gag-polypeptide of LTR copia-type
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD03G1176200.v1.1 MD08G1165300.v1.1 MD11G1237700.v1.1 |
| pyrus_communis | pycom01g02890 pycom01g02900 pycom02g19360 pycom04g06970 pycom04g07250 pycom04g10800 pycom05g07890 pycom09g14920 pycom11g04170 pycom12g09620 pycom13g19210 pycom13g24020 pycom13g25040 pycom13g26440 pycom13g27810 pycom15g37580 pycom420g00120 pycom520g00130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 211 |
| Acc16I | TGCGCA | 1 cut(s) | 1689 |
| Acc65I | GGTACC | 3 cut(s) | 1258, 2184, 4457 |
| AccB1I | GGYRCC | 4 cut(s) | 1258, 2184, 4457, 5007 |
| AccI | GTMKAC | 4 cut(s) | 1198, 2341, 3940, 4792 |
| AccII | CGCG | 3 cut(s) | 213, 2304, 2609 |
| AciI | CCGC | 5 cut(s) | 267, 860, 1176, 2082, 2609 |
| AclI | AACGTT | 2 cut(s) | 3169, 3771 |
| AclWI | GGATC | 6 cut(s) | 1057, 1944, 2902, 3539, 3872, 5302 |
| AcoI | YGGCCR | 7 cut(s) | 61, 316, 857, 1504, 3914, 4256, 4820 |
| AcuI | CTGAAG | 2 cut(s) | 4061, 4921 |
| AcvI | CACGTG | 1 cut(s) | 2059 |
| AcyI | GRCGYC | 3 cut(s) | 180, 208, 2525 |
| AdeI | CACNNNGTG | 1 cut(s) | 3353 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 1036, 1192, 2476, 2634, 3570, 4261 |
| AflII | CTTAAG | 2 cut(s) | 899, 3362 |
| AflIII | ACRYGT | 2 cut(s) | 883, 3681 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1025 |
| AhlI | ACTAGT | 2 cut(s) | 2530, 4610 |
| AjnI | CCWGG | 1 cut(s) | 2995 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3799, 3831 |
| AleI | CACNNNNGTG | 2 cut(s) | 1495, 2098 |
| Alw21I | GWGCWC | 4 cut(s) | 1602, 2089, 3234, 3381 |
| AlwI | GGATC | 6 cut(s) | 1057, 1944, 2902, 3539, 3872, 5302 |
| Ama87I | CYCGRG | 1 cut(s) | 2294 |
| ApeKI | GCWGC | 7 cut(s) | 222, 2309, 2613, 2616, 4891, 4955, 5221 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 2679, 2711, 4231, 4263, 5064, 5088, 5096, 5120 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2642, 3650 |
| Asp718I | GGTACC | 3 cut(s) | 1258, 2184, 4457 |
| AspA2I | CCTAGG | 1 cut(s) | 5288 |
| AspLEI | GCGC | 3 cut(s) | 1668, 1690, 2314 |
| AsuC2I | CCSGG | 1 cut(s) | 4853 |
| AvaI | CYCGRG | 1 cut(s) | 2294 |
| AvaII | GGWCC | 5 cut(s) | 994, 1027, 3047, 3502, 4178 |
| AvrII | CCTAGG | 1 cut(s) | 5288 |
| AxyI | CCTNAGG | 2 cut(s) | 2588, 3158 |
| BaeGI | GKGCMC | 1 cut(s) | 3583 |
| BalI | TGGCCA | 2 cut(s) | 1506, 3916 |
| BanI | GGYRCC | 4 cut(s) | 1258, 2184, 4457, 5007 |
| BanII | GRGCYC | 1 cut(s) | 1153 |
| BauI | CACGAG | 3 cut(s) | 1923, 2471, 2863 |
