RchiOBHm_Chr5g0067371

Ring finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0002401
Physical Location & Seq
Reverse (-)
73539129 .. 73542688
3560 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34309

Sequence Viewer

Length: 2715 bp
ATGGGATTTGATAATGAGTGCATACTGAACATCCAATCTCTTGCGGGAGAGTACTTTTGCCCGGTCTGTCGTCTTCTTGTCTACCCAAATGAAGCATTGCAATCACAGTGCACTCATCTATACTGTAAGCCCTGTTTGACATACGTCGTGAGCACTACCAAAGCGTGTCCATACGATGGCTACTTAGTGACAGAAGCCGATGCGAAGCCCCTCGTTGAATCAAATAAAGCGCTCGCTGAAACCATAGGGAAAATAGCAGTTCATTGCCTGTATCACAGGAGTGGGTGCACATGGCAGGGGCCTTTATCTGATTGCACATCTCATTGTTCTGGTTGTGCCTTTGGAAATTCTCCTGTAGTCTGCAACAGGTGTGGAATCCAAATTGTGCATCGTCAAGTGCAGGAACACGCACAAAGTTGCCCTGGTGTGCAGCCCCAAGCACAGCAGGCAGAGGGTGTTCCAGACACTTCAGCCTCTGGCACAGCTGCTACTGCCAATCAGAACCAGGCTGCCACTCAGACAGGTACAGTGACGTCTCAGACACAGGCTCCCCAAACTGCAAGTGCCACTATACCTGGAGCTGATTCGAATTCTCAGGCTCAAGCTGTTGTTCAAGTTGCTGCTCCGACTGCTGACCAGTGGTATCAGCAACAATATCAGCAGTACTACCAGCAGTATCCTGGATATGATCCATACCAACAACAGTATCAGCAGTACTATCCCTATCAGCAGCCAGCAATTCCACAACCACAGCAGCCTTTGCAGGCTAATCCACCCTATGGGACTGTTCAGCCTCAACCGCAGGCATACCTGCAACCTCCGCTCCTACCTCAACCTCAACCTCAACCACAGACCCAACCATCTCAATCTCAAGCTCAACCCCAACCACAAGTTCAGCCCCCAATTATGCAGGCTCCTATGGCTGCTCATACTCAAAACCAGACATCAGTCAATCAACAGCTTCAACTTCAGCCTGCTATGGCACCACATTCACAAATTCAGGCACAGTCTTACCCATCAGCTCATGGGCAGGCTCAACTTCCACCTCAAGCATATTTCCAAGTCCAAATGCCTCAATATCAGCAGCCACAAGTTCAGCAGCTTACACAGTCCCAGCTTCAACAGAATCCCCAACTTCACCCGTCTCAGCCCATGAATGCTACAGTCCAGTCCCAGGCACAGCTCCCATCATCTAATTCATTGACTGGCAATCATTTGTTCCCTCAATCTCACCTTCCTCAACCAGTGCTTTCAGCAGCCTCCCAACAACGTACTATGCAGGTGCAATCTCAAGGAGTGCCCAACTCTCAGTCGCAAAACCATGTTCAGACTCAGATTCAGTTCCCTCAGCAACCCCTTTTGCGACCACCCCCGTTTCAAACAATAGTTCCAAACCAGCAGCAGACAGCCTTGTTGCCTTCACCTAACGTTATCTCTGCACAACAGCCTCCAGTTCACTCCTTTGCTCAACAATCTGGAATTCCTGTTCTCCAGCGCCCTGCAATGCAGCCAGTCCAACAGCTAAATCCTCAGCAATATTTCCACATACAACAGACACCCCCCACATTGTCGCAATTACGTCCCCAGGGCCAATCTCAATCATTCTCACAACATATTCGTGCCTCGAACCAGTCTCAGCAGAATGTTGTATCGTCTCAGGGCATGCAACATATTCAGCCCTCAAATCTTGTGGGACGACCTATGATGCCAAGTCATGGTGTACTACCTCAGCCATATGCACAAACAGTAGGAGGAGTTCTGCCAAGACCAATGTATCCTGCTCTAAACCATCAATCTACAAATCAGAATAATATAGGCAGAACCAACAACCAAGTGCAACTGGGAGCAAATTCAAGACCAACAATGACCGCAAGGCCAGCAGAGAAAGAAGCTGAGTTACCTGCTAATAATGTTGCACAGAATTTGGGTGTATTGTCTGCTGTAGGTGCTGATTCCGAGGTTAAAACTGTGAAATCTGAGGTGGATATGAAGTCCATTGATGTTGGAAATAAACCTTCTTCTGAAGATAGAAGTTATCAGGGTAATACATCTGCCAAAGAGATTCCGGAGTCTAGGGGGATGTTGGGGGCGAATGGAGAGTCTGAAAGTAAGCCAACATTGAAGGAAGAGGGTGTAAATAGTACTTTGGAGGATTCAAGTAATGATAAATTGGGTGAACTTGTAGCTGAAGGTGCAAAAGATGTTCCCAGCAGTGGCATGAAACAGGGGGAGCGTAAAGAAATGCCATCAGAAGAAGCACAACTTCATGGAGTAAAGGATCAAAAATTGCAAAAAGATGCTAGTGGCACCGAGGAGGGTTCCCAAAGTGTTTCTACTTCTTCAGCTCCTATAGGTCAAGTACAAGCTGGCGGCTTGATGCAACCTTCATATCCTGGTTCTGCTATACTCCAGCAAAGGCCAGGTGCACCTCCTTCGTTACAAGTGCCTTCTTCAGGGCCTCCACATCATATACCGGGTTCTGGACAACCCTTAATTCATGCAAGGCCTCAGGGACCTGGACATGTGCCTGGGCAGGCTTCTCATCTATCTGAGCATTTTCAATCACCTAGGGGAAACCTGGGATTTGCAGCATCATCTGCAAGTGCAAGTCAGCATGGGCCTTATAACCAAAGCCATGCGCCTCCTCATCCAGGGGCACCCAGAGGTCCACCATTTGGAGCACCCCCTAGTGCTTTTGATTTTCATGGGGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000793 GO:0000794 GO:0001701 GO:0001756 GO:0001932 GO:0002020 GO:0002791 GO:0002793 GO:0003002 GO:0003007 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003300 GO:0003674 GO:0003779 GO:0003824 GO:0004672 GO:0004674 GO:0004713 GO:0005198 GO:0005200 GO:0005488 GO:0005509 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005856 GO:0005859 GO:0005865 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006936 GO:0006941 GO:0006996 GO:0007010 GO:0007015 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0007399 GO:0007417 GO:0007420 GO:0007507 GO:0007512 GO:0007517 GO:0008015 GO:0008092 GO:0008150 GO:0008152 GO:0008307 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009653 GO:0009790 GO:0009792 GO:0009887 GO:0009888 GO:0009893 GO:0009952 GO:0009987 GO:0010035 GO:0010038 GO:0010468 GO:0010604 GO:0010628 GO:0010737 GO:0010927 GO:0014706 GO:0014866 GO:0014896 GO:0014897 GO:0015629 GO:0016043 GO:0016301 GO:0016310 GO:0016459 GO:0016460 GO:0016740 GO:0016772 GO:0016773 GO:0018108 GO:0018193 GO:0018212 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0021591 GO:0022607 GO:0023052 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030036 GO:0030154 GO:0030239 GO:0030240 GO:0030241 GO:0030506 GO:0031032 GO:0031033 GO:0031034 GO:0031323 GO:0031399 