LL-diaminopimelate aminotransferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G33680 |
| fragaria_vesca | FvH4_2g02700 FvH4_2g02700 |
| malus_domestica | MD00G1080600.v1.1 MD05G1111000.v1.1 MD10G1114500.v1.1 |
| prunus_persica | Prupe.8G156000_v2.0.a1 |
| pyrus_communis | pycom05g10690 pycom10g09890 pycom10g09900 |
| rosa_chinensis | RchiOBHm_Chr6g0247121 |
| rosa_laevigata | RLG00000015219 RLG00000030359 RLG00000030363 |
| rosa_multiflora | Rmu_sc0004577.1_g000011 Rmu_sc0030830.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00276080 Rroxscaffold_7G00214330 |
| rosa_rugosa | Rorug05G0522500 Rorug05G0522600 |
| rosa_samantha | Rh6AG037800 Rh6BG032400 Rh6BG032700 Rh6CG033500 Rh6DG031200 |
| rosa_wichuraiana | Rw6G003220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 329 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 178 |
| AccI | GTMKAC | 3 cut(s) | 365, 576, 813 |
| AciI | CCGC | 4 cut(s) | 48, 146, 508, 1012 |
| AclWI | GGATC | 1 cut(s) | 548 |
| AcoI | YGGCCR | 1 cut(s) | 1141 |
| AcsI | RAATTY | 1 cut(s) | 68 |
| AcuI | CTGAAG | 1 cut(s) | 497 |
| AfaI | GTAC | 6 cut(s) | 167, 266, 658, 780, 1024, 1100 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 189, 514, 668, 1125, 1203, 1208 |
| AflII | CTTAAG | 1 cut(s) | 1091 |
| AgsI | TTSAA | 7 cut(s) | 79, 209, 435, 869, 1009, 1033, 1294 |
| AjnI | CCWGG | 4 cut(s) | 174, 874, 1138, 1201 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 53, 85 |
| AluBI | AGCT | 8 cut(s) | 89, 212, 395, 422, 775, 1058, 1149, 1280 |
| AluI | AGCT | 8 cut(s) | 89, 212, 395, 422, 775, 1058, 1149, 1280 |
| Alw21I | GWGCWC | 1 cut(s) | 1134 |
| Alw26I | GTCTC | 1 cut(s) | 893 |
| Alw44I | GTGCAC | 1 cut(s) | 1130 |
| AlwI | GGATC | 1 cut(s) | 548 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 126 |
| AoxI | GGCC | 3 cut(s) | 595, 1087, 1141 |
| ApaLI | GTGCAC | 1 cut(s) | 1130 |
| ApeKI | GCWGC | 3 cut(s) | 248, 422, 749 |
| ApoI | RAATTY | 1 cut(s) | 68 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 671 |
| AspLEI | GCGC | 3 cut(s) | 491, 895, 1250 |
| AspS9I | GGNCC | 1 cut(s) | 595 |
| AsuC2I | CCSGG | 1 cut(s) | 184 |
| AsuHPI | GGTGA | 7 cut(s) | 311, 416, 717, 1071, 1186, 1238, 1250 |
| BaeGI | GKGCMC | 2 cut(s) | 355, 1134 |
| BanII | GRGCYC | 1 cut(s) | 315 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 149, 181 |
