Ring finger
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 |
| malus_domestica | MD03G1079900.v1.1 MD11G1084500.v1.1 |
| prunus_persica | Prupe.6G064800_v2.0.a1 |
| pyrus_communis | pycom03g06380 pycom03g06390 pycom11g07290 pycom11g07300 |
| rosa_chinensis | RchiOBHm_Chr5g0067361 RchiOBHm_Chr5g0067371 |
| rosa_laevigata | RLG00000035930 |
| rosa_multiflora | Rmu_co8464233.1_g000001 Rmu_ssc0000354.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00013020 Rroxscaffold_1G00013710 |
| rosa_rugosa | Rorug05G0384400 Rorug05G0384500 Rorug05G0384600 Rorug05G0384600 Rorug05G0384600 Rorug05G0384600 |
| rosa_samantha | Rh5AG444000 Rh5BG461100 Rh5CG483400 Rh5DG476000 |
| rosa_wichuraiana | Rw5G041470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 2587 |
| Acc65I | GGTACC | 1 cut(s) | 651 |
| AccB1I | GGYRCC | 4 cut(s) | 651, 2547, 2770, 3437 |
| AccB7I | CCANNNNNTGG | 6 cut(s) | 785, 1820, 2660, 2759, 3269, 3541 |
| AccBSI | CCGCTC | 1 cut(s) | 282 |
| AccI | GTMKAC | 1 cut(s) | 1590 |
| AccIII | TCCGGA | 1 cut(s) | 2944 |
| AciI | CCGC | 9 cut(s) | 282, 626, 869, 893, 1163, 1457, 1979, 2394, 2806 |
| AclWI | GGATC | 7 cut(s) | 581, 589, 2156, 2969, 3050, 3137, 3328 |
| AcoI | YGGCCR | 2 cut(s) | 627, 949 |
| AcsI | RAATTY | 8 cut(s) | 906, 933, 1131, 1239, 1582, 2027, 3068, 3345 |
| AcuI | CTGAAG | 3 cut(s) | 453, 2403, 2805 |
| AcvI | CACGTG | 1 cut(s) | 397 |
| AcyI | GRCGYC | 1 cut(s) | 3208 |
| AflIII | ACRYGT | 3 cut(s) | 416, 1099, 2584 |
| AgeI | ACCGGT | 1 cut(s) | 366 |
| AhlI | ACTAGT | 1 cut(s) | 256 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 924, 956, 1861, 1893 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2915, 2947 |
| Alw21I | GWGCWC | 6 cut(s) | 155, 317, 460, 2247, 2287, 2521 |
| Alw26I | GTCTC | 6 cut(s) | 42, 1746, 1767, 1948, 3303, 3539 |
| Alw44I | GTGCAC | 3 cut(s) | 313, 2283, 2517 |
| AlwI | GGATC | 7 cut(s) | 581, 589, 2156, 2969, 3050, 3137, 3328 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 476, 494, 3146 |
| Ama87I | CYCGRG | 2 cut(s) | 1951, 2641 |
| Aor13HI | TCCGGA | 1 cut(s) | 2944 |
| ApaLI | GTGCAC | 3 cut(s) | 313, 2283, 2517 |
| ApoI | RAATTY | 8 cut(s) | 906, 933, 1131, 1239, 1582, 2027, 3068, 3345 |
| AsiGI | ACCGGT | 1 cut(s) | 366 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1427, 2963 |
| Asp718I | GGTACC | 1 cut(s) | 651 |
| AspA2I | CCTAGG | 1 cut(s) | 3032 |