| BbrPI | CACGTG | 1 cut(s) | 2059 |
| Bbv12I | GWGCWC | 4 cut(s) | 1602, 2089, 3234, 3381 |
| BbvI | GCAGC | 7 cut(s) | 234, 2296, 2600, 2603, 4903, 4967, 5233 |
| BccI | CCATC | 7 cut(s) | 86, 586, 1082, 1515, 2497, 3563, 3572 |
| BceAI | ACGGC | 1 cut(s) | 76 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3588, 3622 |
| BciT130I | CCWGG | 1 cut(s) | 2997 |
| BciVI | GTATCC | 2 cut(s) | 17, 1583 |
| BcnI | CCSGG | 1 cut(s) | 4853 |
| BcuI | ACTAGT | 2 cut(s) | 2530, 4610 |
| BfmI | CTRYAG | 3 cut(s) | 1896, 2023, 4356 |
| BfrI | CTTAAG | 2 cut(s) | 899, 3362 |
| BfuI | GTATCC | 2 cut(s) | 17, 1583 |
| BglI | GCCNNNNNGGC | 3 cut(s) | 2297, 3162, 3485 |
| BglII | AGATCT | 1 cut(s) | 3541 |
| BisI | GCNGC | 8 cut(s) | 223, 860, 2310, 2614, 2617, 4892, 4956, 5222 |
| BlnI | CCTAGG | 1 cut(s) | 5288 |
| BlsI | GCNGC | 8 cut(s) | 224, 861, 2311, 2615, 2618, 4893, 4957, 5223 |
| Bme1390I | CCNGG | 2 cut(s) | 2997, 4853 |
| Bme18I | GGWCC | 5 cut(s) | 994, 1027, 3047, 3502, 4178 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1025 |
| BmeT110I | CYCGRG | 1 cut(s) | 2294 |
| BmrFI | CCNGG | 2 cut(s) | 2997, 4853 |
| BmsI | GCATC | 9 cut(s) | 234, 278, 1100, 1292, 1609, 1870, 3411, 3608, 4400 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3500 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3188, 3220 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2172, 4978 |
| BpuEI | CTTGAG | 3 cut(s) | 3218, 3566, 4485 |
| BpuMI | CCSGG | 1 cut(s) | 4853 |
| Bsa29I | ATCGAT | 2 cut(s) | 3567, 4063 |
| BsaAI | YACGTR | 6 cut(s) | 638, 1975, 2059, 2276, 2438, 2483 |
| BsaHI | GRCGYC | 3 cut(s) | 180, 208, 2525 |
| BsaI | GGTCTC | 1 cut(s) | 4153 |
| BsaWI | WCCGGW | 1 cut(s) | 2596 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 2780, 2810, 4327, 4357, 4966, 4996 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 1036, 1192, 2476, 2634, 3570, 4261 |
| Bse118I | RCCGGY | 2 cut(s) | 127, 4254 |
| Bse1I | ACTGG | 1 cut(s) | 1186 |
| Bse21I | CCTNAGG | 2 cut(s) | 2588, 3158 |
| Bse3DI | GCAATG | 1 cut(s) | 1260 |
| BseBI | CCWGG | 1 cut(s) | 2997 |
| BseCI | ATCGAT | 2 cut(s) | 3567, 4063 |
| BseGI | GGATG | 9 cut(s) | 578, 2772, 2985, 3039, 3319, 3616, 3771, 4138, 4495 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 1036, 1192, 2476, 2634, 3570, 4261 |
| BseMI | GCAATG | 1 cut(s) | 1260 |
| BseMII | CTCAG | 5 cut(s) | 1238, 1332, 2163, 2602, 5289 |
| BseNI | ACTGG | 1 cut(s) | 1186 |
| BseRI | GAGGAG | 5 cut(s) | 1893, 3237, 3296, 3371, 4974 |
