Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0004394

Physical Location & Seq

Genomic Coordinates Forward (+)

32830525 .. 32834125

Gene Structure 3601 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0189000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2049 bp

ATGGCGTCGGAGTTGAGACAATTGGAGGAGCAGAGGTTGCAAGAGCAACAAGAAACGTCGTCAACCCTGCTTCGGTTGATTAAACGCATGAAGAACATGGAGGAGAAGTTTCGGTCGACCCGAAATTCTGCCCAGGTCCGATGTCAAGAGTTGGAGGATCGGGAGAGGCGAATCGGAGATGAGACGAGCAAACTGGACGTGTTGAAGGCAGAGACGGAGAACAAAGCTGTGGAGCTTCGAAGCCTTGAGAAGCTGATCCAGGAGAGACAAGAAGAAGCTGTAAAAGGGGAGAGTCACTTAGAGTCGCTCAAGTTGTTAATCCAAGAACATGAAGAAGAACTGGAGTTTAAAGAGAAGCGGTTCTCGGATCTTGAGAGAATGATTGGTGTGAAGGAGGGAGAGTGCGAGTCGGTTCAGAAGAGAATGAAGGAGAGCTTGGAGAAACTGAATAGGGTTGAGAAGGAAATAGAAGAGAAGATTGAATTGAAACAAAAGCTAAGTAGGACAATGGAGGTGAAAGGGAAGGTGTTTTGTTTGCATAAGACATCAATGAAGGAGTGGTCGAGAAAGCTTGAAGTAAAAGGGAGGGAACTTGAAGAATTGTCCAAGAAGATTGAGTTGAAAGAAAAACAATTTGAACCGAGAGTGGAGGAGATTCGTTTGATTGAAAAAAGGGTAAATGAATGCCTGAATGAGATTGTATTGAAAGAAAGGCATCTTCAGTCACTCGAAAAATCAATTCAAGAGCGTGAAAATTTGTTAGAAGAACGGGAAAAGCGCTTAGATTCAGTCTCTCATGGACTTGAAATGAGAGAGAAGGAACTTGATCTAAAGGCCAAAGAACTTGAACTGAAGCAATATGAACGTGCACCAGCAAGTAATGTCATTTCTTCCCTTATCAAAGTTGGGGAACCAAAATCTTTACTAGCCAAAAAAGCAGCAGTTTCATCATCTTCTTCAAATCCTCAATTAAGTGACTCCTTAAATGCAAGGAATTTGCAGGGACAAGTGACTGGGAATGATTTTCTTGAGAACCAATTTTTTGATAATCTGCAAAGTTCATTAGACCCTGCAAAACTTGTGTTGGATTGGATGCAAACTTATCTCTCACAATATTGGACAAAAGGTGATGTTGGTTTTGAAGTAACTTCCATCAAAACCTACATTTCCCTATTAGAGCAGCTAACGAGACTCTCATCACAAGCCGGAGCTCAGGTGAAAGAGGGTGCAATGAAGTTGGCAGTCCAATGGAAAGCAAATATGAGAGCTGATACAGAGAATTCCTTGGAAATTTTGGGATTTTTGCACTTCATAGCTACATTTGGGTTGCTTTATACTCTAAATGTAGATGAAATTGTAAAGCTTCTTGGGATGATTTCTCAGCATAAAGAGGCTCTAGAATTATGTCAGACACTTGATTTTGCAGATGAAATCCCTGAGTTTATCCAGACTCTTGTTGAAAGGAAGCAGCTGATGGAAGCCGTTGGATTGATTTGTACCTTCAAGATAAGTGACCAGTTTCCCCCCGGACCACTCCTAGAAGAATACATGGAGGAACAAATAAAGTGTTGCAGAATTGCTTACAAGAGAACCAAGTTATATAACGAAAAGGTTAGGATTGTGGACGACCAGATAACTCGTCTAAGAGCTGTGATTGACATGATCAAAAACCACAACTTGGAGTCGACGGAATGTGCATCAACAAACATTGAAATGCAAATAACTCGACTGCATCAAGTAAAGGAGAACTGGAGACTTCAGGCGGCGAATTTGGCAACTGTGCCAAAAAGAGGAATCAAACGTAGTAGCAGCACTCTTCCTACTGCGTTTGAACCCCAACAGCAGCCCAATAAAGTTCATCGGACAGCTGTAGCTGTTCCTCAGCCTCCTGCACTGCAAATTGACACCCCGATCCATCCTCAGTCAGATCCTTCATCTTTGCTGTTACATACGGGGCAGTTTGGCGCCGCTCAGAACACTGATATACACTACCCTCACTCTGGTAGTAGTCATCCCCAGTGGAACCACCCCAACCACTTTGGTAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005886 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015934 GO:0016020 GO:0019538 GO:0022625 GO:0022626 GO:0032991 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0071704 GO:0071944 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L19e

