Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0003985

Physical Location & Seq

Genomic Coordinates Reverse (-)

6017372 .. 6019989

Gene Structure 2618 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGGACGACCTCGGCCGGCGACCACCCCTCCCCAAATCCCACCACCACCGCCGCCCTAACCAAACCGCCTCCGCCGCGGACCCAAATTCCTACCCCAAGGCTTCCGACGCGCTTCCTCTGCCTCTTTACCTCACCAATGGCCTCTTCGTCACTCTCTTTTTCACCGTCGCCTACTTCCTCCTGAACCGGTGGCGCGAGAAGATCCGCACTTCCACGCCGCTTCACGTAGTCACGCTCTCGGAGATCGCCGCCATCTTCTCCCTCTTCGCCTCCGTCATCTACCTTCTCGGCTTCTTCGGTATAGACTTCGTCCAGTCCTTCGTCGCTCCCCGAACCCCGCACGACGACTGGCACGAGCACGACGTCGTTCTCGAATCGCCGCCGCCGCGTCCTCCTCAGCAGAAGAAAGATGAGCAGCTAATCTCTAAAGAAGACGAGGAGATCGTCGAGTCGGTGTTGTCCGGAACGACGGCGTCCTACGAGCTCGAATCGAAGCTCGGGGACTGTAAACGAGCCGCGGCGATCCGGCGCGAGGCTTTGCAGAAAACGACGGGTCGTTCGCTGCAGGGGCTGCCGCTGGAGGGCTTCGATTATCAGGCGATACTAGGACAGTGCTGTGAGAATCCGGTGGGGTATGTGCAGATCCCGGTGGGAGTCGCCGGACCGCTGTTGCTCGACGGAGAAGAGTACATGGTGCCAATGGCGACAACGGAGGGGTGCTTGGTGGCCAGCACCAATAGGGGATTCAAGGCAATCTACGCCTCAGGCGGCGCCGAGAGTGTCCTCTTCAACGACTCCATGACCAGAGCTCCAATTGTGAGGTTCCACTCCGTCGTTAGGGCTGCTCAGCTCAAGTTCTTCGTCGAGAACCCTCTCAATTTTGATGCTCTCGCCGTCGTTTTCAACAGGTCTAGCAGATTTGCAAAGCTCGAAAAGATTCGAAGCGCGATAGCAGGCAGGAATCTGTACCTAAGGTTTTCATGCAGCACTGGAGATGCCATGGGCATGAACATGATATCCAAAGGCGTTCAATATGTTCTCGAATTCCTTCAAAATGAATTCCCGGACATGGAAGTTGTCGGCATCTCTGGAAACTTCTGCTCAGACAAGAAAGCAGCAGCCGTAAATTGGATTGAAGGGCGAGGGAAATCAGTAACTTGCGAGGCAGTCATCAAGGAGGAAGTGGTGAGGAAGGTACTGAAAACCGATGTGGATTCCCTTGTGAAGCTTAACGTGAATAAAAACCTTGTTGGGTCTGCCATGGCTGGTGCTCTTGGTGGGTTTAATGCCCACGCCAGCAATATTGTTTCTGCAGTCTTCATAGCCACCGGCCAGGACCCTGCTCAGAATATTGAGAGCTCTCACTGCATTACCTTGATGGAAGCCGACGGCAATGACCTTCACATCTCAGTCACCATGCCTTCCATTGAGGTGGGTACAGTTGGAGGAGGAACACAACTCGCATCCCAATCAGCCTGCTTGAACTTGCTTGGTGTCAAGGGGGCAAGCAAAGACTCTCCTGGTTTAAACTCAAGGCAACTGGCGAGAATTGTAGCCGGAGCTGTCCTAGCAGGGGAGCTTTCTCTCATGTCAGCCATTGCATCTGGGCAGCTAGTGCAGAGCCACATGAAATACAACCGATCTAGCAGGGACATTGCAAACCTCGCCTCGGTAAACACGGGTAGAATACAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009526 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031966 GO:0031967 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044435 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

565

Amino Acids

61.01

Weight (kDa)

6.65

Isoelectric Point (pI)