| BseSI | GKGCMC | 1 cut(s) | 3583 |
| BseX3I | CGGCCG | 1 cut(s) | 61 |
| BseXI | GCAGC | 7 cut(s) | 234, 2296, 2600, 2603, 4903, 4967, 5233 |
| BsgI | GTGCAG | 2 cut(s) | 1903, 2122 |
| Bsh1236I | CGCG | 3 cut(s) | 213, 2304, 2609 |
| Bsh1285I | CGRYCG | 2 cut(s) | 64, 4067 |
| BshNI | GGYRCC | 4 cut(s) | 1258, 2184, 4457, 5007 |
| BshVI | ATCGAT | 2 cut(s) | 3567, 4063 |
| BsiEI | CGRYCG | 2 cut(s) | 64, 4067 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1602, 2089, 3234, 3381 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2294 |
| BsiSI | CCGG | 5 cut(s) | 128, 2597, 4255, 4823, 4852 |
| BslFI | GGGAC | 3 cut(s) | 354, 3508, 4869 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 1036, 1192, 2476, 2634, 3570, 4261 |
| BsmBI | CGTCTC | 2 cut(s) | 199, 2584 |
| BsmFI | GGGAC | 3 cut(s) | 354, 3508, 4869 |
| BsmI | GAATGC | 3 cut(s) | 1178, 3481, 3856 |
| Bso31I | GGTCTC | 1 cut(s) | 4153 |
| BsoBI | CYCGRG | 1 cut(s) | 2294 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1153, 1602, 2089, 3234, 3381, 3583 |
| Bsp1407I | TGTACA | 1 cut(s) | 2034 |
| Bsp19I | CCATGG | 2 cut(s) | 3399, 3878 |
| BspACI | CCGC | 5 cut(s) | 267, 860, 1176, 2082, 2609 |
| BspCNI | CTCAG | 5 cut(s) | 1239, 1333, 2164, 2601, 5290 |
| BspDI | ATCGAT | 2 cut(s) | 3567, 4063 |
| BspFNI | CGCG | 3 cut(s) | 213, 2304, 2609 |
| BspPI | GGATC | 6 cut(s) | 1057, 1944, 2902, 3539, 3872, 5302 |
| BspQI | GCTCTTC | 2 cut(s) | 4965, 4976 |
| BspT107I | GGYRCC | 4 cut(s) | 1258, 2184, 4457, 5007 |
| BspTI | CTTAAG | 2 cut(s) | 899, 3362 |
| BspTNI | GGTCTC | 1 cut(s) | 4153 |
| BsrDI | GCAATG | 1 cut(s) | 1260 |
| BsrFI | RCCGGY | 2 cut(s) | 127, 4254 |
| BsrGI | TGTACA | 1 cut(s) | 2034 |
| BsrI | ACTGG | 1 cut(s) | 1186 |
| BssAI | RCCGGY | 2 cut(s) | 127, 4254 |
| BssNAI | GTATAC | 2 cut(s) | 1199, 2342 |
| BssNI | GRCGYC | 3 cut(s) | 180, 208, 2525 |
| BssSI | CACGAG | 3 cut(s) | 1923, 2471, 2863 |
| BssT1I | CCWWGG | 7 cut(s) | 243, 1023, 2446, 3399, 3878, 4259, 5288 |
| Bst1107I | GTATAC | 2 cut(s) | 1199, 2342 |
| Bst2BI | CACGAG | 3 cut(s) | 1923, 2471, 2863 |
| Bst2UI | CCWGG | 1 cut(s) | 2997 |
| Bst4CI | ACNGT | 4 cut(s) | 166, 308, 1854, 4001 |
| Bst6I | CTCTTC | 5 cut(s) | 1130, 4428, 4965, 4976, 5000 |
| BstACI | GRCGYC | 3 cut(s) | 180, 208, 2525 |
| BstAFI | CTTAAG | 2 cut(s) | 899, 3362 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3421 |
| BstAUI | TGTACA | 1 cut(s) | 2034 |
| BstBAI | YACGTR | 6 cut(s) | 638, 1975, 2059, 2276, 2438, 2483 |