| BbsI | GAAGAC | 3 cut(s) | 33, 164, 1187 |
| Bbv12I | GWGCWC | 1 cut(s) | 1134 |
| BbvI | GCAGC | 3 cut(s) | 235, 409, 736 |
| BccI | CCATC | 4 cut(s) | 125, 479, 565, 977 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 118, 152 |
| BciT130I | CCWGG | 4 cut(s) | 176, 876, 1140, 1203 |
| BcnI | CCSGG | 1 cut(s) | 184 |
| BcoDI | GTCTC | 1 cut(s) | 893 |
| BfaI | CTAG | 2 cut(s) | 237, 371 |
| BfrI | CTTAAG | 1 cut(s) | 1091 |
| BisI | GCNGC | 3 cut(s) | 249, 423, 750 |
| BlsI | GCNGC | 3 cut(s) | 250, 424, 751 |
| Bme1390I | CCNGG | 5 cut(s) | 176, 184, 876, 1140, 1203 |
| BmgT120I | GGNCC | 1 cut(s) | 595 |
| BmiI | GGNNCC | 1 cut(s) | 880 |
| BmrFI | CCNGG | 5 cut(s) | 176, 184, 876, 1140, 1203 |
| BmsI | GCATC | 6 cut(s) | 9, 107, 132, 262, 1023, 1049 |
| BpiI | GAAGAC | 3 cut(s) | 33, 164, 1187 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 643, 675 |
| BpmI | CTGGAG | 1 cut(s) | 897 |
| Bpu10I | CCTNAGC | 1 cut(s) | 789 |
| BpuEI | CTTGAG | 3 cut(s) | 565, 917, 1196 |
| BpuMI | CCSGG | 1 cut(s) | 184 |
| BsaBI | GATNNNNATC | 1 cut(s) | 849 |
| BsaJI | CCNNGG | 7 cut(s) | 174, 289, 339, 451, 999, 1138, 1202 |
| BsaWI | WCCGGW | 1 cut(s) | 1260 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 189, 514, 668, 1125, 1203, 1208 |
| Bse1I | ACTGG | 2 cut(s) | 607, 745 |
| Bse8I | GATNNNNATC | 1 cut(s) | 849 |
| BseBI | CCWGG | 4 cut(s) | 176, 876, 1140, 1203 |
| BseDI | CCNNGG | 7 cut(s) | 174, 289, 339, 451, 999, 1138, 1202 |
| BseGI | GGATG | 2 cut(s) | 1040, 1162 |
| BseJI | GATNNNNATC | 1 cut(s) | 849 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 189, 514, 668, 1125, 1203, 1208 |
| BseMII | CTCAG | 2 cut(s) | 300, 654 |
| BseNI | ACTGG | 2 cut(s) | 607, 745 |
| BseSI | GKGCMC | 2 cut(s) | 355, 1134 |
| BseXI | GCAGC | 3 cut(s) | 235, 409, 736 |
| BseYI | CCCAGC | 1 cut(s) | 212 |
| BsgI | GTGCAG | 1 cut(s) | 234 |
| BshFI | GGCC | 3 cut(s) | 597, 1089, 1143 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1134 |
| BsiSI | CCGG | 3 cut(s) | 184, 566, 1261 |
| BslFI | GGGAC | 1 cut(s) | 166 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 189, 514, 668, 1125, 1203, 1208 |
| BsmAI | GTCTC | 1 cut(s) | 893 |
| BsmFI | GGGAC | 1 cut(s) | 166 |
| BsmI | GAATGC | 1 cut(s) | 1117 |
| BsnI | GGCC | 3 cut(s) | 597, 1089, 1143 |
| Bsp1286I | GDGCHC | 3 cut(s) | 315, 355, 1134 |
