Ring finger
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 FvH4_3g37470 |
| malus_domestica | MD03G1079900.v1.1 MD11G1084500.v1.1 |
| prunus_persica | Prupe.6G064800_v2.0.a1 |
| pyrus_communis | pycom03g06380 pycom03g06390 pycom11g07290 pycom11g07300 |
| rosa_chinensis | RchiOBHm_Chr5g0067361 RchiOBHm_Chr5g0067371 |
| rosa_laevigata | RLG00000035930 |
| rosa_multiflora | Rmu_co8464233.1_g000001 Rmu_ssc0000354.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00013020 Rroxscaffold_1G00013710 |
| rosa_rugosa | Rorug05G0384400 Rorug05G0384500 Rorug05G0384600 Rorug05G0384600 Rorug05G0384600 Rorug05G0384600 |
| rosa_samantha | Rh5AG444000 Rh5BG461100 Rh5CG483400 Rh5DG476000 |
| rosa_wichuraiana | Rw5G041470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1135 |
| AatII | GACGTC | 1 cut(s) | 389 |
| Acc16I | TGCGCA | 1 cut(s) | 792 |
| Acc36I | ACCTGC | 2 cut(s) | 672, 1135 |
| AccB1I | GGYRCC | 1 cut(s) | 847 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 29, 632, 1580 |
| AccBSI | CCGCTC | 1 cut(s) | 676 |
| AciI | CCGC | 2 cut(s) | 653, 674 |
| AclI | AACGTT | 1 cut(s) | 1293 |
| AclWI | GGATC | 1 cut(s) | 536 |
| AcsI | RAATTY | 4 cut(s) | 199, 442, 861, 1344 |
| AcuI | CTGAAG | 2 cut(s) | 306, 818 |
| AcyI | GRCGYC | 1 cut(s) | 386 |
| AfaI | GTAC | 4 cut(s) | 518, 569, 1138, 1587 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 29, 632, 1580 |
| AgsI | TTSAA | 5 cut(s) | 71, 467, 830, 986, 1244 |
| AjnI | CCWGG | 5 cut(s) | 274, 357, 427, 532, 1449 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 741, 773 |
| AleI | CACNNNNGTG | 1 cut(s) | 132 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1335, 1367 |
| Alw21I | GWGCWC | 4 cut(s) | 8, 87, 143, 1116 |
| Alw26I | GTCTC | 4 cut(s) | 393, 1014, 1503, 1524 |
| Alw44I | GTGCAC | 1 cut(s) | 139 |
| AlwI | GGATC | 1 cut(s) | 536 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 329 |
| AoxI | GGCC | 3 cut(s) | 152, 1453, 1562 |
| ApaLI | GTGCAC | 1 cut(s) | 139 |
| ApoI | RAATTY | 4 cut(s) | 199, 442, 861, 1344 |
| AspLEI | GCGC | 2 cut(s) | 793, 1362 |
| AspS9I | GGNCC | 2 cut(s) | 152, 1453 |
| AsuHPI | GGTGA | 3 cut(s) | 995, 1088, 1278 |
| AsuII | TTCGAA | 1 cut(s) | 440 |
| BaeGI | GKGCMC | 2 cut(s) | 143, 1167 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 542, 575, 1622, 1655 |
| BanI | GGYRCC | 1 cut(s) | 847 |
| Bbv12I | GWGCWC | 4 cut(s) | 8, 87, 143, 1116 |
| BbvCI | CCTCAGC | 3 cut(s) | 1212, 1395, 1593 |
| BccI | CCATC | 5 cut(s) | 23, 733, 889, 1060, 1662 |
