Prupe.8G265100_v2.0.a1

Belongs to the eukaryotic ribosomal protein eL19 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
22212889 .. 22215077
2189 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G265100.1

Sequence Viewer

Length: 639 bp
ATGGTTTCGCTCAAGCTCCAGAAGAGGCTCGCCGCGAGCGTGCTCAAGTGTGGTCGCGGCAAGGTCTGGCTCGACCCCAATGAAGTCAGCGACATCTCCATGGCCAATTCTCGCCAAAACATACGGAAGTTGGTCAAGGATGGTTTCATCATCAGGAAGCCAACCAAGATCCACTCTCGATCTCGTGCACGCCGCATGAAGGAGGCTAAGAGGAAGGGGCGTCACTCTGGACATGGTAAGCGTAAGGGTACAAGGGAGGCAAGGCTTCCTACCAAGATCCTGTGGATGCGGAGGATGCGTGTGCTCAGGCGTTTGCTTCGCAAGTACAGGGAATCAAAGAAGATTGACAAGCACATGTACCATGACATGTACATGAAGGTTAAGGGTAATGTTTTCAAGAATAAAAGAGTCCTCATGGAGAGCATCCACAAGTCAAAGGCTGAGAAGGCGAGAGAGAAGACTCTGTCTGATCAGTTTGAGGCTAAGCGGGCAAAGAACAAGGCTAGCAGGGAAAGGAAACATGCTAGGAGGGAGGAACGCTTGGCTCAGGGACCTGGAGAGAGAGCACCGCCAGCTGCTGAGCCAGCTGCTGTTGCCCCTTCTCAACCAACACAGGGATCTAAGAAATCCAAGAAGTGA

Protein Analysis

213

Amino Acids

24.66

Weight (kDa)

11.5

Isoelectric Point (pI)