| Bsp143I | GATC | 2 cut(s) | 30, 553 |
| Bsp19I | CCATGG | 1 cut(s) | 339 |
| BspACI | CCGC | 4 cut(s) | 48, 146, 508, 1012 |
| BspANI | GGCC | 3 cut(s) | 597, 1089, 1143 |
| BspCNI | CTCAG | 2 cut(s) | 301, 655 |
| BspLI | GGNNCC | 1 cut(s) | 880 |
| BspPI | GGATC | 1 cut(s) | 548 |
| BspTI | CTTAAG | 1 cut(s) | 1091 |
| BsrI | ACTGG | 2 cut(s) | 607, 745 |
| BssECI | CCNNGG | 7 cut(s) | 174, 289, 339, 451, 999, 1138, 1202 |
| BssMI | GATC | 2 cut(s) | 30, 553 |
| BssNAI | GTATAC | 1 cut(s) | 814 |
| BssT1I | CCWWGG | 4 cut(s) | 289, 339, 451, 999 |
| Bst1107I | GTATAC | 1 cut(s) | 814 |
| Bst2UI | CCWGG | 4 cut(s) | 176, 876, 1140, 1203 |
| Bst4CI | ACNGT | 5 cut(s) | 383, 609, 694, 783, 955 |
| BstAFI | CTTAAG | 1 cut(s) | 1091 |
| BstC8I | GCNNGC | 3 cut(s) | 150, 1072, 1282 |
| BstDEI | CTNAG | 5 cut(s) | 309, 345, 416, 663, 789 |
| BstDSI | CCRYGG | 1 cut(s) | 339 |
| BstEII | GGTNACC | 2 cut(s) | 1192, 1256 |
| BstF5I | GGATG | 2 cut(s) | 1040, 1162 |
| BstHHI | GCGC | 3 cut(s) | 491, 895, 1250 |
| BstKTI | GATC | 2 cut(s) | 33, 556 |
| BstMAI | GTCTC | 1 cut(s) | 893 |
| BstMBI | GATC | 2 cut(s) | 30, 553 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 56, 95, 350, 428 |
| BstNI | CCWGG | 4 cut(s) | 176, 876, 1140, 1203 |
| BstNSI | RCATGY | 1 cut(s) | 359 |
| BstPI | GGTNACC | 2 cut(s) | 1192, 1256 |
| BstSCI | CCNGG | 5 cut(s) | 174, 182, 874, 1138, 1201 |
| BstSLI | GKGCMC | 2 cut(s) | 355, 1134 |
| BstV1I | GCAGC | 3 cut(s) | 235, 409, 736 |
| BstV2I | GAAGAC | 3 cut(s) | 33, 164, 1187 |
| BstX2I | RGATCY | 1 cut(s) | 553 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1061 |
| BstYI | RGATCY | 1 cut(s) | 553 |
| BstZ17I | GTATAC | 1 cut(s) | 814 |
| BsuRI | GGCC | 3 cut(s) | 597, 1089, 1143 |
| BtgI | CCRYGG | 1 cut(s) | 339 |
| BtgZI | GCGATG | 1 cut(s) | 84 |
| BtsCI | GGATG | 2 cut(s) | 1040, 1162 |
| BtsI | GCAGTG | 1 cut(s) | 552 |
| BtsIMutI | CAGTG | 3 cut(s) | 388, 552, 690 |
| Cac8I | GCNNGC | 3 cut(s) | 150, 1072, 1282 |
| CaiI | CAGNNNCTG | 1 cut(s) | 126 |
| CfoI | GCGC | 3 cut(s) | 491, 895, 1250 |
| Cfr13I | GGNCC | 1 cut(s) | 595 |
| CseI | GACGC | 1 cut(s) | 124 |
| Csp6I | GTAC | 6 cut(s) | 166, 265, 657, 779, 1023, 1099 |
| CviAII | CATG | 5 cut(s) | 340, 356, 832, 1152, 1187 |
| CviQI | GTAC | 6 cut(s) | 166, 265, 657, 779, 1023, 1099 |
