RLG00000035930

Ring finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0002401
Physical Location & Seq
Reverse (-)
73602503 .. 73610133
7631 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035930

Sequence Viewer

Length: 3939 bp
ATGGGATTTGATAATGAGTGCATACTGAACATCCAATCTCTTGCGGGGGAGTATTTTTGCCCGGTGTGTCGTCTTCTCGTCTACCCAAACGAAGCATTACAGTCACAGTGCACTCATCTATACTGTAAGCCGTGCTTGACATACGTTGTGAGCACTACCAAAGCGTGTCCATACGATGGCTACTTAGTGACAGAAGCAGATGCCAAGCCCCTCGTTGAATCAAATAAAGCGCTCGCTGAAACCATAGGGAAAATAGCAGTTCATTGCCTGTATCACAGGAGTGGGTGCACATGGCAGGGGCCTTTATCTGATTGCACATCTCATTGTTCTGGTTGTGCCTTTGGAAATTCTCCTGTAGTCTGCAACAGGTGTGGAATCCAAATTGTGCATCGTCAAGTGCAGGAACACGCACAAAGTTGCCCTGGTGTGCAGCCCCAAGCACAGCAGGCAGAGGGTGTTCCAGACACTTCAGCCTCTGGCACGGCTGCTACTGCCAATCAGAACCAGGCTGCCGCTCAGACAGGTACAGTGACGTCTCAGACACAGGCTCCCCAAACTGCAAGTGCCACTATACCTGGAGCTGATTCGAATTCTCAGGCTCAAGCCGTTGTTCAAGCTGCTGCTCCGACTGCTGACCAGTGGTATCAGCAACAATATCAGCAATACTACCAGCAGTATCCTGGATATGATCCATACCAACAACAGTATCAGCAGTACTATCCCTATCAGCAGCCAGCAATTCCACAACTACAGCAGCCAGCAATTCCACAACCACAGCAGCCTTTGCAGGCTAATCCACCCTATGGGACTGTTCAGCCTCAACCGCAGGCATACCTGCAACCTCTGCTCCTACCTCAACCTCAACCATCTCAATCTCAAGCTCAACCCCAACCACAAGTTCAGCCCCCAATTATGCAGGCTCCTATGGCTGCGCATACTCAAAACCAGACATCAGTCAATCAACAGCTTCAACTTCAGCCTGCTATGGCACCACATTCACAAATTCAAGCACAGACTTACCCATCAGCTCATGGGCAGGCTCAACTTCCACCTCAATCATATTTCCAAGCCCAAATGCCTCAATATCAGCAGCCACAAGTTCAGCAGCTTACACAGTCCCAGCTTCAACAGAATCCCCAACTTCACCTGTCTCAGCCCATGAATGCTACAGTCCAGTCCCAGACACAGCTCCCATCATCTAATTCATCGACTGGCAATCATTTGTTCCCTCAATCTCACCTTCATCAACCAGTGCTCTCAGCAGCCTCCCAACAACATACTATGCAGGTGCAATCTCAAGGAGTGCCCAACTCTCAGTCACAAAACCATGTTCAGACTCAGATTCAGTTCCCTCAGCAACCCCTTTTGCGACCACCCCCGTTTCAAACAATAGTTCCAAACCAGCAGCAGACAGCCTTGTTGCCTTCACCTAACGTTATCTCTGCACAACAGCCTCCAGTTCACTCCTTTGCTCAACAACCTGGAATTCCTGTTCTTCAGCGCCCTGCAATGCAGCCAGTCCAACAGCTAAATCCTCAGCAATATTTCCACATACAACAGACACCCCCCACTGTGTCACAATTACGTCCCCAGGGCCAATCTCAATCATTCCCACAACATATTCGTGCCTCGAACCAGTCTCAGCAGAATGTTGTATTGTCTCAGGGCACGCAACATATTCAGCCCTCAAATCTTGTGGGACGGCCTATGATGCCAAGTCACGGAGTACTACCTCAGCCATATTCACAAACAGTAGGAGGAGTTCTGCCAAGGCCAATGTATCCTGCTCTAAACCATCAATCTACAAATCAGAATAATATAGGCAGAACCAACAACCAAGTGCAACTGGGAGCAAATTCAAGACCAACAATGACCGCAGGGCCAGCAGAGAAAGAAGCTGAGTTACCTGCTAATAATGTTGCACAGAATTTGGGTGTATTGTCTGCTGGAGGTGCTGATTCTGATGTTAAAACTGTGAAATCTGAGGTGGATATGAAGTCCATTGATGTTGGAAATAAACCTTCTTCTGAAGATAGAAGTTATCAGGGTAATACATCTGCCAAAGAGATTCCGGAGTCTAGGGGGATGTTGGGGGCGAATGGAGAGTCTGAAAGTAAGCCAACATTGAAGGAAGAGGGTGTAAATAGTACTTTGGAGGATTCAAGTAATGATAAATTGGGTCACCTTGTAGCTGAAGGTGCAAAAGATGTTCCCAGCAGTGGCATGAAACAGGGGGAGCGTAAAGAAATGCCATCAGAAGAAGCACAACTTCATGGAGTAAAGGATCAAAAATTGCAAAAAGATGCTAGTGGCACCGAGGAGGGTTCCCAAACTGTTTCTACTTCTTCAGCTCCTATAGGTCAAGTACAAGCTGGCGGCCTAATGCAACCTTCATATCCTGGTTCTGCTATACTGCAGCAAAGGCCAGGTGCGCCTCCTTTGTTACAAGTGCCTTCTTCAGGGCCTCCACATCAGATACTGGGTTCTGGACAACCCTTAATTCACGTAAGGCCTCAGGGACCTGGACATGTGCCTGGGCAGGCTTCTCATCTATCTGAGCATTTTCAATCACCTAGGGGAAACCTGGGATTTGCACCATCATCTGCGAGTGCAAGTCAGCATGGGCCTTATAACCAAAGCCATGCACCTCCTCATCCAGGGGCACCCAGAGGTCCACCATTTGGAGCACCCCCTAGTGCTTTTGATTTTCATGGGGGTATAATGGCCCGAGCAGCACCCCATGACCATGAAGGTCAGAGGGGTCAGCAGCGGCCGGCTTTTCAGATGGAACAGGGAGCAACTGGACAGCCATCCTCAAACATGCTCAGAATGAATGGAAATCCAGGCTTCGAATCCTTATCAACTCCTGGGTTGAGGGATGAAAGATTTAAGGCTTTGCCGGATGGGAGGTTGAATCCCTTCCCAGGAGACCCAACTCGTGTGATTAATCGATTAGGGTTTGAAGACGATCTCAAGCAATTCCCTAGGCCTTCTTATCTGGATTCTGAGCCTCTTCCAAAATTAGGGAGTTACTCCTCTAGAGCCTTCGATAGGAGACCTCTTGGAGTCAATTATGATGCTCGTCTAAATTCAGATCCTGCAGCTGGCTCTGCTCCAAGGTTCCTGTCTCCCTATGGTCATGGTGGATTACTTCATGCCAATGATACAGGTGGTCACCCAGATTTTGGTGGACAGCGCCTTATGGATGGTTTGGCTCGACGAAGTCCAATCAGAGATTATCCTGGCATCCCATCTCGTGGATTTAGGGGATTTGGCCCTGATGATTTTGATGGCAGGGATTTCCATCGATTTGGTGATCCGCTTGGCAGGGAATTCCATGAGAATAGGTTTCCTAATATGCACAGTCATTTTCATAGGGGTGAGTTTGAGGGTCCTGGTAATATGCGAATGGATGATCGTATGAGGAACGATTTGATTGGTCAAGGTGGTCACCCTGGTCATCTGCGGAGGGGAGATCATTTGGGTCCTCATAACTTGCCTGGTCATTTGCATTTGCGAGAGCATGTGGGTTTTGGTGTCCATCCTCGACATGCAGGGCCTGGGAGCTTTGAATCATTTATTGGCAACAGGGCAAGTCATCCACGTCTTGGCGAGCCTGGATTTAGGAGCAGCTTTTCACTTCAGAGATTTCCAAATGATGAAACTTATACAGGAGAGCTAGAGTCTTTTGATCACTCCAGGAAAAGGAAACCAGCCAGCATGGGATGGTGTCGTATCTGTAAAGTTGACTGCGAAACAGTTGAGGGCTTGGACGTGCATTCACAAACAAGGGAGCATCAGAGAATGGCTATGGAAATGGTACAAAGTATCAAGCAGAATGCCAAAAAGCAGAAATTAACCTCTGGTGATCAGTCCTCAGTAGAGGATGCAAACAAGTCAAAGATTTCCAGTTTTGAGAGCCGGGTTGAAAAGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000793 GO:0000794 GO:0001701 GO:0001756 GO:0001932 GO:0002020 GO:0002791 GO:0002793 GO:0003002 GO:0003007 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003300 GO:0003674 GO:0003779 GO:0003824 GO:0004672 GO:0004674 GO:0004713 GO:0005198 GO:0005200 GO:0005488 GO:0005509 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005856 GO:0005859 GO:0005865 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006936 GO:0006941 GO:0006996 GO:0007010 GO:0007015 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0007399 GO:0007417 GO:0007420 GO:0007507 GO:0007512 GO:0007517 GO:0008015 GO:0008092 GO:0008150 GO:0008152 GO:0008307 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009653 GO:0009790 GO:0009792 GO:0009887 GO:0009888 GO:0009893 GO:0009952 GO:0009987 GO:0010035 GO:0010038 GO:0010468 GO:0010604 GO:0010628 GO:0010737 GO:0010927 GO:0014706 GO:0014866 GO:0014896 GO:0014897 