Rh5AG242200

trafficking protein particle complex

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
29538818 .. 29553671
14854 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG242200.1

Sequence Viewer

Length: 3711 bp
ATGGCCAACTATCTCGCTCAGTTCCAGACCATCAAGAATTCACTCGATCATCTCGTTATTGCTGTTGAAGATGTTAGTGATTTGTGGCCTACTGTCAAGAAGGGATTTGAGGAGCACTTGCCTTTCAAAAGAGCTTGTTTAAATAACAAGACCCGTAATCCTGTGTTTGTGGAGAATTTCCGTGCTGAATTCATATTAACAACAGATGCAAGACTTCGCAGCCGATTCCCACAGGAGCAGTCGTTGTTTTGGTTTCGGGAGCCATATGCAACTGCGGTCCTCGTCACCTGTGAGGATCTTGATGAATTCAAGTCCATTCTCAAACCACGGCTAAAACTAATTGTCCAAAATGATGAACGGGAATGGTTTATTGTTTTTGTATCCAAGGCACATCCAAACAATGATCAAGCCACCAAATTGGCAAATAAAGTATATGCCAAACTTGAAGTTGATTTTAGCTCCAAGAAGAGAGAAAGGTGCTGCAAATTCGACCTATATAGTGCTGAAGAAACCTTTTGGGAAGACTTGGAATCCAAGATAATGGAGTGCATCAGAAATACATTGGATAGACGTGCACAGTTTTATGAGGATGAGATACGCAAGCTCAGTGAACAACGCTTCATGCCAGTTTGGAATTTCTGCAACTTTTTTATTTTGAAGGAAAGCTTGGCTTTTATGTTTGAGATGGCTCATCTTTATGAAGATTCACTACGTGAATATGATGAGCTAGAAATTTGTTATTTGGAAACAGTTGAAATGACCGGAAAACGGAGGGACTTTGGTGGAGTTGACCACGGTGATGATCAAGCATCATTGCTTAATTCTGGAAACAAACCATTGACACAAATTGTTCAAGATGACTCATTTAGGGAATTCGAATTTAGACAGTATCTGTTTGCCTGTCAATCAAAGCTATTATTCAAGCTGAATCGCCCCTATGAGGTTGCGTCAAGGGGATACTCATTCATTATAAGCTTTTCAAAGGCGCTGGCTGTACATGAGAATAGCCTACCTTTTTGTATGCGTGAAGTTTGGGTTATAACAGCTTGCATGTCCGTAGTCCATGCAACTGCTTCACATTATAAGGAAGGACTTGCAGCAGCTGATATAGAAAAGGAGTTCTACCGCCTTCAAGGTGATCTTTACTCACTATGCAGGGTCAAGTTCATGAGGCTTGCGTATATAATTGGATATGGCACAAATATGGAAAGAAGTCCTGGAAACAGTGCTTCACTCAGCATGCTACCTTGGCCCAAGCCAGCAATTTGGCCTTCAGTTCCACCTGATGCTTCTTCTGAGGTGCTAGCAAAAGAAAAGATAATTCTACAGGCAACTCCAGCTACCAAGCACTTTGGTATTCAAAGAAAACCATTGCCTCTTGAACCTTCTGTACTACTGCGTGAGGCGAATCGGAGGAGAGCTTCTCTCTCTGCTGGAAATATGTTTGAAATGCTTGATGGCCACCAAGCTTTGACTGATGGTTCAGGTTCGGATGCATCAATTAAGATGCCCTCATTACAAAAAGTACAAGCAAGTGTTATGTCGCGTACAAACTCTTCGCCAGGAATGTTTGAGGGCTCAATTGATCGGCCCATGAGACTTGCAGAGATTTATGTTGCAGCTGAACATGCTCTGCAGAGTACAATTTCTAATACTGATCTATGGAAGTCTTTGTCATCTACAGAGGAGTTTGAGCAAAAATATTTGGAGCTGACTAAGGGTGCTGCGGACAATTACCATCGATCCTGGTGGAAAAGGCATGGAGTTGTCCTTGATGGAGAAATAGCAGCAGTCTTGTTTAAGCATGGAAACTTTGATCTAGCTGTAAAGTCATATGAAAAGGTCTGTGCTCTTTATGCGGGTGAAGGATGGCAAGATTTGTTGGCAGAAGTCCTGCCCAACTTAGCAGAGTGTCAGAAGACACTCAATGACCAAGCTGGCTATCTATCTTCTTGCGTGAGGCTTCTTTCATTGGATAAAGGCTTGTTTTTAACCAAAGAACGCCAGGCTTTTCAGTCTGAGGTTGTTCATCTTGCACATGCTGAAATGAAGCAACCTGTGCCACTGGATGTATCATCATTAATTACATTCTCTGGTAATCCTGGGCCTCCGTTAGAATTATGTGATGGGGATCCTGGTACTCTATCTGTGACATTTTGGAGTGGCTTTCCTGATGACATAACTCTTGATTCCCTAAATCTCACATTGAATGCAATTTTCAATACTGATGAGGTTGCTAAGGCACTATGGAGCTCTACTGCTATTGTATTAAAGCCTGGTCGGAATACCGTTGCTCTAGATTTACCACCCCAAAAACCAGGTTCATATGTTTTGGGGGTTCTTACCGGGCAGATTGGGCAGTTAAGATTCAGGTCTCATAGCTTTTCCAAAGGAGGCCCTGAAGACAGCGAGGATTTTATGAGTTATGAAAAGCCTCCTAGGCCAGTTTTAAAGGTTTCCAAAGCGCGACCTCTTGTTGATCTTGCTGCAGCTATTTCAACTGCCCTGCTTATAAATGAAACTCAATGGGTTGGGATTATAGTAAGGCCCATTAACTACTCCCTCAAAGGTGCTGCCTTGTATGTTGATACTGGTCCTGGCCTTAAAATTGAAGAGTCACATTTCATTGAGATGGAGAGCTACAGTGATGAATCAAATAGTTCGGTTGAGCAGTTGGCTCTTTCTGGTGATAGAGTAGAGTTTCCAGATTGGGCAAGTAATTTGCCTTCTATTGTATGGATTCCAATTCGTGCTATCAGCGAAACACTTGCAAGAGGATCATCTTCAGTGGCTCCCCAAAGACAGATCAATTTGGATGGAATGAGGACAATAGCACTAAAACTTGAATTTGGAGCATCTCACAATCAGATTTTTGAGAGGACCCTAGCTGTGCATTTTACCGATCCTTTCCATGTGAGCACACGAGTTGCAGATAAATGCAATGATGGAACTTTGCTTCTACAGGTGATTTTACACTCTGAAGTGAAAGCCACATTGACAATTTATGATGCTTGGCTTGATCTTCAAGATGGATTTGTTAATACTGGACAAAGTGATGGGAGACCAACTTCTGCCTACTTTCCACTCGTTGTTTCTCCAAATTCTAGAGCAGGAATATTATTCAGTATATGCTTAGGGAAGACAAATTCTGAAGATGAAGCTAAGGTTGTTCAATCAGATAGTATACTAAATATTAGATATGGAATTTCTGGTGATAGAACAGCTGGAGCGCACCCACCTGTGGCTTTTGGGCCTGAGGGTGCTGGACAGGATCTGATTTTCAGGAGTGCTCTTGTTTTGCAAAGGCCTGTGCTTGATCCAGTCCTGGCTGTTGGTTTTCTTCCTCTCCCTTCTAGTGGCCTTAGGGTTGGCCAGCTAGTTACCATGAAATGGAGGGTTGAAAGATTAAAGGATTTTGAAGAGAATGAACTTTCCCATAACAATGATGAGGTGTTATATGAAGTCAATGCAAACACTGAAAGTTGGATGGTTGCTGGGAGGAAAAGAGGGCATGTCTCTCTCTCTGCAAAGCAAGGTTCAAGGATAGAGATTTCAATACTATGTGTGCCTCTGGTGGCGGGATACGTTCGTCCCCCTCAACTTGGTTTGCCAAATGTTGATGAATCAAATATAAGTTGCAATCCTGCAGGGCCTCATTTGGTTTGTGTCTTGCCTCCAACTTTGAGTTCGTCTTTCTGCATTCCTGCATGA

Protein Analysis

1236

Amino Acids

138.24

Weight (kDa)

5.63

Isoelectric Point (pI)

