LL-diaminopimelate aminotransferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G33680 |
| fragaria_vesca | FvH4_2g02700 FvH4_2g02700 |
| malus_domestica | MD00G1080600.v1.1 MD05G1111000.v1.1 MD10G1114500.v1.1 |
| prunus_persica | Prupe.8G156000_v2.0.a1 |
| pyrus_communis | pycom05g10690 pycom10g09890 pycom10g09900 |
| rosa_chinensis | RchiOBHm_Chr6g0247121 |
| rosa_laevigata | RLG00000015219 RLG00000030359 RLG00000030363 |
| rosa_multiflora | Rmu_sc0004577.1_g000011 Rmu_sc0030830.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00276080 Rroxscaffold_7G00214330 |
| rosa_rugosa | Rorug05G0522500 Rorug05G0522600 |
| rosa_samantha | Rh6AG037800 Rh6BG032400 Rh6BG032700 Rh6CG033500 Rh6DG031200 |
| rosa_wichuraiana | Rw6G003220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 249 |
| AccI | GTMKAC | 1 cut(s) | 573 |
| AccIII | TCCGGA | 1 cut(s) | 223 |
| AciI | CCGC | 6 cut(s) | 39, 58, 108, 123, 505, 1009 |
| AclWI | GGATC | 1 cut(s) | 545 |
| AcuI | CTGAAG | 1 cut(s) | 494 |
| AcyI | GRCGYC | 1 cut(s) | 126 |
| AdeI | CACNNNGTG | 1 cut(s) | 1105 |
| AfaI | GTAC | 5 cut(s) | 263, 608, 644, 655, 1021 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 398, 511, 665, 1283 |
| AflII | CTTAAG | 1 cut(s) | 1088 |
| AjnI | CCWGG | 3 cut(s) | 871, 1276, 1294 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 236, 268 |
| AluBI | AGCT | 6 cut(s) | 17, 202, 209, 878, 1055, 1224 |
| AluI | AGCT | 6 cut(s) | 17, 202, 209, 878, 1055, 1224 |
| Alw21I | GWGCWC | 1 cut(s) | 352 |
| Alw26I | GTCTC | 2 cut(s) | 890, 1139 |
| AlwI | GGATC | 1 cut(s) | 545 |
| Aor13HI | TCCGGA | 1 cut(s) | 223 |
| AoxI | GGCC | 1 cut(s) | 592 |
| ApeKI | GCWGC | 1 cut(s) | 746 |
| AseI | ATTAAT | 1 cut(s) | 1110 |
| AspLEI | GCGC | 2 cut(s) | 7, 250 |
| AspS9I | GGNCC | 4 cut(s) | 389, 592, 1204, 1292 |
| AsuC2I | CCSGG | 1 cut(s) | 1215 |
| AsuHPI | GGTGA | 5 cut(s) | 187, 308, 413, 714, 1313 |
| AvaII | GGWCC | 3 cut(s) | 389, 1204, 1292 |
| BanII | GRGCYC | 1 cut(s) | 312 |
| BauI | CACGAG | 1 cut(s) | 1225 |
| BbsI | GAAGAC | 2 cut(s) | 21, 1262 |
| Bbv12I | GWGCWC | 1 cut(s) | 352 |
| BbvI | GCAGC | 1 cut(s) | 733 |
| BccI | CCATC | 5 cut(s) | 125, 476, 562, 866, 974 |
| BceAI | ACGGC | 2 cut(s) | 86, 1117 |
| BciT130I | CCWGG | 3 cut(s) | 873, 1278, 1296 |
| BcnI | CCSGG | 1 cut(s) | 1215 |
| BcoDI | GTCTC | 2 cut(s) | 890, 1139 |
| BfaI | CTAG | 2 cut(s) | 234, 368 |
| BfoI | RGCGCY | 1 cut(s) | 8 |
| BfrI | CTTAAG | 1 cut(s) | 1088 |
| BisI | GCNGC | 3 cut(s) | 58, 124, 747 |
| BlsI | GCNGC | 3 cut(s) | 59, 125, 748 |
| Bme1390I | CCNGG | 4 cut(s) | 873, 1215, 1278, 1296 |
| Bme18I | GGWCC | 3 cut(s) | 389, 1204, 1292 |
| BmgT120I | GGNCC | 4 cut(s) | 389, 592, 1204, 1292 |