GO:0015629 GO:0016043 GO:0016301 GO:0016310 GO:0016459 GO:0016460 GO:0016740 GO:0016772 GO:0016773 GO:0018108 GO:0018193 GO:0018212 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0021591 GO:0022607 GO:0023052 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030036 GO:0030154 GO:0030239 GO:0030240 GO:0030241 GO:0030506 GO:0031032 GO:0031033 GO:0031034 GO:0031323 GO:0031399 GO:0031430 GO:0031433 GO:0031672 GO:0031674 GO:0031974 GO:0031981 GO:0032268 GO:0032501 GO:0032502 GO:0032879 GO:0032880 GO:0032989 GO:0032991 GO:0033058 GO:0034622 GO:0035051 GO:0035265 GO:0035282 GO:0035556 GO:0035994 GO:0035995 GO:0036211 GO:0036379 GO:0040007 GO:0040011 GO:0042221 GO:0042325 GO:0042692 GO:0042802 GO:0042805 GO:0043009 GO:0043056 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043292 GO:0043412 GO:0043549 GO:0043621 GO:0043933 GO:0044057 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044449 GO:0044464 GO:0044877 GO:0045214 GO:0045859 GO:0046872 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048589 GO:0048644 GO:0048646 GO:0048729 GO:0048731 GO:0048738 GO:0048739 GO:0048747 GO:0048769 GO:0048856 GO:0048869 GO:0050708 GO:0050714 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0050982 GO:0051015 GO:0051046 GO:0051047 GO:0051049 GO:0051050 GO:0051146 GO:0051171 GO:0051174 GO:0051222 GO:0051223 GO:0051239 GO:0051246 GO:0051338 GO:0051371 GO:0051393 GO:0051592 GO:0051606 GO:0051716 GO:0055001 GO:0055002 GO:0055003 GO:0055006 GO:0055007 GO:0055008 GO:0055013 GO:0060047 GO:0060048 GO:0060255 GO:0060322 GO:0060415 GO:0060419 GO:0060429 GO:0060537 GO:0061053 GO:0061061 GO:0065003 GO:0065007 GO:0065009 GO:0070013 GO:0070201 GO:0070925 GO:0071688 GO:0071704 GO:0071840 GO:0072359 GO:0080090 GO:0090087 GO:0090257 GO:0097435 GO:0097493 GO:0099080 GO:0099081 GO:0099512 GO:0140096 GO:1901077 GO:1901564 GO:1901897 GO:1903530 GO:1903532 GO:1904951
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1313

Amino Acids

142.89

Weight (kDa)

7.03

Isoelectric Point (pI)

59.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2631
AarI CACCTGC 1 cut(s) 1276
AatII GACGTC 1 cut(s) 536
Acc16I TGCGCA 1 cut(s) 933
Acc36I ACCTGC 3 cut(s) 843, 1276, 1915
AccB1I GGYRCC 3 cut(s) 988, 2312, 2662
AccB7I CCANNNNNTGG 6 cut(s) 176, 803, 2681, 3185, 3257, 3608
AccBSI CCGCTC 1 cut(s) 515
AccI GTMKAC 1 cut(s) 81
AccIII TCCGGA 1 cut(s) 2071
AciI CCGC 8 cut(s) 44, 513, 824, 1875, 2376, 2770, 3320, 3466
AclI AACGTT 1 cut(s) 1434
AclWI GGATC 4 cut(s) 683, 2292, 3089, 3311
AcoI YGGCCR 1 cut(s) 2771
AcsI RAATTY 8 cut(s) 346, 589, 1002, 1485, 1855, 1927, 3088, 3332