43.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TRAPPC10_1st PF23036 17 - 316 2.3e-51 Trafficking protein particle complex subunit 10-like, N-terminal
TRAPPC10 PF12584 1120 - 1201 7.1e-11 Trafficking protein particle complex subunit 10, TRAPPC10
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 971, 1040, 1083, 2513
AccB7I CCANNNNNTGG 1 cut(s) 3390
AccI GTMKAC 1 cut(s) 3184
AccII CGCG 2 cut(s) 1546, 2467
AciI CCGC 5 cut(s) 275, 1126, 1727, 1859, 3578
AclWI GGATC 8 cut(s) 303, 1737, 2126, 2139, 2785, 2897, 3279, 3311
AcoI YGGCCR 3 cut(s) 3, 1459, 3370
AcuI CTGAAG 6 cut(s) 525, 1257, 2421, 2769, 3000, 3171
AdeI CACNNNGTG 1 cut(s) 713
AfaI GTAC 6 cut(s) 996, 1392, 1527, 1549, 1642, 2140
AfiI CCNNNNNNNGG 6 cut(s) 768, 940, 3241, 3356, 3390, 3602
AjiI CACGTC 1 cut(s) 572
AjuI GAANNNNNNNTTGG 4 cut(s) 650, 682, 3670, 3702
Alw21I GWGCWC 6 cut(s) 117, 577, 1852, 2255, 2921, 3292
Alw26I GTCTC 4 cut(s) 1591, 2379, 3055, 3520
Alw44I GTGCAC 1 cut(s) 573
AlwI GGATC 8 cut(s) 303, 1737, 2126, 2139, 2785, 2897, 3279, 3311
AlwNI CAGNNNCTG 3 cut(s) 892, 1103, 3274
ApaLI GTGCAC 1 cut(s) 573
AseI ATTAAT 1 cut(s) 2081
AspA2I CCTAGG 1 cut(s) 2438
AspLEI GCGC 3 cut(s) 988, 2467, 3232
AsuC2I CCSGG 1 cut(s) 2347
AsuHPI GGTGA 7 cut(s) 277, 809, 1148, 1874, 2699, 2977, 3224
AsuII TTCGAA 1 cut(s) 876
AsuNHI GCTAGC 1 cut(s) 1303
AvaII GGWCC 3 cut(s) 277, 2594, 2880
AvrII CCTAGG 1 cut(s) 2438
AxyI CCTNAGG 2 cut(s) 3255, 3362
BaeGI GKGCMC 1 cut(s) 577
BaeI ACNNNNGTAYC 2 cut(s) 3574, 3607
BalI TGGCCA 3 cut(s) 5, 1461, 3372
BamHI GGATCC 1 cut(s) 2131
BanII GRGCYC 2 cut(s) 1580, 2255
BarI GAAGNNNNNNTAC 6 cut(s) 693, 725, 1540, 1572, 2710, 2742
BauI CACGAG 1 cut(s) 2922
BbsI GAAGAC 4 cut(s) 528, 1925, 2409, 3146
Bbv12I GWGCWC 6 cut(s) 117, 577, 1852, 2255, 2921, 3292
BceAI ACGGC 1 cut(s) 344
BcgI CGANNNNNNTGC 2 cut(s) 2750, 2784
BciVI GTATCC 3 cut(s) 391, 950, 3575
BclI TGATCA 2 cut(s) 403, 802
BcnI CCSGG 1 cut(s) 2347
BcoDI GTCTC 4 cut(s) 1591, 2379, 3055, 3520
BfaI CTAG 9 cut(s) 728, 1304, 1820, 2297, 2439, 2885, 3105, 3354, 3377