41.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	173 - 547	5.8e-147	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76490
fragaria_vesca	FvH4_1g09980 FvH4_5g26180
malus_domestica	MD02G1108500.v1.1 MD02G1108700.v1.1 MD04G1238500.v1.1 MD08G1025200.v1.1 MD15G1227900.v1.1
prunus_persica	Prupe.7G187000_v2.0.a1 Prupe.7G187500_v2.0.a1
pyrus_communis	pycom02g08710 pycom02g08720 pycom15g20270
rosa_chinensis	RchiOBHm_Chr2g0096771 RchiOBHm_Chr7g0216871
rosa_laevigata	RLG00000002531 RLG00000016668
rosa_multiflora	Rmu_sc0000854.1_g000004 Rmu_sc0004291.1_g000010 Rmu_sc0030893.1_g000001
rosa_roxburghii	Rroxscaffold_2G00145340 Rroxscaffold_3G00242800
rosa_rugosa	Rorug02G0060600 Rorug07G0164000.1
rosa_samantha	Rh2AG107800 Rh2BG110200 Rh2CG112100 Rh2DG111500 Rh7AG303400 Rh7BG295400 Rh7CG322100
rosa_wichuraiana	Rw2G008350 Rw7G025820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	366
AccB1I	GGYRCC	2 cut(s)	694, 770
AccII	CGCG	7 cut(s)	77, 110, 195, 388, 518, 531, 947
AccIII	TCCGGA	1 cut(s)	461
AclWI	GGATC	3 cut(s)	196, 517, 637
AcoI	YGGCCR	3 cut(s)	13, 726, 1330
AcsI	RAATTY	3 cut(s)	85, 1043, 1058
AcyI	GRCGYC	3 cut(s)	363, 473, 771
AfaI	GTAC	4 cut(s)	689, 968, 1197, 1438
AfiI	CCNNNNNNNGG	7 cut(s)	532, 581, 837, 1069, 1128, 1573, 1669
AgeI	ACCGGT	1 cut(s)	186
AgsI	TTSAA	7 cut(s)	748, 790, 904, 1031, 1052, 1136, 1483
AjnI	CCWGG	2 cut(s)	1332, 1519
AjuI	GAANNNNNNNTTGG	4 cut(s)	128, 160, 728, 760
AloI	GAACNNNNNNTCC	2 cut(s)	1001, 1033
Alw21I	GWGCWC	5 cut(s)	360, 486, 811, 1273, 1361
AlwI	GGATC	3 cut(s)	196, 517, 637
AlwNI	CAGNNNCTG	1 cut(s)	571
Ama87I	CYCGRG	1 cut(s)	497
Aor13HI	TCCGGA	1 cut(s)	461
AoxI	GGCC	4 cut(s)	13, 139, 726, 1330
ApeKI	GCWGC	8 cut(s)	415, 562, 571, 842, 984, 1115, 1118, 1609
ApoI	RAATTY	3 cut(s)	85, 1043, 1058
ArsI	GACNNNNNNTTYG	2 cut(s)	541, 573
AsiGI	ACCGGT	1 cut(s)	186
Asp700I	GAANNNNTTC	2 cut(s)	936, 1047
AspLEI	GCGC	5 cut(s)	112, 195, 531, 773, 947
AspS9I	GGNCC	3 cut(s)	79, 662, 1336
AsuC2I	CCSGG	2 cut(s)	647, 1064
AsuHPI	GGTGA	4 cut(s)	124, 154, 1198, 1405
AsuII	TTCGAA	1 cut(s)	940
AvaI	CYCGRG	1 cut(s)	497
AvaII	GGWCC	3 cut(s)	79, 662, 1336
AxyI	CCTNAGG	2 cut(s)	763, 971
BalI	TGGCCA	1 cut(s)	728
BanI	GGYRCC	2 cut(s)	694, 770
BanII	GRGCYC	3 cut(s)	486, 811, 1361
BauI	CACGAG	1 cut(s)	353
BbsI	GAAGAC	2 cut(s)	438, 1309
Bbv12I	GWGCWC	5 cut(s)	360, 486, 811, 1273, 1361
BbvCI	CCTCAGC	1 cut(s)	396
BbvI	GCAGC	8 cut(s)	427, 549, 558, 829, 996, 1127, 1130, 1621
BccI	CCATC	2 cut(s)	260, 1372
BceAI	ACGGC	4 cut(s)	486, 878, 1106, 1405
BciT130I	CCWGG	2 cut(s)	1334, 1521
BcnI	CCSGG	2 cut(s)	647, 1064
BfaI	CTAG	5 cut(s)	605, 912, 1568, 1613, 1644
BfmI	CTRYAG	2 cut(s)	563, 1311
BfoI	RGCGCY	1 cut(s)	774
BlpI	GCTNAGC	1 cut(s)	846
Bme1390I	CCNGG	4 cut(s)	647, 1064, 1334, 1521
Bme18I	GGWCC	3 cut(s)	79, 662, 1336
BmeT110I	CYCGRG	1 cut(s)	497
BmgT120I	GGNCC	3 cut(s)	79, 662, 1336
BmiI	GGNNCC	5 cut(s)	81, 696, 772, 824, 1338
BmrFI	CCNGG	4 cut(s)	647, 1064, 1334, 1521
BmsI	GCATC	5 cut(s)	874, 985, 1092, 1472, 1610
BpiI	GAAGAC	2 cut(s)	438, 1309
BpmI	CTGGAG	2 cut(s)	599, 1011
Bpu10I	CCTNAGC	1 cut(s)	396
Bpu1102I	GCTNAGC	1 cut(s)	846
Bpu14I	TTCGAA	1 cut(s)	940
BpuEI	CTTGAG	2 cut(s)	836, 1516
BpuMI	CCSGG	2 cut(s)	647, 1064
BsaAI	YACGTR	1 cut(s)	226
BsaHI	GRCGYC	3 cut(s)	363, 473, 771
BsaJI	CCNNGG	7 cut(s)	10, 75, 96, 516, 999, 1260, 1668
BsaWI	WCCGGW	3 cut(s)	186, 461, 625
BsaXI	ACNNNNNCTCC	4 cut(s)	12, 42, 793, 823
Bsc4I	CCNNNNNNNGG	7 cut(s)	532, 581, 837, 1069, 1128, 1573, 1669
Bse118I	RCCGGY	3 cut(s)	15, 186, 1328
Bse1I	ACTGG	4 cut(s)	313, 353, 994, 1545
Bse21I	CCTNAGG	2 cut(s)	763, 971
Bse3DI	GCAATG	3 cut(s)	1399, 1596, 1653
BseAI	TCCGGA	1 cut(s)	461
BseBI	CCWGG	2 cut(s)	1334, 1521
BseDI	CCNNGG	7 cut(s)	10, 75, 96, 516, 999, 1260, 1668
BseGI	GGATG	1 cut(s)	1463
BseLI	CCNNNNNNNGG	7 cut(s)	532, 581, 837, 1069, 1128, 1573, 1669
BseMI	GCAATG	3 cut(s)	1399, 1596, 1653
BseMII	CTCAG	6 cut(s)	410, 777, 860, 1116, 1358, 1422
BseNI	ACTGG	4 cut(s)	313, 353, 994, 1545
BseRI	GAGGAG	3 cut(s)	384, 452, 1461
BseX3I	CGGCCG	1 cut(s)	13
BseXI	GCAGC	8 cut(s)	427, 549, 558, 829, 996, 1127, 1130, 1621
BsgI	GTGCAG	2 cut(s)	659, 1637
Bsh1236I	CGCG	7 cut(s)	77, 110, 195, 388, 518, 531, 947
Bsh1285I	CGRYCG	1 cut(s)	16
BshFI	GGCC	4 cut(s)	15, 141, 728, 1332
BshNI	GGYRCC	2 cut(s)	694, 770
BshTI	ACCGGT	1 cut(s)	186
BsiEI	CGRYCG	1 cut(s)	16
BsiHKAI	GWGCWC	5 cut(s)	360, 486, 811, 1273, 1361
BsiHKCI	CYCGRG	1 cut(s)	497
BslFI	GGGAC	2 cut(s)	515, 1664
BslI	CCNNNNNNNGG	7 cut(s)	532, 581, 837, 1069, 1128, 1573, 1669
BsmFI	GGGAC	2 cut(s)	515, 1664
BsnI	GGCC	4 cut(s)	15, 141, 728, 1332
BsoBI	CYCGRG	1 cut(s)	497
Bsp119I	TTCGAA	1 cut(s)	940
Bsp1286I	GDGCHC	5 cut(s)	360, 486, 811, 1273, 1361