GO:0031430 GO:0031433 GO:0031672 GO:0031674 GO:0031974 GO:0031981 GO:0032268 GO:0032501 GO:0032502 GO:0032879 GO:0032880 GO:0032989 GO:0032991 GO:0033058 GO:0034622 GO:0035051 GO:0035265 GO:0035282 GO:0035556 GO:0035994 GO:0035995 GO:0036211 GO:0036379 GO:0040007 GO:0040011 GO:0042221 GO:0042325 GO:0042692 GO:0042802 GO:0042805 GO:0043009 GO:0043056 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043292 GO:0043412 GO:0043549 GO:0043621 GO:0043933 GO:0044057 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044449 GO:0044464 GO:0044877 GO:0045214 GO:0045859 GO:0046872 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048589 GO:0048644 GO:0048646 GO:0048729 GO:0048731 GO:0048738 GO:0048739 GO:0048747 GO:0048769 GO:0048856 GO:0048869 GO:0050708 GO:0050714 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0050982 GO:0051015 GO:0051046 GO:0051047 GO:0051049 GO:0051050 GO:0051146 GO:0051171 GO:0051174 GO:0051222 GO:0051223 GO:0051239 GO:0051246 GO:0051338 GO:0051371 GO:0051393 GO:0051592 GO:0051606 GO:0051716 GO:0055001 GO:0055002 GO:0055003 GO:0055006 GO:0055007 GO:0055008 GO:0055013 GO:0060047 GO:0060048 GO:0060255 GO:0060322 GO:0060415 GO:0060419 GO:0060429 GO:0060537 GO:0061053 GO:0061061 GO:0065003 GO:0065007 GO:0065009 GO:0070013 GO:0070201 GO:0070925 GO:0071688 GO:0071704 GO:0071840 GO:0072359 GO:0080090 GO:0090087 GO:0090257 GO:0097435 GO:0097493 GO:0099080 GO:0099081 GO:0099512 GO:0140096 GO:1901077 GO:1901564 GO:1901897 GO:1903530 GO:1903532 GO:1904951
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

904

Amino Acids

97.27

Weight (kDa)

6.5

Isoelectric Point (pI)

69.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2625
AarI CACCTGC 1 cut(s) 1270
AatII GACGTC 1 cut(s) 536
Acc36I ACCTGC 3 cut(s) 819, 1270, 1909
AccB1I GGYRCC 3 cut(s) 982, 2306, 2656
AccB7I CCANNNNNTGG 4 cut(s) 176, 779, 1715, 2675
AccBSI CCGCTC 1 cut(s) 823
AccI GTMKAC 1 cut(s) 81
AccIII TCCGGA 1 cut(s) 2065
AciI CCGC 5 cut(s) 44, 800, 821, 1869, 2370
AclI AACGTT 1 cut(s) 1428
AclWI GGATC 2 cut(s) 683, 2286
AcsI RAATTY 6 cut(s) 346, 589, 996, 1479, 1849, 1921
AcuI CTGAAG 6 cut(s) 453, 953, 2043, 2208, 2325, 2436