| DdeI | CTNAG | 5 cut(s) | 309, 345, 416, 663, 789 |
| DpnI | GATC | 2 cut(s) | 32, 555 |
| DpnII | GATC | 2 cut(s) | 30, 553 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 178 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 178 |
| EaeI | YGGCCR | 1 cut(s) | 1141 |
| Eco130I | CCWWGG | 4 cut(s) | 289, 339, 451, 999 |
| Eco147I | AGGCCT | 1 cut(s) | 1089 |
| Eco24I | GRGCYC | 1 cut(s) | 315 |
| Eco32I | GATATC | 1 cut(s) | 709 |
| Eco57I | CTGAAG | 1 cut(s) | 497 |
| Eco91I | GGTNACC | 2 cut(s) | 1192, 1256 |
| EcoO65I | GGTNACC | 2 cut(s) | 1192, 1256 |
| EcoRII | CCWGG | 4 cut(s) | 174, 874, 1138, 1201 |
| EcoRV | GATATC | 1 cut(s) | 709 |
| EcoT14I | CCWWGG | 4 cut(s) | 289, 339, 451, 999 |
| EcoT22I | ATGCAT | 1 cut(s) | 100 |
| EcoT38I | GRGCYC | 1 cut(s) | 315 |
| ErhI | CCWWGG | 4 cut(s) | 289, 339, 451, 999 |
| FaeI | CATG | 5 cut(s) | 343, 359, 835, 1155, 1190 |
| FaqI | GGGAC | 1 cut(s) | 166 |
| FatI | CATG | 5 cut(s) | 339, 355, 831, 1151, 1186 |
| FauI | CCCGC | 1 cut(s) | 515 |
| FauNDI | CATATG | 1 cut(s) | 826 |
| FblI | GTMKAC | 3 cut(s) | 365, 576, 813 |
| Fnu4HI | GCNGC | 3 cut(s) | 249, 423, 750 |
| FokI | GGATG | 2 cut(s) | 1027, 1169 |
| FriOI | GRGCYC | 1 cut(s) | 315 |
| Fsp4HI | GCNGC | 3 cut(s) | 249, 423, 750 |
| FspBI | CTAG | 2 cut(s) | 237, 371 |
| GlaI | GCGC | 3 cut(s) | 490, 894, 1249 |
| GluI | GCNGC | 3 cut(s) | 249, 423, 750 |
| GsaI | CCCAGC | 1 cut(s) | 216 |
| GsuI | CTGGAG | 1 cut(s) | 897 |
| HaeIII | GGCC | 3 cut(s) | 597, 1089, 1143 |
| HapII | CCGG | 3 cut(s) | 184, 566, 1261 |
| HgaI | GACGC | 1 cut(s) | 124 |
| HhaI | GCGC | 3 cut(s) | 491, 895, 1250 |
| Hin1II | CATG | 5 cut(s) | 343, 359, 835, 1155, 1190 |
| Hin6I | GCGC | 3 cut(s) | 489, 893, 1248 |
| HinP1I | GCGC | 3 cut(s) | 489, 893, 1248 |
| HindIII | AAGCTT | 1 cut(s) | 1278 |
| HinfI | GANTC | 7 cut(s) | 578, 672, 818, 927, 987, 1171, 1183 |
| HpaII | CCGG | 3 cut(s) | 184, 566, 1261 |
| HphI | GGTGA | 7 cut(s) | 311, 416, 717, 1071, 1186, 1238, 1250 |
| Hpy166II | GTNNAC | 7 cut(s) | 366, 577, 657, 814, 951, 1099, 1132 |
| Hpy188I | TCNGA | 6 cut(s) | 484, 615, 635, 844, 982, 1217 |
| Hpy188III | TCNNGA | 6 cut(s) | 84, 227, 320, 662, 680, 1175 |
| Hpy8I | GTNNAC | 7 cut(s) | 366, 577, 657, 814, 951, 1099, 1132 |
| Hpy99I | CGWCG | 2 cut(s) | 40, 140 |