| AspLEI | GCGC | 2 cut(s) | 442, 1599 |
| AsuC2I | CCSGG | 5 cut(s) | 548, 1515, 2154, 2642, 2643 |
| AsuHPI | GGTGA | 9 cut(s) | 1235, 1328, 1334, 1503, 1873, 2102, 2279, 3409, 3535 |
| AvaI | CYCGRG | 2 cut(s) | 1951, 2641 |
| AvrII | CCTAGG | 1 cut(s) | 3032 |
| AxyI | CCTNAGG | 2 cut(s) | 1278, 2571 |
| BaeGI | GKGCMC | 5 cut(s) | 317, 2287, 2521, 2550, 3440 |
| BalI | TGGCCA | 1 cut(s) | 951 |
| BanI | GGYRCC | 4 cut(s) | 651, 2547, 2770, 3437 |
| BanII | GRGCYC | 1 cut(s) | 3117 |
| BauI | CACGAG | 1 cut(s) | 3355 |
| BbrPI | CACGTG | 1 cut(s) | 397 |
| BbsI | GAAGAC | 2 cut(s) | 1807, 3018 |
| Bbv12I | GWGCWC | 6 cut(s) | 155, 317, 460, 2247, 2287, 2521 |
| BbvCI | CCTCAGC | 5 cut(s) | 825, 1206, 1632, 1833, 2277 |
| BceAI | ACGGC | 2 cut(s) | 193, 614 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 84, 118 |
| BciVI | GTATCC | 2 cut(s) | 2107, 2864 |
| BclI | TGATCA | 3 cut(s) | 499, 643, 2824 |
| BcnI | CCSGG | 5 cut(s) | 548, 1515, 2154, 2642, 2643 |
| BcoDI | GTCTC | 6 cut(s) | 42, 1746, 1767, 1948, 3303, 3539 |
| BcuI | ACTAGT | 1 cut(s) | 256 |
| BfaI | CTAG | 5 cut(s) | 257, 2085, 2142, 2352, 3033 |
| BfmI | CTRYAG | 5 cut(s) | 98, 354, 896, 1001, 2363 |
| BfoI | RGCGCY | 1 cut(s) | 1600 |
| BfuAI | ACCTGC | 1 cut(s) | 2587 |
| BfuI | GTATCC | 2 cut(s) | 2107, 2864 |
| BlnI | CCTAGG | 1 cut(s) | 3032 |
| BlpI | GCTNAGC | 2 cut(s) | 774, 1569 |
| BmcAI | AGTACT | 2 cut(s) | 53, 680 |
| BmeT110I | CYCGRG | 2 cut(s) | 1951, 2641 |
| BmrI | ACTGGG | 3 cut(s) | 1925, 2963, 3233 |
| BmsI | GCATC | 8 cut(s) | 190, 275, 397, 1297, 1617, 1800, 2011, 2715 |
| BmuI | ACTGGG | 3 cut(s) | 1925, 2963, 3233 |
| BpiI | GAAGAC | 2 cut(s) | 1807, 3018 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1687, 1719 |
| BpmI | CTGGAG | 3 cut(s) | 1962, 2871, 3174 |
| Bpu10I | CCTNAGC | 5 cut(s) | 825, 1206, 1632, 1833, 2277 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 774, 1569 |
| BpuMI | CCSGG | 5 cut(s) | 548, 1515, 2154, 2642, 2643 |
| Bsa29I | ATCGAT | 1 cut(s) | 3319 |
| BsaAI | YACGTR | 2 cut(s) | 397, 1369 |
| BsaBI | GATNNNNATC | 2 cut(s) | 591, 3054 |
| BsaHI | GRCGYC | 1 cut(s) | 3208 |
| BsaI | GGTCTC | 1 cut(s) | 1948 |
| BsaWI | WCCGGW | 3 cut(s) | 61, 366, 2944 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 850, 874, 880, 904, 2181, 2211 |
| Bse118I | RCCGGY | 1 cut(s) | 366 |
| Bse1I | ACTGG | 6 cut(s) | 34, 1349, 1553, 1931, 2969, 3239 |