Protein Analysis

682

Amino Acids

78.85

Weight (kDa)

6.19

Isoelectric Point (pI)

49.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Frigida	PF07899	324 - 583	1.5e-48	Frigida-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004394)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02780 AT3G16780 AT4G02230
fragaria_vesca	FvH4_2g26110 FvH4_4g18800
malus_domestica	MD03G1292100.v1.1 MD11G1306300.v1.1 MD13G1162700.v1.1 MD16G1134200.v1.1 MD16G1162500.v1.1
prunus_persica	Prupe.1G130100_v2.0.a1 Prupe.1G130100_v2.0.a1 Prupe.8G265100_v2.0.a1
pyrus_communis	pycom03g23130 pycom11g26810 pycom13g13900 pycom16g13780
rosa_chinensis	RchiOBHm_Chr4g0423611 RchiOBHm_Chr6g0294481
rosa_laevigata	RLG00000011865
rosa_multiflora	Rmu_sc0000464.1_g000018
rosa_roxburghii	Rroxscaffold_5G00365820 Rroxscaffold_7G00173290
rosa_rugosa	Rorug04G0189000 Rorug06G0245000 Rorug06G0245100
rosa_samantha	Rh4AG248600 Rh4BG253900 Rh4CG261900 Rh6AG357600
rosa_wichuraiana	Rw4G021290 Rw6G031190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1964
AccB7I	CCANNNNNTGG	1 cut(s)	1678
AccBSI	CCGCTC	1 cut(s)	1970
AccI	GTMKAC	2 cut(s)	116, 1685
AciI	CCGC	3 cut(s)	358, 1763, 1968
AclWI	GGATC	5 cut(s)	165, 250, 375, 1906, 1922
AcsI	RAATTY	6 cut(s)	124, 754, 994, 1279, 1290, 1768
AcuI	CTGAAG	3 cut(s)	704, 872, 1742
AcyI	GRCGYC	2 cut(s)	5, 1965
AfaI	GTAC	1 cut(s)	1498
AfeI	AGCGCT	1 cut(s)	779
AfiI	CCNNNNNNNGG	4 cut(s)	72, 1678, 1790, 2000
AflIII	ACRYGT	1 cut(s)	198
AjiI	CACGTC	1 cut(s)	199
AjnI	CCWGG	2 cut(s)	132, 258
AjuI	GAANNNNNNNTTGG	2 cut(s)	419, 451
Alw21I	GWGCWC	2 cut(s)	871, 1213
Alw26I	GTCTC	7 cut(s)	10, 176, 206, 259, 796, 1183, 1747
Alw44I	GTGCAC	1 cut(s)	867
AlwI	GGATC	5 cut(s)	165, 250, 375, 1906, 1922
Aor51HI	AGCGCT	1 cut(s)	779
AoxI	GGCC	1 cut(s)	834
ApaLI	GTGCAC	1 cut(s)	867
ApeKI	GCWGC	5 cut(s)	938, 1180, 1468, 1809, 1843
ApoI	RAATTY	6 cut(s)	124, 754, 994, 1279, 1290, 1768
Asp700I	GAANNNNTTC	1 cut(s)	359
AspLEI	GCGC	2 cut(s)	780, 1967
AspS9I	GGNCC	2 cut(s)	136, 1529
AsuC2I	CCSGG	1 cut(s)	1527