| BceAI | ACGGC | 1 cut(s) | 1577 |
| BciT130I | CCWGG | 5 cut(s) | 276, 359, 429, 534, 1451 |
| BciVI | GTATCC | 2 cut(s) | 540, 1650 |
| BcoDI | GTCTC | 4 cut(s) | 393, 1014, 1503, 1524 |
| BfmI | CTRYAG | 2 cut(s) | 207, 1026 |
| BfoI | RGCGCY | 1 cut(s) | 1363 |
| BfuAI | ACCTGC | 2 cut(s) | 672, 1135 |
| BfuI | GTATCC | 2 cut(s) | 540, 1650 |
| BmcAI | AGTACT | 3 cut(s) | 518, 569, 1587 |
| Bme1390I | CCNGG | 5 cut(s) | 276, 359, 429, 534, 1451 |
| BmgT120I | GGNCC | 2 cut(s) | 152, 1453 |
| BmiI | GGNNCC | 4 cut(s) | 153, 402, 780, 849 |
| BmrFI | CCNGG | 5 cut(s) | 276, 359, 429, 534, 1451 |
| BmsI | GCATC | 3 cut(s) | 43, 250, 1560 |
| BoxI | GACNNNNGTC | 1 cut(s) | 812 |
| BpmI | CTGGAG | 3 cut(s) | 450, 1299, 1340 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1212, 1395, 1593 |
| Bpu14I | TTCGAA | 1 cut(s) | 440 |
| BpuEI | CTTGAG | 4 cut(s) | 438, 720, 897, 1140 |
| BsaHI | GRCGYC | 1 cut(s) | 386 |
| BsaJI | CCNNGG | 3 cut(s) | 274, 1449, 1450 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 385, 415, 660, 690 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 29, 632, 1580 |
| Bse1I | ACTGG | 7 cut(s) | 490, 1033, 1075, 1109, 1316, 1376, 1495 |
| Bse3DI | GCAATG | 2 cut(s) | 115, 1374 |
| BseBI | CCWGG | 5 cut(s) | 276, 359, 429, 534, 1451 |
| BseDI | CCNNGG | 3 cut(s) | 274, 1449, 1450 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 29, 632, 1580 |
| BseMI | GCAATG | 2 cut(s) | 115, 1374 |
| BseNI | ACTGG | 7 cut(s) | 490, 1033, 1075, 1109, 1316, 1376, 1495 |
| BseRI | GAGGAG | 2 cut(s) | 900, 1632 |
| BseSI | GKGCMC | 2 cut(s) | 143, 1167 |
| BseYI | CCCAGC | 1 cut(s) | 978 |
| BsgI | GTGCAG | 3 cut(s) | 272, 302, 1287 |
| BshFI | GGCC | 3 cut(s) | 154, 1455, 1564 |
| BshNI | GGYRCC | 1 cut(s) | 847 |
| BsiHKAI | GWGCWC | 4 cut(s) | 8, 87, 143, 1116 |
| BslFI | GGGAC | 5 cut(s) | 649, 961, 1021, 1431, 1572 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 29, 632, 1580 |
| BsmAI | GTCTC | 4 cut(s) | 393, 1014, 1503, 1524 |
| BsmBI | CGTCTC | 2 cut(s) | 393, 1014 |
| BsmFI | GGGAC | 5 cut(s) | 649, 961, 1021, 1431, 1572 |
| BsmI | GAATGC | 1 cut(s) | 1027 |
| BsnI | GGCC | 3 cut(s) | 154, 1455, 1564 |
| Bsp119I | TTCGAA | 1 cut(s) | 440 |
| Bsp1286I | GDGCHC | 5 cut(s) | 8, 87, 143, 1116, 1167 |
| Bsp143I | GATC | 1 cut(s) | 541 |
| BspACI | CCGC | 2 cut(s) | 653, 674 |
| BspANI | GGCC | 3 cut(s) | 154, 1455, 1564 |
| BspLI | GGNNCC | 4 cut(s) | 153, 402, 780, 849 |
| BspMI | ACCTGC | 2 cut(s) | 672, 1135 |
| BspPI | GGATC | 1 cut(s) | 536 |