| BstC8I | GCNNGC | 9 cut(s) | 262, 975, 1504, 2302, 2478, 2611, 4366, 4713, 5238 |
| BstDSI | CCRYGG | 2 cut(s) | 3399, 3878 |
| BstEII | GGTNACC | 1 cut(s) | 2592 |
| BstF5I | GGATG | 9 cut(s) | 578, 2772, 2985, 3039, 3319, 3616, 3771, 4138, 4495 |
| BstFNI | CGCG | 3 cut(s) | 213, 2304, 2609 |
| BstHHI | GCGC | 3 cut(s) | 1668, 1690, 2314 |
| BstMCI | CGRYCG | 2 cut(s) | 64, 4067 |
| BstNI | CCWGG | 1 cut(s) | 2997 |
| BstNSI | RCATGY | 6 cut(s) | 140, 977, 1459, 2380, 3029, 3685 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3500 |
| BstPI | GGTNACC | 1 cut(s) | 2592 |
| BstSCI | CCNGG | 2 cut(s) | 2995, 4851 |
| BstSFI | CTRYAG | 3 cut(s) | 1896, 2023, 4356 |
| BstSLI | GKGCMC | 1 cut(s) | 3583 |
| BstSNI | TACGTA | 2 cut(s) | 638, 2276 |
| BstUI | CGCG | 3 cut(s) | 213, 2304, 2609 |
| BstV1I | GCAGC | 7 cut(s) | 234, 2296, 2600, 2603, 4903, 4967, 5233 |
| BstX2I | RGATCY | 3 cut(s) | 3541, 3864, 5294 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 1146, 3057, 3512, 4468 |
| BstYI | RGATCY | 3 cut(s) | 3541, 3864, 5294 |
| BstZ17I | GTATAC | 2 cut(s) | 1199, 2342 |
| BstZI | CGGCCG | 1 cut(s) | 61 |
| Bsu15I | ATCGAT | 2 cut(s) | 3567, 4063 |
| Bsu36I | CCTNAGG | 2 cut(s) | 2588, 3158 |
| BsuI | GTATCC | 2 cut(s) | 17, 1583 |
| BsuTUI | ATCGAT | 2 cut(s) | 3567, 4063 |
| BtgI | CCRYGG | 2 cut(s) | 3399, 3878 |
| BtsCI | GGATG | 9 cut(s) | 578, 2772, 2985, 3039, 3319, 3616, 3771, 4138, 4495 |
| BtsI | GCAGTG | 1 cut(s) | 4087 |
| BtsIMutI | CAGTG | 3 cut(s) | 313, 2267, 4087 |
| Cac8I | GCNNGC | 9 cut(s) | 262, 975, 1504, 2302, 2478, 2611, 4366, 4713, 5238 |
| CfoI | GCGC | 3 cut(s) | 1668, 1690, 2314 |
| Cfr10I | RCCGGY | 2 cut(s) | 127, 4254 |
| ClaI | ATCGAT | 2 cut(s) | 3567, 4063 |
| CseI | GACGC | 5 cut(s) | 188, 291, 2165, 2533, 2615 |
| DraI | TTTAAA | 4 cut(s) | 526, 808, 1408, 2787 |
| DraIII | CACNNNGTG | 1 cut(s) | 3353 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1025 |
| EaeI | YGGCCR | 7 cut(s) | 61, 316, 857, 1504, 3914, 4256, 4820 |
| EagI | CGGCCG | 1 cut(s) | 61 |
| Eam1104I | CTCTTC | 5 cut(s) | 1130, 4428, 4965, 4976, 5000 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1025 |
| EarI | CTCTTC | 5 cut(s) | 1130, 4428, 4965, 4976, 5000 |
| EciI | GGCGGA | 1 cut(s) | 2097 |
| EclXI | CGGCCG | 1 cut(s) | 61 |
| Eco105I | TACGTA | 2 cut(s) | 638, 2276 |
| Eco130I | CCWWGG | 7 cut(s) | 243, 1023, 2446, 3399, 3878, 4259, 5288 |
| Eco147I | AGGCCT | 2 cut(s) | 833, 1134 |
| Eco24I | GRGCYC | 1 cut(s) | 1153 |