AsuHPI	GGTGA	3 cut(s)	526, 1139, 1228
AsuII	TTCGAA	1 cut(s)	238
AvaII	GGWCC	2 cut(s)	136, 1529
BaeGI	GKGCMC	1 cut(s)	871
BanI	GGYRCC	1 cut(s)	1964
BanII	GRGCYC	1 cut(s)	1213
Bbv12I	GWGCWC	2 cut(s)	871, 1213
BbvCI	CCTCAGC	1 cut(s)	1881
BbvI	GCAGC	5 cut(s)	950, 1192, 1480, 1821, 1855
BccI	CCATC	3 cut(s)	1160, 1468, 1923
BceAI	ACGGC	1 cut(s)	1466
BcgI	CGANNNNNNTGC	2 cut(s)	1706, 1740
BciT130I	CCWGG	2 cut(s)	134, 260
BclI	TGATCA	1 cut(s)	1662
BcnI	CCSGG	1 cut(s)	1527
BcoDI	GTCTC	7 cut(s)	10, 176, 206, 259, 796, 1183, 1747
BfaI	CTAG	3 cut(s)	926, 1397, 1538
BfmI	CTRYAG	1 cut(s)	1869
BfoI	RGCGCY	2 cut(s)	781, 1968
BisI	GCNGC	7 cut(s)	939, 1181, 1469, 1764, 1810, 1844, 1968
BlsI	GCNGC	7 cut(s)	940, 1182, 1470, 1765, 1811, 1845, 1969
Bme1390I	CCNGG	3 cut(s)	134, 260, 1527
Bme18I	GGWCC	2 cut(s)	136, 1529
BmgBI	CACGTC	1 cut(s)	199
BmgT120I	GGNCC	2 cut(s)	136, 1529
BmiI	GGNNCC	3 cut(s)	912, 1966, 2024
BmrFI	CCNGG	3 cut(s)	134, 260, 1527
BmrI	ACTGGG	2 cut(s)	1023, 2011
BmsI	GCATC	4 cut(s)	724, 1083, 1706, 1741
BmuI	ACTGGG	2 cut(s)	1023, 2011
BpmI	CTGGAG	2 cut(s)	362, 1771
Bpu10I	CCTNAGC	2 cut(s)	1212, 1881
Bpu14I	TTCGAA	1 cut(s)	238
BpuEI	CTTGAG	4 cut(s)	266, 293, 392, 1049
BpuMI	CCSGG	1 cut(s)	1527
BsaHI	GRCGYC	2 cut(s)	5, 1965
BsaJI	CCNNGG	3 cut(s)	132, 1284, 1525
BsaXI	ACNNNNNCTCC	8 cut(s)	20, 50, 92, 122, 386, 416, 1200, 1230
Bsc4I	CCNNNNNNNGG	4 cut(s)	72, 1678, 1790, 2000
Bse1I	ACTGG	6 cut(s)	198, 345, 1018, 1516, 1754, 2017
Bse3DI	GCAATG	1 cut(s)	1236
BseBI	CCWGG	2 cut(s)	134, 260
BseDI	CCNNGG	3 cut(s)	132, 1284, 1525
BseGI	GGATG	4 cut(s)	1098, 1377, 1915, 2011
BseLI	CCNNNNNNNGG	4 cut(s)	72, 1678, 1790, 2000
BseMI	GCAATG	1 cut(s)	1236
BseMII	CTCAG	6 cut(s)	1226, 1394, 1428, 1895, 1934, 1985
BseNI	ACTGG	6 cut(s)	198, 345, 1018, 1516, 1754, 2017
BseRI	GAGGAG	3 cut(s)	41, 116, 665
BseSI	GKGCMC	1 cut(s)	871
BseXI	GCAGC	5 cut(s)	950, 1192, 1480, 1821, 1855
BsgI	GTGCAG	1 cut(s)	1875
Bsh1285I	CGRYCG	1 cut(s)	116
BshFI	GGCC	1 cut(s)	836
BshNI	GGYRCC	1 cut(s)	1964
BsiEI	CGRYCG	1 cut(s)	116