Bsp13I	TCCGGA	1 cut(s)	461
Bsp143I	GATC	6 cut(s)	201, 243, 441, 522, 642, 1640
Bsp1720I	GCTNAGC	1 cut(s)	846
Bsp19I	CCATGG	2 cut(s)	999, 1260
BspANI	GGCC	4 cut(s)	15, 141, 728, 1332
BspCNI	CTCAG	6 cut(s)	409, 776, 859, 1115, 1357, 1421
BspEI	TCCGGA	1 cut(s)	461
BspFNI	CGCG	7 cut(s)	77, 110, 195, 388, 518, 531, 947
BspLI	GGNNCC	5 cut(s)	81, 696, 772, 824, 1338
BspMAI	CTGCAG	2 cut(s)	567, 1315
BspPI	GGATC	3 cut(s)	196, 517, 637
BspT104I	TTCGAA	1 cut(s)	940
BspT107I	GGYRCC	2 cut(s)	694, 770
BsrDI	GCAATG	3 cut(s)	1399, 1596, 1653
BsrFI	RCCGGY	3 cut(s)	15, 186, 1328
BsrI	ACTGG	4 cut(s)	313, 353, 994, 1545
BssAI	RCCGGY	3 cut(s)	15, 186, 1328
BssECI	CCNNGG	7 cut(s)	10, 75, 96, 516, 999, 1260, 1668
BssMI	GATC	6 cut(s)	201, 243, 441, 522, 642, 1640
BssNI	GRCGYC	3 cut(s)	363, 473, 771
BssSI	CACGAG	1 cut(s)	353
BssT1I	CCWWGG	3 cut(s)	96, 999, 1260
Bst2BI	CACGAG	1 cut(s)	353
Bst2UI	CCWGG	2 cut(s)	1334, 1521
Bst4CI	ACNGT	5 cut(s)	166, 506, 612, 1441, 1692
Bst6I	CTCTTC	4 cut(s)	149, 269, 678, 791
BstACI	GRCGYC	3 cut(s)	363, 473, 771
BstAPI	GCANNNNNTGC	2 cut(s)	571, 1615
BstBAI	YACGTR	1 cut(s)	226
BstBI	TTCGAA	1 cut(s)	940
BstC8I	GCNNGC	6 cut(s)	17, 730, 955, 1297, 1477, 1507
BstDEI	CTNAG	7 cut(s)	396, 763, 846, 971, 1102, 1344, 1408
BstDSI	CCRYGG	4 cut(s)	75, 516, 999, 1260
BstF5I	GGATG	1 cut(s)	1463
BstFNI	CGCG	7 cut(s)	77, 110, 195, 388, 518, 531, 947
BstH2I	RGCGCY	1 cut(s)	774
BstHHI	GCGC	5 cut(s)	112, 195, 531, 773, 947
BstKTI	GATC	6 cut(s)	204, 246, 444, 525, 645, 1643
BstMBI	GATC	6 cut(s)	201, 243, 441, 522, 642, 1640
BstMCI	CGRYCG	1 cut(s)	16
BstNI	CCWGG	2 cut(s)	1334, 1521
BstSCI	CCNGG	4 cut(s)	645, 1062, 1332, 1519
BstSFI	CTRYAG	2 cut(s)	563, 1311
BstUI	CGCG	7 cut(s)	77, 110, 195, 388, 518, 531, 947
BstV1I	GCAGC	8 cut(s)	427, 549, 558, 829, 996, 1127, 1130, 1621
BstV2I	GAAGAC	2 cut(s)	438, 1309
BstX2I	RGATCY	2 cut(s)	201, 642
BstXI	CCANNNNNNTGG	1 cut(s)	1432
BstYI	RGATCY	2 cut(s)	201, 642
BstZI	CGGCCG	1 cut(s)	13
Bsu36I	CCTNAGG	2 cut(s)	763, 971
BsuRI	GGCC	4 cut(s)	15, 141, 728, 1332
BtgI	CCRYGG	4 cut(s)	75, 516, 999, 1260
BtsCI	GGATG	1 cut(s)	1463
BtsI	GCAGTG	1 cut(s)	1363
BtsIMutI	CAGTG	3 cut(s)	617, 987, 1363
Cac8I	GCNNGC	6 cut(s)	17, 730, 955, 1297, 1477, 1507
CaiI	CAGNNNCTG	1 cut(s)	571
CfoI	GCGC	5 cut(s)	112, 195, 531, 773, 947
