Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0004124

Physical Location & Seq

Genomic Coordinates Reverse (-)

19046960 .. 19050981

Gene Structure 4022 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1821 bp

ATGGCTCGCGGCAAAGATAATTCACTCGCTCCTGGGTTCCGATTCCACCCAACCGATGAAGAACTAGTCTGGTACTATCTGAAGCGCAAGGTCTCCGGCAAGAACTTCCGATTCGACCCCATCTCGGTCGTCGACATCTACAAGACTGAGCCTTGGGACCTCCCTGGCAAGTCGAAGCTGAAGACTAGGGACTTGGAGTGGTACTTTTTCAGTTTCCTAGATAAGAAGTATGGGAATTCGTCCAGGACGAATCGGGCTACTGAAAAAGGGTACTGGAAGACTACGGGTAAGGACCGTCCGGTTAAACATAATTCCCGGGATGTTGGGATGAAGAAGACGCTGGTTTTTCATAGCGGGCGCGCCCCCACCGGTGCCAGAACCAATTGGGTTATGCATGAGTATCGCCTTTCCAATGAGGAATTGGAGAAAGCTGGAATTCAACAGAAGGATCGATATGTGCTTTGTAGGATATTCCAGAAGAGTGGCACGGGACCGAAGAATGGGGAGAAGTATGGCGCACCGGTTATGGAGGAGGAATGGGACGATGATGACGTGACTGGTGTACCTGGTGAGGAGGCGGCTGCTAATGTAGTGGTACTTAGCGAGGAGCCACATGTTGAAGCAATTGGTGTCAACGATGGGGCTTATGTTGAAGCATTTGACCTTGATCAGAATCTTGACATAGGAATTCCATCTGAAAGTGCACCTACTCCATCGAACTTCTATTATGGGGAGACGAGCCACTACTTTGAGCATTCTGGGGACTTTGTTGAAGATGATACAAAGGCTGTGATAGGCACTGGGGAAACTTCGGAATACTGTGGAGACCAGATGTTCTTTAACTACCCAGAGCATCATGAGACGGTTGGAAATCCAGTAAAAAATGAATATATGACCTCACAAAGTCCTGAGGACCTAAAGTTTGTTGACTTGCCAGAGCACAACGAGGCTGATGCAAAATCAGTCAAGGATGAATGCTTTCTTGAACCAAGCAATGATGCAAATCCAGCTGTTAATTACTCACTTAATGAACCGTATTTGAATGCTACGGAGAATACGCCAATTGGTGATGGGCTATTCCTTGAAGCTAAAGATCTTTCAAATCCAGTCGAGTCAACTGCAGGTTTTGACATGCTTGATGAGTACCTTACGTACTTTGATGCCAATGATGACATCTCTCAGTATATTGATTTCGATTCTTGTGGAATGATGGGGGTTGAAGACTATGTTCCTGACGAAGCTCCAGCTGACCAGAAGCTTGTGAATGGTGAGACTGAGCCACAACCAATGGGAGGTGAACATGTACAACCAGAGCCACAGCCAATGGGAGGCGAACATCTTGCACAACCAGTGGATACTGATGATGCATCTTCGTCAAAGAAAATGGCGGAGTTCAAGTTTGAGTCAGATGGTAACTACCCCTTCATCAAAAAGGCAAGTCACATGATGTTGGGCAGCATACCTGCTCCACCTGCATTTGCTTCGGAGTTCCCTGGTAAAGAGGCAATGCGTAGGTTAAACTCTGGTGCAGCATCTTCCAGTTCGGTTCATGTCACTGCTGGCATGATTAGAATTAGAGACATAACTTCAAGCGACAACAGGATGGACTGGTCTTTTGGAAAGGATGGGGTTGTCAACCTTGTCTTTTCTGTTCAGCTGTCGCAGAATGACGGAAACTCTGGCAATCTGGTGCCAGTCGGTGGCTCACTCTCTGGAAAGACGGGATGTGTGGTGATGCGGGGCTGGTTTTTGTTTATGTTTTTCTGGGTCCTATTTCTTTCCATGAGTTTAAAAATCGGGAGCTATATCTATACCAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006950 GO:0007275 GO:0007568 GO:0008150 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009819 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0010035 GO:0010150 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0090693 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2000377 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