BsiHKAI	GWGCWC	2 cut(s)	871, 1213
BsiSI	CCGG	2 cut(s)	1206, 1527
BslFI	GGGAC	1 cut(s)	1017
BslI	CCNNNNNNNGG	4 cut(s)	72, 1678, 1790, 2000
BsmAI	GTCTC	7 cut(s)	10, 176, 206, 259, 796, 1183, 1747
BsmBI	CGTCTC	2 cut(s)	176, 206
BsmFI	GGGAC	1 cut(s)	1017
BsmI	GAATGC	1 cut(s)	689
BsnI	GGCC	1 cut(s)	836
Bsp119I	TTCGAA	1 cut(s)	238
Bsp1286I	GDGCHC	2 cut(s)	871, 1213
Bsp143I	GATC	7 cut(s)	157, 255, 367, 826, 1662, 1911, 1927
BspACI	CCGC	3 cut(s)	358, 1763, 1968
BspANI	GGCC	1 cut(s)	836
BspCNI	CTCAG	6 cut(s)	1225, 1393, 1429, 1894, 1933, 1984
BspLI	GGNNCC	3 cut(s)	912, 1966, 2024
BspPI	GGATC	5 cut(s)	165, 250, 375, 1906, 1922
BspT104I	TTCGAA	1 cut(s)	238
BspT107I	GGYRCC	1 cut(s)	1964
BsrBI	CCGCTC	1 cut(s)	1970
BsrDI	GCAATG	1 cut(s)	1236
BsrI	ACTGG	6 cut(s)	198, 345, 1018, 1516, 1754, 2017
BssECI	CCNNGG	3 cut(s)	132, 1284, 1525
BssMI	GATC	7 cut(s)	157, 255, 367, 826, 1662, 1911, 1927
BssNI	GRCGYC	2 cut(s)	5, 1965
BssT1I	CCWWGG	1 cut(s)	1284
Bst2UI	CCWGG	2 cut(s)	134, 260
Bst4CI	ACNGT	1 cut(s)	1780
Bst6I	CTCTTC	3 cut(s)	413, 465, 1821
BstACI	GRCGYC	2 cut(s)	5, 1965
BstAPI	GCANNNNNTGC	1 cut(s)	37
BstBI	TTCGAA	1 cut(s)	238
BstF5I	GGATG	4 cut(s)	1098, 1377, 1915, 2011
BstH2I	RGCGCY	2 cut(s)	781, 1968
BstHHI	GCGC	2 cut(s)	780, 1967
BstKTI	GATC	7 cut(s)	160, 258, 370, 829, 1665, 1914, 1930
BstMAI	GTCTC	7 cut(s)	10, 176, 206, 259, 796, 1183, 1747
BstMBI	GATC	7 cut(s)	157, 255, 367, 826, 1662, 1911, 1927
BstMCI	CGRYCG	1 cut(s)	116
BstMWI	GCNNNNNNNGC	3 cut(s)	37, 935, 1772
BstNI	CCWGG	2 cut(s)	134, 260
BstSCI	CCNGG	3 cut(s)	132, 258, 1525
BstSFI	CTRYAG	1 cut(s)	1869
BstSLI	GKGCMC	1 cut(s)	871
BstV1I	GCAGC	5 cut(s)	950, 1192, 1480, 1821, 1855
BstX2I	RGATCY	2 cut(s)	367, 1927
BstYI	RGATCY	2 cut(s)	367, 1927
BsuRI	GGCC	1 cut(s)	836
BtrI	CACGTC	1 cut(s)	199
BtsCI	GGATG	4 cut(s)	1098, 1377, 1915, 2011
BtsI	GCAGTG	1 cut(s)	1892
BtsIMutI	CAGTG	3 cut(s)	1892, 1977, 2024
CfoI	GCGC	2 cut(s)	780, 1967
Cfr13I	GGNCC	2 cut(s)	136, 1529
Csp6I	GTAC	1 cut(s)	1497
CviAII	CATG	6 cut(s)	88, 97, 329, 797, 1549, 1660
CviQI	GTAC	1 cut(s)	1497
