Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0004789

Physical Location & Seq

Genomic Coordinates Reverse (-)

18201113 .. 18209506

Gene Structure 8394 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g17080.17

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3159 bp

ATGCCGGTTTGGAACTTCTGCAATTTTTTTATTCTGAAGGAAAGCTTGGCTTTTATGTTTGAGATGGCTCATCTTCATGAAGATTCTTTACGTGAATATGATGAGCTAGAAATTTGTTATTTGGAAACAGTTGAAATGAATGGAATATGGAAGGACTTTGGAGGAGTTGACCATGGTGATGATCAGGCAGCATTGCTCAATTCTGGAAACAAATCATTGACACAAATTGTTCAAGATGACTCATTTAGAGAATTTGAATTTAGACAGTATCTGTTTGCCTGCCAATCAAAGCTTTTATTCAAGCTGAATCGCCCGTTTGAAGTAGCATCAAGGGGATACTCATTCATTATAAGCTTCTCAAAGTCTCTGGCTGTACATGAGAGTATTCTACCATTTTGTATGCGTGAAGTTTGGGTGATAACGGCGTGCATGTCCTTAGTCAATGAAACTGATTCACATTATAAGGAAGGACTTGCAGCACCTGATATAGAAAAGGAATTCTACCGCCTTCAAGGTGACCTTTATTCACTATGCAGGGTTAAGTTCATGAGGCTTGCATATTTAATCGGATATGGGACGAATATAGAAAGGAGTCCTGGAAATAGTGCTTCACTCAGCATGCTTCCCTGGCCCAAGCCTGCAGTTTGGCCCACAGTTCCAGCAGATGCTTCATCTGAGGTGCTGGCAAAAGAAAAGATGATTCTACAGTCAACTCCATCAGTAAAGCACTTTGGTATTCAGAGAAAACCATTGCCTCTTGAACCTTCTCTACTATTACGCGAGGCTAATCGGAGGAGAGCTTCCCTTTCTGCTGGGAATATGGTTGAAATGTTTGATGGCCGCCAAAATTTTAGTGACGGTTCAGGTTCAGATGTGTCATTTAAGATGCCATCATTACAAAAAGTGCAAACAAGTGTTATGTCACGTACTAACTCTTCACCAGGAATTTCTGAGAGCTCAATTGATCGATCTATGAGGCTTGCTGAAATTTATGTTGCTGCTGAATATGCTCTGCACAATACAGTTTCTAATCCTAATCTGTTGAAGTCTTTGTCATCTACAGAGGAGTTTGAGCAAAAATATCTTGAACTAACTAAAGGCGCTGCTGACAATTATCATCGATCCTGGTGGAAAAGACATGGAGTTGTTCTTGATGGAGAAATAGCATCTGTCTTTTTTAAGCACGGAAACTTTGATCTGGCAGCAAAGTCATATGAAAAGGTTTGTGCACTTTACTCTGGTGAAGGATGGCAGGTTTTATTGGCAGAAGTCCTCCCCAATTTAGCAGAGTGTCAGAAAATACTCAATGATCAAGCTGGCTATCTATCATCTTGTGTGAGATTGCTTTCATTGGATAAAGGCTTGTTTTTGACAAAGGAACGCCAAGATTTTCAGTCAGAGGTGGTTCGTCTTGCACATGGCGAAATGGAGCAACCGGTGCCGCTAGATGTGTCATCTTTAATTACATTTTCTGGCAATCCTGGGCCTCCATTAGAATTATGTGATGGAGATTCTGGTACTCTATCAGTAACATTTTGGAGTGGCTTTCCTGATGATATAACTCTTGATTCACTAAGTCTCACTTTGAATGCAATATTTAATACTGATGAGGTTGCTAAGGCATTAATGAGCTCTACTGCAATTGTATTAAAGCCTGGTCGGAATAGCATTACCCTGGATTTACCCCCACAGAAACCAGGTTCATATGTTTTGGGGGTTCTCACTGGGCAAATTGGGCAATTAAGATTCAGATCTCATAGCTTTTCCAAGGGTGGCCCTGAAGACAGTGTGGATTTCATGAGTTATGAAAAGCCTCCTAGACCTATCTTGAAGGTATTCAAACCAAGACCTCTGGTTGATCTTGTTGCAGCTGTTTCCTCTGGTTTGCTGATAAATGAACCTCAGTGGGTAGGCATTATTGTAAGACCCATTAACTACTCTCTCAAAGGTGCTGTCTTGTATGTTGATACTGGACCTGGTCTTAAAATTGAAGATTCACATTTCATTGAGATGGAGAGCTATGCTGATGCATCAAAGAGTTCAGTTGGTGTGACCGACTGCAATGATACTCTAAAGGATGGTTCTTTGGCTGTTGATAAAAGTTTTGAGAAGTTGACTCTGTGTGATGATAGAGTAGAGTTTCCACATTGGGCAAGCAATTCAACGTCTATTTTATGGATTCCAGTTCGTGCTATCAGTGAAAAGCTTACAGTAGGATCATCTTCAGTGGTTCCCCAGAGACAGAGCATTGTGGATGGAATGAGGATGATAGCACTCAAACTTGAATTTGGTGTATCTCACAATCAGATATTTGAGAGGACCCTAGCTGTGCATTTTACCGATCCTTTCCATGTGAGCACGCGAGTAACAGATAAATGCAATGATGATACTTTGCTTCTGCAGGTCATTCTACATTCTGAAGTGAAGGCCACAGTGACCATCTTTGATGCTTGGCTTGATCTTCAAGATGGGTTTGTTAATACCGGACAAGGTGATGGGAGACCAACTTCAGCCTACTTTCCACTAGTAGTTTCTCCAAATTCTAAAGCAGCAATGCTATTCAGTATATGCTTAGCGAAGCCTAATGTTGAAGATGAAGCTAAGGCTCTTCAGTCGAATAGTATACTAAATATTAGATATGAAATTTCTGGTGATAGAAACAGTGGAGCACACCCACCTGTGTCTGCAGAATCTTCTGGGTCTGAGGGTGCTAGGCAGGACTTAATTTTCAGAAGCACTCTTGCTTTACAAAGGCCTGTGCTTGATCCAGTCCTGGCTGTTGGTTTTCTTACTCTCTCTTCTGGTGGCCTTAGGGTTGGCCAGCCAGTTACCATGAAATGGAGGGTTGAAAGATTGAAGGATTTTGAGGGAAATGAAGTTTCTCCTAACAATGATGAGGTGTTATATGAAGTCGGTGCAAATACTGAGAATTGGATGATTGCTGGGAGGAAAAGAGGGCATGTTTCTCTCTCTGCAAAGCAAGGTTCAAGGATAGAACTCTCAATATTATGTGTGCCTCTAGTGGCGGGGTATGTTCGCCCCCCTCAACTTGGTCTGCCAGATGTTGGTGAATCGAATATAAGTTGCAGTCCTGCTGGGCCTCATCTGGTTTGTATCTTGCCGCCGGTTCTGAGCTCCTCCTTTTGTATTCCGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000278 GO:0000281 GO:0000910 GO:0000911 GO:0000919 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0006810 GO:0006891 GO:0007049 GO:0008150 GO:0009987 GO:0012505 GO:0016043 GO:0016192 GO:0016197 GO:0016482 GO:0022402 GO:0022607 GO:0030008 GO:0031410 GO:0031982 GO:0031984 GO:0032506 GO:0032991 GO:0034498 GO:0042147 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048193 GO:0051179 GO:0051234 GO:0051301 GO:0051641 GO:0051649 GO:0061640 GO:0071840 GO:0097708 GO:0098791 GO:0099023 GO:1902410 GO:1903047 GO:1990071