BfmI CTRYAG 7 cut(s) 1325, 1634, 1680, 2487, 2641, 2960, 3645
BfoI RGCGCY 1 cut(s) 989
BfuI GTATCC 3 cut(s) 391, 950, 3575
BglI GCCNNNNNGGC 1 cut(s) 2440
BlnI CCTAGG 1 cut(s) 2438
Bme18I GGWCC 3 cut(s) 277, 2594, 2880
BmgBI CACGTC 1 cut(s) 572
BmiI GGNNCC 4 cut(s) 261, 2133, 2793, 2882
BmsI GCATC 9 cut(s) 196, 558, 818, 1276, 1483, 1497, 1505, 2864, 2998
BmtI GCTAGC 1 cut(s) 1307
BpiI GAAGAC 4 cut(s) 528, 1925, 2409, 3146
BplI GAGNNNNNCTC 4 cut(s) 1408, 1440, 1410, 1442
BpmI CTGGAG 2 cut(s) 1320, 3246
Bpu10I CCTNAGC 3 cut(s) 2238, 3133, 3162
Bpu14I TTCGAA 1 cut(s) 876
BpuMI CCSGG 1 cut(s) 2347
Bsa29I ATCGAT 1 cut(s) 1741
BsaAI YACGTR 1 cut(s) 713
BsaBI GATNNNNATC 1 cut(s) 2130
BsaI GGTCTC 2 cut(s) 2379, 3055
BsaJI CCNNGG 6 cut(s) 326, 384, 793, 1247, 2102, 2438
BsaWI WCCGGW 1 cut(s) 761
BsaXI ACNNNNNCTCC 2 cut(s) 227, 257
Bsc4I CCNNNNNNNGG 6 cut(s) 768, 940, 3241, 3356, 3390, 3602
Bse1I ACTGG 6 cut(s) 626, 2070, 2444, 2596, 3049, 3320
Bse21I CCTNAGG 2 cut(s) 3255, 3362
Bse3DI GCAATG 3 cut(s) 812, 1370, 2947
Bse8I GATNNNNATC 1 cut(s) 2130
BseCI ATCGAT 1 cut(s) 1741
BseDI CCNNGG 6 cut(s) 326, 384, 793, 1247, 2102, 2438
BseGI GGATG 7 cut(s) 391, 595, 1498, 1874, 2074, 2821, 3492
BseJI GATNNNNATC 1 cut(s) 2130
BseLI CCNNNNNNNGG 6 cut(s) 768, 940, 3241, 3356, 3390, 3602
BseMI GCAATG 3 cut(s) 812, 1370, 2947
BseMII CTCAG 6 cut(s) 32, 619, 1249, 1287, 2010, 3246
BseNI ACTGG 6 cut(s) 626, 2070, 2444, 2596, 3049, 3320
BseRI GAGGAG 3 cut(s) 125, 1429, 1700
BseSI GKGCMC 1 cut(s) 577
BseYI CCCAGC 1 cut(s) 3494
Bsh1236I CGCG 2 cut(s) 1546, 2467
BshVI ATCGAT 1 cut(s) 1741
BsiHKAI GWGCWC 6 cut(s) 117, 577, 1852, 2255, 2921, 3292
BsiSI CCGG 2 cut(s) 762, 2346
BslFI GGGAC 2 cut(s) 788, 3576
BslI CCNNNNNNNGG 6 cut(s) 768, 940, 3241, 3356, 3390, 3602
BsmAI GTCTC 4 cut(s) 1591, 2379, 3055, 3520
BsmFI GGGAC 2 cut(s) 788, 3576
BsmI GAATGC 2 cut(s) 2215, 3699
Bso31I GGTCTC 2 cut(s) 2379, 3055
Bsp119I TTCGAA 1 cut(s) 876
Bsp1286I GDGCHC 7 cut(s) 117, 577, 1580, 1852, 2255, 2921, 3292
Bsp1407I TGTACA 1 cut(s) 994
BspACI CCGC 5 cut(s) 275, 1126, 1727, 1859, 3578