AcyI GRCGYC 1 cut(s) 533
AfaI GTAC 8 cut(s) 53, 526, 665, 716, 1273, 1722, 2143, 2361
AfeI AGCGCT 1 cut(s) 231
AfiI CCNNNNNNNGG 9 cut(s) 176, 779, 1174, 1715, 2213, 2453, 2480, 2651, 2675
AflIII ACRYGT 1 cut(s) 2521
AgsI TTSAA 9 cut(s) 218, 614, 965, 1121, 1379, 1854, 2122, 2157, 2561
AjuI GAANNNNNNNTTGG 2 cut(s) 876, 908
AleI CACNNNNGTG 1 cut(s) 279
AloI GAACNNNNNNTCC 2 cut(s) 1470, 1502
Alw21I GWGCWC 5 cut(s) 113, 155, 290, 2428, 2683
Alw26I GTCTC 4 cut(s) 540, 1149, 1638, 1659
Alw44I GTGCAC 3 cut(s) 109, 286, 2424
AlwI GGATC 2 cut(s) 683, 2286
AlwNI CAGNNNCTG 1 cut(s) 476
Aor13HI TCCGGA 1 cut(s) 2065
Aor51HI AGCGCT 1 cut(s) 231
AoxI GGCC 7 cut(s) 299, 1588, 1874, 2417, 2456, 2504, 2618
ApaLI GTGCAC 3 cut(s) 109, 286, 2424
ApoI RAATTY 6 cut(s) 346, 589, 996, 1479, 1849, 1921
ArsI GACNNNNNNTTYG 2 cut(s) 2084, 2116
AspA2I CCTAGG 1 cut(s) 2567
AspLEI GCGC 3 cut(s) 232, 1497, 2641
AspS9I GGNCC 6 cut(s) 299, 1588, 2456, 2513, 2618, 2666
AsuC2I CCSGG 2 cut(s) 62, 2475
AsuHPI GGTGA 5 cut(s) 1130, 1223, 1413, 2186, 2556
AsuII TTCGAA 1 cut(s) 587
AvaII GGWCC 2 cut(s) 2513, 2666
AvrII CCTAGG 1 cut(s) 2567
AxyI CCTNAGG 1 cut(s) 2508
BaeGI GKGCMC 5 cut(s) 113, 290, 1302, 2428, 2659
BaeI ACNNNNGTAYC 4 cut(s) 689, 722, 1757, 1790
BanI GGYRCC 3 cut(s) 982, 2306, 2656
BarI GAAGNNNNNNTAC 2 cut(s) 1881, 1913
BbsI GAAGAC 1 cut(s) 65
Bbv12I GWGCWC 5 cut(s) 113, 155, 290, 2428, 2683
BbvCI CCTCAGC 3 cut(s) 1347, 1530, 1728
BccI CCATC 6 cut(s) 170, 868, 1024, 1195, 1797, 2254
BcgI CGANNNNNNTGC 2 cut(s) 2415, 2449
BciVI GTATCC 2 cut(s) 687, 1785
BcnI CCSGG 2 cut(s) 62, 2475
BcoDI GTCTC 4 cut(s) 540, 1149, 1638, 1659
BfaI CTAG 4 cut(s) 2073, 2301, 2568, 2688
BfmI CTRYAG 4 cut(s) 354, 1161, 1941, 2349
BfoI RGCGCY 2 cut(s) 233, 1498
BfuAI ACCTGC 3 cut(s) 819, 1270, 1909
BfuI GTATCC 2 cut(s) 687, 1785
BlnI CCTAGG 1 cut(s) 2567
BmcAI AGTACT 4 cut(s) 53, 665, 716, 2143
Bme18I GGWCC 2 cut(s) 2513, 2666
BmgT120I GGNCC 6 cut(s) 299, 1588, 2456, 2513, 2618, 2666
BmiI GGNNCC 8 cut(s) 300, 549, 915, 984, 2308, 2320, 2514, 2658
BmrI ACTGGG 1 cut(s) 1850
BmsI GCATC 6 cut(s) 190, 397, 1695, 2287, 2367, 2600
BmuI ACTGGG 1 cut(s) 1850
