Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0006887

Physical Location & Seq

Genomic Coordinates Reverse (-)

70806438 .. 70808072

Gene Structure 1635 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0522500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1635 bp

ATGCTCCATAGAAGTTTATCATGTGCCAAGACGATCAGTAATCTTGTAAACCAAGGGCAAAATTGTCAAGCAATAGCTCTGTTTCGCCGAGTGCGGGAAAATGGGTTTGAAGTCACAGGGTTTCTTCTCTCAGCAACTTTGCGAGCTTGTGGAAGAGTTGCTGCAATAAAAGAAGGCAAGCAGCTTCATGGCTTGGCGATCAAACATGGGTTCAATCGGGACACGATTCTAATGACGTCTCTTCTTGACTTGTACTGTAAATGCAATGAGATCAAAGACGCCCGCCATATGTTTGATGAAATGCCTGAGAGAGATGTGATTGCTACTAATTGCATGATTTCTGGATTGTGTTGGTCTCACTTAACAATGGAAGCGATTGAATTGTTTAATAACATGTGGGAAAGAGACGTTGGGTCTTGGAATTCACTGATTTCGGGTCTTGGGCATAACTCGGAAGGAAGGACCGGGTTGGCTTTCTTTGAGAAAATGAGATTGGAGGGAGCTGATGTTGATGTTATGACTGTGGTAAGTGTTCTTTCAATTTGTTCTGATCTTGCAGCGTTGCGTAATGGTAAACAAGTACATTGTTTGGTGATGAAGTATGGATTCGAGTTGTATTTGCCGGTTGGGAATGCTGTTGTTGACATGTATGCTAAATGTGGGTGCATGGAAGATGCTTTTGTATGTTTCAGGAACATGCATTTGAAAAATGTGGTTTCTTGGACTGCTTTGATTGCGGGTTATGGGAAACAAGGCCAGGGAATAGAAGCTTTGAAGGCGTTTGATGCAATGGAAATAGAAGGTGTTCGACCAAACAGAATCACATTCTTGGGTGCCTTGTATGCGTGTAGTCATGCAGGTTTAGTACAAGAAGGATGGAGGATTTTCAACATGATGGTGAATAAGTATTCGATAACACCAATGATGGAGCACTATACATGCATGGTGGATCTCCTAGCACGATCAGGGTATTTCAACGAGGCCTATAGCTTCATCGAGAGGATGCCTATAAAGCCAGACCCAAAGCTTCTCACAGCATTTCTGAGCTCATGTTGCTCTCACAAGAATTTAGAGCTAGGAAAGACTGTTGGGCAGAAATTGCTTGAATCACAACCTGAAGAAGCAGGAGCCTATATGTTGCTATCCAACTTCTATGGGCTTGTCGGAGACTTGCAAGGTGTGACAAAAGTGAGAAGATTGATGCTAGATAGAGGAATAAGGAAAGAAAAGGCAAGCACTTGGATTGAGATTAACAAAACAGTTCACAGTTTTCAATCAGGAGACAGATCCCATCCCCTAAGTAAAGACATCTACAACTACTTGCAACATCTTTTTCGGAAGTTGAAAATTAACCGGTACGTTCCAAACACAAGCATGGTAGTGCAAAATGTGGATGAACAGACAAAGGAGGAGATAGTTCTCAGTCATAGCGAGAAACTGGCAATTGGACTAGGCCTAATCAGCACACCTCCAGGTACCCGTATCGTTATAGTTAAGAACCTGAGAGTGTGCGCAGACTGTCATGTGGTAACTGGCTTAATTTCAAAGATTGAAGGGAGGGAGATTGTTGCAAGGGATTCGAGTCGATTCCATCATTTCAAAGATGGACTATGCTCTTGTGGAAATCATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0005488 GO:0005507 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008483 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009627 GO:0009719 GO:0009725 GO:0009735 GO:0009751 GO:0009814 GO:0009862 GO:0009863 GO:0009987 GO:0010033 GO:0010285 GO:0014070 GO:0016740 GO:0016769 GO:0023052 GO:0032870 GO:0035690 GO:0042221 GO:0042493 GO:0043167 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046677 GO:0046872 GO:0046914 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0098542 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00300 ko01100 ko01110 ko01130 ko01230 map00300 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

Aminotran_1_2

Protein Analysis

544

Amino Acids

61.06

Weight (kDa)