| Bse21I | CCTNAGG | 2 cut(s) | 1278, 2571 |
| Bse3DI | GCAATG | 3 cut(s) | 113, 262, 1752 |
| Bse8I | GATNNNNATC | 2 cut(s) | 591, 3054 |
| BseAI | TCCGGA | 1 cut(s) | 2944 |
| BseCI | ATCGAT | 1 cut(s) | 3319 |
| BseJI | GATNNNNATC | 2 cut(s) | 591, 3054 |
| BseMI | GCAATG | 3 cut(s) | 113, 262, 1752 |
| BseNI | ACTGG | 6 cut(s) | 34, 1349, 1553, 1931, 2969, 3239 |
| BseRI | GAGGAG | 1 cut(s) | 2890 |
| BseSI | GKGCMC | 5 cut(s) | 317, 2287, 2521, 2550, 3440 |
| BseX3I | CGGCCG | 1 cut(s) | 627 |
| BseYI | CCCAGC | 1 cut(s) | 1033 |
| BsgI | GTGCAG | 6 cut(s) | 419, 449, 558, 1043, 1524, 2565 |
| Bsh1285I | CGRYCG | 1 cut(s) | 630 |
| BshNI | GGYRCC | 4 cut(s) | 651, 2547, 2770, 3437 |
| BshTI | ACCGGT | 1 cut(s) | 366 |
| BshVI | ATCGAT | 1 cut(s) | 3319 |
| BsiEI | CGRYCG | 1 cut(s) | 630 |
| BsiHKAI | GWGCWC | 6 cut(s) | 155, 317, 460, 2247, 2287, 2521 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1951, 2641 |
| BsiSI | CCGG | 8 cut(s) | 45, 62, 367, 548, 1515, 2153, 2642, 2945 |
| BslFI | GGGAC | 6 cut(s) | 312, 802, 1674, 2589, 2619, 3117 |
| BsmAI | GTCTC | 6 cut(s) | 42, 1746, 1767, 1948, 3303, 3539 |
| BsmFI | GGGAC | 6 cut(s) | 312, 802, 1674, 2589, 2619, 3117 |
| BsmI | GAATGC | 4 cut(s) | 1267, 1770, 2353, 2358 |
| Bso31I | GGTCTC | 1 cut(s) | 1948 |
| BsoBI | CYCGRG | 2 cut(s) | 1951, 2641 |
| Bsp1286I | GDGCHC | 9 cut(s) | 155, 317, 460, 2247, 2287, 2521, 2550, 3117, 3440 |
| Bsp13I | TCCGGA | 1 cut(s) | 2944 |
| Bsp1407I | TGTACA | 2 cut(s) | 1660, 2377 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 774, 1569 |
| Bsp19I | CCATGG | 1 cut(s) | 2553 |
| BspACI | CCGC | 9 cut(s) | 282, 626, 869, 893, 1163, 1457, 1979, 2394, 2806 |
| BspDI | ATCGAT | 1 cut(s) | 3319 |
| BspEI | TCCGGA | 1 cut(s) | 2944 |
| BspHI | TCATGA | 1 cut(s) | 2317 |
| BspMAI | CTGCAG | 2 cut(s) | 1005, 2367 |
| BspMI | ACCTGC | 1 cut(s) | 2587 |
| BspPI | GGATC | 7 cut(s) | 581, 589, 2156, 2969, 3050, 3137, 3328 |
| BspT107I | GGYRCC | 4 cut(s) | 651, 2547, 2770, 3437 |
| BspTNI | GGTCTC | 1 cut(s) | 1948 |
| BsrBI | CCGCTC | 1 cut(s) | 282 |
| BsrDI | GCAATG | 3 cut(s) | 113, 262, 1752 |
| BsrFI | RCCGGY | 1 cut(s) | 366 |
| BsrGI | TGTACA | 2 cut(s) | 1660, 2377 |
| BsrI | ACTGG | 6 cut(s) | 34, 1349, 1553, 1931, 2969, 3239 |
| BssAI | RCCGGY | 1 cut(s) | 366 |
| BssNI | GRCGYC | 1 cut(s) | 3208 |
| BssSI | CACGAG | 1 cut(s) | 3355 |