BoxI GACNNNNGTC 2 cut(s) 143, 947
BpiI GAAGAC 1 cut(s) 65
BpmI CTGGAG 4 cut(s) 597, 1434, 1475, 2393
Bpu10I CCTNAGC 3 cut(s) 1347, 1530, 1728
Bpu14I TTCGAA 1 cut(s) 587
BpuEI CTTGAG 4 cut(s) 585, 855, 1032, 1275
BpuMI CCSGG 2 cut(s) 62, 2475
BsaHI GRCGYC 1 cut(s) 533
BsaWI WCCGGW 1 cut(s) 2065
BsaXI ACNNNNNCTCC 4 cut(s) 532, 562, 807, 837
Bsc4I CCNNNNNNNGG 9 cut(s) 176, 779, 1174, 1715, 2213, 2453, 2480, 2651, 2675
Bse1I ACTGG 8 cut(s) 637, 1168, 1210, 1244, 1451, 1511, 1630, 1845
Bse21I CCTNAGG 1 cut(s) 2508
Bse3DI GCAATG 3 cut(s) 95, 262, 1509
BseAI TCCGGA 1 cut(s) 2065
BseGI GGATG 3 cut(s) 30, 2085, 2647
BseLI CCNNNNNNNGG 9 cut(s) 176, 779, 1174, 1715, 2213, 2453, 2480, 2651, 2675
BseMI GCAATG 3 cut(s) 95, 262, 1509
BseNI ACTGG 8 cut(s) 637, 1168, 1210, 1244, 1451, 1511, 1630, 1845
BseRI GAGGAG 3 cut(s) 1767, 2327, 2634
BseSI GKGCMC 5 cut(s) 113, 290, 1302, 2428, 2659
BseYI CCCAGC 2 cut(s) 1113, 2207
BsgI GTGCAG 3 cut(s) 419, 449, 1422
BshFI GGCC 7 cut(s) 301, 1590, 1876, 2419, 2458, 2506, 2620
BshNI GGYRCC 3 cut(s) 982, 2306, 2656
BsiHKAI GWGCWC 5 cut(s) 113, 155, 290, 2428, 2683
BsiSI CCGG 3 cut(s) 62, 2066, 2474
BslFI GGGAC 6 cut(s) 796, 1096, 1156, 1566, 1707, 2526
BslI CCNNNNNNNGG 9 cut(s) 176, 779, 1174, 1715, 2213, 2453, 2480, 2651, 2675
BsmAI GTCTC 4 cut(s) 540, 1149, 1638, 1659
BsmBI CGTCTC 3 cut(s) 540, 1149, 1659
BsmFI GGGAC 6 cut(s) 796, 1096, 1156, 1566, 1707, 2526
BsmI GAATGC 1 cut(s) 1162
BsnI GGCC 7 cut(s) 301, 1590, 1876, 2419, 2458, 2506, 2620
Bsp119I TTCGAA 1 cut(s) 587
Bsp1286I GDGCHC 7 cut(s) 113, 155, 290, 1302, 2428, 2659, 2683
Bsp13I TCCGGA 1 cut(s) 2065
Bsp143I GATC 2 cut(s) 688, 2278
BspACI CCGC 5 cut(s) 44, 800, 821, 1869, 2370
BspANI GGCC 7 cut(s) 301, 1590, 1876, 2419, 2458, 2506, 2620
BspEI TCCGGA 1 cut(s) 2065
BspLI GGNNCC 8 cut(s) 300, 549, 915, 984, 2308, 2320, 2514, 2658
BspMI ACCTGC 3 cut(s) 819, 1270, 1909
BspPI GGATC 2 cut(s) 683, 2286
BspT104I TTCGAA 1 cut(s) 587
BspT107I GGYRCC 3 cut(s) 982, 2306, 2656
BsrBI CCGCTC 1 cut(s) 823
BsrDI GCAATG 3 cut(s) 95, 262, 1509
BsrI ACTGG 8 cut(s) 637, 1168, 1210, 1244, 1451, 1511, 1630, 1845
BssMI GATC 2 cut(s) 688, 2278
BssNI GRCGYC 1 cut(s) 533