8.49

Isoelectric Point (pI)

37.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	236 - 280	2.3e-09	PPR repeat family
PPR	PF01535	239 - 269	5.5e-06	PPR repeat
PPR_long	PF17177	252 - 381	7.7e-06	Pentacotripeptide-repeat region of PRORP
E_motif	PF20431	354 - 416	7.5e-11	E motif
Eplus_motif	PF20430	421 - 448	4.3e-07	E+ motif
DYW_deaminase	PF14432	453 - 544	7.2e-38	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006887)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33680
fragaria_vesca	FvH4_2g02700 FvH4_2g02700
malus_domestica	MD00G1080600.v1.1 MD05G1111000.v1.1 MD10G1114500.v1.1
prunus_persica	Prupe.8G156000_v2.0.a1
pyrus_communis	pycom05g10690 pycom10g09890 pycom10g09900
rosa_chinensis	RchiOBHm_Chr6g0247121
rosa_laevigata	RLG00000015219 RLG00000030359 RLG00000030363
rosa_multiflora	Rmu_sc0004577.1_g000011 Rmu_sc0030830.1_g000004
rosa_roxburghii	Rroxscaffold_3G00276080 Rroxscaffold_7G00214330
rosa_rugosa	Rorug05G0522500 Rorug05G0522600
rosa_samantha	Rh6AG037800 Rh6BG032400 Rh6BG032700 Rh6CG033500 Rh6DG031200
rosa_wichuraiana	Rw6G003220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	239
Acc16I	TGCGCA	1 cut(s)	1513
Acc36I	ACCTGC	1 cut(s)	848
Acc65I	GGTACC	1 cut(s)	1475
AccB1I	GGYRCC	2 cut(s)	833, 1475
AciI	CCGC	3 cut(s)	94, 283, 737
AclWI	GGATC	2 cut(s)	957, 1281
AcsI	RAATTY	2 cut(s)	421, 1066
AcuI	CTGAAG	1 cut(s)	1137
AcyI	GRCGYC	2 cut(s)	236, 279
AfaI	GTAC	5 cut(s)	254, 582, 867, 1358, 1477
AfiI	CCNNNNNNNGG	1 cut(s)	94
AflIII	ACRYGT	2 cut(s)	393, 645
AgeI	ACCGGT	1 cut(s)	1353
AhdI	GACNNNNNGTC	1 cut(s)	412
AjnI	CCWGG	2 cut(s)	756, 1471
AjuI	GAANNNNNNNTTGG	4 cut(s)	393, 425, 476, 508
AluBI	AGCT	9 cut(s)	77, 146, 184, 503, 770, 990, 1027, 1047, 1075
AluI	AGCT	9 cut(s)	77, 146, 184, 503, 770, 990, 1027, 1047, 1075
Alw21I	GWGCWC	2 cut(s)	933, 1049
Alw26I	GTCTC	5 cut(s)	243, 360, 399, 1161, 1275
AlwI	GGATC	2 cut(s)	957, 1281
AoxI	GGCC	3 cut(s)	754, 981, 1453
ApeKI	GCWGC	3 cut(s)	161, 181, 557
ApoI	RAATTY	2 cut(s)	421, 1066
AsiGI	ACCGGT	1 cut(s)	1353
Asp700I	GAANNNNTTC	1 cut(s)	804
Asp718I	GGTACC	1 cut(s)	1475
AspLEI	GCGC	1 cut(s)	1514
AspS9I	GGNCC	1 cut(s)	462
AsuC2I	CCSGG	1 cut(s)	466
AsuHPI	GGTGA	2 cut(s)	604, 910
AvaII	GGWCC	1 cut(s)	462
BanI	GGYRCC	2 cut(s)	833, 1475
BanII	GRGCYC	1 cut(s)	1049
Bbv12I	GWGCWC	2 cut(s)	933, 1049