| BssT1I | CCWWGG | 2 cut(s) | 2553, 3032 |
| Bst2BI | CACGAG | 1 cut(s) | 3355 |
| Bst4CI | ACNGT | 8 cut(s) | 102, 678, 1021, 1683, 1740, 2258, 2431, 3185 |
| Bst6I | CTCTTC | 2 cut(s) | 2214, 3301 |
| BstACI | GRCGYC | 1 cut(s) | 3208 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 455, 494, 2021 |
| BstAUI | TGTACA | 2 cut(s) | 1660, 2377 |
| BstBAI | YACGTR | 2 cut(s) | 397, 1369 |
| BstDSI | CCRYGG | 2 cut(s) | 2553, 3535 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2662, 2742 |
| BstH2I | RGCGCY | 1 cut(s) | 1600 |
| BstHHI | GCGC | 2 cut(s) | 442, 1599 |
| BstMAI | GTCTC | 6 cut(s) | 42, 1746, 1767, 1948, 3303, 3539 |
| BstMCI | CGRYCG | 1 cut(s) | 630 |
| BstNSI | RCATGY | 5 cut(s) | 410, 420, 1103, 2177, 2588 |
| BstSFI | CTRYAG | 5 cut(s) | 98, 354, 896, 1001, 2363 |
| BstSLI | GKGCMC | 5 cut(s) | 317, 2287, 2521, 2550, 3440 |
| BstV2I | GAAGAC | 2 cut(s) | 1807, 3018 |
| BstX2I | RGATCY | 4 cut(s) | 581, 2161, 2974, 3142 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2513 |
| BstYI | RGATCY | 4 cut(s) | 581, 2161, 2974, 3142 |
| BstZI | CGGCCG | 1 cut(s) | 627 |
| Bsu15I | ATCGAT | 1 cut(s) | 3319 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1278, 2571 |
| BsuI | GTATCC | 2 cut(s) | 2107, 2864 |
| BsuTUI | ATCGAT | 1 cut(s) | 3319 |
| BtgI | CCRYGG | 2 cut(s) | 2553, 3535 |
| BtsI | GCAGTG | 1 cut(s) | 570 |
| BtsIMutI | CAGTG | 4 cut(s) | 570, 1026, 1356, 1938 |
| BveI | ACCTGC | 1 cut(s) | 2587 |
| CaiI | CAGNNNCTG | 3 cut(s) | 476, 494, 3146 |
| CciI | TCATGA | 1 cut(s) | 2317 |
| CfoI | GCGC | 2 cut(s) | 442, 1599 |
| Cfr10I | RCCGGY | 1 cut(s) | 366 |
| Cfr9I | CCCGGG | 1 cut(s) | 2641 |
| ClaI | ATCGAT | 1 cut(s) | 3319 |
| CseI | GACGC | 2 cut(s) | 1442, 3216 |
| CsiI | ACCWGGT | 1 cut(s) | 2629 |
| CspAI | ACCGGT | 1 cut(s) | 366 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 352, 387 |
| DraI | TTTAAA | 1 cut(s) | 2032 |
| EaeI | YGGCCR | 2 cut(s) | 627, 949 |
| EagI | CGGCCG | 1 cut(s) | 627 |
| Eam1104I | CTCTTC | 2 cut(s) | 2214, 3301 |
| EarI | CTCTTC | 2 cut(s) | 2214, 3301 |
| EciI | GGCGGA | 2 cut(s) | 858, 1446 |
| EclXI | CGGCCG | 1 cut(s) | 627 |
| Eco130I | CCWWGG | 2 cut(s) | 2553, 3032 |
| Eco147I | AGGCCT | 3 cut(s) | 2512, 2892, 3037 |
| Eco24I | GRGCYC | 1 cut(s) | 3117 |
| Eco31I | GGTCTC | 1 cut(s) | 1948 |
| Eco52I | CGGCCG | 1 cut(s) | 627 |
| Eco57I | CTGAAG | 3 cut(s) | 453, 2403, 2805 |