AcuI CTGAAG 8 cut(s) 453, 959, 1481, 2049, 2214, 2331, 2442, 3626
AcyI GRCGYC 1 cut(s) 533
AfaI GTAC 6 cut(s) 526, 716, 1728, 2149, 2367, 3822
AfeI AGCGCT 1 cut(s) 231
AflIII ACRYGT 1 cut(s) 2527
AjiI CACGTC 2 cut(s) 3605, 3775
AjuI GAANNNNNNNTTGG 4 cut(s) 882, 914, 3564, 3596
AleI CACNNNNGTG 1 cut(s) 279
AloI GAACNNNNNNTCC 2 cut(s) 1476, 1508
Alw21I GWGCWC 5 cut(s) 113, 155, 290, 1257, 2689
Alw26I GTCTC 7 cut(s) 540, 1155, 1644, 1665, 2922, 3049, 3132
Alw44I GTGCAC 2 cut(s) 109, 286
AlwI GGATC 4 cut(s) 683, 2292, 3089, 3311
AlwNI CAGNNNCTG 4 cut(s) 476, 2479, 3098, 3560
Ama87I CYCGRG 1 cut(s) 2727
Aor13HI TCCGGA 1 cut(s) 2071
Aor51HI AGCGCT 1 cut(s) 231
ApaLI GTGCAC 2 cut(s) 109, 286
ApoI RAATTY 8 cut(s) 346, 589, 1002, 1485, 1855, 1927, 3088, 3332
ArsI GACNNNNNNTTYG 2 cut(s) 2090, 2122
AseI ATTAAT 1 cut(s) 2946
Asp700I GAANNNNTTC 1 cut(s) 2918
AspA2I CCTAGG 2 cut(s) 2573, 2984
AspLEI GCGC 5 cut(s) 232, 934, 1503, 2434, 3198
AsuC2I CCSGG 2 cut(s) 62, 3923
AsuII TTCGAA 2 cut(s) 587, 2850
AvaI CYCGRG 1 cut(s) 2727
AvaII GGWCC 4 cut(s) 2519, 2672, 3392, 3485
AvrII CCTAGG 2 cut(s) 2573, 2984
AxyI CCTNAGG 1 cut(s) 2514
BaeGI GKGCMC 5 cut(s) 113, 290, 1308, 1670, 2665
BaeI ACNNNNGTAYC 2 cut(s) 689, 722
BanI GGYRCC 3 cut(s) 988, 2312, 2662
BarI GAAGNNNNNNTAC 2 cut(s) 1887, 1919
BauI CACGAG 2 cut(s) 2937, 3255
BbsI GAAGAC 2 cut(s) 65, 2970
Bbv12I GWGCWC 5 cut(s) 113, 155, 290, 1257, 2689
BbvCI CCTCAGC 3 cut(s) 1353, 1536, 1734
BceAI ACGGC 4 cut(s) 115, 498, 590, 1718
BciVI GTATCC 2 cut(s) 687, 1791
BclI TGATCA 2 cut(s) 3691, 3868
BcnI CCSGG 2 cut(s) 62, 3923
BcoDI GTCTC 7 cut(s) 540, 1155, 1644, 1665, 2922, 3049, 3132
BfaI CTAG 7 cut(s) 2079, 2307, 2574, 2694, 2985, 3039, 3680
BfmI CTRYAG 6 cut(s) 354, 749, 1167, 2355, 2414, 3099
BfoI RGCGCY 3 cut(s) 233, 1504, 3199
BfuAI ACCTGC 3 cut(s) 843, 1276, 1915
BfuI GTATCC 2 cut(s) 687, 1791
BlnI CCTAGG 2 cut(s) 2573, 2984
BmcAI AGTACT 3 cut(s) 716, 1728, 2149
Bme18I GGWCC 4 cut(s) 2519, 2672, 3392, 3485
BmeT110I CYCGRG 1 cut(s) 2727
BmgBI CACGTC 2 cut(s) 3605, 3775
BmrI ACTGGG 2 cut(s) 1856, 2489
BmsI GCATC 8 cut(s) 190, 397, 1701, 2293, 3067, 3255, 3805, 3877
BmuI ACTGGG 2 cut(s) 1856, 2489
BoxI GACNNNNGTC 1 cut(s) 953
BpiI GAAGAC 2 cut(s) 65, 2970
BpmI CTGGAG 4 cut(s) 597, 1440, 1968, 3682
Bpu10I CCTNAGC 3 cut(s) 1353, 1536, 1734
Bpu14I TTCGAA 2 cut(s) 587, 2850
BpuEI CTTGAG 4 cut(s) 585, 861, 1281, 2957
BpuMI CCSGG 2 cut(s) 62, 3923
Bsa29I ATCGAT 2 cut(s) 2950, 3307
BsaAI YACGTR 1 cut(s) 2506
BsaBI GATNNNNATC 1 cut(s) 3303
BsaHI GRCGYC 1 cut(s) 533