BspCNI CTCAG 6 cut(s) 31, 618, 1248, 1288, 2011, 3247
BspDI ATCGAT 1 cut(s) 1741
BspFNI CGCG 2 cut(s) 1546, 2467
BspHI TCATGA 1 cut(s) 1167
BspLI GGNNCC 4 cut(s) 261, 2133, 2793, 2882
BspMAI CTGCAG 3 cut(s) 1638, 2491, 3649
BspOI GCTAGC 1 cut(s) 1307
BspPI GGATC 8 cut(s) 303, 1737, 2126, 2139, 2785, 2897, 3279, 3311
BspT104I TTCGAA 1 cut(s) 876
BspTNI GGTCTC 2 cut(s) 2379, 3055
BsrDI GCAATG 3 cut(s) 812, 1370, 2947
BsrGI TGTACA 1 cut(s) 994
BsrI ACTGG 6 cut(s) 626, 2070, 2444, 2596, 3049, 3320
BssECI CCNNGG 6 cut(s) 326, 384, 793, 1247, 2102, 2438
BssNAI GTATAC 1 cut(s) 3185
BssSI CACGAG 1 cut(s) 2922
BssT1I CCWWGG 3 cut(s) 384, 1247, 2438
Bst1107I GTATAC 1 cut(s) 3185
Bst2BI CACGAG 1 cut(s) 2922
Bst4CI ACNGT 8 cut(s) 94, 579, 751, 797, 888, 1226, 2290, 2645
Bst6I CTCTTC 4 cut(s) 461, 1561, 2607, 3414
BstAPI GCANNNNNTGC 1 cut(s) 2059
BstAUI TGTACA 1 cut(s) 994
BstBAI YACGTR 1 cut(s) 713
BstBI TTCGAA 1 cut(s) 876
BstC8I GCNNGC 9 cut(s) 602, 990, 1048, 1176, 1241, 1260, 1305, 1939, 3374
BstDSI CCRYGG 2 cut(s) 326, 793
BstF5I GGATG 7 cut(s) 391, 595, 1498, 1874, 2074, 2821, 3492
BstFNI CGCG 2 cut(s) 1546, 2467
BstH2I RGCGCY 1 cut(s) 989
BstHHI GCGC 3 cut(s) 988, 2467, 3232
BstMAI GTCTC 4 cut(s) 1591, 2379, 3055, 3520
BstMWI GCNNNNNNNGC 7 cut(s) 1249, 1337, 1628, 1856, 2059, 2356, 2440
BstNSI RCATGY 5 cut(s) 1054, 1243, 1631, 2042, 3515
BstSFI CTRYAG 7 cut(s) 1325, 1634, 1680, 2487, 2641, 2960, 3645
BstSLI GKGCMC 1 cut(s) 577
BstUI CGCG 2 cut(s) 1546, 2467
BstV2I GAAGAC 4 cut(s) 528, 1925, 2409, 3146
BstX2I RGATCY 3 cut(s) 295, 2131, 3271
BstXI CCANNNNNNTGG 3 cut(s) 418, 541, 1266
BstYI RGATCY 3 cut(s) 295, 2131, 3271
BstZ17I GTATAC 1 cut(s) 3185
Bsu15I ATCGAT 1 cut(s) 1741
Bsu36I CCTNAGG 2 cut(s) 3255, 3362
BsuI GTATCC 3 cut(s) 391, 950, 3575
BsuTUI ATCGAT 1 cut(s) 1741
BtgI CCRYGG 2 cut(s) 326, 793
BtrI CACGTC 1 cut(s) 572
BtsCI GGATG 7 cut(s) 391, 595, 1498, 1874, 2074, 2821, 3492
BtsIMutI CAGTG 6 cut(s) 613, 1231, 2063, 2650, 2793, 3474
Cac8I GCNNGC 9 cut(s) 602, 990, 1048, 1176, 1241, 1260, 1305, 1939, 3374