| Eco31I | GGTCTC | 1 cut(s) | 4153 |
| Eco47I | GGWCC | 5 cut(s) | 994, 1027, 3047, 3502, 4178 |
| Eco52I | CGGCCG | 1 cut(s) | 61 |
| Eco57I | CTGAAG | 2 cut(s) | 4061, 4921 |
| Eco72I | CACGTG | 1 cut(s) | 2059 |
| Eco81I | CCTNAGG | 2 cut(s) | 2588, 3158 |
| Eco88I | CYCGRG | 1 cut(s) | 2294 |
| Eco91I | GGTNACC | 1 cut(s) | 2592 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3154 |
| EcoO65I | GGTNACC | 1 cut(s) | 2592 |
| EcoRI | GAATTC | 1 cut(s) | 2630 |
| EcoRII | CCWGG | 1 cut(s) | 2995 |
| EcoT14I | CCWWGG | 7 cut(s) | 243, 1023, 2446, 3399, 3878, 4259, 5288 |
| EcoT22I | ATGCAT | 2 cut(s) | 3426, 5060 |
| EcoT38I | GRGCYC | 1 cut(s) | 1153 |
| ErhI | CCWWGG | 7 cut(s) | 243, 1023, 2446, 3399, 3878, 4259, 5288 |
| Esp3I | CGTCTC | 2 cut(s) | 199, 2584 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 4321, 4353 |
| FaqI | GGGAC | 3 cut(s) | 354, 3508, 4869 |
| FauI | CCCGC | 2 cut(s) | 274, 2602 |
| FauNDI | CATATG | 5 cut(s) | 1307, 3226, 3846, 4647, 4740 |
| FblI | GTMKAC | 4 cut(s) | 1198, 2341, 3940, 4792 |
| Fnu4HI | GCNGC | 8 cut(s) | 223, 860, 2310, 2614, 2617, 4892, 4956, 5222 |
| FokI | GGATG | 9 cut(s) | 565, 2759, 2992, 3046, 3326, 3623, 3778, 4145, 4482 |
| FriOI | GRGCYC | 1 cut(s) | 1153 |
| Fsp4HI | GCNGC | 8 cut(s) | 223, 860, 2310, 2614, 2617, 4892, 4956, 5222 |
| FspI | TGCGCA | 1 cut(s) | 1689 |
| GlaI | GCGC | 3 cut(s) | 1667, 1689, 2313 |
| GluI | GCNGC | 8 cut(s) | 223, 860, 2310, 2614, 2617, 4892, 4956, 5222 |
| HapII | CCGG | 5 cut(s) | 128, 2597, 4255, 4823, 4852 |
| HgaI | GACGC | 5 cut(s) | 188, 291, 2165, 2533, 2615 |
| HhaI | GCGC | 3 cut(s) | 1668, 1690, 2314 |
| Hin1I | GRCGYC | 3 cut(s) | 180, 208, 2525 |
| Hin6I | GCGC | 3 cut(s) | 1666, 1688, 2312 |
| HinP1I | GCGC | 3 cut(s) | 1666, 1688, 2312 |
| HincII | GTYRAC | 3 cut(s) | 304, 2512, 2556 |
| HindII | GTYRAC | 3 cut(s) | 304, 2512, 2556 |
| HindIII | AAGCTT | 2 cut(s) | 3368, 5276 |
| HpaI | GTTAAC | 1 cut(s) | 2512 |
| HpaII | CCGG | 5 cut(s) | 128, 2597, 4255, 4823, 4852 |
| Hpy99I | CGWCG | 5 cut(s) | 182, 213, 2579, 2609, 2627 |
| HpyCH4III | ACNGT | 4 cut(s) | 166, 308, 1854, 4001 |
| Hsp92I | GRCGYC | 3 cut(s) | 180, 208, 2525 |
| HspAI | GCGC | 3 cut(s) | 1666, 1688, 2312 |
| KpnI | GGTACC | 3 cut(s) | 1262, 2188, 4461 |
| KspAI | GTTAAC | 1 cut(s) | 2512 |
| LguI | GCTCTTC | 2 cut(s) | 4965, 4976 |
| LmnI | GCTCC | 8 cut(s) | 124, 1906, 2084, 3358, 4505, 4888, 4987, 5290 |
| Lsp1109I | GCAGC | 7 cut(s) | 234, 2296, 2600, 2603, 4903, 4967, 5233 |