607

Amino Acids

67.63

Weight (kDa)

4.72

Isoelectric Point (pI)

32.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	11 - 136	6.5e-47	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10500 AT3G10500 AT5G04410
fragaria_vesca	FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501 FvH4_7g06501
malus_domestica	MD02G1243200.v1.1 MD02G1243600.v1.1 MD02G1243800.v1.1 MD07G1073200.v1.1
prunus_persica	Prupe.2G091500_v2.0.a1
pyrus_communis	pycom02g20980 pycom07g05650 pycom07g05660 pycom07g05670
rosa_chinensis	RchiOBHm_Chr1g0334901
rosa_laevigata	RLG00000029411
rosa_multiflora	Rmu_co8457141.1_g000001 Rmu_sc0000574.1_g000049
rosa_roxburghii	Rroxscaffold_1G00037320 Rroxscaffold_4G00316370
rosa_rugosa	Rorug01G0117800
rosa_samantha	Rh1AG141300 Rh1BG108800 Rh1CG133200 Rh1DG145700 Rh5CG119700 Rh5DG106800
rosa_wichuraiana	Rw1G011710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1480
Acc36I	ACCTGC	3 cut(s)	1112, 1471, 1480
AccB1I	GGYRCC	2 cut(s)	371, 1690
AccB7I	CCANNNNNTGG	1 cut(s)	1700
AccI	GTMKAC	1 cut(s)	132
AccII	CGCG	2 cut(s)	9, 360
AciI	CCGC	5 cut(s)	9, 354, 578, 1388, 1738
AclWI	GGATC	1 cut(s)	456
AcsI	RAATTY	3 cut(s)	235, 435, 687
AcuI	CTGAAG	2 cut(s)	101, 200
AfaI	GTAC	8 cut(s)	74, 203, 272, 564, 597, 1145, 1154, 1305
AfiI	CCNNNNNNNGG	5 cut(s)	124, 500, 1292, 1328, 1700
AflIII	ACRYGT	2 cut(s)	613, 1300
AgeI	ACCGGT	2 cut(s)	368, 520
AhlI	ACTAGT	1 cut(s)	64
AjiI	CACGTC	1 cut(s)	553
AjnI	CCWGG	6 cut(s)	31, 163, 242, 565, 1492, 1814
AluBI	AGCT	9 cut(s)	178, 431, 1010, 1088, 1241, 1247, 1258, 1657, 1803
AluI	AGCT	9 cut(s)	178, 431, 1010, 1088, 1241, 1247, 1258, 1657, 1803
Alw21I	GWGCWC	2 cut(s)	706, 942
Alw26I	GTCTC	6 cut(s)	97, 728, 819, 854, 1265, 1572
Alw44I	GTGCAC	1 cut(s)	702
AlwI	GGATC	1 cut(s)	456
Ama87I	CYCGRG	1 cut(s)	315
ApaLI	GTGCAC	1 cut(s)	702