BbvI	GCAGC	3 cut(s)	148, 193, 569
BccI	CCATC	6 cut(s)	870, 889, 919, 1299, 1598, 1599
BcgI	CGANNNNNNTGC	2 cut(s)	1560, 1594
BciT130I	CCWGG	2 cut(s)	758, 1473
BcnI	CCSGG	1 cut(s)	466
BcoDI	GTCTC	5 cut(s)	243, 360, 399, 1161, 1275
BfaI	CTAG	4 cut(s)	956, 1076, 1205, 1451
BfmI	CTRYAG	1 cut(s)	985
BfuAI	ACCTGC	1 cut(s)	848
BisI	GCNGC	3 cut(s)	162, 182, 558
BlsI	GCNGC	3 cut(s)	163, 183, 559
Bme1390I	CCNGG	3 cut(s)	466, 758, 1473
Bme18I	GGWCC	1 cut(s)	462
BmeRI	GACNNNNNGTC	1 cut(s)	412
BmgT120I	GGNCC	1 cut(s)	462
BmiI	GGNNCC	3 cut(s)	835, 1129, 1477
BmrFI	CCNGG	3 cut(s)	466, 758, 1473
BmsI	GCATC	4 cut(s)	664, 775, 993, 1191
BpmI	CTGGAG	1 cut(s)	1455
BpuMI	CCSGG	1 cut(s)	466
BsaHI	GRCGYC	2 cut(s)	236, 279
BsaI	GGTCTC	1 cut(s)	360
BsaJI	CCNNGG	2 cut(s)	52, 757
BsaWI	WCCGGW	1 cut(s)	1353
BsaXI	ACNNNNNCTCC	2 cut(s)	492, 522
Bsc4I	CCNNNNNNNGG	1 cut(s)	94
Bse118I	RCCGGY	2 cut(s)	622, 1353
Bse1I	ACTGG	2 cut(s)	1443, 1537
Bse3DI	GCAATG	2 cut(s)	271, 795
BseBI	CCWGG	2 cut(s)	758, 1473
BseDI	CCNNGG	2 cut(s)	52, 757
BseGI	GGATG	4 cut(s)	881, 1008, 1291, 1399
BseLI	CCNNNNNNNGG	1 cut(s)	94
BseMI	GCAATG	2 cut(s)	271, 795
BseMII	CTCAG	5 cut(s)	144, 297, 1034, 1435, 1493
BseNI	ACTGG	2 cut(s)	1443, 1537
BseRI	GAGGAG	1 cut(s)	1424
BseXI	GCAGC	3 cut(s)	148, 193, 569
BshFI	GGCC	3 cut(s)	756, 983, 1455
BshNI	GGYRCC	2 cut(s)	833, 1475
BshTI	ACCGGT	1 cut(s)	1353
BsiHKAI	GWGCWC	2 cut(s)	933, 1049
BsiSI	CCGG	3 cut(s)	465, 623, 1354
BslFI	GGGAC	1 cut(s)	233
BslI	CCNNNNNNNGG	1 cut(s)	94
BsmAI	GTCTC	5 cut(s)	243, 360, 399, 1161, 1275
BsmBI	CGTCTC	2 cut(s)	243, 399
BsmFI	GGGAC	1 cut(s)	233
BsmI	GAATGC	1 cut(s)	637
BsnI	GGCC	3 cut(s)	756, 983, 1455
Bso31I	GGTCTC	1 cut(s)	360
Bsp1286I	GDGCHC	2 cut(s)	933, 1049
Bsp143I	GATC	7 cut(s)	33, 198, 270, 550, 949, 962, 1286
BspACI	CCGC	3 cut(s)	94, 283, 737
BspANI	GGCC	3 cut(s)	756, 983, 1455
BspCNI	CTCAG	5 cut(s)	143, 298, 1035, 1434, 1494
BspLI	GGNNCC	3 cut(s)	835, 1129, 1477
BspMI	ACCTGC	1 cut(s)	848
BspPI	GGATC	2 cut(s)	957, 1281
BspT107I	GGYRCC	2 cut(s)	833, 1475
BspTNI	GGTCTC	1 cut(s)	360
BsrDI	GCAATG	2 cut(s)	271, 795
BsrFI	RCCGGY	2 cut(s)	622, 1353
BsrI	ACTGG	2 cut(s)	1443, 1537
BssAI	RCCGGY	2 cut(s)	622, 1353
BssECI	CCNNGG	2 cut(s)	52, 757
BssMI	GATC	7 cut(s)	33, 198, 270, 550, 949, 962, 1286