| HpyAV | CCTTC | 4 cut(s) | 237, 521, 1079, 1223 |
| HpyCH4III | ACNGT | 5 cut(s) | 383, 609, 694, 783, 955 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 56, 95, 350, 428 |
| HpyF3I | CTNAG | 5 cut(s) | 309, 345, 416, 663, 789 |
| Hsp92II | CATG | 5 cut(s) | 343, 359, 835, 1155, 1190 |
| HspAI | GCGC | 3 cut(s) | 489, 893, 1248 |
| Kzo9I | GATC | 2 cut(s) | 30, 553 |
| LmnI | GCTCC | 3 cut(s) | 392, 760, 878 |
| Lsp1109I | GCAGC | 3 cut(s) | 235, 409, 736 |
| LweI | GCATC | 6 cut(s) | 9, 107, 132, 262, 1023, 1049 |
| MaeI | CTAG | 2 cut(s) | 237, 371 |
| MaeIII | GTNAC | 6 cut(s) | 299, 377, 497, 535, 1192, 1256 |
| MalI | GATC | 2 cut(s) | 32, 555 |
| MboI | GATC | 2 cut(s) | 30, 553 |
| MboII | GAAGA | 7 cut(s) | 33, 46, 169, 252, 476, 1120, 1192 |
| MfeI | CAATTG | 1 cut(s) | 426 |
| MflI | RGATCY | 1 cut(s) | 553 |
| MhlI | GDGCHC | 3 cut(s) | 315, 355, 1134 |
| MluCI | AATT | 4 cut(s) | 68, 79, 426, 1298 |
| MlyI | GAGTC | 2 cut(s) | 572, 1177 |
| MnlI | CCTC | 9 cut(s) | 55, 223, 342, 343, 367, 454, 645, 880, 1097 |
| Mph1103I | ATGCAT | 1 cut(s) | 100 |
| MroXI | GAANNNNTTC | 1 cut(s) | 671 |
| MseI | TTAA | 1 cut(s) | 1092 |
| MslI | CAYNNNNRTG | 1 cut(s) | 836 |
| MspA1I | CMGCKG | 1 cut(s) | 775 |
| MspCI | CTTAAG | 1 cut(s) | 1091 |
| MspI | CCGG | 3 cut(s) | 184, 566, 1261 |
| MspR9I | CCNGG | 5 cut(s) | 176, 184, 876, 1140, 1203 |
| MunI | CAATTG | 1 cut(s) | 426 |
| Mva1269I | GAATGC | 1 cut(s) | 1117 |
| MvaI | CCWGG | 4 cut(s) | 176, 876, 1140, 1203 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 56, 95, 350, 428 |
| NciI | CCSGG | 1 cut(s) | 184 |
| NcoI | CCATGG | 1 cut(s) | 339 |
| NdeI | CATATG | 1 cut(s) | 826 |
| NdeII | GATC | 2 cut(s) | 30, 553 |
| NlaIII | CATG | 5 cut(s) | 343, 359, 835, 1155, 1190 |
| NlaIV | GGNNCC | 1 cut(s) | 880 |
| NmuCI | GTSAC | 5 cut(s) | 299, 497, 535, 1192, 1256 |
| NsiI | ATGCAT | 1 cut(s) | 100 |
| NspI | RCATGY | 1 cut(s) | 359 |
| PceI | AGGCCT | 1 cut(s) | 1089 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 35 |
| PctI | GAATGC | 1 cut(s) | 1117 |
| PdmI | GAANNNNTTC | 1 cut(s) | 671 |
| PfeI | GAWTC | 5 cut(s) | 672, 818, 927, 987, 1171 |
| PfoI | TCCNGGA | 1 cut(s) | 182 |
| PkrI | GCNGC | 3 cut(s) | 250, 424, 751 |
| PleI | GAGTC | 2 cut(s) | 572, 1177 |
| PpsI | GAGTC | 2 cut(s) | 572, 1177 |
| PsiI | TTATAA | 1 cut(s) | 329 |