55.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 35, 57
AciI CCGC 6 cut(s) 33, 57, 193, 289, 487, 569
AclWI GGATC 3 cut(s) 163, 271, 625
AcoI YGGCCR 1 cut(s) 102
AcyI GRCGYC 1 cut(s) 220
AfaI GTAC 4 cut(s) 250, 326, 359, 371
AfiI CCNNNNNNNGG 2 cut(s) 199, 614
AflIII ACRYGT 2 cut(s) 354, 366
AgsI TTSAA 1 cut(s) 397
AjnI CCWGG 1 cut(s) 553
AluBI AGCT 3 cut(s) 16, 575, 587
AluI AGCT 3 cut(s) 16, 575, 587
Alw21I GWGCWC 4 cut(s) 45, 190, 306, 568
Alw44I GTGCAC 1 cut(s) 186
AlwI GGATC 3 cut(s) 163, 271, 625
AlwNI CAGNNNCTG 2 cut(s) 578, 590
AoxI GGCC 1 cut(s) 102
ApaLI GTGCAC 1 cut(s) 186
ApeKI GCWGC 2 cut(s) 575, 587
AspS9I GGNCC 1 cut(s) 551
AsuNHI GCTAGC 1 cut(s) 503
AvaII GGWCC 1 cut(s) 551
BaeGI GKGCMC 1 cut(s) 190
BalI TGGCCA 1 cut(s) 104
BauI CACGAG 1 cut(s) 183
BbsI GAAGAC 1 cut(s) 464
Bbv12I GWGCWC 4 cut(s) 45, 190, 306, 568
BbvI GCAGC 2 cut(s) 562, 574
BccI CCATC 1 cut(s) 134
BciT130I CCWGG 1 cut(s) 555
BclI TGATCA 1 cut(s) 469
BfaI CTAG 2 cut(s) 504, 525
BisI GCNGC 5 cut(s) 33, 58, 193, 576, 588
BlpI GCTNAGC 2 cut(s) 483, 579
BlsI GCNGC 5 cut(s) 34, 59, 194, 577, 589
Bme1390I CCNGG 1 cut(s) 555
Bme18I GGWCC 1 cut(s) 551
BmgT120I GGNCC 1 cut(s) 551
BmiI GGNNCC 1 cut(s) 552
BmrFI CCNGG 1 cut(s) 555
BmsI GCATC 3 cut(s) 276, 285, 432
BmtI GCTAGC 1 cut(s) 507
BpiI GAAGAC 1 cut(s) 464
BpmI CTGGAG 1 cut(s) 576
Bpu10I CCTNAGC 2 cut(s) 305, 546
Bpu1102I GCTNAGC 2 cut(s) 483, 579
BpuEI CTTGAG 1 cut(s) 29
BsaHI GRCGYC 1 cut(s) 220
BsaJI CCNNGG 1 cut(s) 99
BsaXI ACNNNNNCTCC 2 cut(s) 283, 313
Bsc4I CCNNNNNNNGG 2 cut(s) 199, 614
BseBI CCWGG 1 cut(s) 555
BseDI CCNNGG 1 cut(s) 99
BseGI GGATG 4 cut(s) 145, 291, 300, 423
BseLI CCNNNNNNNGG 2 cut(s) 199, 614
BseMII CTCAG 4 cut(s) 319, 432, 560, 570
BseSI GKGCMC 1 cut(s) 190
BseXI GCAGC 2 cut(s) 562, 574
Bsh1236I CGCG 2 cut(s) 35, 57
BshFI GGCC 1 cut(s) 104
BsiHKAI GWGCWC 4 cut(s) 45, 190, 306, 568
BslFI GGGAC 1 cut(s) 564
BslI CCNNNNNNNGG 2 cut(s) 199, 614
BsmFI GGGAC 1 cut(s) 564
BsnI GGCC 1 cut(s) 104
Bsp1286I GDGCHC 4 cut(s) 45, 190, 306, 568
Bsp1407I TGTACA 1 cut(s) 369
Bsp143I GATC 5 cut(s) 168, 179, 276, 469, 617
Bsp1720I GCTNAGC 2 cut(s) 483, 579
Bsp19I CCATGG 1 cut(s) 99
BspACI CCGC 6 cut(s) 33, 57, 193, 289, 487, 569
BspANI GGCC 1 cut(s) 104
BspCNI CTCAG 4 cut(s) 318, 433, 559, 571
BspFNI CGCG 2 cut(s) 35, 57
BspLI GGNNCC 1 cut(s) 552
BspOI GCTAGC 1 cut(s) 507
BspPI GGATC 3 cut(s) 163, 271, 625
BsrGI TGTACA 1 cut(s) 369
BssECI CCNNGG 1 cut(s) 99
BssMI GATC 5 cut(s) 168, 179, 276, 469, 617
BssNI GRCGYC 1 cut(s) 220
BssSI CACGAG 1 cut(s) 183
BssT1I CCWWGG 1 cut(s) 99
Bst2BI CACGAG 1 cut(s) 183
Bst2UI CCWGG 1 cut(s) 555
Bst6I CTCTTC 1 cut(s) 17
BstACI GRCGYC 1 cut(s) 220