CaiI CAGNNNCTG 3 cut(s) 892, 1103, 3274
CciI TCATGA 1 cut(s) 1167
CfoI GCGC 3 cut(s) 988, 2467, 3232
ClaI ATCGAT 1 cut(s) 1741
CseI GACGC 1 cut(s) 936
CsiI ACCWGGT 1 cut(s) 2317
Csp6I GTAC 6 cut(s) 995, 1391, 1526, 1548, 1641, 2139
CviQI GTAC 6 cut(s) 995, 1391, 1526, 1548, 1641, 2139
DraI TTTAAA 2 cut(s) 141, 2451
DraIII CACNNNGTG 1 cut(s) 713
EaeI YGGCCR 3 cut(s) 3, 1459, 3370
Eam1104I CTCTTC 4 cut(s) 461, 1561, 2607, 3414
EarI CTCTTC 4 cut(s) 461, 1561, 2607, 3414
Ecl136II GAGCTC 1 cut(s) 2253
Eco130I CCWWGG 3 cut(s) 384, 1247, 2438
Eco147I AGGCCT 1 cut(s) 3307
Eco24I GRGCYC 2 cut(s) 1580, 2255
Eco31I GGTCTC 2 cut(s) 2379, 3055
Eco47I GGWCC 3 cut(s) 277, 2594, 2880
Eco53kI GAGCTC 1 cut(s) 2253
Eco57I CTGAAG 6 cut(s) 525, 1257, 2421, 2769, 3000, 3171
Eco81I CCTNAGG 2 cut(s) 3255, 3362
EcoICRI GAGCTC 1 cut(s) 2253
EcoO109I RGGNCCY 3 cut(s) 2396, 2880, 3650
EcoRI GAATTC 4 cut(s) 37, 188, 305, 872
EcoT14I CCWWGG 3 cut(s) 384, 1247, 2438
EcoT22I ATGCAT 1 cut(s) 1498
EcoT38I GRGCYC 2 cut(s) 1580, 2255
ErhI CCWWGG 3 cut(s) 384, 1247, 2438
FalI AAGNNNNNCTT 6 cut(s) 650, 682, 655, 687, 1125, 1157
FaqI GGGAC 2 cut(s) 788, 3576
FauI CCCGC 2 cut(s) 1852, 3571
FauNDI CATATG 3 cut(s) 265, 1834, 2326
FbaI TGATCA 2 cut(s) 403, 802
FblI GTMKAC 1 cut(s) 3184
FokI GGATG 7 cut(s) 378, 602, 1505, 1881, 2081, 2828, 3499
FriOI GRGCYC 2 cut(s) 1580, 2255
FspBI CTAG 9 cut(s) 728, 1304, 1820, 2297, 2439, 2885, 3105, 3354, 3377
GlaI GCGC 3 cut(s) 987, 2466, 3231
GsaI CCCAGC 1 cut(s) 3498
GsuI CTGGAG 2 cut(s) 1320, 3246
HaeII RGCGCY 1 cut(s) 989
HapII CCGG 2 cut(s) 762, 2346
HgaI GACGC 1 cut(s) 936
HhaI GCGC 3 cut(s) 988, 2467, 3232
Hin6I GCGC 3 cut(s) 986, 2465, 3230
HinP1I GCGC 3 cut(s) 986, 2465, 3230
HincII GTYRAC 1 cut(s) 790
HindII GTYRAC 1 cut(s) 790
HindIII AAGCTT 3 cut(s) 664, 973, 1467
HpaII CCGG 2 cut(s) 762, 2346
HphI GGTGA 7 cut(s) 277, 809, 1148, 1874, 2699, 2977, 3224
Hpy166II GTNNAC 4 cut(s) 575, 611, 790, 3185
Hpy8I GTNNAC 4 cut(s) 575, 611, 790, 3185
HpyAV CCTTC 9 cut(s) 94, 652, 1082, 1139, 1281, 1395, 1859, 2736, 3360
