTC	2 cut(s)	1367, 1513
PvuII	CAGCTG	1 cut(s)	1305
RsaI	GTAC	3 cut(s)	31, 906, 969
RsaNI	GTAC	3 cut(s)	30, 905, 968
RseI	CAYNNNNRTG	2 cut(s)	17, 1395
SacI	GAGCTC	1 cut(s)	1432
SalI	GTCGAC	1 cut(s)	1061
SaqAI	TTAA	7 cut(s)	135, 359, 729, 845, 911, 1562, 1614
SatI	GCNGC	9 cut(s)	159, 695, 780, 792, 887, 1160, 1303, 1306, 1770
Sau3AI	GATC	6 cut(s)	36, 70, 282, 1555, 1719, 1819
Sau96I	GGNCC	1 cut(s)	1483
SchI	GAGTC	2 cut(s)	713, 1566
ScrFI	CCNGG	1 cut(s)	1254
SduI	GDGCHC	2 cut(s)	414, 1432
SexAI	ACCWGGT	1 cut(s)	1252
SfaNI	GCATC	3 cut(s)	100, 870, 1189
SinI	GGWCC	1 cut(s)	1483
SmiMI	CAYNNNNRTG	2 cut(s)	17, 1395
SmlI	CTYRAG	1 cut(s)	1067
SmoI	CTYRAG	1 cut(s)	1067
SsiI	CCGC	1 cut(s)	782
SspI	AATATT	1 cut(s)	805
SspMI	CTAG	4 cut(s)	534, 557, 668, 956
SstI	GAGCTC	1 cut(s)	1432
StyD4I	CCNGG	1 cut(s)	1252
StyI	CCWWGG	2 cut(s)	766, 1090
TaaI	ACNGT	5 cut(s)	724, 909, 1024, 1051, 1141
TaiI	ACGT	3 cut(s)	31, 180, 1514
TaqI	TCGA	3 cut(s)	681, 864, 1062
TatI	WGTACW	1 cut(s)	967
TfiI	GAWTC	3 cut(s)	98, 430, 1525
Tru1I	TTAA	7 cut(s)	135, 359, 729, 845, 911, 1562, 1614
Tru9I	TTAA	7 cut(s)	135, 359, 729, 845, 911, 1562, 1614
TscAI	CASTG	4 cut(s)	898, 955, 1063, 1585
TseFI	GTSAC	3 cut(s)	227, 718, 946
TseI	GCWGC	9 cut(s)	158, 694, 779, 791, 886, 1159, 1302, 1305, 1769
Tsp45I	GTSAC	3 cut(s)	227, 718, 946
TspDTI	ATGAA	8 cut(s)	93, 141, 867, 1373, 1441, 1540, 1548, 1748
TspGWI	ACGGA	2 cut(s)	122, 1548
TspRI	CASTG	4 cut(s)	898, 955, 1063, 1585
Tth111I	GACNNNGTC	2 cut(s)	1367, 1513
Van91I	CCANNNNNTGG	2 cut(s)	971, 1662
VpaK11BI	GGWCC	1 cut(s)	1483
XapI	RAATTY	3 cut(s)	1114, 1293, 1756
XceI	RCATGY	1 cut(s)	1850
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1006, 1021, 1549
XmiI	GTMKAC	1 cut(s)	1062
XmnI	GAANNNNTTC	1 cut(s)	1542
XspI	CTAG	4 cut(s)	534, 557, 668, 956
Zsp2I	ATGCAT	1 cut(s)	115

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.