| BspT104I | TTCGAA | 1 cut(s) | 440 |
| BspT107I | GGYRCC | 1 cut(s) | 847 |
| BsrBI | CCGCTC | 1 cut(s) | 676 |
| BsrDI | GCAATG | 2 cut(s) | 115, 1374 |
| BsrI | ACTGG | 7 cut(s) | 490, 1033, 1075, 1109, 1316, 1376, 1495 |
| BssECI | CCNNGG | 3 cut(s) | 274, 1449, 1450 |
| BssMI | GATC | 1 cut(s) | 541 |
| BssNI | GRCGYC | 1 cut(s) | 386 |
| Bst2UI | CCWGG | 5 cut(s) | 276, 359, 429, 534, 1451 |
| Bst4CI | ACNGT | 8 cut(s) | 376, 382, 558, 640, 873, 975, 1030, 1612 |
| BstACI | GRCGYC | 1 cut(s) | 386 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 613 |
| BstBI | TTCGAA | 1 cut(s) | 440 |
| BstC8I | GCNNGC | 9 cut(s) | 87, 300, 588, 618, 657, 777, 840, 897, 1529 |
| BstH2I | RGCGCY | 1 cut(s) | 1363 |
| BstHHI | GCGC | 2 cut(s) | 793, 1362 |
| BstKTI | GATC | 1 cut(s) | 544 |
| BstMAI | GTCTC | 4 cut(s) | 393, 1014, 1503, 1524 |
| BstMBI | GATC | 1 cut(s) | 541 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 299, 344, 482, 613, 652, 673, 785, 1570 |
| BstNI | CCWGG | 5 cut(s) | 276, 359, 429, 534, 1451 |
| BstNSI | RCATGY | 1 cut(s) | 1531 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 812 |
| BstSCI | CCNGG | 5 cut(s) | 274, 357, 427, 532, 1449 |
| BstSFI | CTRYAG | 2 cut(s) | 207, 1026 |
| BstSLI | GKGCMC | 2 cut(s) | 143, 1167 |
| BsuI | GTATCC | 2 cut(s) | 540, 1650 |
| BsuRI | GGCC | 3 cut(s) | 154, 1455, 1564 |
| BtsIMutI | CAGTG | 3 cut(s) | 387, 497, 1116 |
| BveI | ACCTGC | 2 cut(s) | 672, 1135 |
| Cac8I | GCNNGC | 9 cut(s) | 87, 300, 588, 618, 657, 777, 840, 897, 1529 |
| CaiI | CAGNNNCTG | 1 cut(s) | 329 |
| CfoI | GCGC | 2 cut(s) | 793, 1362 |
| Cfr13I | GGNCC | 2 cut(s) | 152, 1453 |
| Csp6I | GTAC | 4 cut(s) | 517, 568, 1137, 1586 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 205, 240, 1536, 1571 |
| CviAII | CATG | 6 cut(s) | 144, 890, 1018, 1187, 1528, 1580 |
| CviQI | GTAC | 4 cut(s) | 517, 568, 1137, 1586 |
| DpnI | GATC | 1 cut(s) | 543 |
| DpnII | GATC | 1 cut(s) | 541 |
| Eco57I | CTGAAG | 2 cut(s) | 306, 818 |
| EcoO109I | RGGNCCY | 1 cut(s) | 152 |
| EcoRI | GAATTC | 2 cut(s) | 442, 1344 |
| EcoRII | CCWGG | 5 cut(s) | 274, 357, 427, 532, 1449 |
| Esp3I | CGTCTC | 2 cut(s) | 393, 1014 |
| FaeI | CATG | 6 cut(s) | 147, 893, 1021, 1190, 1531, 1583 |
| FaqI | GGGAC | 5 cut(s) | 649, 961, 1021, 1431, 1572 |
| FatI | CATG | 6 cut(s) | 143, 889, 1017, 1186, 1527, 1579 |
| FauNDI | CATATG | 1 cut(s) | 1600 |
| FspI | TGCGCA | 1 cut(s) | 792 |
| GlaI | GCGC | 2 cut(s) | 792, 1361 |
| GsaI | CCCAGC | 1 cut(s) | 982 |