| Psp6I | CCWGG | 4 cut(s) | 174, 874, 1138, 1201 |
| PspEI | GGTNACC | 2 cut(s) | 1192, 1256 |
| PspFI | CCCAGC | 1 cut(s) | 212 |
| PspGI | CCWGG | 4 cut(s) | 174, 874, 1138, 1201 |
| PspN4I | GGNNCC | 1 cut(s) | 880 |
| PspPI | GGNCC | 1 cut(s) | 595 |
| PstNI | CAGNNNCTG | 1 cut(s) | 126 |
| PsuI | RGATCY | 1 cut(s) | 553 |
| PvuII | CAGCTG | 1 cut(s) | 775 |
| RsaI | GTAC | 6 cut(s) | 167, 266, 658, 780, 1024, 1100 |
| RsaNI | GTAC | 6 cut(s) | 166, 265, 657, 779, 1023, 1099 |
| RseI | CAYNNNNRTG | 1 cut(s) | 836 |
| SaqAI | TTAA | 1 cut(s) | 1092 |
| SatI | GCNGC | 3 cut(s) | 249, 423, 750 |
| Sau3AI | GATC | 2 cut(s) | 30, 553 |
| Sau96I | GGNCC | 1 cut(s) | 595 |
| SchI | GAGTC | 2 cut(s) | 572, 1177 |
| ScrFI | CCNGG | 5 cut(s) | 176, 184, 876, 1140, 1203 |
| SduI | GDGCHC | 3 cut(s) | 315, 355, 1134 |
| SfaNI | GCATC | 6 cut(s) | 9, 107, 132, 262, 1023, 1049 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 836 |
| SmlI | CTYRAG | 4 cut(s) | 580, 896, 1091, 1175 |
| SmoI | CTYRAG | 4 cut(s) | 580, 896, 1091, 1175 |
| Sse9I | AATT | 4 cut(s) | 68, 79, 426, 1298 |
| SseBI | AGGCCT | 1 cut(s) | 1089 |
| SsiI | CCGC | 4 cut(s) | 48, 146, 508, 1012 |
| SspI | AATATT | 1 cut(s) | 640 |
| SspMI | CTAG | 2 cut(s) | 237, 371 |
| StuI | AGGCCT | 1 cut(s) | 1089 |
| StyD4I | CCNGG | 5 cut(s) | 174, 182, 874, 1138, 1201 |
| StyI | CCWWGG | 4 cut(s) | 289, 339, 451, 999 |
| TaaI | ACNGT | 5 cut(s) | 383, 609, 694, 783, 955 |
| TaqI | TCGA | 3 cut(s) | 29, 700, 860 |
| TaqII | GACCGA | 1 cut(s) | 176 |
| TasI | AATT | 4 cut(s) | 68, 79, 426, 1298 |
| TatI | WGTACW | 3 cut(s) | 165, 656, 1022 |
| TfiI | GAWTC | 5 cut(s) | 672, 818, 927, 987, 1171 |
| Tru1I | TTAA | 1 cut(s) | 1092 |
| Tru9I | TTAA | 1 cut(s) | 1092 |
| TscAI | CASTG | 3 cut(s) | 388, 552, 697 |
| TseFI | GTSAC | 5 cut(s) | 299, 497, 535, 1192, 1256 |
| TseI | GCWGC | 3 cut(s) | 248, 422, 749 |
| Tsp45I | GTSAC | 5 cut(s) | 299, 497, 535, 1192, 1256 |
| TspGWI | ACGGA | 1 cut(s) | 1116 |
| TspRI | CASTG | 3 cut(s) | 388, 552, 697 |
| Vha464I | CTTAAG | 1 cut(s) | 1091 |
| VneI | GTGCAC | 1 cut(s) | 1130 |
| XapI | RAATTY | 1 cut(s) | 68 |
| XceI | RCATGY | 1 cut(s) | 359 |
| XmiI | GTMKAC | 3 cut(s) | 365, 576, 813 |
| XmnI | GAANNNNTTC | 1 cut(s) | 671 |
| XspI | CTAG | 2 cut(s) | 237, 371 |
| Zsp2I | ATGCAT | 1 cut(s) | 100 |