BssNI	GRCGYC	2 cut(s)	236, 279
BssT1I	CCWWGG	1 cut(s)	52
Bst2UI	CCWGG	2 cut(s)	758, 1473
Bst4CI	ACNGT	6 cut(s)	257, 523, 1087, 1261, 1268, 1520
Bst6I	CTCTTC	2 cut(s)	148, 246
BstACI	GRCGYC	2 cut(s)	236, 279
BstAPI	GCANNNNNTGC	1 cut(s)	1099
BstC8I	GCNNGC	4 cut(s)	144, 179, 283, 1234
BstDEI	CTNAG	6 cut(s)	130, 306, 1043, 1298, 1421, 1502
BstF5I	GGATG	4 cut(s)	881, 1008, 1291, 1399
BstHHI	GCGC	1 cut(s)	1514
BstKTI	GATC	7 cut(s)	36, 201, 273, 553, 952, 965, 1289
BstMAI	GTCTC	5 cut(s)	243, 360, 399, 1161, 1275
BstMBI	GATC	7 cut(s)	33, 198, 270, 550, 949, 962, 1286
BstMWI	GCNNNNNNNGC	8 cut(s)	734, 776, 785, 842, 1012, 1053, 1099, 1461
BstNI	CCWGG	2 cut(s)	758, 1473
BstNSI	RCATGY	4 cut(s)	397, 649, 700, 942
BstSCI	CCNGG	3 cut(s)	464, 756, 1471
BstSFI	CTRYAG	1 cut(s)	985
BstV1I	GCAGC	3 cut(s)	148, 193, 569
BstX2I	RGATCY	2 cut(s)	949, 1286
BstYI	RGATCY	2 cut(s)	949, 1286
BsuRI	GGCC	3 cut(s)	756, 983, 1455
BtsCI	GGATG	4 cut(s)	881, 1008, 1291, 1399
BtsIMutI	CAGTG	1 cut(s)	425
BveI	ACCTGC	1 cut(s)	848
Cac8I	GCNNGC	4 cut(s)	144, 179, 283, 1234
CfoI	GCGC	1 cut(s)	1514
Cfr10I	RCCGGY	2 cut(s)	622, 1353
Cfr13I	GGNCC	1 cut(s)	462
CseI	GACGC	1 cut(s)	287
Csp6I	GTAC	5 cut(s)	253, 581, 866, 1357, 1476
CspAI	ACCGGT	1 cut(s)	1353
CviQI	GTAC	5 cut(s)	253, 581, 866, 1357, 1476
DdeI	CTNAG	6 cut(s)	130, 306, 1043, 1298, 1421, 1502
DpnI	GATC	7 cut(s)	35, 200, 272, 552, 951, 964, 1288
DpnII	GATC	7 cut(s)	33, 198, 270, 550, 949, 962, 1286
DriI	GACNNNNNGTC	1 cut(s)	412
Eam1104I	CTCTTC	2 cut(s)	148, 246
Eam1105I	GACNNNNNGTC	1 cut(s)	412
EarI	CTCTTC	2 cut(s)	148, 246
Ecl136II	GAGCTC	1 cut(s)	1047
Eco130I	CCWWGG	1 cut(s)	52
Eco147I	AGGCCT	2 cut(s)	983, 1455
Eco24I	GRGCYC	1 cut(s)	1049
Eco31I	GGTCTC	1 cut(s)	360
Eco47I	GGWCC	1 cut(s)	462
Eco53kI	GAGCTC	1 cut(s)	1047
Eco57I	CTGAAG	1 cut(s)	1137
EcoICRI	GAGCTC	1 cut(s)	1047
EcoRI	GAATTC	1 cut(s)	421
EcoRII	CCWGG	2 cut(s)	756, 1471
EcoT14I	CCWWGG	1 cut(s)	52
EcoT22I	ATGCAT	2 cut(s)	702, 944
EcoT38I	GRGCYC	1 cut(s)	1049
ErhI	CCWWGG	1 cut(s)	52
Esp3I	CGTCTC	2 cut(s)	243, 399
FaqI	GGGAC	1 cut(s)	233
FauI	CCCGC	3 cut(s)	87, 290, 730
FauNDI	CATATG	1 cut(s)	288
Fnu4HI	GCNGC	3 cut(s)	162, 182, 558
FokI	GGATG	4 cut(s)	888, 1015, 1278, 1406
FriOI	GRGCYC	1 cut(s)	1049
Fsp4HI	GCNGC	3 cut(s)	162, 182, 558
FspBI	CTAG	4 cut(s)	956, 1076, 1205, 1451