ApeKI	GCWGC	3 cut(s)	581, 1455, 1529
ApoI	RAATTY	3 cut(s)	235, 435, 687
ArsI	GACNNNNNNTTYG	4 cut(s)	905, 937, 1598, 1630
AscI	GGCGCGCC	1 cut(s)	358
AsiGI	ACCGGT	2 cut(s)	368, 520
Asp700I	GAANNNNTTC	1 cut(s)	978
AspLEI	GCGC	4 cut(s)	87, 360, 362, 518
AspS9I	GGNCC	5 cut(s)	157, 292, 491, 913, 1768
AsuC2I	CCSGG	2 cut(s)	316, 317
AsuHPI	GGTGA	5 cut(s)	581, 1079, 1280, 1307, 1744
AvaI	CYCGRG	1 cut(s)	315
AvaII	GGWCC	5 cut(s)	157, 292, 491, 913, 1768
AxyI	CCTNAGG	1 cut(s)	909
BaeGI	GKGCMC	1 cut(s)	706
BaeI	ACNNNNGTAYC	2 cut(s)	546, 579
BanI	GGYRCC	2 cut(s)	371, 1690
BbsI	GAAGAC	4 cut(s)	188, 284, 341, 1227
Bbv12I	GWGCWC	2 cut(s)	706, 942
BbvI	GCAGC	3 cut(s)	568, 1467, 1541
BccI	CCATC	9 cut(s)	128, 632, 700, 721, 1064, 1204, 1403, 1597, 1619
BciT130I	CCWGG	6 cut(s)	33, 165, 244, 567, 1494, 1816
BciVI	GTATCC	1 cut(s)	1348
BclI	TGATCA	1 cut(s)	667
BcnI	CCSGG	2 cut(s)	316, 317
BcoDI	GTCTC	6 cut(s)	97, 728, 819, 854, 1265, 1572
BcuI	ACTAGT	1 cut(s)	64
BfaI	CTAG	3 cut(s)	65, 186, 218
BfmI	CTRYAG	1 cut(s)	1119
BfuAI	ACCTGC	3 cut(s)	1112, 1471, 1480
BfuI	GTATCC	1 cut(s)	1348
BglII	AGATCT	1 cut(s)	1093
BisI	GCNGC	5 cut(s)	10, 579, 582, 1456, 1530
BlsI	GCNGC	5 cut(s)	11, 580, 583, 1457, 1531
Bme1390I	CCNGG	8 cut(s)	33, 165, 244, 316, 317, 567, 1494, 1816
Bme18I	GGWCC	5 cut(s)	157, 292, 491, 913, 1768
BmeT110I	CYCGRG	1 cut(s)	315
BmgBI	CACGTC	1 cut(s)	553
BmgT120I	GGNCC	5 cut(s)	157, 292, 491, 913, 1768
BmiI	GGNNCC	7 cut(s)	38, 158, 373, 492, 609, 1692, 1769
BmrFI	CCNGG	8 cut(s)	33, 165, 244, 316, 317, 567, 1494, 1816
BmrI	ACTGGG	1 cut(s)	810
BmsI	GCATC	8 cut(s)	862, 943, 988, 1150, 1354, 1376, 1541, 1725
BmuI	ACTGGG	1 cut(s)	810
BpiI	GAAGAC	4 cut(s)	188, 284, 341, 1227
BpmI	CTGGAG	1 cut(s)	1227
BpuMI	CCSGG	2 cut(s)	316, 317
Bsa29I	ATCGAT	1 cut(s)	451
BsaAI	YACGTR	1 cut(s)	1152
BsaBI	GATNNNNATC	2 cut(s)	672, 1002
BsaI	GGTCTC	2 cut(s)	97, 819
BsaJI	CCNNGG	5 cut(s)	32, 152, 163, 315, 1492
BsaWI	WCCGGW	3 cut(s)	298, 368, 520
BsaXI	ACNNNNNCTCC	2 cut(s)	1382, 1412
Bsc4I	CCNNNNNNNGG	5 cut(s)	124, 500, 1292, 1328, 1700
Bse118I	RCCGGY	2 cut(s)	368, 520
Bse1I	ACTGG	9 cut(s)	278, 562, 805, 875, 1106, 1349, 1539, 1613, 1694