BstAUI TGTACA 1 cut(s) 369
BstC8I GCNNGC 8 cut(s) 30, 37, 41, 190, 489, 505, 573, 585
BstDEI CTNAG 7 cut(s) 207, 305, 441, 483, 546, 579, 621
BstDSI CCRYGG 1 cut(s) 99
BstF5I GGATG 4 cut(s) 145, 291, 300, 423
BstFNI CGCG 2 cut(s) 35, 57
BstKTI GATC 5 cut(s) 171, 182, 279, 472, 620
BstMBI GATC 5 cut(s) 168, 179, 276, 469, 617
BstMWI GCNNNNNNNGC 6 cut(s) 295, 446, 488, 572, 584, 593
BstNI CCWGG 1 cut(s) 555
BstNSI RCATGY 3 cut(s) 358, 370, 524
BstSCI CCNGG 1 cut(s) 553
BstSLI GKGCMC 1 cut(s) 190
BstUI CGCG 2 cut(s) 35, 57
BstV1I GCAGC 2 cut(s) 562, 574
BstV2I GAAGAC 1 cut(s) 464
BstX2I RGATCY 3 cut(s) 168, 276, 617
BstYI RGATCY 3 cut(s) 168, 276, 617
BsuRI GGCC 1 cut(s) 104
BtgI CCRYGG 1 cut(s) 99
BtsCI GGATG 4 cut(s) 145, 291, 300, 423
Cac8I GCNNGC 8 cut(s) 30, 37, 41, 190, 489, 505, 573, 585
CaiI CAGNNNCTG 2 cut(s) 578, 590
Cfr13I GGNCC 1 cut(s) 551
CseI GACGC 1 cut(s) 209
Csp6I GTAC 4 cut(s) 249, 325, 358, 370
CviAII CATG 9 cut(s) 100, 196, 233, 355, 362, 367, 373, 415, 521
CviQI GTAC 4 cut(s) 249, 325, 358, 370
DdeI CTNAG 7 cut(s) 207, 305, 441, 483, 546, 579, 621
DpnI GATC 5 cut(s) 170, 181, 278, 471, 619
DpnII GATC 5 cut(s) 168, 179, 276, 469, 617
EaeI YGGCCR 1 cut(s) 102
Eam1104I CTCTTC 1 cut(s) 17
EarI CTCTTC 1 cut(s) 17
Eco130I CCWWGG 1 cut(s) 99
Eco47I GGWCC 1 cut(s) 551
EcoO109I RGGNCCY 1 cut(s) 551
EcoRII CCWGG 1 cut(s) 553
EcoT14I CCWWGG 1 cut(s) 99
ErhI CCWWGG 1 cut(s) 99
FaeI CATG 9 cut(s) 103, 199, 236, 358, 365, 370, 376, 418, 524
FaqI GGGAC 1 cut(s) 564
FatI CATG 9 cut(s) 99, 195, 232, 354, 361, 366, 372, 414, 520
FauI CCCGC 1 cut(s) 480
FbaI TGATCA 1 cut(s) 469
Fnu4HI GCNGC 5 cut(s) 33, 58, 193, 576, 588
FokI GGATG 4 cut(s) 152, 298, 307, 410
Fsp4HI GCNGC 5 cut(s) 33, 58, 193, 576, 588
FspBI CTAG 2 cut(s) 504, 525
GluI GCNGC 5 cut(s) 33, 58, 193, 576, 588
GsuI CTGGAG 1 cut(s) 576
HaeIII GGCC 1 cut(s) 104
HgaI GACGC 1 cut(s) 209
Hin1I GRCGYC 1 cut(s) 220
Hin1II CATG 9 cut(s) 103, 199, 236, 358, 365, 370, 376, 418, 524
HinfI GANTC 3 cut(s) 332, 408, 460
Hpy166II GTNNAC 1 cut(s) 188
Hpy188I TCNGA 1 cut(s) 469
Hpy188III TCNNGA 5 cut(s) 19, 154, 177, 228, 397
Hpy8I GTNNAC 1 cut(s) 188
HpyAV CCTTC 5 cut(s) 193, 208, 370, 439, 609
HpyCH4V TGCA 1 cut(s) 188
HpyF10VI GCNNNNNNNGC 6 cut(s) 295, 446, 488, 572, 584, 593
HpyF3I CTNAG 7 cut(s) 207, 305, 441, 483, 546, 579, 621
Hsp92I GRCGYC 1 cut(s) 220
Hsp92II CATG 9 cut(s) 103, 199, 236, 358, 365, 370, 376, 418, 524
Ksp22I TGATCA 1 cut(s) 469
Kzo9I GATC 5 cut(s) 168, 179, 276, 469, 617
LmnI GCTCC 1 cut(s) 21
Lsp1109I GCAGC 2 cut(s) 562, 574
LweI GCATC 3 cut(s) 276, 285, 432
MaeI CTAG 2 cut(s) 504, 525
MaeIII GTNAC 1 cut(s) 221