BsaI GGTCTC 2 cut(s) 2922, 3049
BsaWI WCCGGW 1 cut(s) 2071
BsaXI ACNNNNNCTCC 4 cut(s) 532, 562, 831, 861
Bse118I RCCGGY 1 cut(s) 2773
Bse21I CCTNAGG 1 cut(s) 2514
Bse3DI GCAATG 2 cut(s) 262, 1515
Bse8I GATNNNNATC 1 cut(s) 3303
BseAI TCCGGA 1 cut(s) 2071
BseCI ATCGAT 2 cut(s) 2950, 3307
BseJI GATNNNNATC 1 cut(s) 3303
BseMI GCAATG 2 cut(s) 262, 1515
BseRI GAGGAG 4 cut(s) 1773, 2333, 2640, 3025
BseSI GKGCMC 5 cut(s) 113, 290, 1308, 1670, 2665
BseX3I CGGCCG 1 cut(s) 2771
BseYI CCCAGC 2 cut(s) 1119, 2213
BsgI GTGCAG 3 cut(s) 419, 449, 1428
Bsh1285I CGRYCG 1 cut(s) 2774
BshNI GGYRCC 3 cut(s) 988, 2312, 2662
BshVI ATCGAT 2 cut(s) 2950, 3307
BsiEI CGRYCG 1 cut(s) 2774
BsiHKAI GWGCWC 5 cut(s) 113, 155, 290, 1257, 2689
BsiHKCI CYCGRG 1 cut(s) 2727
BsiSI CCGG 5 cut(s) 62, 2072, 2774, 2900, 3922
BslFI GGGAC 6 cut(s) 820, 1102, 1162, 1572, 1713, 2532
BsmAI GTCTC 7 cut(s) 540, 1155, 1644, 1665, 2922, 3049, 3132
BsmBI CGTCTC 1 cut(s) 540
BsmFI GGGAC 6 cut(s) 820, 1102, 1162, 1572, 1713, 2532
BsmI GAATGC 3 cut(s) 1168, 3778, 3844
Bso31I GGTCTC 2 cut(s) 2922, 3049
BsoBI CYCGRG 1 cut(s) 2727
Bsp119I TTCGAA 2 cut(s) 587, 2850
Bsp1286I GDGCHC 8 cut(s) 113, 155, 290, 1257, 1308, 1670, 2665, 2689
Bsp13I TCCGGA 1 cut(s) 2071
Bsp143I GATC 9 cut(s) 688, 2284, 2968, 3094, 3316, 3415, 3475, 3691, 3868
BspACI CCGC 8 cut(s) 44, 513, 824, 1875, 2376, 2770, 3320, 3466
BspDI ATCGAT 2 cut(s) 2950, 3307
BspEI TCCGGA 1 cut(s) 2071
BspMAI CTGCAG 2 cut(s) 2418, 3103
BspMI ACCTGC 3 cut(s) 843, 1276, 1915
BspPI GGATC 4 cut(s) 683, 2292, 3089, 3311
BspT104I TTCGAA 2 cut(s) 587, 2850
BspT107I GGYRCC 3 cut(s) 988, 2312, 2662
BspTNI GGTCTC 2 cut(s) 2922, 3049
BsrBI CCGCTC 1 cut(s) 515
BsrDI GCAATG 2 cut(s) 262, 1515
BsrFI RCCGGY 1 cut(s) 2773
BssAI RCCGGY 1 cut(s) 2773
BssMI GATC 9 cut(s) 688, 2284, 2968, 3094, 3316, 3415, 3475, 3691, 3868
BssNI GRCGYC 1 cut(s) 533
BssSI CACGAG 2 cut(s) 2937, 3255
BssT1I CCWWGG 4 cut(s) 1769, 2573, 2984, 3116
Bst2BI CACGAG 2 cut(s) 2937, 3255
Bst6I CTCTTC 2 cut(s) 2127, 3018
BstACI GRCGYC 1 cut(s) 533
BstAPI GCANNNNNTGC 2 cut(s) 784, 844
BstBAI YACGTR 1 cut(s) 2506
BstBI TTCGAA 2 cut(s) 587, 2850
BstEII GGTNACC 3 cut(s) 2180, 3173, 3449
BstENI CCTNNNNNAGG 3 cut(s) 2457, 2655, 3049
BstH2I RGCGCY 3 cut(s) 233, 1504, 3199
BstHHI GCGC 5 cut(s) 232, 934, 1503, 2434, 3198
BstKTI GATC 9 cut(s) 691, 2287, 2971, 3097, 3319, 3418, 3478, 3694, 3871
BstMAI GTCTC 7 cut(s) 540, 1155, 1644, 1665, 2922, 3049, 3132
BstMBI GATC 9 cut(s) 688, 2284, 2968, 3094, 3316, 3415, 3475, 3691, 3868
BstMCI CGRYCG 1 cut(s) 2774
BstNSI RCATGY 4 cut(s) 2531, 2824, 3527, 3554