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Foie-gras_1 TRAPPC10

Protein Analysis

1053

Amino Acids

116.16

Weight (kDa)

5.43

Isoelectric Point (pI)

44.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004789)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54440 AT5G54440 AT5G54440
fragaria_vesca	FvH4_3g20750 FvH4_3g20750 FvH4_3g20750 FvH4_3g20750
malus_domestica	MD03G1222200.v1.1 MD11G1239600.v1.1
prunus_persica	Prupe.4G187500_v2.0.a1 Prupe.4G187500_v2.0.a1 Prupe.4G187500_v2.0.a1 Prupe.4G187500_v2.0.a1 Prupe.4G187500_v2.0.a1
pyrus_communis	pycom03g17080 pycom11g21130
rosa_chinensis	RchiOBHm_Chr5g0034971
rosa_laevigata	RLG00000033586 RLG00000033589
rosa_multiflora	Rmu_co8343959.1_g000001 Rmu_sc0000879.1_g000039 Rmu_sc0021290.1_g000001
rosa_roxburghii	Rroxscaffold_1G00045410
rosa_rugosa	Rorug05G0149100 Rorug05G0149200 Rorug05G0149300
rosa_samantha	Rh5AG242200 Rh5BG241800 Rh5CG273300 Rh5DG250400
rosa_wichuraiana	Rw5G022120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	350, 462
Acc36I	ACCTGC	2 cut(s)	1243, 2392
AccB1I	GGYRCC	1 cut(s)	1438
AccB7I	CCANNNNNTGG	2 cut(s)	2838, 3065
AccI	GTMKAC	1 cut(s)	2623
AccII	CGCG	2 cut(s)	780, 2362
AciI	CCGC	5 cut(s)	505, 841, 1442, 3026, 3122
AclWI	GGATC	4 cut(s)	1116, 2224, 2336, 2759
AcoI	YGGCCR	2 cut(s)	838, 2818
AcuI	CTGAAG	6 cut(s)	56, 1800, 2208, 2439, 2493, 2594
AfaI	GTAC	3 cut(s)	375, 928, 1519
AfiI	CCNNNNNNNGG	3 cut(s)	2838, 3050, 3065
AgeI	ACCGGT	1 cut(s)	1435
AhlI	ACTAGT	1 cut(s)	2524
AjuI	GAANNNNNNNTTGG	2 cut(s)	29, 61
Alw21I	GWGCWC	6 cut(s)	959, 1231, 1634, 2360, 2671, 3137
Alw26I	GTCTC	4 cut(s)	369, 1583, 2233, 2494
Alw44I	GTGCAC	1 cut(s)	1227
AlwI	GGATC	4 cut(s)	1116, 2224, 2336, 2759
AlwNI	CAGNNNCTG	2 cut(s)	271, 482
ApaLI	GTGCAC	1 cut(s)	1227
ApeKI	GCWGC	7 cut(s)	188, 476, 998, 1103, 1202, 1868, 2549
ArsI	GACNNNNNNTTYG	2 cut(s)	1938, 1970
AseI	ATTAAT	1 cut(s)	1625
AsiGI	ACCGGT	1 cut(s)	1435
Asp700I	GAANNNNTTC	1 cut(s)	1835
AspLEI	GCGC	1 cut(s)	1103
AspS9I	GGNCC	7 cut(s)	630, 648, 1484, 1775, 1973, 2319, 3098
AsuHPI	GGTGA	8 cut(s)	188, 427, 527, 930, 1253, 2504, 2663, 3080
AvaII	GGWCC	2 cut(s)	1973, 2319
