pycom01g02900

Choline monooxygenase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
2355778 .. 2356029
252 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g02900.1

Sequence Viewer

Length: 252 bp
ATGGAAGTTGCACCAGTAGTTATGACTTGCATGGCTACGGGATACGAGCTACTGCTTGAGTCGGCATTGGAAGTCAACAACTCGAAGTACCTCTTCGGGCTTTTTCCCTTGGCAGTCTTCAGCAGAGTTGAGGTAGGGGTGGAAGGCACGGCAAAGAGAGCTTTTGCCTTGCTTCGGGTTGTGACGCCCAAAGTGCCACCACTTGCGGCAAGGATGTTCTTGTTATTCGCTTTGGTTGCAGGAACAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

84

Amino Acids

8.95

Weight (kDa)

7.9

Isoelectric Point (pI)

29.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 206
AcuI CTGAAG 1 cut(s) 103
AcyI GRCGYC 1 cut(s) 185
AfaI GTAC 1 cut(s) 89
AfiI CCNNNNNNNGG 1 cut(s) 174
AluBI AGCT 2 cut(s) 49, 161
AluI AGCT 2 cut(s) 49, 161
BbsI GAAGAC 1 cut(s) 109
BceAI ACGGC 1 cut(s) 165
BciVI GTATCC 1 cut(s) 35
BfuI GTATCC 1 cut(s) 35
BisI GCNGC 1 cut(s) 207
BlsI GCNGC 1 cut(s) 208
BpiI GAAGAC 1 cut(s) 109
BpuEI CTTGAG 1 cut(s) 77
BsaHI GRCGYC 1 cut(s) 185
BsaJI CCNNGG 1 cut(s) 108
Bsc4I CCNNNNNNNGG 1 cut(s) 174
Bse1I ACTGG 1 cut(s) 14
BseDI CCNNGG 1 cut(s) 108
BseGI GGATG 1 cut(s) 219
BseLI CCNNNNNNNGG 1 cut(s) 174
BseNI ACTGG 1 cut(s) 14
BslI CCNNNNNNNGG 1 cut(s) 174
BspACI CCGC 1 cut(s) 206
BsrI ACTGG 1 cut(s) 14
BssECI CCNNGG 1 cut(s) 108
BssNI GRCGYC 1 cut(s) 185
BssT1I CCWWGG 1 cut(s) 108
Bst6I CTCTTC 1 cut(s) 98
BstACI GRCGYC 1 cut(s) 185
BstF5I GGATG 1 cut(s) 219
BstMWI GCNNNNNNNGC 3 cut(s) 158, 193, 236
BstV2I GAAGAC 1 cut(s) 109
BsuI GTATCC 1 cut(s) 35
BtsCI GGATG 1 cut(s) 219
CseI GACGC 1 cut(s) 193
Csp6I GTAC 1 cut(s) 88
CviAII CATG 1 cut(s) 31
CviJI RGCY 4 cut(s) 35, 49, 100, 161
CviKI_1 RGCY 4 cut(s) 35, 49, 100, 161
CviQI GTAC 1 cut(s) 88
Eam1104I CTCTTC 1 cut(s) 98
EarI CTCTTC 1 cut(s) 98
Eco130I CCWWGG 1 cut(s) 108
Eco57I CTGAAG 1 cut(s) 103
EcoT14I CCWWGG 1 cut(s) 108
ErhI CCWWGG 1 cut(s) 108
FaeI CATG 1 cut(s) 34
FaiI YATR 2 cut(s) 23, 32
FalI AAGNNNNNCTT 2 cut(s) 77, 109
FatI CATG 1 cut(s) 30
Fnu4HI GCNGC 1 cut(s) 207
FokI GGATG 1 cut(s) 226
Fsp4HI GCNGC 1 cut(s) 207
GluI GCNGC 1 cut(s) 207
HgaI GACGC 1 cut(s) 193
Hin1I GRCGYC 1 cut(s) 185
Hin1II CATG 1 cut(s) 34
HincII GTYRAC 1 cut(s) 76
HindII GTYRAC 1 cut(s) 76
HinfI GANTC 1 cut(s) 59
Hpy166II GTNNAC 1 cut(s) 76
Hpy8I GTNNAC 1 cut(s) 76
HpyAV CCTTC 1 cut(s) 137
HpyCH4V TGCA 3 cut(s) 11, 30, 239
HpyF10VI GCNNNNNNNGC 3 cut(s) 158, 193, 236
Hsp92I GRCGYC 1 cut(s) 185
Hsp92II CATG 1 cut(s) 34
LpnPI CCDG 2 cut(s) 27, 225
MaeIII GTNAC 1 cut(s) 181
MboII GAAGA 2 cut(s) 85, 109
MlyI GAGTC 1 cut(s) 68
MnlI CCTC 2 cut(s) 101, 124
MwoI GCNNNNNNNGC 3 cut(s) 158, 193, 236
NlaIII CATG 1 cut(s) 34
NmuCI GTSAC 1 cut(s) 181
PkrI GCNGC 1 cut(s) 208
PleI GAGTC 1 cut(s) 67
PpsI GAGTC 1 cut(s) 67
RsaI GTAC 1 cut(s) 89
RsaNI GTAC 1 cut(s) 88
SatI GCNGC 1 cut(s) 207
SchI GAGTC 1 cut(s) 68
SetI ASST 4 cut(s) 51, 93, 135, 163
SmlI CTYRAG 1 cut(s) 56
SmoI CTYRAG 1 cut(s) 56
SsiI CCGC 1 cut(s) 206
StyI CCWWGG 1 cut(s) 108
TaqI TCGA 1 cut(s) 83
TauI GCSGC 1 cut(s) 209
TseFI GTSAC 1 cut(s) 181
Tsp45I GTSAC 1 cut(s) 181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.