Bse21I	CCTNAGG	1 cut(s)	909
Bse3DI	GCAATG	2 cut(s)	1000, 1512
Bse8I	GATNNNNATC	2 cut(s)	672, 1002
BseBI	CCWGG	6 cut(s)	33, 165, 244, 567, 1494, 1816
BseCI	ATCGAT	1 cut(s)	451
BseDI	CCNNGG	5 cut(s)	32, 152, 163, 315, 1492
BseGI	GGATG	6 cut(s)	325, 333, 976, 1608, 1630, 1730
BseJI	GATNNNNATC	2 cut(s)	672, 1002
BseLI	CCNNNNNNNGG	5 cut(s)	124, 500, 1292, 1328, 1700
BseMI	GCAATG	2 cut(s)	1000, 1512
BseMII	CTCAG	4 cut(s)	138, 900, 1193, 1266
BseNI	ACTGG	9 cut(s)	278, 562, 805, 875, 1106, 1349, 1539, 1613, 1694
BsePI	GCGCGC	1 cut(s)	358
BseRI	GAGGAG	3 cut(s)	545, 587, 620
BseSI	GKGCMC	1 cut(s)	706
BseXI	GCAGC	3 cut(s)	568, 1467, 1541
BsgI	GTGCAG	1 cut(s)	1548
Bsh1236I	CGCG	2 cut(s)	9, 360
Bsh1285I	CGRYCG	1 cut(s)	129
BshNI	GGYRCC	2 cut(s)	371, 1690
BshTI	ACCGGT	2 cut(s)	368, 520
BshVI	ATCGAT	1 cut(s)	451
BsiEI	CGRYCG	1 cut(s)	129
BsiHKAI	GWGCWC	2 cut(s)	706, 942
BsiHKCI	CYCGRG	1 cut(s)	315
BsiSI	CCGG	5 cut(s)	96, 299, 316, 369, 521
BslFI	GGGAC	5 cut(s)	170, 203, 504, 554, 776
BslI	CCNNNNNNNGG	5 cut(s)	124, 500, 1292, 1328, 1700
BsmAI	GTCTC	6 cut(s)	97, 728, 819, 854, 1265, 1572
BsmBI	CGTCTC	2 cut(s)	728, 854
BsmFI	GGGAC	5 cut(s)	170, 203, 504, 554, 776
BsmI	GAATGC	3 cut(s)	754, 980, 1048
Bso31I	GGTCTC	2 cut(s)	97, 819
BsoBI	CYCGRG	1 cut(s)	315
Bsp1286I	GDGCHC	2 cut(s)	706, 942
Bsp1407I	TGTACA	1 cut(s)	1303
Bsp143I	GATC	3 cut(s)	448, 667, 1093
BspACI	CCGC	5 cut(s)	9, 354, 578, 1388, 1738
BspCNI	CTCAG	4 cut(s)	139, 901, 1192, 1267
BspDI	ATCGAT	1 cut(s)	451
BspFNI	CGCG	2 cut(s)	9, 360
BspHI	TCATGA	1 cut(s)	856
BspLI	GGNNCC	7 cut(s)	38, 158, 373, 492, 609, 1692, 1769
BspMAI	CTGCAG	1 cut(s)	1123
BspMI	ACCTGC	3 cut(s)	1112, 1471, 1480
BspPI	GGATC	1 cut(s)	456
BspT107I	GGYRCC	2 cut(s)	371, 1690
BspTNI	GGTCTC	2 cut(s)	97, 819
BsrDI	GCAATG	2 cut(s)	1000, 1512
BsrFI	RCCGGY	2 cut(s)	368, 520
BsrGI	TGTACA	1 cut(s)	1303
BsrI	ACTGG	9 cut(s)	278, 562, 805, 875, 1106, 1349, 1539, 1613, 1694
BssAI	RCCGGY	2 cut(s)	368, 520
BssECI	CCNNGG	5 cut(s)	32, 152, 163, 315, 1492
BssHII	GCGCGC	1 cut(s)	358
BssMI	GATC	3 cut(s)	448, 667, 1093
BssT1I	CCWWGG	1 cut(s)	152
Bst2UI	CCWGG	6 cut(s)	33, 165, 244, 567, 1494, 1816