| GsuI | CTGGAG | 3 cut(s) | 450, 1299, 1340 |
| HaeII | RGCGCY | 1 cut(s) | 1363 |
| HaeIII | GGCC | 3 cut(s) | 154, 1455, 1564 |
| HhaI | GCGC | 2 cut(s) | 793, 1362 |
| Hin1I | GRCGYC | 1 cut(s) | 386 |
| Hin1II | CATG | 6 cut(s) | 147, 893, 1021, 1190, 1531, 1583 |
| Hin6I | GCGC | 2 cut(s) | 791, 1360 |
| HinP1I | GCGC | 2 cut(s) | 791, 1360 |
| HinfI | GANTC | 6 cut(s) | 71, 228, 437, 991, 1195, 1201 |
| HphI | GGTGA | 3 cut(s) | 995, 1088, 1278 |
| Hpy166II | GTNNAC | 2 cut(s) | 141, 1321 |
| Hpy188I | TCNGA | 8 cut(s) | 163, 354, 372, 393, 480, 1194, 1200, 1671 |
| Hpy188III | TCNNGA | 2 cut(s) | 314, 1341 |
| Hpy8I | GTNNAC | 2 cut(s) | 141, 1321 |
| HpyAV | CCTTC | 2 cut(s) | 1109, 1293 |
| HpyCH4III | ACNGT | 8 cut(s) | 376, 382, 558, 640, 873, 975, 1030, 1612 |
| HpyCH4IV | ACGT | 4 cut(s) | 386, 1135, 1293, 1444 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 299, 344, 482, 613, 652, 673, 785, 1570 |
| HpySE526I | ACGT | 4 cut(s) | 386, 1135, 1293, 1444 |
| Hsp92I | GRCGYC | 1 cut(s) | 386 |
| Hsp92II | CATG | 6 cut(s) | 147, 893, 1021, 1190, 1531, 1583 |
| HspAI | GCGC | 2 cut(s) | 791, 1360 |
| Kzo9I | GATC | 1 cut(s) | 541 |
| LmnI | GCTCC | 6 cut(s) | 406, 431, 481, 681, 784, 1053 |
| LweI | GCATC | 3 cut(s) | 43, 250, 1560 |
| MaeII | ACGT | 4 cut(s) | 386, 1135, 1293, 1444 |
| MaeIII | GTNAC | 3 cut(s) | 40, 376, 382 |
| MalI | GATC | 1 cut(s) | 543 |
| MbiI | CCGCTC | 1 cut(s) | 676 |
| MboI | GATC | 1 cut(s) | 541 |
| MhlI | GDGCHC | 5 cut(s) | 8, 87, 143, 1116, 1167 |
| MluCI | AATT | 9 cut(s) | 199, 234, 442, 591, 768, 861, 1060, 1344, 1439 |
| MlyI | GAGTC | 1 cut(s) | 1189 |
| MmeI | TCCRAC | 2 cut(s) | 503, 1405 |
| MslI | CAYNNNNRTG | 2 cut(s) | 132, 1482 |
| MspA1I | CMGCKG | 1 cut(s) | 338 |
| MspR9I | CCNGG | 5 cut(s) | 276, 359, 429, 534, 1451 |
| Mva1269I | GAATGC | 1 cut(s) | 1027 |
| MvaI | CCWGG | 5 cut(s) | 276, 359, 429, 534, 1451 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 299, 344, 482, 613, 652, 673, 785, 1570 |
| NdeI | CATATG | 1 cut(s) | 1600 |
| NdeII | GATC | 1 cut(s) | 541 |
| NlaIII | CATG | 6 cut(s) | 147, 893, 1021, 1190, 1531, 1583 |
| NlaIV | GGNNCC | 4 cut(s) | 153, 402, 780, 849 |
| NmuCI | GTSAC | 2 cut(s) | 40, 382 |
| NsbI | TGCGCA | 1 cut(s) | 792 |
| NspI | RCATGY | 1 cut(s) | 1531 |
| NspV | TTCGAA | 1 cut(s) | 440 |
| OliI | CACNNNNGTG | 1 cut(s) | 132 |
| PaeI | GCATGC | 1 cut(s) | 1531 |
| PaqCI | CACCTGC | 1 cut(s) | 1135 |
| PasI | CCCWGGG | 1 cut(s) | 1450 |
| PctI | GAATGC | 1 cut(s) | 1027 |