BssT1I CCWWGG 1 cut(s) 2567
Bst6I CTCTTC 1 cut(s) 2121
BstACI GRCGYC 1 cut(s) 533
BstAPI GCANNNNNTGC 2 cut(s) 760, 2597
BstBI TTCGAA 1 cut(s) 587
BstENI CCTNNNNNAGG 2 cut(s) 2451, 2649
BstF5I GGATG 3 cut(s) 30, 2085, 2647
BstH2I RGCGCY 2 cut(s) 233, 1498
BstHHI GCGC 3 cut(s) 232, 1497, 2641
BstKTI GATC 2 cut(s) 691, 2281
BstMAI GTCTC 4 cut(s) 540, 1149, 1638, 1659
BstMBI GATC 2 cut(s) 688, 2278
BstNSI RCATGY 2 cut(s) 1666, 2525
BstPAI GACNNNNGTC 2 cut(s) 143, 947
BstSFI CTRYAG 4 cut(s) 354, 1161, 1941, 2349
BstSLI GKGCMC 5 cut(s) 113, 290, 1302, 2428, 2659
BstV2I GAAGAC 1 cut(s) 65
Bsu36I CCTNAGG 1 cut(s) 2508
BsuI GTATCC 2 cut(s) 687, 1785
BsuRI GGCC 7 cut(s) 301, 1590, 1876, 2419, 2458, 2506, 2620
BtsCI GGATG 3 cut(s) 30, 2085, 2647
BtsI GCAGTG 1 cut(s) 2218
BtsIMutI CAGTG 5 cut(s) 113, 534, 644, 1251, 2218
BveI ACCTGC 3 cut(s) 819, 1270, 1909
CaiI CAGNNNCTG 1 cut(s) 476
CfoI GCGC 3 cut(s) 232, 1497, 2641
Cfr13I GGNCC 6 cut(s) 299, 1588, 2456, 2513, 2618, 2666
Csp6I GTAC 8 cut(s) 52, 525, 664, 715, 1272, 1721, 2142, 2360
CspCI CAANNNNNGTGG 4 cut(s) 352, 387, 1671, 1706
CviQI GTAC 8 cut(s) 52, 525, 664, 715, 1272, 1721, 2142, 2360
DpnI GATC 2 cut(s) 690, 2280
DpnII GATC 2 cut(s) 688, 2278
Eam1104I CTCTTC 1 cut(s) 2121
EarI CTCTTC 1 cut(s) 2121
Eco130I CCWWGG 1 cut(s) 2567
Eco147I AGGCCT 1 cut(s) 2506
Eco47I GGWCC 2 cut(s) 2513, 2666
Eco47III AGCGCT 1 cut(s) 231
Eco57I CTGAAG 6 cut(s) 453, 953, 2043, 2208, 2325, 2436
Eco81I CCTNAGG 1 cut(s) 2508
EcoNI CCTNNNNNAGG 2 cut(s) 2451, 2649
EcoO109I RGGNCCY 3 cut(s) 299, 2456, 2513
EcoRI GAATTC 2 cut(s) 589, 1479
EcoT14I CCWWGG 1 cut(s) 2567
ErhI CCWWGG 1 cut(s) 2567
Esp3I CGTCTC 3 cut(s) 540, 1149, 1659
FalI AAGNNNNNCTT 2 cut(s) 2247, 2279
FaqI GGGAC 6 cut(s) 796, 1096, 1156, 1566, 1707, 2526
FauI CCCGC 1 cut(s) 37
FauNDI CATATG 1 cut(s) 1735
FblI GTMKAC 1 cut(s) 81
FokI GGATG 3 cut(s) 17, 2092, 2634
FspBI CTAG 4 cut(s) 2073, 2301, 2568, 2688
GlaI GCGC 3 cut(s) 231, 1496, 2640
GsaI CCCAGC 2 cut(s) 1117, 2211
GsuI CTGGAG 4 cut(s) 597, 1434, 1475, 2393
HaeII RGCGCY 2 cut(s) 233, 1498
HaeIII GGCC 7 cut(s) 301, 1590, 1876, 2419, 2458, 2506, 2620
HapII CCGG 3 cut(s) 62, 2066, 2474