Bst4CI	ACNGT	4 cut(s)	296, 821, 865, 1035
Bst6I	CTCTTC	1 cut(s)	473
BstAUI	TGTACA	1 cut(s)	1303
BstBAI	YACGTR	1 cut(s)	1152
BstC8I	GCNNGC	4 cut(s)	7, 356, 360, 1561
BstDEI	CTNAG	5 cut(s)	147, 599, 909, 1179, 1275
BstF5I	GGATG	6 cut(s)	325, 333, 976, 1608, 1630, 1730
BstFNI	CGCG	2 cut(s)	9, 360
BstHHI	GCGC	4 cut(s)	87, 360, 362, 518
BstKTI	GATC	3 cut(s)	451, 670, 1096
BstMAI	GTCTC	6 cut(s)	97, 728, 819, 854, 1265, 1572
BstMBI	GATC	3 cut(s)	448, 667, 1093
BstMCI	CGRYCG	1 cut(s)	129
BstMWI	GCNNNNNNNGC	2 cut(s)	1007, 1472
BstNI	CCWGG	6 cut(s)	33, 165, 244, 567, 1494, 1816
BstNSI	RCATGY	3 cut(s)	617, 1135, 1304
BstSCI	CCNGG	8 cut(s)	31, 163, 242, 314, 315, 565, 1492, 1814
BstSFI	CTRYAG	1 cut(s)	1119
BstSLI	GKGCMC	1 cut(s)	706
BstSNI	TACGTA	1 cut(s)	1152
BstUI	CGCG	2 cut(s)	9, 360
BstV1I	GCAGC	3 cut(s)	568, 1467, 1541
BstV2I	GAAGAC	4 cut(s)	188, 284, 341, 1227
BstX2I	RGATCY	1 cut(s)	1093
BstXI	CCANNNNNNTGG	1 cut(s)	482
BstYI	RGATCY	1 cut(s)	1093
Bsu15I	ATCGAT	1 cut(s)	451
Bsu36I	CCTNAGG	1 cut(s)	909
BsuI	GTATCC	1 cut(s)	1348
BsuTUI	ATCGAT	1 cut(s)	451
BtrI	CACGTC	1 cut(s)	553
BtsCI	GGATG	6 cut(s)	325, 333, 976, 1608, 1630, 1730
BtsI	GCAGTG	1 cut(s)	1554
BtsIMutI	CAGTG	3 cut(s)	798, 1356, 1554
BveI	ACCTGC	3 cut(s)	1112, 1471, 1480
Cac8I	GCNNGC	4 cut(s)	7, 356, 360, 1561
CciI	TCATGA	1 cut(s)	856
CfoI	GCGC	4 cut(s)	87, 360, 362, 518
Cfr10I	RCCGGY	2 cut(s)	368, 520
Cfr13I	GGNCC	5 cut(s)	157, 292, 491, 913, 1768
Cfr9I	CCCGGG	1 cut(s)	315
ClaI	ATCGAT	1 cut(s)	451
CseI	GACGC	1 cut(s)	346
CsiI	ACCWGGT	2 cut(s)	565, 1814
Csp6I	GTAC	8 cut(s)	73, 202, 271, 563, 596, 1144, 1153, 1304
CspAI	ACCGGT	2 cut(s)	368, 520
CviAII	CATG	9 cut(s)	395, 614, 857, 1132, 1301, 1444, 1550, 1564, 1783
CviQI	GTAC	8 cut(s)	73, 202, 271, 563, 596, 1144, 1153, 1304
DdeI	CTNAG	5 cut(s)	147, 599, 909, 1179, 1275
DpnI	GATC	3 cut(s)	450, 669, 1095
DpnII	GATC	3 cut(s)	448, 667, 1093
DraI	TTTAAA	1 cut(s)	1791
Eam1104I	CTCTTC	1 cut(s)	473
EarI	CTCTTC	1 cut(s)	473
EciI	GGCGGA	1 cut(s)	1403
Eco105I	TACGTA	1 cut(s)	1152
Eco130I	CCWWGG	1 cut(s)	152
Eco31I	GGTCTC	2 cut(s)	97, 819
Eco47I	GGWCC	5 cut(s)	157, 292, 491, 913, 1768
Eco57I	CTGAAG	2 cut(s)	101, 200