Cfr10I	RCCGGY	3 cut(s)	15, 186, 1328
Cfr13I	GGNCC	3 cut(s)	79, 662, 1336
Cfr42I	CCGCGG	2 cut(s)	78, 519
CpoI	CGGWCCG	1 cut(s)	662
CseI	GACGC	3 cut(s)	116, 377, 462
Csp6I	GTAC	4 cut(s)	688, 967, 1196, 1437
CspAI	ACCGGT	1 cut(s)	186
CspI	CGGWCCG	1 cut(s)	662
CviQI	GTAC	4 cut(s)	688, 967, 1196, 1437
DdeI	CTNAG	7 cut(s)	396, 763, 846, 971, 1102, 1344, 1408
DinI	GGCGCC	1 cut(s)	772
DpnI	GATC	6 cut(s)	203, 245, 443, 524, 644, 1642
DpnII	GATC	6 cut(s)	201, 243, 441, 522, 642, 1640
DraI	TTTAAA	1 cut(s)	1527
EaeI	YGGCCR	3 cut(s)	13, 726, 1330
EagI	CGGCCG	1 cut(s)	13
Eam1104I	CTCTTC	4 cut(s)	149, 269, 678, 791
EarI	CTCTTC	4 cut(s)	149, 269, 678, 791
EciI	GGCGGA	1 cut(s)	61
Ecl136II	GAGCTC	3 cut(s)	484, 809, 1359
EclXI	CGGCCG	1 cut(s)	13
Eco130I	CCWWGG	3 cut(s)	96, 999, 1260
Eco24I	GRGCYC	3 cut(s)	486, 811, 1361
Eco32I	GATATC	1 cut(s)	1017
Eco47I	GGWCC	3 cut(s)	79, 662, 1336
Eco52I	CGGCCG	1 cut(s)	13
Eco53kI	GAGCTC	3 cut(s)	484, 809, 1359
Eco81I	CCTNAGG	2 cut(s)	763, 971
Eco88I	CYCGRG	1 cut(s)	497
EcoICRI	GAGCTC	3 cut(s)	484, 809, 1359
EcoO109I	RGGNCCY	1 cut(s)	1336
EcoRI	GAATTC	2 cut(s)	1043, 1058
EcoRII	CCWGG	2 cut(s)	1332, 1519
EcoRV	GATATC	1 cut(s)	1017
EcoT14I	CCWWGG	3 cut(s)	96, 999, 1260
EcoT38I	GRGCYC	3 cut(s)	486, 811, 1361
EgeI	GGCGCC	1 cut(s)	772
EheI	GGCGCC	1 cut(s)	772
ErhI	CCWWGG	3 cut(s)	96, 999, 1260
FaqI	GGGAC	2 cut(s)	515, 1664
FauI	CCCGC	1 cut(s)	345
FokI	GGATG	1 cut(s)	1450
FriOI	GRGCYC	3 cut(s)	486, 811, 1361
FspBI	CTAG	5 cut(s)	605, 912, 1568, 1613, 1644
GlaI	GCGC	5 cut(s)	111, 194, 530, 772, 946
GsuI	CTGGAG	2 cut(s)	599, 1011
HaeII	RGCGCY	1 cut(s)	774
HaeIII	GGCC	4 cut(s)	15, 141, 728, 1332
HgaI	GACGC	3 cut(s)	116, 377, 462
HhaI	GCGC	5 cut(s)	112, 195, 531, 773, 947
Hin1I	GRCGYC	3 cut(s)	363, 473, 771
Hin6I	GCGC	5 cut(s)	110, 193, 529, 771, 945
HinP1I	GCGC	5 cut(s)	110, 193, 529, 771, 945
HindIII	AAGCTT	1 cut(s)	1226
HphI	GGTGA	4 cut(s)	124, 154, 1198, 1405
Hpy166II	GTNNAC	2 cut(s)	509, 1675
Hpy188I	TCNGA	4 cut(s)	106, 241, 1105, 1347
Hpy188III	TCNNGA	6 cut(s)	181, 371, 462, 865, 1040, 1089
Hpy8I	GTNNAC	2 cut(s)	509, 1675
HpyAV	CCTTC	7 cut(s)	293, 328, 1058, 1130, 1186, 1409, 1431
HpyCH4III	ACNGT	5 cut(s)	166, 506, 612, 1441, 1692
HpyCH4IV	ACGT	3 cut(s)	225, 363, 1233
HpyF3I	CTNAG	7 cut(s)	396, 763, 846, 971, 1102, 1344, 1408