| PfeI | GAWTC | 5 cut(s) | 71, 228, 437, 991, 1201 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 29, 632, 1580 |
| PfoI | TCCNGGA | 1 cut(s) | 532 |
| PleI | GAGTC | 1 cut(s) | 1189 |
| PpsI | GAGTC | 1 cut(s) | 1189 |
| PshAI | GACNNNNGTC | 1 cut(s) | 812 |
| Psp1406I | AACGTT | 1 cut(s) | 1293 |
| Psp6I | CCWGG | 5 cut(s) | 274, 357, 427, 532, 1449 |
| PspFI | CCCAGC | 1 cut(s) | 978 |
| PspGI | CCWGG | 5 cut(s) | 274, 357, 427, 532, 1449 |
| PspN4I | GGNNCC | 4 cut(s) | 153, 402, 780, 849 |
| PspPI | GGNCC | 2 cut(s) | 152, 1453 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1605, 1637 |
| PstNI | CAGNNNCTG | 1 cut(s) | 329 |
| PvuII | CAGCTG | 1 cut(s) | 338 |
| RsaI | GTAC | 4 cut(s) | 518, 569, 1138, 1587 |
| RsaNI | GTAC | 4 cut(s) | 517, 568, 1137, 1586 |
| RseI | CAYNNNNRTG | 2 cut(s) | 132, 1482 |
| Sau3AI | GATC | 1 cut(s) | 541 |
| Sau96I | GGNCC | 2 cut(s) | 152, 1453 |
| ScaI | AGTACT | 3 cut(s) | 518, 569, 1587 |
| SchI | GAGTC | 1 cut(s) | 1189 |
| ScrFI | CCNGG | 5 cut(s) | 276, 359, 429, 534, 1451 |
| SduI | GDGCHC | 5 cut(s) | 8, 87, 143, 1116, 1167 |
| SfaNI | GCATC | 3 cut(s) | 43, 250, 1560 |
| SfcI | CTRYAG | 2 cut(s) | 207, 1026 |
| SfuI | TTCGAA | 1 cut(s) | 440 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 132, 1482 |
| SmlI | CTYRAG | 4 cut(s) | 453, 735, 912, 1155 |
| SmoI | CTYRAG | 4 cut(s) | 453, 735, 912, 1155 |
| SphI | GCATGC | 1 cut(s) | 1531 |
| Sse9I | AATT | 9 cut(s) | 199, 234, 442, 591, 768, 861, 1060, 1344, 1439 |
| SsiI | CCGC | 2 cut(s) | 653, 674 |
| SspI | AATATT | 1 cut(s) | 1403 |
| StyD4I | CCNGG | 5 cut(s) | 274, 357, 427, 532, 1449 |
| TaaI | ACNGT | 8 cut(s) | 376, 382, 558, 640, 873, 975, 1030, 1612 |
| TaiI | ACGT | 4 cut(s) | 389, 1138, 1296, 1447 |
| TaqI | TCGA | 3 cut(s) | 440, 1067, 1490 |
| TasI | AATT | 9 cut(s) | 199, 234, 442, 591, 768, 861, 1060, 1344, 1439 |
| TatI | WGTACW | 3 cut(s) | 516, 567, 1585 |
| TfiI | GAWTC | 5 cut(s) | 71, 228, 437, 991, 1201 |
| TscAI | CASTG | 3 cut(s) | 387, 497, 1116 |
| TseFI | GTSAC | 2 cut(s) | 40, 382 |
| Tsp45I | GTSAC | 2 cut(s) | 40, 382 |
| TspDTI | ATGAA | 3 cut(s) | 104, 1034, 1053 |
| TspRI | CASTG | 3 cut(s) | 387, 497, 1116 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 29, 632, 1580 |
| VneI | GTGCAC | 1 cut(s) | 139 |
| XapI | RAATTY | 4 cut(s) | 199, 442, 861, 1344 |
| XceI | RCATGY | 1 cut(s) | 1531 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 530 |
| ZraI | GACGTC | 1 cut(s) | 387 |
| ZrmI | AGTACT | 3 cut(s) | 518, 569, 1587 |