Eco81I	CCTNAGG	1 cut(s)	909
Eco88I	CYCGRG	1 cut(s)	315
EcoO109I	RGGNCCY	3 cut(s)	157, 913, 1768
EcoRI	GAATTC	3 cut(s)	235, 435, 687
EcoRII	CCWGG	6 cut(s)	31, 163, 242, 565, 1492, 1814
EcoT14I	CCWWGG	1 cut(s)	152
EcoT22I	ATGCAT	2 cut(s)	396, 1369
ErhI	CCWWGG	1 cut(s)	152
Esp3I	CGTCTC	2 cut(s)	728, 854
FaeI	CATG	9 cut(s)	398, 617, 860, 1135, 1304, 1447, 1553, 1567, 1786
FaqI	GGGAC	5 cut(s)	170, 203, 504, 554, 776
FatI	CATG	9 cut(s)	394, 613, 856, 1131, 1300, 1443, 1549, 1563, 1782
FauI	CCCGC	2 cut(s)	347, 1731
FbaI	TGATCA	1 cut(s)	667
FblI	GTMKAC	1 cut(s)	132
Fnu4HI	GCNGC	5 cut(s)	10, 579, 582, 1456, 1530
FokI	GGATG	6 cut(s)	332, 340, 983, 1615, 1637, 1737
Fsp4HI	GCNGC	5 cut(s)	10, 579, 582, 1456, 1530
FspBI	CTAG	3 cut(s)	65, 186, 218
GlaI	GCGC	4 cut(s)	86, 359, 361, 517
GluI	GCNGC	5 cut(s)	10, 579, 582, 1456, 1530
GsuI	CTGGAG	1 cut(s)	1227
HapII	CCGG	5 cut(s)	96, 299, 316, 369, 521
HgaI	GACGC	1 cut(s)	346
HhaI	GCGC	4 cut(s)	87, 360, 362, 518
Hin1II	CATG	9 cut(s)	398, 617, 860, 1135, 1304, 1447, 1553, 1567, 1786
Hin6I	GCGC	4 cut(s)	85, 358, 360, 516
HinP1I	GCGC	4 cut(s)	85, 358, 360, 516
HincII	GTYRAC	5 cut(s)	133, 634, 928, 1116, 1636
HindII	GTYRAC	5 cut(s)	133, 634, 928, 1116, 1636
HindIII	AAGCTT	1 cut(s)	1256
HinfI	GANTC	7 cut(s)	42, 111, 250, 673, 1112, 1196, 1403
HpaII	CCGG	5 cut(s)	96, 299, 316, 369, 521
HphI	GGTGA	5 cut(s)	581, 1079, 1280, 1307, 1744
Hpy166II	GTNNAC	8 cut(s)	133, 563, 634, 704, 928, 1116, 1298, 1636
Hpy188I	TCNGA	8 cut(s)	41, 81, 110, 672, 697, 814, 1408, 1486
Hpy188III	TCNNGA	8 cut(s)	475, 677, 857, 908, 983, 1232, 1713, 1798
Hpy8I	GTNNAC	8 cut(s)	133, 563, 634, 704, 928, 1116, 1298, 1636
Hpy99I	CGWCG	1 cut(s)	134
HpyAV	CCTTC	2 cut(s)	439, 1432
HpyCH4III	ACNGT	4 cut(s)	296, 821, 865, 1035
HpyCH4IV	ACGT	2 cut(s)	552, 1151
HpyCH4V	TGCA	9 cut(s)	394, 704, 956, 1001, 1121, 1343, 1367, 1475, 1529
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1007, 1472
HpyF3I	CTNAG	5 cut(s)	147, 599, 909, 1179, 1275
HpySE526I	ACGT	2 cut(s)	552, 1151
Hsp92II	CATG	9 cut(s)	398, 617, 860, 1135, 1304, 1447, 1553, 1567, 1786
HspAI	GCGC	4 cut(s)	85, 358, 360, 516
Ksp22I	TGATCA	1 cut(s)	667