AxyI	CCTNAGG	1 cut(s)	2810
BaeGI	GKGCMC	1 cut(s)	1231
BalI	TGGCCA	1 cut(s)	2820
BanI	GGYRCC	1 cut(s)	1438
BanII	GRGCYC	3 cut(s)	959, 1634, 3137
BarI	GAAGNNNNNNTAC	4 cut(s)	72, 104, 919, 951
BbsI	GAAGAC	1 cut(s)	1788
Bbv12I	GWGCWC	6 cut(s)	959, 1231, 1634, 2360, 2671, 3137
BbvI	GCAGC	7 cut(s)	200, 488, 985, 1090, 1214, 1880, 2561
BceAI	ACGGC	1 cut(s)	438
BciVI	GTATCC	1 cut(s)	329
BclI	TGATCA	2 cut(s)	181, 1309
BcoDI	GTCTC	4 cut(s)	369, 1583, 2233, 2494
BcuI	ACTAGT	1 cut(s)	2524
BfaI	CTAG	7 cut(s)	107, 1445, 1818, 2324, 2525, 2712, 3020
BfmI	CTRYAG	5 cut(s)	639, 704, 1059, 2399, 2685
BfoI	RGCGCY	1 cut(s)	1104
BfuAI	ACCTGC	2 cut(s)	1243, 2392
BfuI	GTATCC	1 cut(s)	329
BglII	AGATCT	1 cut(s)	1751
BlpI	GCTNAGC	1 cut(s)	2572
Bme18I	GGWCC	2 cut(s)	1973, 2319
BmgT120I	GGNCC	7 cut(s)	630, 648, 1484, 1775, 1973, 2319, 3098
BmiI	GGNNCC	3 cut(s)	1440, 2232, 2321
BmrI	ACTGGG	1 cut(s)	1734
BmsI	GCATC	7 cut(s)	335, 655, 876, 1175, 2017, 2039, 2437
BmuI	ACTGGG	1 cut(s)	1734
BpiI	GAAGAC	1 cut(s)	1788
Bpu10I	CCTNAGC	2 cut(s)	1617, 2601
Bpu1102I	GCTNAGC	1 cut(s)	2572
Bsa29I	ATCGAT	2 cut(s)	967, 1120
BsaAI	YACGTR	2 cut(s)	92, 926
BsaBI	GATNNNNATC	1 cut(s)	1750
BsaI	GGTCTC	1 cut(s)	2494
BsaJI	CCNNGG	5 cut(s)	172, 626, 1481, 1674, 1767
BsaWI	WCCGGW	2 cut(s)	1435, 2483
Bsc4I	CCNNNNNNNGG	3 cut(s)	2838, 3050, 3065
Bse118I	RCCGGY	3 cut(s)	4, 1435, 3124
Bse1I	ACTGG	5 cut(s)	1729, 1975, 2183, 2768, 2825
Bse21I	CCTNAGG	1 cut(s)	2810
Bse3DI	GCAATG	5 cut(s)	191, 749, 2068, 2386, 2559
Bse8I	GATNNNNATC	1 cut(s)	1750
BseCI	ATCGAT	2 cut(s)	967, 1120
BseDI	CCNNGG	5 cut(s)	172, 626, 1481, 1674, 1767
BseGI	GGATG	5 cut(s)	1253, 2083, 2260, 2271, 2940
BseJI	GATNNNNATC	1 cut(s)	1750
BseLI	CCNNNNNNNGG	3 cut(s)	2838, 3050, 3065
BseMI	GCAATG	5 cut(s)	191, 749, 2068, 2386, 2559
BseMII	CTCAG	7 cut(s)	628, 666, 942, 1916, 2694, 2916, 3122
BseNI	ACTGG	5 cut(s)	1729, 1975, 2183, 2768, 2825
BseRI	GAGGAG	4 cut(s)	177, 808, 1079, 3127
BseSI	GKGCMC	1 cut(s)	1231
BseXI	GCAGC	7 cut(s)	200, 488, 985, 1090, 1214, 1880, 2561
BseYI	CCCAGC	3 cut(s)	812, 2942, 3095
BsgI	GTGCAG	1 cut(s)	998
Bsh1236I	CGCG	2 cut(s)	780, 2362