| LweI | GCATC | 9 cut(s) | 234, 278, 1100, 1292, 1609, 1870, 3411, 3608, 4400 |
| MaeIII | GTNAC | 9 cut(s) | 166, 1163, 1312, 1528, 2592, 3440, 4016, 4207, 4906 |
| MfeI | CAATTG | 2 cut(s) | 3071, 4692 |
| MflI | RGATCY | 3 cut(s) | 3541, 3864, 5294 |
| MhlI | GDGCHC | 6 cut(s) | 1153, 1602, 2089, 3234, 3381, 3583 |
| MlsI | TGGCCA | 2 cut(s) | 1506, 3916 |
| MluNI | TGGCCA | 2 cut(s) | 1506, 3916 |
| MlyI | GAGTC | 9 cut(s) | 1160, 1372, 2019, 2817, 3916, 4597, 4851, 4877, 5088 |
| Mox20I | TGGCCA | 2 cut(s) | 1506, 3916 |
| Mph1103I | ATGCAT | 2 cut(s) | 3426, 5060 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2642, 3650 |
| MscI | TGGCCA | 2 cut(s) | 1506, 3916 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1144, 1495, 1940, 2098, 3849, 5177 |
| Msp20I | TGGCCA | 2 cut(s) | 1506, 3916 |
| MspCI | CTTAAG | 2 cut(s) | 899, 3362 |
| MspI | CCGG | 5 cut(s) | 128, 2597, 4255, 4823, 4852 |
| MspR9I | CCNGG | 2 cut(s) | 2997, 4853 |
| MunI | CAATTG | 2 cut(s) | 3071, 4692 |
| Mva1269I | GAATGC | 3 cut(s) | 1178, 3481, 3856 |
| MvaI | CCWGG | 1 cut(s) | 2997 |
| MvnI | CGCG | 3 cut(s) | 213, 2304, 2609 |
| NciI | CCSGG | 1 cut(s) | 4853 |
| NcoI | CCATGG | 2 cut(s) | 3399, 3878 |
| NdeI | CATATG | 5 cut(s) | 1307, 3226, 3846, 4647, 4740 |
| NmeAIII | GCCGAG | 1 cut(s) | 228 |
| NmuCI | GTSAC | 4 cut(s) | 166, 1163, 2592, 4207 |
| NsbI | TGCGCA | 1 cut(s) | 1689 |
| NsiI | ATGCAT | 2 cut(s) | 3426, 5060 |
| NspI | RCATGY | 6 cut(s) | 140, 977, 1459, 2380, 3029, 3685 |
| OliI | CACNNNNGTG | 2 cut(s) | 1495, 2098 |
| PaeI | GCATGC | 1 cut(s) | 977 |
| PceI | AGGCCT | 2 cut(s) | 833, 1134 |
| PciI | ACATGT | 1 cut(s) | 3681 |
| PciSI | GCTCTTC | 2 cut(s) | 4965, 4976 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2292 |
| PctI | GAATGC | 3 cut(s) | 1178, 3481, 3856 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2642, 3650 |
| PkrI | GCNGC | 8 cut(s) | 224, 861, 2311, 2615, 2618, 4893, 4957, 5223 |
| Ple19I | CGATCG | 1 cut(s) | 4067 |
| PleI | GAGTC | 9 cut(s) | 1160, 1371, 2018, 2817, 3915, 4596, 4851, 4876, 5087 |
| PmaCI | CACGTG | 1 cut(s) | 2059 |
| PmlI | CACGTG | 1 cut(s) | 2059 |
| PpsI | GAGTC | 9 cut(s) | 1160, 1371, 2018, 2817, 3915, 4596, 4851, 4876, 5087 |
| Ppu21I | YACGTR | 6 cut(s) | 638, 1975, 2059, 2276, 2438, 2483 |
| PscI | ACATGT | 1 cut(s) | 3681 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3500 |
| Psp1406I | AACGTT | 2 cut(s) | 3169, 3771 |
| Psp6I | CCWGG | 1 cut(s) | 2995 |
