Rh3CG032600

Ferric-chelate reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0005090
Physical Location & Seq
Forward (+)
2254200 .. 2254781
582 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG032600.1

Sequence Viewer

Length: 435 bp
ATGACTATTCTCTGTTTGGAACTGAAACAGGTCAAACACTCAAACATCGAGCACAGGAAGTCCATATACAAGATTAAGAAGGAGCCATGGAGCACTGAATATGCTTGGATGGGGCAATCTCTGATGATAATTGGAGTAATAGTTGCTCGTCACTTAAAGTCCTATGATCCACTTTGGTTTTACCTTCATATTGGCATCCAATCATTCGCCTTTGTGTTTGGAATAATAGGTGTCATTTGTGGATTTGTCTTAGACAATAAGACTAATGCTGATGTCTCCACCCACAAAGCTCTTGGTATCTTCATTCTTGTGCTTAGATGTCTTCAGGTGATGGCATTTTTGGCTCGACCAGATAAGGTATCGAAAGCGCGAAAATACTGGAATTGGTACCATCAAACCGTGGGAAGGCTTCTGATTATTCTTGCTGAACTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cytochrom_B561 DOMON

Protein Analysis

144

Amino Acids

16.71

Weight (kDa)

9.65

Isoelectric Point (pI)

44.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cytochrom_B561 PF03188 37 - 142 8.4e-07 Eukaryotic cytochrome b561
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 387
AccB1I GGYRCC 1 cut(s) 387
AccII CGCG 1 cut(s) 370
AclWI GGATC 1 cut(s) 161
AcuI CTGAAG 1 cut(s) 308
AfaI GTAC 1 cut(s) 389
AfiI CCNNNNNNNGG 1 cut(s) 405
AluBI AGCT 1 cut(s) 290
AluI AGCT 1 cut(s) 290
Alw21I GWGCWC 2 cut(s) 54, 95
Alw26I GTCTC 1 cut(s) 280
AlwI GGATC 1 cut(s) 161
Asp718I GGTACC 1 cut(s) 387
AspLEI GCGC 1 cut(s) 370
AsuHPI GGTGA 1 cut(s) 340
BanI GGYRCC 1 cut(s) 387
BarI GAAGNNNNNNTAC 2 cut(s) 50, 82
BbsI GAAGAC 1 cut(s) 314
Bbv12I GWGCWC 2 cut(s) 54, 95
BccI CCATC 3 cut(s) 103, 325, 399
BcoDI GTCTC 1 cut(s) 280
BfmI CTRYAG 1 cut(s) 431
BmiI GGNNCC 2 cut(s) 84, 389
BmsI GCATC 1 cut(s) 204
BpiI GAAGAC 1 cut(s) 314
BsaJI CCNNGG 2 cut(s) 86, 399
BsaXI ACNNNNNCTCC 2 cut(s) 126, 156
Bsc4I CCNNNNNNNGG 1 cut(s) 405
Bse1I ACTGG 1 cut(s) 383
BseDI CCNNGG 2 cut(s) 86, 399
BseGI GGATG 2 cut(s) 114, 195
BseLI CCNNNNNNNGG 1 cut(s) 405
BseNI ACTGG 1 cut(s) 383
Bsh1236I CGCG 1 cut(s) 370
BshNI GGYRCC 1 cut(s) 387
BsiHKAI GWGCWC 2 cut(s) 54, 95
BslI CCNNNNNNNGG 1 cut(s) 405
BsmAI GTCTC 1 cut(s) 280
Bsp1286I GDGCHC 2 cut(s) 54, 95
Bsp143I GATC 1 cut(s) 166
Bsp19I CCATGG 1 cut(s) 86
BspFNI CGCG 1 cut(s) 370
BspLI GGNNCC 2 cut(s) 84, 389
BspPI GGATC 1 cut(s) 161
BspT107I GGYRCC 1 cut(s) 387
BsrI ACTGG 1 cut(s) 383
BssECI CCNNGG 2 cut(s) 86, 399
BssMI GATC 1 cut(s) 166
BssT1I CCWWGG 1 cut(s) 86
Bst4CI ACNGT 2 cut(s) 400, 432
BstDEI CTNAG 2 cut(s) 250, 314
BstDSI CCRYGG 2 cut(s) 86, 399