HpySE526I	ACGT	3 cut(s)	225, 363, 1233
Hsp92I	GRCGYC	3 cut(s)	363, 473, 771
HspAI	GCGC	5 cut(s)	110, 193, 529, 771, 945
KasI	GGCGCC	1 cut(s)	770
Kpn2I	TCCGGA	1 cut(s)	461
KroI	GCCGGC	1 cut(s)	15
KroNI	GCCGGC	1 cut(s)	17
KspI	CCGCGG	2 cut(s)	78, 519
Kzo9I	GATC	6 cut(s)	201, 243, 441, 522, 642, 1640
LmnI	GCTCC	4 cut(s)	331, 814, 1559, 1576
Lsp1109I	GCAGC	8 cut(s)	427, 549, 558, 829, 996, 1127, 1130, 1621
LweI	GCATC	5 cut(s)	874, 985, 1092, 1472, 1610
MaeI	CTAG	5 cut(s)	605, 912, 1568, 1613, 1644
MaeII	ACGT	3 cut(s)	225, 363, 1233
MaeIII	GTNAC	4 cut(s)	148, 229, 1153, 1411
MalI	GATC	6 cut(s)	203, 245, 443, 524, 644, 1642
MboI	GATC	6 cut(s)	201, 243, 441, 522, 642, 1640
MfeI	CAATTG	1 cut(s)	813
MflI	RGATCY	2 cut(s)	201, 642
MhlI	GDGCHC	5 cut(s)	360, 486, 811, 1273, 1361
MlsI	TGGCCA	1 cut(s)	728
MluCI	AATT	7 cut(s)	85, 813, 877, 1043, 1058, 1126, 1548
MluNI	TGGCCA	1 cut(s)	728
Mly113I	GGCGCC	1 cut(s)	771
MlyI	GAGTC	4 cut(s)	458, 663, 788, 1508
MmeI	TCCRAC	2 cut(s)	129, 1423
Mox20I	TGGCCA	1 cut(s)	728
MroI	TCCGGA	1 cut(s)	461
MroNI	GCCGGC	1 cut(s)	15
MroXI	GAANNNNTTC	2 cut(s)	936, 1047
MscI	TGGCCA	1 cut(s)	728
MseI	TTAA	3 cut(s)	1230, 1284, 1526
MslI	CAYNNNNRTG	3 cut(s)	1004, 1010, 1430
Msp20I	TGGCCA	1 cut(s)	728
MspA1I	CMGCKG	4 cut(s)	77, 518, 577, 667
MspR9I	CCNGG	4 cut(s)	647, 1064, 1334, 1521
MssI	GTTTAAAC	1 cut(s)	1527
MunI	CAATTG	1 cut(s)	813
MvaI	CCWGG	2 cut(s)	1334, 1521
MvnI	CGCG	7 cut(s)	77, 110, 195, 388, 518, 531, 947
NaeI	GCCGGC	1 cut(s)	17
NarI	GGCGCC	1 cut(s)	771
NciI	CCSGG	2 cut(s)	647, 1064
NcoI	CCATGG	2 cut(s)	999, 1260
NdeII	GATC	6 cut(s)	201, 243, 441, 522, 642, 1640
NgoMIV	GCCGGC	1 cut(s)	15
NlaIV	GGNNCC	5 cut(s)	81, 696, 772, 824, 1338
NmeAIII	GCCGAG	2 cut(s)	267, 799
NmuCI	GTSAC	3 cut(s)	148, 229, 1411
NspV	TTCGAA	1 cut(s)	940
PcsI	WCGNNNNNNNCGW	4 cut(s)	351, 360, 369, 441
PdiI	GCCGGC	1 cut(s)	17
PdmI	GAANNNNTTC	2 cut(s)	936, 1047
PfeI	GAWTC	7 cut(s)	374, 488, 622, 744, 937, 961, 1214
PflFI	GACNNNGTC	2 cut(s)	308, 472
PfoI	TCCNGGA	1 cut(s)	1062
PinAI	ACCGGT	1 cut(s)	186
PleI	GAGTC	4 cut(s)	457, 662, 788, 1508
PluTI	GGCGCC	1 cut(s)	774
PmeI	GTTTAAAC	1 cut(s)	1527
PpsI	GAGTC	4 cut(s)	457, 662, 788, 1508
Ppu21I	YACGTR	1 cut(s)	226
PpuMI	RGGWCCY	1 cut(s)	1336
Psp124BI	GAGCTC	3 cut(s)	486, 811, 1361