FspI	TGCGCA	1 cut(s)	1513
GlaI	GCGC	1 cut(s)	1513
GluI	GCNGC	3 cut(s)	162, 182, 558
GsuI	CTGGAG	1 cut(s)	1455
HaeIII	GGCC	3 cut(s)	756, 983, 1455
HapII	CCGG	3 cut(s)	465, 623, 1354
HgaI	GACGC	1 cut(s)	287
HhaI	GCGC	1 cut(s)	1514
Hin1I	GRCGYC	2 cut(s)	236, 279
Hin6I	GCGC	1 cut(s)	1512
HinP1I	GCGC	1 cut(s)	1512
HincII	GTYRAC	1 cut(s)	643
HindII	GTYRAC	1 cut(s)	643
HindIII	AAGCTT	2 cut(s)	768, 1025
HinfI	GANTC	7 cut(s)	226, 606, 819, 1106, 1577, 1582, 1587
HpaII	CCGG	3 cut(s)	465, 623, 1354
HphI	GGTGA	2 cut(s)	604, 910
Hpy166II	GTNNAC	4 cut(s)	49, 575, 643, 1264
Hpy188I	TCNGA	5 cut(s)	454, 550, 1044, 1166, 1338
Hpy188III	TCNNGA	6 cut(s)	218, 245, 342, 691, 997, 1278
Hpy8I	GTNNAC	4 cut(s)	49, 575, 643, 1264
HpyAV	CCTTC	7 cut(s)	167, 449, 453, 769, 794, 866, 1547
HpyCH4III	ACNGT	6 cut(s)	257, 523, 1087, 1261, 1268, 1520
HpyCH4IV	ACGT	3 cut(s)	236, 408, 1359
HpyF10VI	GCNNNNNNNGC	8 cut(s)	734, 776, 785, 842, 1012, 1053, 1099, 1461
HpyF3I	CTNAG	6 cut(s)	130, 306, 1043, 1298, 1421, 1502
HpySE526I	ACGT	3 cut(s)	236, 408, 1359
Hsp92I	GRCGYC	2 cut(s)	236, 279
HspAI	GCGC	1 cut(s)	1512
KpnI	GGTACC	1 cut(s)	1479
Kzo9I	GATC	7 cut(s)	33, 198, 270, 550, 949, 962, 1286
LmnI	GCTCC	4 cut(s)	9, 500, 928, 1127
Lsp1109I	GCAGC	3 cut(s)	148, 193, 569
LweI	GCATC	4 cut(s)	664, 775, 993, 1191
MaeI	CTAG	4 cut(s)	956, 1076, 1205, 1451
MaeII	ACGT	3 cut(s)	236, 408, 1359
MaeIII	GTNAC	3 cut(s)	112, 1180, 1528
MalI	GATC	7 cut(s)	35, 200, 272, 552, 951, 964, 1288
MboI	GATC	7 cut(s)	33, 198, 270, 550, 949, 962, 1286
MboII	GAAGA	6 cut(s)	116, 165, 233, 683, 1130, 1206
MfeI	CAATTG	1 cut(s)	1443
MflI	RGATCY	2 cut(s)	949, 1286
MhlI	GDGCHC	2 cut(s)	933, 1049
MlyI	GAGTC	1 cut(s)	1591
MmeI	TCCRAC	2 cut(s)	1144, 1170
MnlI	CCTC	8 cut(s)	490, 873, 973, 993, 1205, 1402, 1479, 1551
Mph1103I	ATGCAT	2 cut(s)	702, 944
MroXI	GAANNNNTTC	1 cut(s)	804
MseI	TTAA	6 cut(s)	362, 387, 1251, 1350, 1494, 1538
MslI	CAYNNNNRTG	3 cut(s)	896, 1373, 1379
MspI	CCGG	3 cut(s)	465, 623, 1354
MspR9I	CCNGG	3 cut(s)	466, 758, 1473
MunI	CAATTG	1 cut(s)	1443
Mva1269I	GAATGC	1 cut(s)	637
MvaI	CCWGG	2 cut(s)	758, 1473
MwoI	GCNNNNNNNGC	8 cut(s)	734, 776, 785, 842, 1012, 1053, 1099, 1461
NciI	CCSGG	1 cut(s)	466
NdeI	CATATG	1 cut(s)	288
NdeII	GATC	7 cut(s)	33, 198, 270, 550, 949, 962, 1286