BstPAI GACNNNNGTC 1 cut(s) 953
BstPI GGTNACC 3 cut(s) 2180, 3173, 3449
BstSFI CTRYAG 6 cut(s) 354, 749, 1167, 2355, 2414, 3099
BstSLI GKGCMC 5 cut(s) 113, 290, 1308, 1670, 2665
BstV2I GAAGAC 2 cut(s) 65, 2970
BstX2I RGATCY 1 cut(s) 3094
BstXI CCANNNNNNTGG 1 cut(s) 3311
BstYI RGATCY 1 cut(s) 3094
BstZI CGGCCG 1 cut(s) 2771
Bsu15I ATCGAT 2 cut(s) 2950, 3307
Bsu36I CCTNAGG 1 cut(s) 2514
BsuI GTATCC 2 cut(s) 687, 1791
BsuTUI ATCGAT 2 cut(s) 2950, 3307
BtrI CACGTC 2 cut(s) 3605, 3775
BtsI GCAGTG 1 cut(s) 2224
BtsIMutI CAGTG 6 cut(s) 113, 534, 644, 1257, 1569, 2224
BveI ACCTGC 3 cut(s) 843, 1276, 1915
CaiI CAGNNNCTG 4 cut(s) 476, 2479, 3098, 3560
CfoI GCGC 5 cut(s) 232, 934, 1503, 2434, 3198
Cfr10I RCCGGY 1 cut(s) 2773
ClaI ATCGAT 2 cut(s) 2950, 3307
Csp6I GTAC 6 cut(s) 525, 715, 1727, 2148, 2366, 3821
CspCI CAANNNNNGTGG 4 cut(s) 352, 387, 1677, 1712
CviQI GTAC 6 cut(s) 525, 715, 1727, 2148, 2366, 3821
DpnI GATC 9 cut(s) 690, 2286, 2970, 3096, 3318, 3417, 3477, 3693, 3870
DpnII GATC 9 cut(s) 688, 2284, 2968, 3094, 3316, 3415, 3475, 3691, 3868
EaeI YGGCCR 1 cut(s) 2771
EagI CGGCCG 1 cut(s) 2771
Eam1104I CTCTTC 2 cut(s) 2127, 3018
EarI CTCTTC 2 cut(s) 2127, 3018
EclXI CGGCCG 1 cut(s) 2771
Eco130I CCWWGG 4 cut(s) 1769, 2573, 2984, 3116
Eco147I AGGCCT 2 cut(s) 2512, 2989
Eco31I GGTCTC 2 cut(s) 2922, 3049
Eco47I GGWCC 4 cut(s) 2519, 2672, 3392, 3485
Eco47III AGCGCT 1 cut(s) 231
Eco52I CGGCCG 1 cut(s) 2771
Eco57I CTGAAG 8 cut(s) 453, 959, 1481, 2049, 2214, 2331, 2442, 3626
Eco81I CCTNAGG 1 cut(s) 2514
Eco88I CYCGRG 1 cut(s) 2727
Eco91I GGTNACC 3 cut(s) 2180, 3173, 3449
EcoNI CCTNNNNNAGG 3 cut(s) 2457, 2655, 3049
EcoO109I RGGNCCY 6 cut(s) 299, 2462, 2519, 3392, 3485, 3557
EcoO65I GGTNACC 3 cut(s) 2180, 3173, 3449
EcoRI GAATTC 3 cut(s) 589, 1485, 3332
EcoT14I CCWWGG 4 cut(s) 1769, 2573, 2984, 3116
ErhI CCWWGG 4 cut(s) 1769, 2573, 2984, 3116
Esp3I CGTCTC 1 cut(s) 540
FalI AAGNNNNNCTT 4 cut(s) 119, 151, 2253, 2285
FaqI GGGAC 6 cut(s) 820, 1102, 1162, 1572, 1713, 2532
FauI CCCGC 1 cut(s) 37
FbaI TGATCA 2 cut(s) 3691, 3868
FblI GTMKAC 1 cut(s) 81
FspBI CTAG 7 cut(s) 2079, 2307, 2574, 2694, 2985, 3039, 3680
FspI TGCGCA 1 cut(s) 933
GlaI GCGC 5 cut(s) 231, 933, 1502, 2433, 3197
GsaI CCCAGC 2 cut(s) 1123, 2217
GsuI CTGGAG 4 cut(s) 597, 1440, 1968, 3682
HaeII RGCGCY 3 cut(s) 233, 1504, 3199
HapII CCGG 5 cut(s) 62, 2072, 2774, 2900, 3922
HhaI GCGC 5 cut(s) 232, 934, 1503, 2434, 3198
Hin1I GRCGYC 1 cut(s) 533
Hin6I GCGC 5 cut(s) 230, 932, 1501, 2432, 3196
HinP1I GCGC 5 cut(s) 230, 932, 1501, 2432, 3196
HincII GTYRAC 1 cut(s) 3748