BstF5I GGATG 2 cut(s) 114, 195
BstFNI CGCG 1 cut(s) 370
BstHHI GCGC 1 cut(s) 370
BstKTI GATC 1 cut(s) 169
BstMAI GTCTC 1 cut(s) 280
BstMBI GATC 1 cut(s) 166
BstMWI GCNNNNNNNGC 1 cut(s) 341
BstSFI CTRYAG 1 cut(s) 431
BstUI CGCG 1 cut(s) 370
BstV2I GAAGAC 1 cut(s) 314
BtgI CCRYGG 2 cut(s) 86, 399
BtsCI GGATG 2 cut(s) 114, 195
BtsIMutI CAGTG 1 cut(s) 93
CfoI GCGC 1 cut(s) 370
Csp6I GTAC 1 cut(s) 388
CviAII CATG 1 cut(s) 87
CviJI RGCY 4 cut(s) 85, 290, 344, 409
CviKI_1 RGCY 4 cut(s) 85, 290, 344, 409
CviQI GTAC 1 cut(s) 388
DdeI CTNAG 2 cut(s) 250, 314
DpnI GATC 1 cut(s) 168
DpnII GATC 1 cut(s) 166
Eco130I CCWWGG 1 cut(s) 86
Eco57I CTGAAG 1 cut(s) 308
EcoT14I CCWWGG 1 cut(s) 86
ErhI CCWWGG 1 cut(s) 86
FaeI CATG 1 cut(s) 90
FaiI YATR 6 cut(s) 65, 67, 88, 102, 165, 189
FatI CATG 1 cut(s) 86
FokI GGATG 2 cut(s) 121, 182
GlaI GCGC 1 cut(s) 369
HhaI GCGC 1 cut(s) 370
Hin1II CATG 1 cut(s) 90
Hin6I GCGC 1 cut(s) 368
HinP1I GCGC 1 cut(s) 368
HphI GGTGA 1 cut(s) 340
Hpy188I TCNGA 2 cut(s) 123, 414
HpyAV CCTTC 3 cut(s) 73, 194, 399
HpyCH4III ACNGT 2 cut(s) 400, 432
HpyF10VI GCNNNNNNNGC 1 cut(s) 341
HpyF3I CTNAG 2 cut(s) 250, 314
Hsp92II CATG 1 cut(s) 90
HspAI GCGC 1 cut(s) 368
KpnI GGTACC 1 cut(s) 391
Kzo9I GATC 1 cut(s) 166
LmnI GCTCC 2 cut(s) 82, 90
LpnPI CCDG 5 cut(s) 14, 40, 311, 363, 364
LweI GCATC 1 cut(s) 204
MaeIII GTNAC 1 cut(s) 149
MalI GATC 1 cut(s) 168
MboI GATC 1 cut(s) 166
MboII GAAGA 2 cut(s) 292, 314
MhlI GDGCHC 2 cut(s) 54, 95
MluCI AATT 2 cut(s) 129, 382
MseI TTAA 2 cut(s) 75, 155
MslI CAYNNNNRTG 1 cut(s) 308
MvnI CGCG 1 cut(s) 370
MwoI GCNNNNNNNGC 1 cut(s) 341
NcoI CCATGG 1 cut(s) 86
NdeII GATC 1 cut(s) 166
NlaIII CATG 1 cut(s) 90
NlaIV GGNNCC 2 cut(s) 84, 389
NmuCI GTSAC 1 cut(s) 149
PspN4I GGNNCC 2 cut(s) 84, 389
RsaI GTAC 1 cut(s) 389
RsaNI GTAC 1 cut(s) 388
RseI CAYNNNNRTG 1 cut(s) 308
SaqAI TTAA 2 cut(s) 75, 155
Sau3AI GATC 1 cut(s) 166
SduI GDGCHC 2 cut(s) 54, 95
SetI ASST 6 cut(s) 33, 186, 232, 292, 330, 360
SfaNI GCATC 1 cut(s) 204
SfcI CTRYAG 1 cut(s) 431
SmiMI CAYNNNNRTG 1 cut(s) 308
Sse9I AATT 2 cut(s) 129, 382
StyI CCWWGG 1 cut(s) 86
TaaI ACNGT 2 cut(s) 400, 432
TaqI TCGA 3 cut(s) 48, 346, 362
TasI AATT 2 cut(s) 129, 382
Tru1I TTAA 2 cut(s) 75, 155
Tru9I TTAA 2 cut(s) 75, 155
TscAI CASTG 1 cut(s) 100
TseFI GTSAC 1 cut(s) 149
Tsp45I GTSAC 1 cut(s) 149
TspDTI ATGAA 2 cut(s) 176, 292
TspRI CASTG 1 cut(s) 100
XcmI CCANNNNNNNNNTGG 1 cut(s) 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.