Psp5II	RGGWCCY	1 cut(s)	1336
Psp6I	CCWGG	2 cut(s)	1332, 1519
PspGI	CCWGG	2 cut(s)	1332, 1519
PspN4I	GGNNCC	5 cut(s)	81, 696, 772, 824, 1338
PspPI	GGNCC	3 cut(s)	79, 662, 1336
PspPPI	RGGWCCY	1 cut(s)	1336
PstI	CTGCAG	2 cut(s)	567, 1315
PstNI	CAGNNNCTG	1 cut(s)	571
PsuI	RGATCY	2 cut(s)	201, 642
PsyI	GACNNNGTC	2 cut(s)	308, 472
RsaI	GTAC	4 cut(s)	689, 968, 1197, 1438
RsaNI	GTAC	4 cut(s)	688, 967, 1196, 1437
RseI	CAYNNNNRTG	3 cut(s)	1004, 1010, 1430
Rsr2I	CGGWCCG	1 cut(s)	662
RsrII	CGGWCCG	1 cut(s)	662
SacI	GAGCTC	3 cut(s)	486, 811, 1361
SacII	CCGCGG	2 cut(s)	78, 519
SaqAI	TTAA	3 cut(s)	1230, 1284, 1526
Sau3AI	GATC	6 cut(s)	201, 243, 441, 522, 642, 1640
Sau96I	GGNCC	3 cut(s)	79, 662, 1336
SchI	GAGTC	4 cut(s)	458, 663, 788, 1508
ScrFI	CCNGG	4 cut(s)	647, 1064, 1334, 1521
SduI	GDGCHC	5 cut(s)	360, 486, 811, 1273, 1361
SfaNI	GCATC	5 cut(s)	874, 985, 1092, 1472, 1610
SfcI	CTRYAG	2 cut(s)	563, 1311
SfoI	GGCGCC	1 cut(s)	772
Sfr303I	CCGCGG	2 cut(s)	78, 519
SfuI	TTCGAA	1 cut(s)	940
SgrBI	CCGCGG	2 cut(s)	78, 519
SinI	GGWCC	3 cut(s)	79, 662, 1336
SmiMI	CAYNNNNRTG	3 cut(s)	1004, 1010, 1430
SmlI	CTYRAG	2 cut(s)	851, 1531
SmoI	CTYRAG	2 cut(s)	851, 1531
Sse9I	AATT	7 cut(s)	85, 813, 877, 1043, 1058, 1126, 1548
SspDI	GGCGCC	1 cut(s)	770
SspI	AATATT	2 cut(s)	1303, 1351
SspMI	CTAG	5 cut(s)	605, 912, 1568, 1613, 1644
SstI	GAGCTC	3 cut(s)	486, 811, 1361
StyD4I	CCNGG	4 cut(s)	645, 1062, 1332, 1519
StyI	CCWWGG	3 cut(s)	96, 999, 1260
TaaI	ACNGT	5 cut(s)	166, 506, 612, 1441, 1692
TaiI	ACGT	3 cut(s)	228, 366, 1236
TasI	AATT	7 cut(s)	85, 813, 877, 1043, 1058, 1126, 1548
TatI	WGTACW	1 cut(s)	687
TfiI	GAWTC	7 cut(s)	374, 488, 622, 744, 937, 961, 1214
Tru1I	TTAA	3 cut(s)	1230, 1284, 1526
Tru9I	TTAA	3 cut(s)	1230, 1284, 1526
TscAI	CASTG	3 cut(s)	617, 994, 1370
TseFI	GTSAC	3 cut(s)	148, 229, 1411
TseI	GCWGC	8 cut(s)	415, 562, 571, 842, 984, 1115, 1118, 1609
Tsp45I	GTSAC	3 cut(s)	148, 229, 1411
TspDTI	ATGAA	5 cut(s)	969, 1022, 1071, 1309, 1643
TspGWI	ACGGA	4 cut(s)	262, 693, 725, 820
TspRI	CASTG	3 cut(s)	617, 994, 1370
Tth111I	GACNNNGTC	2 cut(s)	308, 472
VpaK11BI	GGWCC	3 cut(s)	79, 662, 1336
XapI	RAATTY	3 cut(s)	85, 1043, 1058
XmnI	GAANNNNTTC	2 cut(s)	936, 1047
XspI	CTAG	5 cut(s)	605, 912, 1568, 1613, 1644
ZraI	GACGTC	1 cut(s)	364

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.