HindII GTYRAC 1 cut(s) 3748
HpaII CCGG 5 cut(s) 62, 2072, 2774, 2900, 3922
Hpy166II GTNNAC 7 cut(s) 82, 111, 288, 1462, 2675, 3191, 3748
Hpy188III TCNNGA 6 cut(s) 461, 1860, 2072, 2487, 2999, 3039
Hpy8I GTNNAC 7 cut(s) 82, 111, 288, 1462, 2675, 3191, 3748
Hpy99I CGWCG 1 cut(s) 3222
HpyCH4IV ACGT 7 cut(s) 144, 533, 1434, 1585, 2505, 3604, 3774
HpySE526I ACGT 7 cut(s) 144, 533, 1434, 1585, 2505, 3604, 3774
Hsp92I GRCGYC 1 cut(s) 533
HspAI GCGC 5 cut(s) 230, 932, 1501, 2432, 3196
Kpn2I TCCGGA 1 cut(s) 2071
KroI GCCGGC 1 cut(s) 2773
KroNI GCCGGC 1 cut(s) 2775
Ksp22I TGATCA 2 cut(s) 3691, 3868
Kzo9I GATC 9 cut(s) 688, 2284, 2968, 3094, 3316, 3415, 3475, 3691, 3868
LweI GCATC 8 cut(s) 190, 397, 1701, 2293, 3067, 3255, 3805, 3877
MaeI CTAG 7 cut(s) 2079, 2307, 2574, 2694, 2985, 3039, 3680
MaeII ACGT 7 cut(s) 144, 533, 1434, 1585, 2505, 3604, 3774
MalI GATC 9 cut(s) 690, 2286, 2970, 3096, 3318, 3417, 3477, 3693, 3870
MbiI CCGCTC 1 cut(s) 515
MboI GATC 9 cut(s) 688, 2284, 2968, 3094, 3316, 3415, 3475, 3691, 3868
MflI RGATCY 1 cut(s) 3094
MhlI GDGCHC 8 cut(s) 113, 155, 290, 1257, 1308, 1670, 2665, 2689
MlyI GAGTC 5 cut(s) 1330, 2084, 2114, 3075, 3692
MmeI TCCRAC 3 cut(s) 650, 1546, 1990
MroI TCCGGA 1 cut(s) 2071
MroNI GCCGGC 1 cut(s) 2773
MroXI GAANNNNTTC 1 cut(s) 2918
MseI TTAA 5 cut(s) 1968, 2498, 2889, 2946, 3857
MslI CAYNNNNRTG 5 cut(s) 279, 1623, 2745, 3159, 3378
MspA1I CMGCKG 2 cut(s) 2770, 3104
MspI CCGG 5 cut(s) 62, 2072, 2774, 2900, 3922
Mva1269I GAATGC 3 cut(s) 1168, 3778, 3844
NaeI GCCGGC 1 cut(s) 2775
NciI CCSGG 2 cut(s) 62, 3923
NdeII GATC 9 cut(s) 688, 2284, 2968, 3094, 3316, 3415, 3475, 3691, 3868
NgoMIV GCCGGC 1 cut(s) 2773
NmuCI GTSAC 9 cut(s) 102, 187, 529, 1317, 1575, 1718, 2180, 3173, 3449
NsbI TGCGCA 1 cut(s) 933
NspI RCATGY 4 cut(s) 2531, 2824, 3527, 3554
NspV TTCGAA 2 cut(s) 587, 2850
OliI CACNNNNGTG 1 cut(s) 279
PaqCI CACCTGC 1 cut(s) 1276
PasI CCCWGGG 1 cut(s) 1591
PceI AGGCCT 2 cut(s) 2512, 2989
PciI ACATGT 1 cut(s) 2527
PctI GAATGC 3 cut(s) 1168, 3778, 3844
PdiI GCCGGC 1 cut(s) 2775
PdmI GAANNNNTTC 1 cut(s) 2918
PflFI GACNNNGTC 1 cut(s) 3222
PflMI CCANNNNNTGG 6 cut(s) 176, 803, 2681, 3185, 3257, 3608
PfoI TCCNGGA 2 cut(s) 679, 3698
PleI GAGTC 5 cut(s) 1330, 2083, 2113, 3074, 3691
PpsI GAGTC 5 cut(s) 1330, 2083, 2113, 3074, 3691
Ppu21I YACGTR 1 cut(s) 2506
PpuMI RGGWCCY 3 cut(s) 2519, 3392, 3485
PscI ACATGT 1 cut(s) 2527
PshAI GACNNNNGTC 1 cut(s) 953
PshBI ATTAAT 1 cut(s) 2946
PsiI TTATAA 1 cut(s) 2631
Psp1406I AACGTT 1 cut(s) 1434
Psp5II RGGWCCY 3 cut(s) 2519, 3392, 3485
PspEI GGTNACC 3 cut(s) 2180, 3173, 3449
