pycom05g14640

Ferric-chelate reductase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
18197982 .. 18198642
661 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g14640.1

Sequence Viewer

Length: 354 bp
ATGGGGCATTTTGATGATAATTGGAGTGTTCTATGTGGATTTGTCTTGAACAATAAGCTCAATGCTGATGTCTCCACCCACAAATCTCTTGGTATCTTCGTTCTTGTCCTCGGTTGCCTTCAGGTTATGGCTCTTTTGGTTCGACCGGAGAAGGAATCAAAGGTTCGAAAGTACTGGAATTGGTACCATCAAGGAGTGGGAAGGATTCTGATCATATTTGCAGTAGCAAATGTTTTCTATGGAATCCATTTGGGAGAAAAAGGGAAGGGATGGAGTGCTGGCTATGGTGTTGTTATTGCTATCTTATTTGTTACTGCTTTTATATTGGAGTTGAGATTGTGGCTTAGAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

118

Amino Acids

13.28

Weight (kDa)

9.6

Isoelectric Point (pI)

29.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 183
AccB1I GGYRCC 1 cut(s) 183
AcuI CTGAAG 1 cut(s) 104
AfaI GTAC 2 cut(s) 173, 185
AgsI TTSAA 1 cut(s) 49
AluBI AGCT 1 cut(s) 58
AluI AGCT 1 cut(s) 58
Alw26I GTCTC 1 cut(s) 76
Asp718I GGTACC 1 cut(s) 183
AsuII TTCGAA 1 cut(s) 166
BanI GGYRCC 1 cut(s) 183
BccI CCATC 2 cut(s) 195, 264
BclI TGATCA 1 cut(s) 210
BcoDI GTCTC 1 cut(s) 76
BmcAI AGTACT 1 cut(s) 173
BmiI GGNNCC 1 cut(s) 185
Bpu14I TTCGAA 1 cut(s) 166
BsaBI GATNNNNATC 1 cut(s) 209
BsaJI CCNNGG 1 cut(s) 109
BsaWI WCCGGW 1 cut(s) 145
Bse1I ACTGG 1 cut(s) 179
Bse8I GATNNNNATC 1 cut(s) 209
BseDI CCNNGG 1 cut(s) 109
BseGI GGATG 1 cut(s) 275
BseJI GATNNNNATC 1 cut(s) 209
BseNI ACTGG 1 cut(s) 179
Bsh1285I CGRYCG 1 cut(s) 146
BshNI GGYRCC 1 cut(s) 183
BsiEI CGRYCG 1 cut(s) 146
BsiSI CCGG 1 cut(s) 146
BsmAI GTCTC 1 cut(s) 76
Bsp119I TTCGAA 1 cut(s) 166
Bsp143I GATC 1 cut(s) 210
BspLI GGNNCC 1 cut(s) 185
BspT104I TTCGAA 1 cut(s) 166
BspT107I GGYRCC 1 cut(s) 183
BsrI ACTGG 1 cut(s) 179
BssECI CCNNGG 1 cut(s) 109
BssMI GATC 1 cut(s) 210
BstBI TTCGAA 1 cut(s) 166
BstC8I GCNNGC 1 cut(s) 280
BstDEI CTNAG 1 cut(s) 344
BstF5I GGATG 1 cut(s) 275
BstKTI GATC 1 cut(s) 213
BstMAI GTCTC 1 cut(s) 76
BstMBI GATC 1 cut(s) 210
BstMCI CGRYCG 1 cut(s) 146
BtsCI GGATG 1 cut(s) 275
Cac8I GCNNGC 1 cut(s) 280
Csp6I GTAC 2 cut(s) 172, 184
CviJI RGCY 4 cut(s) 58, 131, 282, 343
CviKI_1 RGCY 4 cut(s) 58, 131, 282, 343
CviQI GTAC 2 cut(s) 172, 184
DdeI CTNAG 1 cut(s) 344
DpnI GATC 1 cut(s) 212
DpnII GATC 1 cut(s) 210
Eco57I CTGAAG 1 cut(s) 104
FaiI YATR 6 cut(s) 34, 128, 215, 240, 285, 323
FbaI TGATCA 1 cut(s) 210
FokI GGATG 1 cut(s) 282
HapII CCGG 1 cut(s) 146
HinfI GANTC 3 cut(s) 155, 205, 243
HpaII CCGG 1 cut(s) 146
Hpy188I TCNGA 1 cut(s) 210
Hpy188III TCNNGA 1 cut(s) 46
HpyAV CCTTC 4 cut(s) 128, 145, 195, 259
HpyCH4V TGCA 1 cut(s) 221
HpyF3I CTNAG 1 cut(s) 344
KpnI GGTACC 1 cut(s) 187
Ksp22I TGATCA 1 cut(s) 210
Kzo9I GATC 1 cut(s) 210
LpnPI CCDG 4 cut(s) 107, 159, 160, 264
MaeIII GTNAC 1 cut(s) 310
MalI GATC 1 cut(s) 212
MboI GATC 1 cut(s) 210
MboII GAAGA 1 cut(s) 88
MluCI AATT 2 cut(s) 19, 178
MnlI CCTC 1 cut(s) 119
MslI CAYNNNNRTG 1 cut(s) 12
MspI CCGG 1 cut(s) 146
NdeII GATC 1 cut(s) 210
NlaIV GGNNCC 1 cut(s) 185
NspV TTCGAA 1 cut(s) 166
PfeI GAWTC 3 cut(s) 155, 205, 243
PspN4I GGNNCC 1 cut(s) 185
RsaI GTAC 2 cut(s) 173, 185
RsaNI GTAC 2 cut(s) 172, 184
RseI CAYNNNNRTG 1 cut(s) 12
Sau3AI GATC 1 cut(s) 210
ScaI AGTACT 1 cut(s) 173
SetI ASST 3 cut(s) 60, 126, 165
SfuI TTCGAA 1 cut(s) 166
SgeI CNNG 9 cut(s) 58, 101, 116, 122, 134, 158, 187, 203, 291
SmiMI CAYNNNNRTG 1 cut(s) 12
Sse9I AATT 2 cut(s) 19, 178
TaqI TCGA 2 cut(s) 142, 166
TasI AATT 2 cut(s) 19, 178
TatI WGTACW 1 cut(s) 171
TfiI GAWTC 3 cut(s) 155, 205, 243
XcmI CCANNNNNNNNNTGG 1 cut(s) 86
ZrmI AGTACT 1 cut(s) 173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.