| BmiI | GGNNCC | 3 cut(s) | 391, 957, 1205 |
| BmrFI | CCNGG | 4 cut(s) | 873, 1215, 1278, 1296 |
| BmsI | GCATC | 2 cut(s) | 259, 1046 |
| BpiI | GAAGAC | 2 cut(s) | 21, 1262 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 640, 672 |
| BpmI | CTGGAG | 3 cut(s) | 67, 894, 951 |
| BpuEI | CTTGAG | 2 cut(s) | 562, 1271 |
| BpuMI | CCSGG | 1 cut(s) | 1215 |
| BsaBI | GATNNNNATC | 1 cut(s) | 846 |
| BsaHI | GRCGYC | 1 cut(s) | 126 |
| BsaJI | CCNNGG | 7 cut(s) | 286, 448, 786, 871, 996, 1159, 1213 |
| BsaWI | WCCGGW | 1 cut(s) | 223 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1174, 1204 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 398, 511, 665, 1283 |
| Bse1I | ACTGG | 2 cut(s) | 742, 934 |
| Bse3DI | GCAATG | 2 cut(s) | 190, 342 |
| Bse8I | GATNNNNATC | 1 cut(s) | 846 |
| BseAI | TCCGGA | 1 cut(s) | 223 |
| BseBI | CCWGG | 3 cut(s) | 873, 1278, 1296 |
| BseDI | CCNNGG | 7 cut(s) | 286, 448, 786, 871, 996, 1159, 1213 |
| BseGI | GGATG | 3 cut(s) | 985, 1037, 1237 |
| BseJI | GATNNNNATC | 1 cut(s) | 846 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 398, 511, 665, 1283 |
| BseMI | GCAATG | 2 cut(s) | 190, 342 |
| BseMII | CTCAG | 5 cut(s) | 65, 150, 185, 404, 1233 |
| BseNI | ACTGG | 2 cut(s) | 742, 934 |
| BseRI | GAGGAG | 1 cut(s) | 253 |
| BseXI | GCAGC | 1 cut(s) | 733 |
| BshFI | GGCC | 1 cut(s) | 594 |
| BsiHKAI | GWGCWC | 1 cut(s) | 352 |
| BsiSI | CCGG | 3 cut(s) | 224, 563, 1215 |
| BslFI | GGGAC | 2 cut(s) | 58, 1195 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 398, 511, 665, 1283 |
| BsmAI | GTCTC | 2 cut(s) | 890, 1139 |
| BsmFI | GGGAC | 2 cut(s) | 58, 1195 |
| BsmI | GAATGC | 2 cut(s) | 250, 1192 |
| BsnI | GGCC | 1 cut(s) | 594 |
| Bsp1286I | GDGCHC | 2 cut(s) | 312, 352 |
| Bsp13I | TCCGGA | 1 cut(s) | 223 |
| Bsp143I | GATC | 2 cut(s) | 550, 679 |
| BspACI | CCGC | 6 cut(s) | 39, 58, 108, 123, 505, 1009 |
| BspANI | GGCC | 1 cut(s) | 594 |
| BspCNI | CTCAG | 5 cut(s) | 64, 151, 184, 405, 1234 |
| BspEI | TCCGGA | 1 cut(s) | 223 |
| BspLI | GGNNCC | 3 cut(s) | 391, 957, 1205 |
| BspPI | GGATC | 1 cut(s) | 545 |
| BspTI | CTTAAG | 1 cut(s) | 1088 |
| BsrDI | GCAATG | 2 cut(s) | 190, 342 |
| BsrI | ACTGG | 2 cut(s) | 742, 934 |
| BssECI | CCNNGG | 7 cut(s) | 286, 448, 786, 871, 996, 1159, 1213 |
| BssMI | GATC | 2 cut(s) | 550, 679 |
| BssNI | GRCGYC | 1 cut(s) | 126 |
| BssSI | CACGAG | 1 cut(s) | 1225 |
| BssT1I | CCWWGG | 5 cut(s) | 286, 448, 786, 996, 1159 |
| Bst2BI | CACGAG | 1 cut(s) | 1225 |
| Bst2UI | CCWGG | 3 cut(s) | 873, 1278, 1296 |
| Bst4CI | ACNGT | 3 cut(s) | 380, 606, 952 |
| BstACI | GRCGYC | 1 cut(s) | 126 |
| BstAFI | CTTAAG | 1 cut(s) | 1088 |
| BstC8I | GCNNGC | 2 cut(s) | 1069, 1357 |