MalI GATC 5 cut(s) 170, 181, 278, 471, 619
MboI GATC 5 cut(s) 168, 179, 276, 469, 617
MboII GAAGA 3 cut(s) 34, 352, 469
MflI RGATCY 3 cut(s) 168, 276, 617
MhlI GDGCHC 4 cut(s) 45, 190, 306, 568
MlsI TGGCCA 1 cut(s) 104
MluCI AATT 1 cut(s) 106
MluNI TGGCCA 1 cut(s) 104
MlyI GAGTC 2 cut(s) 417, 454
MnlI CCTC 9 cut(s) 18, 196, 204, 250, 285, 422, 472, 522, 526
Mox20I TGGCCA 1 cut(s) 104
MscI TGGCCA 1 cut(s) 104
MseI TTAA 1 cut(s) 381
MslI CAYNNNNRTG 2 cut(s) 98, 371
Msp20I TGGCCA 1 cut(s) 104
MspA1I CMGCKG 2 cut(s) 575, 587
MspR9I CCNGG 1 cut(s) 555
MvaI CCWGG 1 cut(s) 555
MvnI CGCG 2 cut(s) 35, 57
MwoI GCNNNNNNNGC 6 cut(s) 295, 446, 488, 572, 584, 593
NcoI CCATGG 1 cut(s) 99
NdeII GATC 5 cut(s) 168, 179, 276, 469, 617
NheI GCTAGC 1 cut(s) 503
NlaIII CATG 9 cut(s) 103, 199, 236, 358, 365, 370, 376, 418, 524
NlaIV GGNNCC 1 cut(s) 552
NmuCI GTSAC 1 cut(s) 221
NspI RCATGY 3 cut(s) 358, 370, 524
PciI ACATGT 2 cut(s) 354, 366
PcsI WCGNNNNNNNCGW 1 cut(s) 36
PfeI GAWTC 1 cut(s) 332
PflFI GACNNNGTC 1 cut(s) 463
PkrI GCNGC 5 cut(s) 34, 59, 194, 577, 589
PleI GAGTC 2 cut(s) 416, 454
PpsI GAGTC 2 cut(s) 416, 454
PpuMI RGGWCCY 1 cut(s) 551
PscI ACATGT 2 cut(s) 354, 366
Psp5II RGGWCCY 1 cut(s) 551
Psp6I CCWGG 1 cut(s) 553
PspGI CCWGG 1 cut(s) 553
PspN4I GGNNCC 1 cut(s) 552
PspPI GGNCC 1 cut(s) 551
PspPPI RGGWCCY 1 cut(s) 551
PstNI CAGNNNCTG 2 cut(s) 578, 590
PsuI RGATCY 3 cut(s) 168, 276, 617
PsyI GACNNNGTC 1 cut(s) 463
PvuII CAGCTG 2 cut(s) 575, 587
RsaI GTAC 4 cut(s) 250, 326, 359, 371
RsaNI GTAC 4 cut(s) 249, 325, 358, 370
RseI CAYNNNNRTG 2 cut(s) 98, 371
SaqAI TTAA 1 cut(s) 381
SatI GCNGC 5 cut(s) 33, 58, 193, 576, 588
Sau3AI GATC 5 cut(s) 168, 179, 276, 469, 617
Sau96I GGNCC 1 cut(s) 551
SchI GAGTC 2 cut(s) 417, 454
ScrFI CCNGG 1 cut(s) 555
SduI GDGCHC 4 cut(s) 45, 190, 306, 568
SetI ASST 6 cut(s) 18, 66, 381, 556, 577, 589
SfaNI GCATC 3 cut(s) 276, 285, 432
SinI GGWCC 1 cut(s) 551
SmiMI CAYNNNNRTG 2 cut(s) 98, 371
SmlI CTYRAG 2 cut(s) 11, 44
SmoI CTYRAG 2 cut(s) 11, 44
Sse9I AATT 1 cut(s) 106
SsiI CCGC 6 cut(s) 33, 57, 193, 289, 487, 569
SspMI CTAG 2 cut(s) 504, 525
StyD4I CCNGG 1 cut(s) 553
StyI CCWWGG 1 cut(s) 99
TaqI TCGA 2 cut(s) 72, 178
TasI AATT 1 cut(s) 106
TatI WGTACW 2 cut(s) 324, 369
TauI GCSGC 3 cut(s) 35, 60, 195
TfiI GAWTC 1 cut(s) 332
Tru1I TTAA 1 cut(s) 381
Tru9I TTAA 1 cut(s) 381
TseFI GTSAC 1 cut(s) 221
TseI GCWGC 2 cut(s) 575, 587
Tsp45I GTSAC 1 cut(s) 221
TspDTI ATGAA 4 cut(s) 96, 136, 212, 389
TspGWI ACGGA 1 cut(s) 139
Tth111I GACNNNGTC 1 cut(s) 463
VneI GTGCAC 1 cut(s) 186
VpaK11BI GGWCC 1 cut(s) 551
XceI RCATGY 3 cut(s) 358, 370, 524
XspI CTAG 2 cut(s) 504, 525
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.