BshNI	GGYRCC	1 cut(s)	1438
BshTI	ACCGGT	1 cut(s)	1435
BshVI	ATCGAT	2 cut(s)	967, 1120
BsiHKAI	GWGCWC	6 cut(s)	959, 1231, 1634, 2360, 2671, 3137
BsiSI	CCGG	5 cut(s)	5, 1436, 2484, 3125, 3152
BslFI	GGGAC	1 cut(s)	589
BslI	CCNNNNNNNGG	3 cut(s)	2838, 3050, 3065
BsmAI	GTCTC	4 cut(s)	369, 1583, 2233, 2494
BsmFI	GGGAC	1 cut(s)	589
BsmI	GAATGC	1 cut(s)	1594
Bso31I	GGTCTC	1 cut(s)	2494
Bsp1286I	GDGCHC	6 cut(s)	959, 1231, 1634, 2360, 2671, 3137
Bsp1407I	TGTACA	1 cut(s)	373
Bsp1720I	GCTNAGC	1 cut(s)	2572
Bsp19I	CCATGG	1 cut(s)	172
BspACI	CCGC	5 cut(s)	505, 841, 1442, 3026, 3122
BspCNI	CTCAG	7 cut(s)	627, 667, 943, 1915, 2695, 2917, 3123
BspDI	ATCGAT	2 cut(s)	967, 1120
BspFNI	CGCG	2 cut(s)	780, 2362
BspHI	TCATGA	3 cut(s)	76, 546, 1797
BspLI	GGNNCC	3 cut(s)	1440, 2232, 2321
BspMAI	CTGCAG	3 cut(s)	643, 2403, 2689
BspMI	ACCTGC	2 cut(s)	1243, 2392
BspPI	GGATC	4 cut(s)	1116, 2224, 2336, 2759
BspQI	GCTCTTC	1 cut(s)	2613
BspT107I	GGYRCC	1 cut(s)	1438
BspTNI	GGTCTC	1 cut(s)	2494
BsrDI	GCAATG	5 cut(s)	191, 749, 2068, 2386, 2559
BsrFI	RCCGGY	3 cut(s)	4, 1435, 3124
BsrGI	TGTACA	1 cut(s)	373
BsrI	ACTGG	5 cut(s)	1729, 1975, 2183, 2768, 2825
BssAI	RCCGGY	3 cut(s)	4, 1435, 3124
BssECI	CCNNGG	5 cut(s)	172, 626, 1481, 1674, 1767
BssNAI	GTATAC	1 cut(s)	2624
BssT1I	CCWWGG	2 cut(s)	172, 1767
Bst1107I	GTATAC	1 cut(s)	2624
Bst6I	CTCTTC	3 cut(s)	940, 2613, 2803
BstAPI	GCANNNNNTGC	1 cut(s)	1438
BstAUI	TGTACA	1 cut(s)	373
BstBAI	YACGTR	2 cut(s)	92, 926
BstDSI	CCRYGG	1 cut(s)	172
BstEII	GGTNACC	1 cut(s)	515
BstF5I	GGATG	5 cut(s)	1253, 2083, 2260, 2271, 2940
BstFNI	CGCG	2 cut(s)	780, 2362
BstH2I	RGCGCY	1 cut(s)	1104
BstHHI	GCGC	1 cut(s)	1103
BstMAI	GTCTC	4 cut(s)	369, 1583, 2233, 2494
BstMWI	GCNNNNNNNGC	4 cut(s)	628, 1007, 1438, 1735
BstNSI	RCATGY	3 cut(s)	433, 622, 2963
BstPI	GGTNACC	1 cut(s)	515
BstSFI	CTRYAG	5 cut(s)	639, 704, 1059, 2399, 2685
BstSLI	GKGCMC	1 cut(s)	1231
BstUI	CGCG	2 cut(s)	780, 2362
BstV1I	GCAGC	7 cut(s)	200, 488, 985, 1090, 1214, 1880, 2561
BstV2I	GAAGAC	1 cut(s)	1788
BstX2I	RGATCY	1 cut(s)	1751
BstYI	RGATCY	1 cut(s)	1751
BstZ17I	GTATAC	1 cut(s)	2624
Bsu15I	ATCGAT	2 cut(s)	967, 1120