Kzo9I	GATC	3 cut(s)	448, 667, 1093
LmnI	GCTCC	5 cut(s)	34, 607, 1246, 1471, 1800
Lsp1109I	GCAGC	3 cut(s)	568, 1467, 1541
LweI	GCATC	8 cut(s)	862, 943, 988, 1150, 1354, 1376, 1541, 1725
MabI	ACCWGGT	2 cut(s)	565, 1814
MaeI	CTAG	3 cut(s)	65, 186, 218
MaeII	ACGT	2 cut(s)	552, 1151
MaeIII	GTNAC	4 cut(s)	553, 1412, 1439, 1552
MalI	GATC	3 cut(s)	450, 669, 1095
MboI	GATC	3 cut(s)	448, 667, 1093
MfeI	CAATTG	3 cut(s)	382, 624, 1062
MflI	RGATCY	1 cut(s)	1093
MhlI	GDGCHC	2 cut(s)	706, 942
MlyI	GAGTC	2 cut(s)	1121, 1412
MmeI	TCCRAC	1 cut(s)	847
Mph1103I	ATGCAT	2 cut(s)	396, 1369
MroXI	GAANNNNTTC	1 cut(s)	978
MseI	TTAA	6 cut(s)	303, 840, 1014, 1026, 1517, 1790
MspA1I	CMGCKG	3 cut(s)	1010, 1247, 1657
MspI	CCGG	5 cut(s)	96, 299, 316, 369, 521
MspR9I	CCNGG	8 cut(s)	33, 165, 244, 316, 317, 567, 1494, 1816
MunI	CAATTG	3 cut(s)	382, 624, 1062
Mva1269I	GAATGC	3 cut(s)	754, 980, 1048
MvaI	CCWGG	6 cut(s)	33, 165, 244, 567, 1494, 1816
MvnI	CGCG	2 cut(s)	9, 360
MwoI	GCNNNNNNNGC	2 cut(s)	1007, 1472
NciI	CCSGG	2 cut(s)	316, 317
NdeII	GATC	3 cut(s)	448, 667, 1093
NlaIII	CATG	9 cut(s)	398, 617, 860, 1135, 1304, 1447, 1553, 1567, 1786
NlaIV	GGNNCC	7 cut(s)	38, 158, 373, 492, 609, 1692, 1769
NmuCI	GTSAC	3 cut(s)	553, 1439, 1552
NsiI	ATGCAT	2 cut(s)	396, 1369
NspI	RCATGY	3 cut(s)	617, 1135, 1304
PagI	TCATGA	1 cut(s)	856
PalAI	GGCGCGCC	1 cut(s)	358
PaqCI	CACCTGC	1 cut(s)	1480
PauI	GCGCGC	1 cut(s)	358
PciI	ACATGT	2 cut(s)	613, 1300
PcsI	WCGNNNNNNNCGW	2 cut(s)	245, 549
PctI	GAATGC	3 cut(s)	754, 980, 1048
PdmI	GAANNNNTTC	1 cut(s)	978
PfeI	GAWTC	5 cut(s)	42, 111, 250, 673, 1196
PflMI	CCANNNNNTGG	1 cut(s)	1700
PfoI	TCCNGGA	1 cut(s)	242
PinAI	ACCGGT	2 cut(s)	368, 520
PkrI	GCNGC	5 cut(s)	11, 580, 583, 1457, 1531
PleI	GAGTC	2 cut(s)	1120, 1411
PpsI	GAGTC	2 cut(s)	1120, 1411
Ppu21I	YACGTR	1 cut(s)	1152
PpuMI	RGGWCCY	3 cut(s)	157, 913, 1768
PscI	ACATGT	2 cut(s)	613, 1300
Psp5II	RGGWCCY	3 cut(s)	157, 913, 1768
Psp6I	CCWGG	6 cut(s)	31, 163, 242, 565, 1492, 1814
PspGI	CCWGG	6 cut(s)	31, 163, 242, 565, 1492, 1814
PspN4I	GGNNCC	7 cut(s)	38, 158, 373, 492, 609, 1692, 1769
PspPI	GGNCC	5 cut(s)	157, 292, 491, 913, 1768