| Eco72I | CACGTG | 1 cut(s) | 397 |
| Eco81I | CCTNAGG | 2 cut(s) | 1278, 2571 |
| Eco88I | CYCGRG | 2 cut(s) | 1951, 2641 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2662, 2742 |
| EcoO109I | RGGNCCY | 9 cut(s) | 229, 544, 2540, 2576, 2747, 3090, 3104, 3409, 3472 |
| EcoT14I | CCWWGG | 2 cut(s) | 2553, 3032 |
| EcoT38I | GRGCYC | 1 cut(s) | 3117 |
| ErhI | CCWWGG | 2 cut(s) | 2553, 3032 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2298, 2330 |
| FaqI | GGGAC | 6 cut(s) | 312, 802, 1674, 2589, 2619, 3117 |
| FauI | CCCGC | 1 cut(s) | 2387 |
| FauNDI | CATATG | 5 cut(s) | 172, 784, 1657, 2776, 3213 |
| FbaI | TGATCA | 3 cut(s) | 499, 643, 2824 |
| FblI | GTMKAC | 1 cut(s) | 1590 |
| FriOI | GRGCYC | 1 cut(s) | 3117 |
| FspBI | CTAG | 5 cut(s) | 257, 2085, 2142, 2352, 3033 |
| GlaI | GCGC | 2 cut(s) | 441, 1598 |
| GsaI | CCCAGC | 1 cut(s) | 1037 |
| GsuI | CTGGAG | 3 cut(s) | 1962, 2871, 3174 |
| HaeII | RGCGCY | 1 cut(s) | 1600 |
| HapII | CCGG | 8 cut(s) | 45, 62, 367, 548, 1515, 2153, 2642, 2945 |
| HgaI | GACGC | 2 cut(s) | 1442, 3216 |
| HhaI | GCGC | 2 cut(s) | 442, 1599 |
| Hin1I | GRCGYC | 1 cut(s) | 3208 |
| Hin6I | GCGC | 2 cut(s) | 440, 1597 |
| HinP1I | GCGC | 2 cut(s) | 440, 1597 |
| HpaII | CCGG | 8 cut(s) | 45, 62, 367, 548, 1515, 2153, 2642, 2945 |
| HphI | GGTGA | 9 cut(s) | 1235, 1328, 1334, 1503, 1873, 2102, 2279, 3409, 3535 |
| Hpy166II | GTNNAC | 8 cut(s) | 82, 315, 1591, 1885, 2285, 2519, 2693, 3535 |
| Hpy8I | GTNNAC | 8 cut(s) | 82, 315, 1591, 1885, 2285, 2519, 2693, 3535 |
| Hpy99I | CGWCG | 3 cut(s) | 3210, 3395, 3533 |
| HpyCH4III | ACNGT | 8 cut(s) | 102, 678, 1021, 1683, 1740, 2258, 2431, 3185 |
| HpyCH4IV | ACGT | 4 cut(s) | 144, 396, 1368, 1687 |
| HpySE526I | ACGT | 4 cut(s) | 144, 396, 1368, 1687 |
| Hsp92I | GRCGYC | 1 cut(s) | 3208 |
| HspAI | GCGC | 2 cut(s) | 440, 1597 |
| Kpn2I | TCCGGA | 1 cut(s) | 2944 |
| KpnI | GGTACC | 1 cut(s) | 655 |
| Ksp22I | TGATCA | 3 cut(s) | 499, 643, 2824 |
| LmnI | GCTCC | 8 cut(s) | 279, 961, 1075, 1943, 2242, 2831, 3172, 3232 |
| LweI | GCATC | 8 cut(s) | 190, 275, 397, 1297, 1617, 1800, 2011, 2715 |
| MabI | ACCWGGT | 1 cut(s) | 2629 |
| MaeI | CTAG | 5 cut(s) | 257, 2085, 2142, 2352, 3033 |
| MaeII | ACGT | 4 cut(s) | 144, 396, 1368, 1687 |
| MaeIII | GTNAC | 7 cut(s) | 187, 392, 1080, 1197, 1683, 2252, 2798 |
| MbiI | CCGCTC | 1 cut(s) | 282 |