HpyCH4III ACNGT 8 cut(s) 94, 579, 751, 797, 888, 1226, 2290, 2645
HpyCH4IV ACGT 3 cut(s) 571, 712, 3585
HpyF10VI GCNNNNNNNGC 7 cut(s) 1249, 1337, 1628, 1856, 2059, 2356, 2440
HpySE526I ACGT 3 cut(s) 571, 712, 3585
HspAI GCGC 3 cut(s) 986, 2465, 3230
Ksp22I TGATCA 2 cut(s) 403, 802
LmnI GCTCC 9 cut(s) 112, 235, 259, 464, 1708, 2250, 2797, 2852, 3227
LweI GCATC 9 cut(s) 196, 558, 818, 1276, 1483, 1497, 1505, 2864, 2998
MabI ACCWGGT 1 cut(s) 2317
MaeI CTAG 9 cut(s) 728, 1304, 1820, 2297, 2439, 2885, 3105, 3354, 3377
MaeII ACGT 3 cut(s) 571, 712, 3585
MaeIII GTNAC 4 cut(s) 283, 2149, 2616, 3379
MfeI CAATTG 1 cut(s) 1581
MflI RGATCY 3 cut(s) 295, 2131, 3271
MhlI GDGCHC 7 cut(s) 117, 577, 1580, 1852, 2255, 2921, 3292
MlsI TGGCCA 3 cut(s) 5, 1461, 3372
MluNI TGGCCA 3 cut(s) 5, 1461, 3372
MlyI GAGTC 2 cut(s) 854, 2624
MmeI TCCRAC 3 cut(s) 2261, 3464, 3701
Mox20I TGGCCA 3 cut(s) 5, 1461, 3372
Mph1103I ATGCAT 1 cut(s) 1498
MscI TGGCCA 3 cut(s) 5, 1461, 3372
MslI CAYNNNNRTG 5 cut(s) 696, 798, 1202, 2630, 3441
Msp20I TGGCCA 3 cut(s) 5, 1461, 3372
MspA1I CMGCKG 3 cut(s) 1103, 1622, 3224
MspI CCGG 2 cut(s) 762, 2346
MunI CAATTG 1 cut(s) 1581
Mva1269I GAATGC 2 cut(s) 2215, 3699
MvnI CGCG 2 cut(s) 1546, 2467
MwoI GCNNNNNNNGC 7 cut(s) 1249, 1337, 1628, 1856, 2059, 2356, 2440
NciI CCSGG 1 cut(s) 2347
NdeI CATATG 3 cut(s) 265, 1834, 2326
NheI GCTAGC 1 cut(s) 1303
NlaIV GGNNCC 4 cut(s) 261, 2133, 2793, 2882
NmuCI GTSAC 3 cut(s) 283, 2149, 2616
NsiI ATGCAT 1 cut(s) 1498
NspI RCATGY 5 cut(s) 1054, 1243, 1631, 2042, 3515
NspV TTCGAA 1 cut(s) 876
PaeI GCATGC 1 cut(s) 1243
PagI TCATGA 1 cut(s) 1167
PceI AGGCCT 1 cut(s) 3307
PcsI WCGNNNNNNNCGW 1 cut(s) 51
PctI GAATGC 2 cut(s) 2215, 3699
PflMI CCANNNNNTGG 1 cut(s) 3390
PfoI TCCNGGA 1 cut(s) 1216
PleI GAGTC 2 cut(s) 854, 2623
PpsI GAGTC 2 cut(s) 854, 2623
Ppu21I YACGTR 1 cut(s) 713
PpuMI RGGWCCY 1 cut(s) 2880
PshBI ATTAAT 1 cut(s) 2081
PsiI TTATAA 4 cut(s) 971, 1040, 1083, 2513
Psp124BI GAGCTC 1 cut(s) 2255
Psp5II RGGWCCY 1 cut(s) 2880