HhaI GCGC 3 cut(s) 232, 1497, 2641
Hin1I GRCGYC 1 cut(s) 533
Hin6I GCGC 3 cut(s) 230, 1495, 2639
HinP1I GCGC 3 cut(s) 230, 1495, 2639
HpaII CCGG 3 cut(s) 62, 2066, 2474
HphI GGTGA 5 cut(s) 1130, 1223, 1413, 2186, 2556
Hpy166II GTNNAC 8 cut(s) 82, 111, 288, 1456, 1721, 2177, 2426, 2669
Hpy188III TCNNGA 6 cut(s) 148, 461, 1476, 1854, 2066, 2481
Hpy8I GTNNAC 8 cut(s) 82, 111, 288, 1456, 1721, 2177, 2426, 2669
Hpy99I CGWCG 1 cut(s) 149
HpyAV CCTTC 8 cut(s) 1244, 1428, 2025, 2116, 2183, 2394, 2442, 2457
HpyCH4IV ACGT 5 cut(s) 144, 533, 1270, 1428, 1579
HpySE526I ACGT 5 cut(s) 144, 533, 1270, 1428, 1579
Hsp92I GRCGYC 1 cut(s) 533
HspAI GCGC 3 cut(s) 230, 1495, 2639
Kpn2I TCCGGA 1 cut(s) 2065
Kzo9I GATC 2 cut(s) 688, 2278
LweI GCATC 6 cut(s) 190, 397, 1695, 2287, 2367, 2600
MaeI CTAG 4 cut(s) 2073, 2301, 2568, 2688
MaeII ACGT 5 cut(s) 144, 533, 1270, 1428, 1579
MaeIII GTNAC 4 cut(s) 187, 529, 1896, 2436
MalI GATC 2 cut(s) 690, 2280
MbiI CCGCTC 1 cut(s) 823
MboI GATC 2 cut(s) 688, 2278
MboII GAAGA 7 cut(s) 65, 2010, 2036, 2138, 2264, 2331, 2442
MhlI GDGCHC 7 cut(s) 113, 155, 290, 1302, 2428, 2659, 2683
MlyI GAGTC 3 cut(s) 1324, 2078, 2108
MmeI TCCRAC 3 cut(s) 650, 1540, 1984
MroI TCCGGA 1 cut(s) 2065
MseI TTAA 2 cut(s) 1962, 2492
MslI CAYNNNNRTG 2 cut(s) 279, 1617
MspA1I CMGCKG 1 cut(s) 485
MspI CCGG 3 cut(s) 62, 2066, 2474
Mva1269I GAATGC 1 cut(s) 1162
NciI CCSGG 2 cut(s) 62, 2475
NdeI CATATG 1 cut(s) 1735
NdeII GATC 2 cut(s) 688, 2278
NlaIV GGNNCC 8 cut(s) 300, 549, 915, 984, 2308, 2320, 2514, 2658
NmuCI GTSAC 2 cut(s) 187, 529
NspI RCATGY 2 cut(s) 1666, 2525
NspV TTCGAA 1 cut(s) 587
OliI CACNNNNGTG 1 cut(s) 279
PaeI GCATGC 1 cut(s) 1666
PaqCI CACCTGC 1 cut(s) 1270
PasI CCCWGGG 1 cut(s) 1585
PceI AGGCCT 1 cut(s) 2506
PciI ACATGT 1 cut(s) 2521
PctI GAATGC 1 cut(s) 1162
PfeI GAWTC 8 cut(s) 218, 375, 584, 1126, 1336, 1952, 2062, 2153
PflMI CCANNNNNTGG 4 cut(s) 176, 779, 1715, 2675
PfoI TCCNGGA 1 cut(s) 679
PleI GAGTC 3 cut(s) 1324, 2077, 2107
PpsI GAGTC 3 cut(s) 1324, 2077, 2107
PpuMI RGGWCCY 1 cut(s) 2513
PscI ACATGT 1 cut(s) 2521
PshAI GACNNNNGTC 2 cut(s) 143, 947
PsiI TTATAA 1 cut(s) 2625