| MfeI | CAATTG | 2 cut(s) | 516, 2835 |
| MflI | RGATCY | 4 cut(s) | 581, 2161, 2974, 3142 |
| MhlI | GDGCHC | 9 cut(s) | 155, 317, 460, 2247, 2287, 2521, 2550, 3117, 3440 |
| MlsI | TGGCCA | 1 cut(s) | 951 |
| MluNI | TGGCCA | 1 cut(s) | 951 |
| MlyI | GAGTC | 6 cut(s) | 227, 384, 1399, 2003, 2147, 2891 |
| MmeI | TCCRAC | 5 cut(s) | 1777, 2450, 2722, 3002, 3181 |
| Mox20I | TGGCCA | 1 cut(s) | 951 |
| MroI | TCCGGA | 1 cut(s) | 2944 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1427, 2963 |
| MscI | TGGCCA | 1 cut(s) | 951 |
| MseI | TTAA | 3 cut(s) | 2031, 2097, 2564 |
| MslI | CAYNNNNRTG | 3 cut(s) | 415, 1725, 3216 |
| Msp20I | TGGCCA | 1 cut(s) | 951 |
| MspA1I | CMGCKG | 1 cut(s) | 2806 |
| MspI | CCGG | 8 cut(s) | 45, 62, 367, 548, 1515, 2153, 2642, 2945 |
| MunI | CAATTG | 2 cut(s) | 516, 2835 |
| Mva1269I | GAATGC | 4 cut(s) | 1267, 1770, 2353, 2358 |
| NciI | CCSGG | 5 cut(s) | 548, 1515, 2154, 2642, 2643 |
| NcoI | CCATGG | 1 cut(s) | 2553 |
| NdeI | CATATG | 5 cut(s) | 172, 784, 1657, 2776, 3213 |
| NmuCI | GTSAC | 4 cut(s) | 187, 392, 1080, 1197 |
| NspI | RCATGY | 5 cut(s) | 410, 420, 1103, 2177, 2588 |
| PaeR7I | CTCGAG | 1 cut(s) | 1951 |
| PagI | TCATGA | 1 cut(s) | 2317 |
| PasI | CCCWGGG | 1 cut(s) | 695 |
| PceI | AGGCCT | 3 cut(s) | 2512, 2892, 3037 |
| PciI | ACATGT | 3 cut(s) | 416, 1099, 2584 |
| PctI | GAATGC | 4 cut(s) | 1267, 1770, 2353, 2358 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1427, 2963 |
| PfeI | GAWTC | 7 cut(s) | 799, 1423, 1988, 2131, 2192, 2959, 3050 |
| PflMI | CCANNNNNTGG | 6 cut(s) | 785, 1820, 2660, 2759, 3269, 3541 |
| PinAI | ACCGGT | 1 cut(s) | 366 |
| PleI | GAGTC | 6 cut(s) | 226, 383, 1399, 2002, 2146, 2891 |
| PmaCI | CACGTG | 1 cut(s) | 397 |
| PmlI | CACGTG | 1 cut(s) | 397 |
| PpsI | GAGTC | 6 cut(s) | 226, 383, 1399, 2002, 2146, 2891 |
| Ppu21I | YACGTR | 2 cut(s) | 397, 1369 |
| PpuMI | RGGWCCY | 4 cut(s) | 2576, 3104, 3409, 3472 |
| PscI | ACATGT | 3 cut(s) | 416, 1099, 2584 |
| Psp5II | RGGWCCY | 4 cut(s) | 2576, 3104, 3409, 3472 |
| PspCI | CACGTG | 1 cut(s) | 397 |
| PspFI | CCCAGC | 1 cut(s) | 1033 |
| PspPPI | RGGWCCY | 4 cut(s) | 2576, 3104, 3409, 3472 |
| PstI | CTGCAG | 2 cut(s) | 1005, 2367 |
| PstNI | CAGNNNCTG | 3 cut(s) | 476, 494, 3146 |
| PsuI | RGATCY | 4 cut(s) | 581, 2161, 2974, 3142 |
| RseI | CAYNNNNRTG | 3 cut(s) | 415, 1725, 3216 |
| SaqAI | TTAA | 3 cut(s) | 2031, 2097, 2564 |