DinI	GGCGCC	1 cut(s)	1966
DpnI	GATC	7 cut(s)	159, 257, 369, 828, 1664, 1913, 1929
DpnII	GATC	7 cut(s)	157, 255, 367, 826, 1662, 1911, 1927
DraI	TTTAAA	1 cut(s)	349
Eam1104I	CTCTTC	3 cut(s)	413, 465, 1821
EarI	CTCTTC	3 cut(s)	413, 465, 1821
Ecl136II	GAGCTC	1 cut(s)	1211
Eco130I	CCWWGG	1 cut(s)	1284
Eco24I	GRGCYC	1 cut(s)	1213
Eco47I	GGWCC	2 cut(s)	136, 1529
Eco47III	AGCGCT	1 cut(s)	779
Eco53kI	GAGCTC	1 cut(s)	1211
Eco57I	CTGAAG	3 cut(s)	704, 872, 1742
EcoICRI	GAGCTC	1 cut(s)	1211
EcoRI	GAATTC	1 cut(s)	1279
EcoRII	CCWGG	2 cut(s)	132, 258
EcoT14I	CCWWGG	1 cut(s)	1284
EcoT38I	GRGCYC	1 cut(s)	1213
EgeI	GGCGCC	1 cut(s)	1966
EheI	GGCGCC	1 cut(s)	1966
ErhI	CCWWGG	1 cut(s)	1284
Esp3I	CGTCTC	2 cut(s)	176, 206
FaeI	CATG	6 cut(s)	91, 100, 332, 800, 1552, 1663
FalI	AAGNNNNNCTT	2 cut(s)	419, 451
FaqI	GGGAC	1 cut(s)	1017
FatI	CATG	6 cut(s)	87, 96, 328, 796, 1548, 1659
FbaI	TGATCA	1 cut(s)	1662
FblI	GTMKAC	2 cut(s)	116, 1685
Fnu4HI	GCNGC	7 cut(s)	939, 1181, 1469, 1764, 1810, 1844, 1968
FokI	GGATG	4 cut(s)	1105, 1384, 1902, 1998
FriOI	GRGCYC	1 cut(s)	1213
Fsp4HI	GCNGC	7 cut(s)	939, 1181, 1469, 1764, 1810, 1844, 1968
FspBI	CTAG	3 cut(s)	926, 1397, 1538
GlaI	GCGC	2 cut(s)	779, 1966
GluI	GCNGC	7 cut(s)	939, 1181, 1469, 1764, 1810, 1844, 1968
GsuI	CTGGAG	2 cut(s)	362, 1771
HaeII	RGCGCY	2 cut(s)	781, 1968
HaeIII	GGCC	1 cut(s)	836
HapII	CCGG	2 cut(s)	1206, 1527
HhaI	GCGC	2 cut(s)	780, 1967
Hin1I	GRCGYC	2 cut(s)	5, 1965
Hin1II	CATG	6 cut(s)	91, 100, 332, 800, 1552, 1663
Hin6I	GCGC	2 cut(s)	778, 1965
HinP1I	GCGC	2 cut(s)	778, 1965
HincII	GTYRAC	3 cut(s)	63, 117, 1686
HindII	GTYRAC	3 cut(s)	63, 117, 1686
HindIII	AAGCTT	2 cut(s)	569, 1361
HpaII	CCGG	2 cut(s)	1206, 1527
HphI	GGTGA	3 cut(s)	526, 1139, 1228
Hpy166II	GTNNAC	5 cut(s)	63, 117, 869, 1624, 1686
Hpy188I	TCNGA	9 cut(s)	10, 140, 176, 367, 417, 1410, 1863, 1927, 1974
Hpy188III	TCNNGA	9 cut(s)	146, 161, 371, 564, 743, 1028, 1397, 1447, 1504
Hpy8I	GTNNAC	5 cut(s)	63, 117, 869, 1624, 1686
Hpy99I	CGWCG	3 cut(s)	10, 61, 1690