| BstDEI | CTNAG | 6 cut(s) | 8, 51, 159, 171, 413, 1242 |
| BstEII | GGTNACC | 1 cut(s) | 1267 |
| BstF5I | GGATG | 3 cut(s) | 985, 1037, 1237 |
| BstH2I | RGCGCY | 1 cut(s) | 8 |
| BstHHI | GCGC | 2 cut(s) | 7, 250 |
| BstKTI | GATC | 2 cut(s) | 553, 682 |
| BstMAI | GTCTC | 2 cut(s) | 890, 1139 |
| BstMBI | GATC | 2 cut(s) | 550, 679 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 107, 347 |
| BstNI | CCWGG | 3 cut(s) | 873, 1278, 1296 |
| BstNSI | RCATGY | 1 cut(s) | 1359 |
| BstPI | GGTNACC | 1 cut(s) | 1267 |
| BstSCI | CCNGG | 4 cut(s) | 871, 1213, 1276, 1294 |
| BstV1I | GCAGC | 1 cut(s) | 733 |
| BstV2I | GAAGAC | 2 cut(s) | 21, 1262 |
| BstX2I | RGATCY | 1 cut(s) | 550 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1058, 1200 |
| BstYI | RGATCY | 1 cut(s) | 550 |
| BsuRI | GGCC | 1 cut(s) | 594 |
| BtsCI | GGATG | 3 cut(s) | 985, 1037, 1237 |
| BtsI | GCAGTG | 1 cut(s) | 549 |
| BtsIMutI | CAGTG | 4 cut(s) | 385, 410, 549, 927 |
| Cac8I | GCNNGC | 2 cut(s) | 1069, 1357 |
| CfoI | GCGC | 2 cut(s) | 7, 250 |
| Cfr13I | GGNCC | 4 cut(s) | 389, 592, 1204, 1292 |
| CseI | GACGC | 3 cut(s) | 85, 115, 127 |
| CsiI | ACCWGGT | 1 cut(s) | 1294 |
| Csp6I | GTAC | 5 cut(s) | 262, 607, 643, 654, 1020 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1208, 1243 |
| CviAII | CATG | 6 cut(s) | 193, 358, 646, 829, 1262, 1356 |
| CviQI | GTAC | 5 cut(s) | 262, 607, 643, 654, 1020 |
| DdeI | CTNAG | 6 cut(s) | 8, 51, 159, 171, 413, 1242 |
| DpnI | GATC | 2 cut(s) | 552, 681 |
| DpnII | GATC | 2 cut(s) | 550, 679 |
| DraIII | CACNNNGTG | 1 cut(s) | 1105 |
| EciI | GGCGGA | 1 cut(s) | 28 |
| Eco130I | CCWWGG | 5 cut(s) | 286, 448, 786, 996, 1159 |
| Eco24I | GRGCYC | 1 cut(s) | 312 |
| Eco32I | GATATC | 1 cut(s) | 706 |
| Eco47I | GGWCC | 3 cut(s) | 389, 1204, 1292 |
| Eco57I | CTGAAG | 1 cut(s) | 494 |
| Eco91I | GGTNACC | 1 cut(s) | 1267 |
| EcoO65I | GGTNACC | 1 cut(s) | 1267 |
| EcoRII | CCWGG | 3 cut(s) | 871, 1276, 1294 |
| EcoRV | GATATC | 1 cut(s) | 706 |
| EcoT14I | CCWWGG | 5 cut(s) | 286, 448, 786, 996, 1159 |
| EcoT38I | GRGCYC | 1 cut(s) | 312 |
| ErhI | CCWWGG | 5 cut(s) | 286, 448, 786, 996, 1159 |
| FaeI | CATG | 6 cut(s) | 196, 361, 649, 832, 1265, 1359 |
| FaqI | GGGAC | 2 cut(s) | 58, 1195 |
| FatI | CATG | 6 cut(s) | 192, 357, 645, 828, 1261, 1355 |
| FauI | CCCGC | 2 cut(s) | 115, 512 |
| FauNDI | CATATG | 2 cut(s) | 823, 1195 |
| FblI | GTMKAC | 1 cut(s) | 573 |
| Fnu4HI | GCNGC | 3 cut(s) | 58, 124, 747 |
| FokI | GGATG | 3 cut(s) | 992, 1024, 1244 |
| FriOI | GRGCYC | 1 cut(s) | 312 |
| Fsp4HI | GCNGC | 3 cut(s) | 58, 124, 747 |
| FspAI | RTGCGCAY | 1 cut(s) | 249 |
| FspBI | CTAG | 2 cut(s) | 234, 368 |