PspFI CCCAGC 2 cut(s) 1119, 2213
PspPPI RGGWCCY 3 cut(s) 2519, 3392, 3485
PsrI GAACNNNNNNTAC 2 cut(s) 1746, 1778
PstI CTGCAG 2 cut(s) 2418, 3103
PstNI CAGNNNCTG 4 cut(s) 476, 2479, 3098, 3560
PsuI RGATCY 1 cut(s) 3094
PsyI GACNNNGTC 1 cut(s) 3222
PvuII CAGCTG 1 cut(s) 3104
RsaI GTAC 6 cut(s) 526, 716, 1728, 2149, 2367, 3822
RsaNI GTAC 6 cut(s) 525, 715, 1727, 2148, 2366, 3821
RseI CAYNNNNRTG 5 cut(s) 279, 1623, 2745, 3159, 3378
SaqAI TTAA 5 cut(s) 1968, 2498, 2889, 2946, 3857
Sau3AI GATC 9 cut(s) 688, 2284, 2968, 3094, 3316, 3415, 3475, 3691, 3868
ScaI AGTACT 3 cut(s) 716, 1728, 2149
SchI GAGTC 5 cut(s) 1330, 2084, 2114, 3075, 3692
SduI GDGCHC 8 cut(s) 113, 155, 290, 1257, 1308, 1670, 2665, 2689
SfaNI GCATC 8 cut(s) 190, 397, 1701, 2293, 3067, 3255, 3805, 3877
SfcI CTRYAG 6 cut(s) 354, 749, 1167, 2355, 2414, 3099
SfuI TTCGAA 2 cut(s) 587, 2850
SinI GGWCC 4 cut(s) 2519, 2672, 3392, 3485
SmiMI CAYNNNNRTG 5 cut(s) 279, 1623, 2745, 3159, 3378
SmlI CTYRAG 4 cut(s) 600, 876, 1296, 2972
SmoI CTYRAG 4 cut(s) 600, 876, 1296, 2972
SseBI AGGCCT 2 cut(s) 2512, 2989
SsiI CCGC 8 cut(s) 44, 513, 824, 1875, 2376, 2770, 3320, 3466
SspI AATATT 1 cut(s) 1544
SspMI CTAG 7 cut(s) 2079, 2307, 2574, 2694, 2985, 3039, 3680
StuI AGGCCT 2 cut(s) 2512, 2989
StyI CCWWGG 4 cut(s) 1769, 2573, 2984, 3116
TaiI ACGT 7 cut(s) 147, 536, 1437, 1588, 2508, 3607, 3777
TaqI TCGA 9 cut(s) 587, 1208, 1631, 2850, 2950, 3048, 3217, 3307, 3547
TatI WGTACW 4 cut(s) 714, 1726, 2147, 2365
TauI GCSGC 3 cut(s) 515, 2379, 2773
Tru1I TTAA 5 cut(s) 1968, 2498, 2889, 2946, 3857
Tru9I TTAA 5 cut(s) 1968, 2498, 2889, 2946, 3857
TscAI CASTG 6 cut(s) 113, 534, 644, 1257, 1576, 2224
TseFI GTSAC 9 cut(s) 102, 187, 529, 1317, 1575, 1718, 2180, 3173, 3449
Tsp45I GTSAC 9 cut(s) 102, 187, 529, 1317, 1575, 1718, 2180, 3173, 3449
TspGWI ACGGA 1 cut(s) 1737
TspRI CASTG 6 cut(s) 113, 534, 644, 1257, 1576, 2224
Tth111I GACNNNGTC 1 cut(s) 3222
Van91I CCANNNNNTGG 6 cut(s) 176, 803, 2681, 3185, 3257, 3608
VneI GTGCAC 2 cut(s) 109, 286
VpaK11BI GGWCC 4 cut(s) 2519, 2672, 3392, 3485
VspI ATTAAT 1 cut(s) 2946
XagI CCTNNNNNAGG 3 cut(s) 2457, 2655, 3049
XapI RAATTY 8 cut(s) 346, 589, 1002, 1485, 1855, 1927, 3088, 3332
XbaI TCTAGA 1 cut(s) 3038
XceI RCATGY 4 cut(s) 2531, 2824, 3527, 3554
XcmI CCANNNNNNNNNTGG 1 cut(s) 677
XmaJI CCTAGG 2 cut(s) 2573, 2984
XmiI GTMKAC 1 cut(s) 81
XmnI GAANNNNTTC 1 cut(s) 2918
XspI CTAG 7 cut(s) 2079, 2307, 2574, 2694, 2985, 3039, 3680
ZraI GACGTC 1 cut(s) 534
ZrmI AGTACT 3 cut(s) 716, 1728, 2149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.