Bsu36I	CCTNAGG	1 cut(s)	2810
BsuI	GTATCC	1 cut(s)	329
BsuTUI	ATCGAT	2 cut(s)	967, 1120
BtgI	CCRYGG	1 cut(s)	172
BtsCI	GGATG	5 cut(s)	1253, 2083, 2260, 2271, 2940
BtsIMutI	CAGTG	7 cut(s)	1722, 1792, 1910, 2203, 2232, 2439, 2668
BveI	ACCTGC	2 cut(s)	1243, 2392
CaiI	CAGNNNCTG	2 cut(s)	271, 482
CciI	TCATGA	3 cut(s)	76, 546, 1797
CfoI	GCGC	1 cut(s)	1103
Cfr10I	RCCGGY	3 cut(s)	4, 1435, 3124
Cfr13I	GGNCC	7 cut(s)	630, 648, 1484, 1775, 1973, 2319, 3098
ClaI	ATCGAT	2 cut(s)	967, 1120
CsiI	ACCWGGT	2 cut(s)	1696, 1975
Csp6I	GTAC	3 cut(s)	374, 927, 1518
CspAI	ACCGGT	1 cut(s)	1435
CviQI	GTAC	3 cut(s)	374, 927, 1518
EaeI	YGGCCR	2 cut(s)	838, 2818
Eam1104I	CTCTTC	3 cut(s)	940, 2613, 2803
EarI	CTCTTC	3 cut(s)	940, 2613, 2803
Ecl136II	GAGCTC	3 cut(s)	957, 1632, 3135
Eco130I	CCWWGG	2 cut(s)	172, 1767
Eco147I	AGGCCT	1 cut(s)	2755
Eco24I	GRGCYC	3 cut(s)	959, 1634, 3137
Eco31I	GGTCTC	1 cut(s)	2494
Eco47I	GGWCC	2 cut(s)	1973, 2319
Eco53kI	GAGCTC	3 cut(s)	957, 1632, 3135
Eco57I	CTGAAG	6 cut(s)	56, 1800, 2208, 2439, 2493, 2594
Eco81I	CCTNAGG	1 cut(s)	2810
Eco91I	GGTNACC	1 cut(s)	515
EcoICRI	GAGCTC	3 cut(s)	957, 1632, 3135
EcoO109I	RGGNCCY	1 cut(s)	2319
EcoO65I	GGTNACC	1 cut(s)	515
EcoRI	GAATTC	1 cut(s)	497
EcoT14I	CCWWGG	2 cut(s)	172, 1767
EcoT22I	ATGCAT	1 cut(s)	2032
EcoT38I	GRGCYC	3 cut(s)	959, 1634, 3137
ErhI	CCWWGG	2 cut(s)	172, 1767
FalI	AAGNNNNNCTT	8 cut(s)	29, 61, 34, 66, 504, 536, 1567, 1599
FaqI	GGGAC	1 cut(s)	589
FauI	CCCGC	1 cut(s)	3019
FauNDI	CATATG	2 cut(s)	1213, 1705
FbaI	TGATCA	2 cut(s)	181, 1309
FblI	GTMKAC	1 cut(s)	2623
FokI	GGATG	5 cut(s)	1260, 2090, 2267, 2278, 2947
FriOI	GRGCYC	3 cut(s)	959, 1634, 3137
FspBI	CTAG	7 cut(s)	107, 1445, 1818, 2324, 2525, 2712, 3020
GlaI	GCGC	1 cut(s)	1102
GsaI	CCCAGC	3 cut(s)	816, 2946, 3099
HaeII	RGCGCY	1 cut(s)	1104
HapII	CCGG	5 cut(s)	5, 1436, 2484, 3125, 3152
HhaI	GCGC	1 cut(s)	1103
Hin6I	GCGC	1 cut(s)	1101
HinP1I	GCGC	1 cut(s)	1101
HincII	GTYRAC	3 cut(s)	169, 711, 2115
HindII	GTYRAC	3 cut(s)	169, 711, 2115
HindIII	AAGCTT	4 cut(s)	43, 290, 352, 2204
HpaII	CCGG	5 cut(s)	5, 1436, 2484, 3125, 3152
HphI	GGTGA	8 cut(s)	188, 427, 527, 930, 1253, 2504, 2663, 3080