| PspCI | CACGTG | 1 cut(s) | 2059 |
| PspEI | GGTNACC | 1 cut(s) | 2592 |
| PspGI | CCWGG | 1 cut(s) | 2995 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 58, 90 |
| PsuI | RGATCY | 3 cut(s) | 3541, 3864, 5294 |
| PvuI | CGATCG | 1 cut(s) | 4067 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1144, 1495, 1940, 2098, 3849, 5177 |
| SapI | GCTCTTC | 2 cut(s) | 4965, 4976 |
| SatI | GCNGC | 8 cut(s) | 223, 860, 2310, 2614, 2617, 4892, 4956, 5222 |
| SchI | GAGTC | 9 cut(s) | 1160, 1372, 2019, 2817, 3916, 4597, 4851, 4877, 5088 |
| ScrFI | CCNGG | 2 cut(s) | 2997, 4853 |
| SduI | GDGCHC | 6 cut(s) | 1153, 1602, 2089, 3234, 3381, 3583 |
| SfaNI | GCATC | 9 cut(s) | 234, 278, 1100, 1292, 1609, 1870, 3411, 3608, 4400 |
| SfcI | CTRYAG | 3 cut(s) | 1896, 2023, 4356 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 3162 |
| SinI | GGWCC | 5 cut(s) | 994, 1027, 3047, 3502, 4178 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1144, 1495, 1940, 2098, 3849, 5177 |
| SmlI | CTYRAG | 5 cut(s) | 899, 3233, 3362, 3545, 4500 |
| SmoI | CTYRAG | 5 cut(s) | 899, 3233, 3362, 3545, 4500 |
| SnaBI | TACGTA | 2 cut(s) | 638, 2276 |
| SpeI | ACTAGT | 2 cut(s) | 2530, 4610 |
| SphI | GCATGC | 1 cut(s) | 977 |
| SseBI | AGGCCT | 2 cut(s) | 833, 1134 |
| SsiI | CCGC | 5 cut(s) | 267, 860, 1176, 2082, 2609 |
| SspI | AATATT | 4 cut(s) | 2229, 2504, 2548, 2570 |
| StuI | AGGCCT | 2 cut(s) | 833, 1134 |
| StyD4I | CCNGG | 2 cut(s) | 2995, 4851 |
| StyI | CCWWGG | 7 cut(s) | 243, 1023, 2446, 3399, 3878, 4259, 5288 |
| TaaI | ACNGT | 4 cut(s) | 166, 308, 1854, 4001 |
| TaqII | GACCGA | 2 cut(s) | 185, 3490 |
| TatI | WGTACW | 3 cut(s) | 1854, 2034, 4118 |
| TauI | GCSGC | 1 cut(s) | 862 |
| TscAI | CASTG | 3 cut(s) | 313, 2274, 4094 |
| TseFI | GTSAC | 4 cut(s) | 166, 1163, 2592, 4207 |
| TseI | GCWGC | 7 cut(s) | 222, 2309, 2613, 2616, 4891, 4955, 5221 |
| Tsp45I | GTSAC | 4 cut(s) | 166, 1163, 2592, 4207 |
| TspGWI | ACGGA | 7 cut(s) | 102, 2497, 2527, 2541, 2563, 2579, 4901 |
| TspRI | CASTG | 3 cut(s) | 313, 2274, 4094 |
| Vha464I | CTTAAG | 2 cut(s) | 899, 3362 |
| VpaK11BI | GGWCC | 5 cut(s) | 994, 1027, 3047, 3502, 4178 |
| XceI | RCATGY | 6 cut(s) | 140, 977, 1459, 2380, 3029, 3685 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2894 |
| XmaJI | CCTAGG | 1 cut(s) | 5288 |
| XmiI | GTMKAC | 4 cut(s) | 1198, 2341, 3940, 4792 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2642, 3650 |
| ZraI | GACGTC | 1 cut(s) | 209 |
| Zsp2I | ATGCAT | 2 cut(s) | 3426, 5060 |