PspFI CCCAGC 1 cut(s) 3494
PspN4I GGNNCC 4 cut(s) 261, 2133, 2793, 2882
PspPPI RGGWCCY 1 cut(s) 2880
PsrI GAACNNNNNNTAC 2 cut(s) 1374, 1406
PstI CTGCAG 3 cut(s) 1638, 2491, 3649
PstNI CAGNNNCTG 3 cut(s) 892, 1103, 3274
PsuI RGATCY 3 cut(s) 295, 2131, 3271
PvuII CAGCTG 3 cut(s) 1103, 1622, 3224
RsaI GTAC 6 cut(s) 996, 1392, 1527, 1549, 1642, 2140
RsaNI GTAC 6 cut(s) 995, 1391, 1526, 1548, 1641, 2139
RseI CAYNNNNRTG 5 cut(s) 696, 798, 1202, 2630, 3441
SacI GAGCTC 1 cut(s) 2255
SbfI CCTGCAGG 1 cut(s) 3649
SchI GAGTC 2 cut(s) 854, 2624
SdaI CCTGCAGG 1 cut(s) 3649
SduI GDGCHC 7 cut(s) 117, 577, 1580, 1852, 2255, 2921, 3292
SexAI ACCWGGT 1 cut(s) 2317
SfaNI GCATC 9 cut(s) 196, 558, 818, 1276, 1483, 1497, 1505, 2864, 2998
SfcI CTRYAG 7 cut(s) 1325, 1634, 1680, 2487, 2641, 2960, 3645
SfuI TTCGAA 1 cut(s) 876
SinI GGWCC 3 cut(s) 277, 2594, 2880
SmiMI CAYNNNNRTG 5 cut(s) 696, 798, 1202, 2630, 3441
SphI GCATGC 1 cut(s) 1243
Sse8387I CCTGCAGG 1 cut(s) 3649
SseBI AGGCCT 1 cut(s) 3307
SsiI CCGC 5 cut(s) 275, 1126, 1727, 1859, 3578
SspI AATATT 3 cut(s) 1703, 3117, 3193
SspMI CTAG 9 cut(s) 728, 1304, 1820, 2297, 2439, 2885, 3105, 3354, 3377
SstI GAGCTC 1 cut(s) 2255
StuI AGGCCT 1 cut(s) 3307
StyI CCWWGG 3 cut(s) 384, 1247, 2438
TaaI ACNGT 8 cut(s) 94, 579, 751, 797, 888, 1226, 2290, 2645
TaiI ACGT 3 cut(s) 574, 715, 3588
TaqI TCGA 4 cut(s) 45, 489, 876, 1741
TatI WGTACW 4 cut(s) 994, 1390, 1525, 1640
TscAI CASTG 6 cut(s) 613, 1231, 2070, 2650, 2793, 3481
TseFI GTSAC 3 cut(s) 283, 2149, 2616
Tsp45I GTSAC 3 cut(s) 283, 2149, 2616
TspGWI ACGGA 4 cut(s) 170, 784, 1045, 2100
TspRI CASTG 6 cut(s) 613, 1231, 2070, 2650, 2793, 3481
Van91I CCANNNNNTGG 1 cut(s) 3390
VneI GTGCAC 1 cut(s) 573
VpaK11BI GGWCC 3 cut(s) 277, 2594, 2880
VspI ATTAAT 1 cut(s) 2081
XbaI TCTAGA 2 cut(s) 2296, 3104
XceI RCATGY 5 cut(s) 1054, 1243, 1631, 2042, 3515
XmaJI CCTAGG 1 cut(s) 2438
XmiI GTMKAC 1 cut(s) 3184
XspI CTAG 9 cut(s) 728, 1304, 1820, 2297, 2439, 2885, 3105, 3354, 3377
Zsp2I ATGCAT 1 cut(s) 1498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.