Hpy166II	GTNNAC	5 cut(s)	169, 711, 1229, 2115, 2624
Hpy8I	GTNNAC	5 cut(s)	169, 711, 1229, 2115, 2624
HpyAV	CCTTC	9 cut(s)	31, 145, 461, 518, 774, 1238, 1825, 2419, 2851
HpyCH4IV	ACGT	3 cut(s)	91, 925, 2165
HpyF10VI	GCNNNNNNNGC	4 cut(s)	628, 1007, 1438, 1735
HpySE526I	ACGT	3 cut(s)	91, 925, 2165
HspAI	GCGC	1 cut(s)	1101
Ksp22I	TGATCA	2 cut(s)	181, 1309
LguI	GCTCTTC	1 cut(s)	2613
LmnI	GCTCC	3 cut(s)	1429, 2666, 3140
Lsp1109I	GCAGC	7 cut(s)	200, 488, 985, 1090, 1214, 1880, 2561
LweI	GCATC	7 cut(s)	335, 655, 876, 1175, 2017, 2039, 2437
MabI	ACCWGGT	2 cut(s)	1696, 1975
MaeI	CTAG	7 cut(s)	107, 1445, 1818, 2324, 2525, 2712, 3020
MaeII	ACGT	3 cut(s)	91, 925, 2165
MaeIII	GTNAC	8 cut(s)	515, 854, 921, 1528, 2050, 2365, 2434, 2827
MfeI	CAATTG	2 cut(s)	960, 1641
MflI	RGATCY	1 cut(s)	1751
MhlI	GDGCHC	6 cut(s)	959, 1231, 1634, 2360, 2671, 3137
MlsI	TGGCCA	1 cut(s)	2820
MluNI	TGGCCA	1 cut(s)	2820
MlyI	GAGTC	3 cut(s)	233, 601, 2110
MmeI	TCCRAC	1 cut(s)	1640
Mox20I	TGGCCA	1 cut(s)	2820
Mph1103I	ATGCAT	1 cut(s)	2032
MroXI	GAANNNNTTC	1 cut(s)	1835
MscI	TGGCCA	1 cut(s)	2820
MslI	CAYNNNNRTG	3 cut(s)	75, 177, 2009
Msp20I	TGGCCA	1 cut(s)	2820
MspA1I	CMGCKG	1 cut(s)	1871
MspI	CCGG	5 cut(s)	5, 1436, 2484, 3125, 3152
MunI	CAATTG	2 cut(s)	960, 1641
Mva1269I	GAATGC	1 cut(s)	1594
MvnI	CGCG	2 cut(s)	780, 2362
MwoI	GCNNNNNNNGC	4 cut(s)	628, 1007, 1438, 1735
NcoI	CCATGG	1 cut(s)	172
NdeI	CATATG	2 cut(s)	1213, 1705
NlaIV	GGNNCC	3 cut(s)	1440, 2232, 2321
NmuCI	GTSAC	5 cut(s)	515, 854, 921, 2050, 2434
NsiI	ATGCAT	1 cut(s)	2032
NspI	RCATGY	3 cut(s)	433, 622, 2963
PaeI	GCATGC	1 cut(s)	622
PagI	TCATGA	3 cut(s)	76, 546, 1797
PceI	AGGCCT	1 cut(s)	2755
PciSI	GCTCTTC	1 cut(s)	2613
PctI	GAATGC	1 cut(s)	1594
PdmI	GAANNNNTTC	1 cut(s)	1835
PflFI	GACNNNGTC	1 cut(s)	1977
PflMI	CCANNNNNTGG	2 cut(s)	2838, 3065
PfoI	TCCNGGA	1 cut(s)	595
PinAI	ACCGGT	1 cut(s)	1435
PleI	GAGTC	3 cut(s)	233, 600, 2110
PpsI	GAGTC	3 cut(s)	233, 600, 2110
Ppu21I	YACGTR	2 cut(s)	92, 926
PpuMI	RGGWCCY	1 cut(s)	2319
PshBI	ATTAAT	1 cut(s)	1625
PsiI	TTATAA	2 cut(s)	350, 462
Psp124BI	GAGCTC	3 cut(s)	959, 1634, 3137
Psp5II	RGGWCCY	1 cut(s)	2319