| ScaI | AGTACT | 2 cut(s) | 53, 680 |
| SchI | GAGTC | 6 cut(s) | 227, 384, 1399, 2003, 2147, 2891 |
| SduI | GDGCHC | 9 cut(s) | 155, 317, 460, 2247, 2287, 2521, 2550, 3117, 3440 |
| SexAI | ACCWGGT | 1 cut(s) | 2629 |
| SfaNI | GCATC | 8 cut(s) | 190, 275, 397, 1297, 1617, 1800, 2011, 2715 |
| SfcI | CTRYAG | 5 cut(s) | 98, 354, 896, 1001, 2363 |
| Sfr274I | CTCGAG | 1 cut(s) | 1951 |
| SlaI | CTCGAG | 1 cut(s) | 1951 |
| SmaI | CCCGGG | 1 cut(s) | 2643 |
| SmiI | ATTTAAAT | 1 cut(s) | 2032 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 415, 1725, 3216 |
| SpeI | ACTAGT | 1 cut(s) | 256 |
| SseBI | AGGCCT | 3 cut(s) | 2512, 2892, 3037 |
| SsiI | CCGC | 9 cut(s) | 282, 626, 869, 893, 1163, 1457, 1979, 2394, 2806 |
| SspMI | CTAG | 5 cut(s) | 257, 2085, 2142, 2352, 3033 |
| StuI | AGGCCT | 3 cut(s) | 2512, 2892, 3037 |
| StyI | CCWWGG | 2 cut(s) | 2553, 3032 |
| SwaI | ATTTAAAT | 1 cut(s) | 2032 |
| TaaI | ACNGT | 8 cut(s) | 102, 678, 1021, 1683, 1740, 2258, 2431, 3185 |
| TaiI | ACGT | 4 cut(s) | 147, 399, 1371, 1690 |
| TaqI | TCGA | 5 cut(s) | 1952, 2332, 2895, 3319, 3390 |
| TatI | WGTACW | 9 cut(s) | 51, 110, 678, 1660, 1825, 2377, 2383, 2437, 2692 |
| TauI | GCSGC | 2 cut(s) | 629, 2809 |
| TfiI | GAWTC | 7 cut(s) | 799, 1423, 1988, 2131, 2192, 2959, 3050 |
| Tru1I | TTAA | 3 cut(s) | 2031, 2097, 2564 |
| Tru9I | TTAA | 3 cut(s) | 2031, 2097, 2564 |
| TscAI | CASTG | 4 cut(s) | 577, 1026, 1356, 1938 |
| TseFI | GTSAC | 4 cut(s) | 187, 392, 1080, 1197 |
| Tsp45I | GTSAC | 4 cut(s) | 187, 392, 1080, 1197 |
| TspGWI | ACGGA | 5 cut(s) | 230, 1104, 1698, 2053, 3552 |
| TspMI | CCCGGG | 1 cut(s) | 2641 |
| TspRI | CASTG | 4 cut(s) | 577, 1026, 1356, 1938 |
| Van91I | CCANNNNNTGG | 6 cut(s) | 785, 1820, 2660, 2759, 3269, 3541 |
| VneI | GTGCAC | 3 cut(s) | 313, 2283, 2517 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2662, 2742 |
| XapI | RAATTY | 8 cut(s) | 906, 933, 1131, 1239, 1582, 2027, 3068, 3345 |
| XceI | RCATGY | 5 cut(s) | 410, 420, 1103, 2177, 2588 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 692 |
| XhoI | CTCGAG | 1 cut(s) | 1951 |
| XmaI | CCCGGG | 1 cut(s) | 2641 |
| XmaJI | CCTAGG | 1 cut(s) | 3032 |
| XmiI | GTMKAC | 1 cut(s) | 1590 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1427, 2963 |
| XspI | CTAG | 5 cut(s) | 257, 2085, 2142, 2352, 3033 |
| ZrmI | AGTACT | 2 cut(s) | 53, 680 |