| FspI | TGCGCA | 1 cut(s) | 249 |
| GlaI | GCGC | 2 cut(s) | 6, 249 |
| GluI | GCNGC | 3 cut(s) | 58, 124, 747 |
| GsuI | CTGGAG | 3 cut(s) | 67, 894, 951 |
| HaeII | RGCGCY | 1 cut(s) | 8 |
| HaeIII | GGCC | 1 cut(s) | 594 |
| HapII | CCGG | 3 cut(s) | 224, 563, 1215 |
| HgaI | GACGC | 3 cut(s) | 85, 115, 127 |
| HhaI | GCGC | 2 cut(s) | 7, 250 |
| Hin1I | GRCGYC | 1 cut(s) | 126 |
| Hin1II | CATG | 6 cut(s) | 196, 361, 649, 832, 1265, 1359 |
| Hin6I | GCGC | 2 cut(s) | 5, 248 |
| HinP1I | GCGC | 2 cut(s) | 5, 248 |
| HindIII | AAGCTT | 2 cut(s) | 15, 200 |
| HinfI | GANTC | 9 cut(s) | 10, 169, 178, 575, 815, 924, 1246, 1258, 1365 |
| HpaII | CCGG | 3 cut(s) | 224, 563, 1215 |
| HphI | GGTGA | 5 cut(s) | 187, 308, 413, 714, 1313 |
| Hpy166II | GTNNAC | 6 cut(s) | 363, 574, 654, 722, 948, 1207 |
| Hpy188I | TCNGA | 5 cut(s) | 54, 93, 481, 841, 979 |
| Hpy188III | TCNNGA | 9 cut(s) | 84, 130, 149, 166, 224, 317, 659, 677, 1250 |
| Hpy8I | GTNNAC | 6 cut(s) | 363, 574, 654, 722, 948, 1207 |
| Hpy99I | CGWCG | 2 cut(s) | 101, 143 |
| HpyAV | CCTTC | 2 cut(s) | 518, 1298 |
| HpyCH4III | ACNGT | 3 cut(s) | 380, 606, 952 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 107, 347 |
| HpyF3I | CTNAG | 6 cut(s) | 8, 51, 159, 171, 413, 1242 |
| Hsp92I | GRCGYC | 1 cut(s) | 126 |
| Hsp92II | CATG | 6 cut(s) | 196, 361, 649, 832, 1265, 1359 |
| HspAI | GCGC | 2 cut(s) | 5, 248 |
| Kpn2I | TCCGGA | 1 cut(s) | 223 |
| Kzo9I | GATC | 2 cut(s) | 550, 679 |
| LmnI | GCTCC | 4 cut(s) | 757, 860, 875, 1195 |
| Lsp1109I | GCAGC | 1 cut(s) | 733 |
| LweI | GCATC | 2 cut(s) | 259, 1046 |
| MabI | ACCWGGT | 1 cut(s) | 1294 |
| MaeI | CTAG | 2 cut(s) | 234, 368 |
| MaeIII | GTNAC | 5 cut(s) | 296, 374, 494, 1267, 1331 |
| MalI | GATC | 2 cut(s) | 552, 681 |
| MboI | GATC | 2 cut(s) | 550, 679 |
| MboII | GAAGA | 4 cut(s) | 21, 24, 473, 1267 |
| MfeI | CAATTG | 2 cut(s) | 423, 891 |
| MflI | RGATCY | 1 cut(s) | 550 |
| MhlI | GDGCHC | 2 cut(s) | 312, 352 |
| MluCI | AATT | 6 cut(s) | 64, 291, 423, 891, 1111, 1373 |
| MlyI | GAGTC | 5 cut(s) | 19, 163, 187, 569, 1252 |
| MroI | TCCGGA | 1 cut(s) | 223 |
| MseI | TTAA | 4 cut(s) | 1089, 1110, 1152, 1167 |
| MslI | CAYNNNNRTG | 2 cut(s) | 833, 1198 |
| MspCI | CTTAAG | 1 cut(s) | 1088 |
| MspI | CCGG | 3 cut(s) | 224, 563, 1215 |
| MspR9I | CCNGG | 4 cut(s) | 873, 1215, 1278, 1296 |
| MunI | CAATTG | 2 cut(s) | 423, 891 |
| Mva1269I | GAATGC | 2 cut(s) | 250, 1192 |
| MvaI | CCWGG | 3 cut(s) | 873, 1278, 1296 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 107, 347 |
| NciI | CCSGG | 1 cut(s) | 1215 |
| NdeI | CATATG | 2 cut(s) | 823, 1195 |
| NdeII | GATC | 2 cut(s) | 550, 679 |
| NlaIII | CATG | 6 cut(s) | 196, 361, 649, 832, 1265, 1359 |