Psp1406I AACGTT 1 cut(s) 1428
Psp5II RGGWCCY 1 cut(s) 2513
PspFI CCCAGC 2 cut(s) 1113, 2207
PspN4I GGNNCC 8 cut(s) 300, 549, 915, 984, 2308, 2320, 2514, 2658
PspPI GGNCC 6 cut(s) 299, 1588, 2456, 2513, 2618, 2666
PspPPI RGGWCCY 1 cut(s) 2513
PsrI GAACNNNNNNTAC 2 cut(s) 1740, 1772
PstNI CAGNNNCTG 1 cut(s) 476
PvuII CAGCTG 1 cut(s) 485
RsaI GTAC 8 cut(s) 53, 526, 665, 716, 1273, 1722, 2143, 2361
RsaNI GTAC 8 cut(s) 52, 525, 664, 715, 1272, 1721, 2142, 2360
RseI CAYNNNNRTG 2 cut(s) 279, 1617
SaqAI TTAA 2 cut(s) 1962, 2492
Sau3AI GATC 2 cut(s) 688, 2278
Sau96I GGNCC 6 cut(s) 299, 1588, 2456, 2513, 2618, 2666
ScaI AGTACT 4 cut(s) 53, 665, 716, 2143
SchI GAGTC 3 cut(s) 1324, 2078, 2108
SduI GDGCHC 7 cut(s) 113, 155, 290, 1302, 2428, 2659, 2683
SfaNI GCATC 6 cut(s) 190, 397, 1695, 2287, 2367, 2600
SfcI CTRYAG 4 cut(s) 354, 1161, 1941, 2349
SfuI TTCGAA 1 cut(s) 587
SinI GGWCC 2 cut(s) 2513, 2666
SmiMI CAYNNNNRTG 2 cut(s) 279, 1617
SmlI CTYRAG 4 cut(s) 600, 870, 1047, 1290
SmoI CTYRAG 4 cut(s) 600, 870, 1047, 1290
SphI GCATGC 1 cut(s) 1666
SseBI AGGCCT 1 cut(s) 2506
SsiI CCGC 5 cut(s) 44, 800, 821, 1869, 2370
SspI AATATT 1 cut(s) 1538
SspMI CTAG 4 cut(s) 2073, 2301, 2568, 2688
StuI AGGCCT 1 cut(s) 2506
StyI CCWWGG 1 cut(s) 2567
TaiI ACGT 5 cut(s) 147, 536, 1273, 1431, 1582
TaqI TCGA 2 cut(s) 587, 1625
TatI WGTACW 6 cut(s) 51, 663, 714, 1720, 2141, 2359
TauI GCSGC 1 cut(s) 2373
TfiI GAWTC 8 cut(s) 218, 375, 584, 1126, 1336, 1952, 2062, 2153
Tru1I TTAA 2 cut(s) 1962, 2492
Tru9I TTAA 2 cut(s) 1962, 2492
TscAI CASTG 5 cut(s) 113, 534, 644, 1251, 2218
TseFI GTSAC 2 cut(s) 187, 529
Tsp45I GTSAC 2 cut(s) 187, 529
TspRI CASTG 5 cut(s) 113, 534, 644, 1251, 2218
Van91I CCANNNNNTGG 4 cut(s) 176, 779, 1715, 2675
VneI GTGCAC 3 cut(s) 109, 286, 2424
VpaK11BI GGWCC 2 cut(s) 2513, 2666
XagI CCTNNNNNAGG 2 cut(s) 2451, 2649
XapI RAATTY 6 cut(s) 346, 589, 996, 1479, 1849, 1921
XceI RCATGY 2 cut(s) 1666, 2525
XcmI CCANNNNNNNNNTGG 1 cut(s) 677
XmaJI CCTAGG 1 cut(s) 2567
XmiI GTMKAC 1 cut(s) 81
XspI CTAG 4 cut(s) 2073, 2301, 2568, 2688
ZraI GACGTC 1 cut(s) 534
ZrmI AGTACT 4 cut(s) 53, 665, 716, 2143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.