NlaIV	GGNNCC	3 cut(s)	835, 1129, 1477
NmeAIII	GCCGAG	1 cut(s)	113
NmuCI	GTSAC	2 cut(s)	112, 1180
NsbI	TGCGCA	1 cut(s)	1513
NsiI	ATGCAT	2 cut(s)	702, 944
NspI	RCATGY	4 cut(s)	397, 649, 700, 942
PceI	AGGCCT	2 cut(s)	983, 1455
PciI	ACATGT	2 cut(s)	393, 645
PctI	GAATGC	1 cut(s)	637
PdmI	GAANNNNTTC	1 cut(s)	804
PfeI	GAWTC	6 cut(s)	226, 606, 819, 1106, 1577, 1587
PinAI	ACCGGT	1 cut(s)	1353
PkrI	GCNGC	3 cut(s)	163, 183, 559
PleI	GAGTC	1 cut(s)	1590
PpsI	GAGTC	1 cut(s)	1590
PscI	ACATGT	2 cut(s)	393, 645
Psp124BI	GAGCTC	1 cut(s)	1049
Psp6I	CCWGG	2 cut(s)	756, 1471
PspGI	CCWGG	2 cut(s)	756, 1471
PspN4I	GGNNCC	3 cut(s)	835, 1129, 1477
PspPI	GGNCC	1 cut(s)	462
PsuI	RGATCY	2 cut(s)	949, 1286
RsaI	GTAC	5 cut(s)	254, 582, 867, 1358, 1477
RsaNI	GTAC	5 cut(s)	253, 581, 866, 1357, 1476
RseI	CAYNNNNRTG	3 cut(s)	896, 1373, 1379
SacI	GAGCTC	1 cut(s)	1049
SaqAI	TTAA	6 cut(s)	362, 387, 1251, 1350, 1494, 1538
SatI	GCNGC	3 cut(s)	162, 182, 558
Sau3AI	GATC	7 cut(s)	33, 198, 270, 550, 949, 962, 1286
Sau96I	GGNCC	1 cut(s)	462
SchI	GAGTC	1 cut(s)	1591
ScrFI	CCNGG	3 cut(s)	466, 758, 1473
SduI	GDGCHC	2 cut(s)	933, 1049
SfaNI	GCATC	4 cut(s)	664, 775, 993, 1191
SfcI	CTRYAG	1 cut(s)	985
SinI	GGWCC	1 cut(s)	462
SmiMI	CAYNNNNRTG	3 cut(s)	896, 1373, 1379
SseBI	AGGCCT	2 cut(s)	983, 1455
SsiI	CCGC	3 cut(s)	94, 283, 737
SspMI	CTAG	4 cut(s)	956, 1076, 1205, 1451
SstI	GAGCTC	1 cut(s)	1049
StuI	AGGCCT	2 cut(s)	983, 1455
StyD4I	CCNGG	3 cut(s)	464, 756, 1471
StyI	CCWWGG	1 cut(s)	52
TaaI	ACNGT	6 cut(s)	257, 523, 1087, 1261, 1268, 1520
TaiI	ACGT	3 cut(s)	239, 411, 1362
TaqI	TCGA	6 cut(s)	609, 808, 911, 996, 1580, 1585
TatI	WGTACW	3 cut(s)	252, 580, 865
TfiI	GAWTC	6 cut(s)	226, 606, 819, 1106, 1577, 1587
Tru1I	TTAA	6 cut(s)	362, 387, 1251, 1350, 1494, 1538
Tru9I	TTAA	6 cut(s)	362, 387, 1251, 1350, 1494, 1538
TscAI	CASTG	1 cut(s)	432
TseFI	GTSAC	2 cut(s)	112, 1180
TseI	GCWGC	3 cut(s)	161, 181, 557
Tsp45I	GTSAC	2 cut(s)	112, 1180
TspDTI	ATGAA	5 cut(s)	176, 312, 611, 982, 1410
TspRI	CASTG	1 cut(s)	432
VpaK11BI	GGWCC	1 cut(s)	462
XapI	RAATTY	2 cut(s)	421, 1066
XceI	RCATGY	4 cut(s)	397, 649, 700, 942
XmnI	GAANNNNTTC	1 cut(s)	804
XspI	CTAG	4 cut(s)	956, 1076, 1205, 1451
ZraI	GACGTC	1 cut(s)	237
Zsp2I	ATGCAT	2 cut(s)	702, 944

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.