| NlaIV | GGNNCC | 3 cut(s) | 391, 957, 1205 |
| NmuCI | GTSAC | 3 cut(s) | 296, 494, 1331 |
| NsbI | TGCGCA | 1 cut(s) | 249 |
| NspI | RCATGY | 1 cut(s) | 1359 |
| PaeI | GCATGC | 1 cut(s) | 1359 |
| PctI | GAATGC | 2 cut(s) | 250, 1192 |
| PfeI | GAWTC | 4 cut(s) | 815, 924, 1246, 1365 |
| PkrI | GCNGC | 3 cut(s) | 59, 125, 748 |
| PleI | GAGTC | 5 cut(s) | 18, 163, 186, 569, 1252 |
| PpsI | GAGTC | 5 cut(s) | 18, 163, 186, 569, 1252 |
| PshBI | ATTAAT | 1 cut(s) | 1110 |
| Psp6I | CCWGG | 3 cut(s) | 871, 1276, 1294 |
| PspEI | GGTNACC | 1 cut(s) | 1267 |
| PspGI | CCWGG | 3 cut(s) | 871, 1276, 1294 |
| PspN4I | GGNNCC | 3 cut(s) | 391, 957, 1205 |
| PspPI | GGNCC | 4 cut(s) | 389, 592, 1204, 1292 |
| PsuI | RGATCY | 1 cut(s) | 550 |
| RsaI | GTAC | 5 cut(s) | 263, 608, 644, 655, 1021 |
| RsaNI | GTAC | 5 cut(s) | 262, 607, 643, 654, 1020 |
| RseI | CAYNNNNRTG | 2 cut(s) | 833, 1198 |
| SaqAI | TTAA | 4 cut(s) | 1089, 1110, 1152, 1167 |
| SatI | GCNGC | 3 cut(s) | 58, 124, 747 |
| Sau3AI | GATC | 2 cut(s) | 550, 679 |
| Sau96I | GGNCC | 4 cut(s) | 389, 592, 1204, 1292 |
| SchI | GAGTC | 5 cut(s) | 19, 163, 187, 569, 1252 |
| ScrFI | CCNGG | 4 cut(s) | 873, 1215, 1278, 1296 |
| SduI | GDGCHC | 2 cut(s) | 312, 352 |
| SexAI | ACCWGGT | 1 cut(s) | 1294 |
| SfaNI | GCATC | 2 cut(s) | 259, 1046 |
| SinI | GGWCC | 3 cut(s) | 389, 1204, 1292 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 833, 1198 |
| SmlI | CTYRAG | 3 cut(s) | 577, 1088, 1250 |
| SmoI | CTYRAG | 3 cut(s) | 577, 1088, 1250 |
| SphI | GCATGC | 1 cut(s) | 1359 |
| Sse9I | AATT | 6 cut(s) | 64, 291, 423, 891, 1111, 1373 |
| SsiI | CCGC | 6 cut(s) | 39, 58, 108, 123, 505, 1009 |
| SspMI | CTAG | 2 cut(s) | 234, 368 |
| StyD4I | CCNGG | 4 cut(s) | 871, 1213, 1276, 1294 |
| StyI | CCWWGG | 5 cut(s) | 286, 448, 786, 996, 1159 |
| TaaI | ACNGT | 3 cut(s) | 380, 606, 952 |
| TaqI | TCGA | 1 cut(s) | 697 |
| TasI | AATT | 6 cut(s) | 64, 291, 423, 891, 1111, 1373 |
| TatI | WGTACW | 3 cut(s) | 642, 653, 1019 |
| TauI | GCSGC | 2 cut(s) | 60, 126 |
| TfiI | GAWTC | 4 cut(s) | 815, 924, 1246, 1365 |
| Tru1I | TTAA | 4 cut(s) | 1089, 1110, 1152, 1167 |
| Tru9I | TTAA | 4 cut(s) | 1089, 1110, 1152, 1167 |
| TscAI | CASTG | 4 cut(s) | 385, 417, 549, 934 |
| TseFI | GTSAC | 3 cut(s) | 296, 494, 1331 |
| TseI | GCWGC | 1 cut(s) | 746 |
| Tsp45I | GTSAC | 3 cut(s) | 296, 494, 1331 |
| TspDTI | ATGAA | 1 cut(s) | 1300 |
| TspRI | CASTG | 4 cut(s) | 385, 417, 549, 934 |
| Vha464I | CTTAAG | 1 cut(s) | 1088 |
| VpaK11BI | GGWCC | 3 cut(s) | 389, 1204, 1292 |
| VspI | ATTAAT | 1 cut(s) | 1110 |
| XceI | RCATGY | 1 cut(s) | 1359 |
| XmiI | GTMKAC | 1 cut(s) | 573 |
| XspI | CTAG | 2 cut(s) | 234, 368 |