HpyAV	CCTTC	9 cut(s)	199, 385, 421, 454, 517, 547, 811, 1510, 1941
HpyCH4III	ACNGT	1 cut(s)	1780
HpyCH4IV	ACGT	4 cut(s)	56, 198, 865, 1801
HpyF10VI	GCNNNNNNNGC	3 cut(s)	37, 935, 1772
HpySE526I	ACGT	4 cut(s)	56, 198, 865, 1801
Hsp92I	GRCGYC	2 cut(s)	5, 1965
Hsp92II	CATG	6 cut(s)	91, 100, 332, 800, 1552, 1663
HspAI	GCGC	2 cut(s)	778, 1965
KasI	GGCGCC	1 cut(s)	1964
Ksp22I	TGATCA	1 cut(s)	1662
Kzo9I	GATC	7 cut(s)	157, 255, 367, 826, 1662, 1911, 1927
LmnI	GCTCC	3 cut(s)	28, 232, 1208
Lsp1109I	GCAGC	5 cut(s)	950, 1192, 1480, 1821, 1855
LweI	GCATC	4 cut(s)	724, 1083, 1706, 1741
MaeI	CTAG	3 cut(s)	926, 1397, 1538
MaeII	ACGT	4 cut(s)	56, 198, 865, 1801
MaeIII	GTNAC	7 cut(s)	293, 723, 974, 1009, 1144, 1511, 1944
MalI	GATC	7 cut(s)	159, 257, 369, 828, 1664, 1913, 1929
MbiI	CCGCTC	1 cut(s)	1970
MboI	GATC	7 cut(s)	157, 255, 367, 826, 1662, 1911, 1927
MfeI	CAATTG	1 cut(s)	20
MflI	RGATCY	2 cut(s)	367, 1927
MhlI	GDGCHC	2 cut(s)	871, 1213
Mly113I	GGCGCC	1 cut(s)	1965
MlyI	GAGTC	7 cut(s)	301, 311, 416, 971, 1185, 1444, 1691
MmeI	TCCRAC	3 cut(s)	132, 1065, 1465
MroXI	GAANNNNTTC	1 cut(s)	359
MseI	TTAA	5 cut(s)	81, 317, 348, 971, 983
MslI	CAYNNNNRTG	1 cut(s)	1712
MspA1I	CMGCKG	2 cut(s)	1471, 1868
MspI	CCGG	2 cut(s)	1206, 1527
MspR9I	CCNGG	3 cut(s)	134, 260, 1527
MunI	CAATTG	1 cut(s)	20
Mva1269I	GAATGC	1 cut(s)	689
MvaI	CCWGG	2 cut(s)	134, 260
MwoI	GCNNNNNNNGC	3 cut(s)	37, 935, 1772
NarI	GGCGCC	1 cut(s)	1965
NciI	CCSGG	1 cut(s)	1527
NdeII	GATC	7 cut(s)	157, 255, 367, 826, 1662, 1911, 1927
NlaIII	CATG	6 cut(s)	91, 100, 332, 800, 1552, 1663
NlaIV	GGNNCC	3 cut(s)	912, 1966, 2024
NmuCI	GTSAC	5 cut(s)	293, 723, 974, 1009, 1511
NspV	TTCGAA	1 cut(s)	238
PcsI	WCGNNNNNNNCGW	2 cut(s)	118, 166
PctI	GAATGC	1 cut(s)	689
PdmI	GAANNNNTTC	1 cut(s)	359
PfeI	GAWTC	4 cut(s)	171, 655, 785, 1794
PflMI	CCANNNNNTGG	1 cut(s)	1678
PfoI	TCCNGGA	1 cut(s)	258
PkrI	GCNGC	7 cut(s)	940, 1182, 1470, 1765, 1811, 1845, 1969
PleI	GAGTC	7 cut(s)	300, 310, 415, 971, 1185, 1444, 1690
PluTI	GGCGCC	1 cut(s)	1968
PpsI	GAGTC	7 cut(s)	300, 310, 415, 971, 1185, 1444, 1690