PspEI	GGTNACC	1 cut(s)	515
PspFI	CCCAGC	3 cut(s)	812, 2942, 3095
PspN4I	GGNNCC	3 cut(s)	1440, 2232, 2321
PspPI	GGNCC	7 cut(s)	630, 648, 1484, 1775, 1973, 2319, 3098
PspPPI	RGGWCCY	1 cut(s)	2319
PsrI	GAACNNNNNNTAC	2 cut(s)	753, 785
PstI	CTGCAG	3 cut(s)	643, 2403, 2689
PstNI	CAGNNNCTG	2 cut(s)	271, 482
PsuI	RGATCY	1 cut(s)	1751
PsyI	GACNNNGTC	1 cut(s)	1977
PvuII	CAGCTG	1 cut(s)	1871
RsaI	GTAC	3 cut(s)	375, 928, 1519
RsaNI	GTAC	3 cut(s)	374, 927, 1518
RseI	CAYNNNNRTG	3 cut(s)	75, 177, 2009
SacI	GAGCTC	3 cut(s)	959, 1634, 3137
SapI	GCTCTTC	1 cut(s)	2613
Sau96I	GGNCC	7 cut(s)	630, 648, 1484, 1775, 1973, 2319, 3098
SchI	GAGTC	3 cut(s)	233, 601, 2110
SduI	GDGCHC	6 cut(s)	959, 1231, 1634, 2360, 2671, 3137
SexAI	ACCWGGT	2 cut(s)	1696, 1975
SfaNI	GCATC	7 cut(s)	335, 655, 876, 1175, 2017, 2039, 2437
SfcI	CTRYAG	5 cut(s)	639, 704, 1059, 2399, 2685
SinI	GGWCC	2 cut(s)	1973, 2319
SmiMI	CAYNNNNRTG	3 cut(s)	75, 177, 2009
SpeI	ACTAGT	1 cut(s)	2524
SphI	GCATGC	1 cut(s)	622
SseBI	AGGCCT	1 cut(s)	2755
SsiI	CCGC	5 cut(s)	505, 841, 1442, 3026, 3122
SspI	AATATT	3 cut(s)	1596, 2632, 3006
SspMI	CTAG	7 cut(s)	107, 1445, 1818, 2324, 2525, 2712, 3020
SstI	GAGCTC	3 cut(s)	959, 1634, 3137
StuI	AGGCCT	1 cut(s)	2755
StyI	CCWWGG	2 cut(s)	172, 1767
TaiI	ACGT	3 cut(s)	94, 928, 2168
TaqI	TCGA	4 cut(s)	967, 1120, 2615, 3074
TaqII	GACCGA	1 cut(s)	2069
TatI	WGTACW	1 cut(s)	373
TauI	GCSGC	3 cut(s)	843, 1444, 3124
TscAI	CASTG	7 cut(s)	1729, 1792, 1910, 2203, 2232, 2439, 2668
TseFI	GTSAC	5 cut(s)	515, 854, 921, 2050, 2434
TseI	GCWGC	7 cut(s)	188, 476, 998, 1103, 1202, 1868, 2549
Tsp45I	GTSAC	5 cut(s)	515, 854, 921, 2050, 2434
TspGWI	ACGGA	1 cut(s)	1200
TspRI	CASTG	7 cut(s)	1729, 1792, 1910, 2203, 2232, 2439, 2668
Tth111I	GACNNNGTC	1 cut(s)	1977
Van91I	CCANNNNNTGG	2 cut(s)	2838, 3065
VneI	GTGCAC	1 cut(s)	1227
VpaK11BI	GGWCC	2 cut(s)	1973, 2319
VspI	ATTAAT	1 cut(s)	1625
XceI	RCATGY	3 cut(s)	433, 622, 2963
XmiI	GTMKAC	1 cut(s)	2623
XmnI	GAANNNNTTC	1 cut(s)	1835
XspI	CTAG	7 cut(s)	107, 1445, 1818, 2324, 2525, 2712, 3020
Zsp2I	ATGCAT	1 cut(s)	2032

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.