PspPPI	RGGWCCY	3 cut(s)	157, 913, 1768
PstI	CTGCAG	1 cut(s)	1123
PsuI	RGATCY	1 cut(s)	1093
PteI	GCGCGC	1 cut(s)	358
PvuII	CAGCTG	3 cut(s)	1010, 1247, 1657
RsaI	GTAC	8 cut(s)	74, 203, 272, 564, 597, 1145, 1154, 1305
RsaNI	GTAC	8 cut(s)	73, 202, 271, 563, 596, 1144, 1153, 1304
SalI	GTCGAC	1 cut(s)	131
SaqAI	TTAA	6 cut(s)	303, 840, 1014, 1026, 1517, 1790
SatI	GCNGC	5 cut(s)	10, 579, 582, 1456, 1530
Sau3AI	GATC	3 cut(s)	448, 667, 1093
Sau96I	GGNCC	5 cut(s)	157, 292, 491, 913, 1768
SchI	GAGTC	2 cut(s)	1121, 1412
ScrFI	CCNGG	8 cut(s)	33, 165, 244, 316, 317, 567, 1494, 1816
SduI	GDGCHC	2 cut(s)	706, 942
SexAI	ACCWGGT	2 cut(s)	565, 1814
SfaNI	GCATC	8 cut(s)	862, 943, 988, 1150, 1354, 1376, 1541, 1725
SfcI	CTRYAG	1 cut(s)	1119
SgrAI	CRCCGGYG	1 cut(s)	368
SgsI	GGCGCGCC	1 cut(s)	358
SinI	GGWCC	5 cut(s)	157, 292, 491, 913, 1768
SmaI	CCCGGG	1 cut(s)	317
SnaBI	TACGTA	1 cut(s)	1152
SpeI	ACTAGT	1 cut(s)	64
SsiI	CCGC	5 cut(s)	9, 354, 578, 1388, 1738
SspMI	CTAG	3 cut(s)	65, 186, 218
StyD4I	CCNGG	8 cut(s)	31, 163, 242, 314, 315, 565, 1492, 1814
StyI	CCWWGG	1 cut(s)	152
TaaI	ACNGT	4 cut(s)	296, 821, 865, 1035
TaiI	ACGT	2 cut(s)	555, 1154
TaqI	TCGA	7 cut(s)	114, 132, 173, 451, 716, 1110, 1194
TaqII	GACCGA	2 cut(s)	115, 508
TatI	WGTACW	1 cut(s)	1303
TauI	GCSGC	2 cut(s)	12, 581
TfiI	GAWTC	5 cut(s)	42, 111, 250, 673, 1196
Tru1I	TTAA	6 cut(s)	303, 840, 1014, 1026, 1517, 1790
Tru9I	TTAA	6 cut(s)	303, 840, 1014, 1026, 1517, 1790
TscAI	CASTG	3 cut(s)	805, 1356, 1561
TseFI	GTSAC	3 cut(s)	553, 1439, 1552
TseI	GCWGC	3 cut(s)	581, 1455, 1529
Tsp45I	GTSAC	3 cut(s)	553, 1439, 1552
TspDTI	ATGAA	8 cut(s)	72, 338, 344, 900, 987, 1044, 1414, 1538
TspGWI	ACGGA	2 cut(s)	1064, 1686
TspMI	CCCGGG	1 cut(s)	315
TspRI	CASTG	3 cut(s)	805, 1356, 1561
Van91I	CCANNNNNTGG	1 cut(s)	1700
VneI	GTGCAC	1 cut(s)	702
VpaK11BI	GGWCC	5 cut(s)	157, 292, 491, 913, 1768
XapI	RAATTY	3 cut(s)	235, 435, 687
XceI	RCATGY	3 cut(s)	617, 1135, 1304
XcmI	CCANNNNNNNNNTGG	1 cut(s)	418
XmaI	CCCGGG	1 cut(s)	315
XmiI	GTMKAC	1 cut(s)	132
XmnI	GAANNNNTTC	1 cut(s)	978
XspI	CTAG	3 cut(s)	65, 186, 218
Zsp2I	ATGCAT	2 cut(s)	396, 1369

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.