Psp124BI	GAGCTC	1 cut(s)	1213
Psp6I	CCWGG	2 cut(s)	132, 258
PspGI	CCWGG	2 cut(s)	132, 258
PspN4I	GGNNCC	3 cut(s)	912, 1966, 2024
PspPI	GGNCC	2 cut(s)	136, 1529
PsuI	RGATCY	2 cut(s)	367, 1927
PvuII	CAGCTG	2 cut(s)	1471, 1868
RsaI	GTAC	1 cut(s)	1498
RsaNI	GTAC	1 cut(s)	1497
RseI	CAYNNNNRTG	1 cut(s)	1712
SacI	GAGCTC	1 cut(s)	1213
SalI	GTCGAC	2 cut(s)	115, 1684
SaqAI	TTAA	5 cut(s)	81, 317, 348, 971, 983
SatI	GCNGC	7 cut(s)	939, 1181, 1469, 1764, 1810, 1844, 1968
Sau3AI	GATC	7 cut(s)	157, 255, 367, 826, 1662, 1911, 1927
Sau96I	GGNCC	2 cut(s)	136, 1529
SchI	GAGTC	7 cut(s)	301, 311, 416, 971, 1185, 1444, 1691
ScrFI	CCNGG	3 cut(s)	134, 260, 1527
SduI	GDGCHC	2 cut(s)	871, 1213
SfaNI	GCATC	4 cut(s)	724, 1083, 1706, 1741
SfcI	CTRYAG	1 cut(s)	1869
SfoI	GGCGCC	1 cut(s)	1966
SfuI	TTCGAA	1 cut(s)	238
SinI	GGWCC	2 cut(s)	136, 1529
SmiMI	CAYNNNNRTG	1 cut(s)	1712
SmlI	CTYRAG	4 cut(s)	245, 308, 371, 1028
SmoI	CTYRAG	4 cut(s)	245, 308, 371, 1028
SsiI	CCGC	3 cut(s)	358, 1763, 1968
SspDI	GGCGCC	1 cut(s)	1964
SspI	AATATT	1 cut(s)	1115
SspMI	CTAG	3 cut(s)	926, 1397, 1538
SstI	GAGCTC	1 cut(s)	1213
StyD4I	CCNGG	3 cut(s)	132, 258, 1525
StyI	CCWWGG	1 cut(s)	1284
TaaI	ACNGT	1 cut(s)	1780
TaiI	ACGT	4 cut(s)	59, 201, 868, 1804
TaqI	TCGA	6 cut(s)	116, 238, 563, 729, 1685, 1726
TaqII	GACCGA	1 cut(s)	102
TauI	GCSGC	2 cut(s)	1766, 1970
TfiI	GAWTC	4 cut(s)	171, 655, 785, 1794
Tru1I	TTAA	5 cut(s)	81, 317, 348, 971, 983
Tru9I	TTAA	5 cut(s)	81, 317, 348, 971, 983
TscAI	CASTG	3 cut(s)	1899, 1984, 2024
TseFI	GTSAC	5 cut(s)	293, 723, 974, 1009, 1511
TseI	GCWGC	5 cut(s)	938, 1180, 1468, 1809, 1843
Tsp45I	GTSAC	5 cut(s)	293, 723, 974, 1009, 1511
TspGWI	ACGGA	2 cut(s)	230, 1703
TspRI	CASTG	3 cut(s)	1899, 1984, 2024
Van91I	CCANNNNNTGG	1 cut(s)	1678
VneI	GTGCAC	1 cut(s)	867
VpaK11BI	GGWCC	2 cut(s)	136, 1529
XapI	RAATTY	6 cut(s)	124, 754, 994, 1279, 1290, 1768
XbaI	TCTAGA	1 cut(s)	1396
XmiI	GTMKAC	2 cut(s)	116, 1685
XmnI	GAANNNNTTC	1 cut(s)	359
XspI	CTAG	3 cut(s)	926, 1397, 1538

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.