Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0005090

Physical Location & Seq

Genomic Coordinates Reverse (-)

43077518 .. 43084576

Gene Structure 7059 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG258900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGGCTATTCTCTCTGCTAACCTGGCCTCTTCTGCTGCACTTGCATTGATACTGGTAGCGGCTTCGCTGTGTGTGATTGAAGCCAAACAATTTGGAATTGGGATTGAAATTGGAAGCAGAGGAAGGCCAAGGCAGAGAGAGTTTGATTACTTTAACTTGGCCTTACAATGGCCTGGAACCTACTGTCAACGCACCCGTTATTGCTGCCCCAACAACGCCTGCTGCCGAGGCTCAAATTCTCCGGCTGTGTTCACAATCCATGGATTGTGGCCTGACTACAATGATGGAAGCTGGCCTGCCTGTTGCACAAAGAAGAGTTTTGATGAAAAAGAGATCTCAACATTGCTTGACCCCTTGGAGAAATACTGGCCCTCATTAAGTTGTGGTAAACCATCATCCTGCCATGGTGGAAAAGGATCCTTTTGGGGTCATGAGTGGGAGAAGCATGGGACTTGCTCCGCTCCAGTAACTGGAGATGAATACAACTACTTTTTGACGACCCTCAATGTGTATTTTAAATACAACGTCACAAAAGTCCTGAATGAAGCAGGATATGTACCTTCTAATACTGAAAAATATCCTCTTGGAGGCATTGTTTCTGCCATTCAGAATGCTTTCCATGCAACCCCAAAGTTGGTTTGCAGAAATGGTGCTGTGGAGGAACTTCATCTTTGCTTCTACAAGGATTTCAAGCCCCGGGATTGTGCAGGTGGATCTAGCAGTTCAAGTGACATGTTATTTTCTAGTAGCTCATGTCCACATTACATCAGCTTACCAGCATATGCATCACTGGCCATAGTGAATTCCCAAACAGATTCCTGCAGCTCAAGTCTAAACCTCCGGAGTGTCAATCTGCCCTTTGATGCAGCTTCCCTCAACTGCGATGCTGTGTGGGATTCTCAGGGTTACATCCTCAGATACTCACAGACCACACCAGGAACATGGACCTTTGTTCTCTCAGCACCTGCAGCAAATTCCTACATAGCAATGGGGTTCTCAAGCAATGGCCAGATGACGGGGTCCAGTGCGATTGTGGGGTGGGTGTCCTCAACAGAGGGAGGAGTAATTAAGCGGTACTACCTAGGTGGGACTTCATCAAACCTTGTGGAGGTCGACAAAGGGAACCTAGTTCTTACCAACTTCTCCTTCATCACAAATCAGTCTTCCACGGTATACATGGGGTTCCAGTTGGTGGCTGACCAACCACAAAGTAGGCTCATATACTCAGTTGGCCCAACTGGGTTGCTTCCTGTAGCACCTAACTACAGGTTGACCGAGCACTTTGACAAGGTCTCCACCACCATAAATTACATTACAGGTCAAACATCGAGCACAGGAAGTCCATATACAAGATTAAGAAGGAGCCATGGAGCACTGAATATGCTTGGATGGGGCATTTTGATGATAATTGGAGTAATAGTTGCTCGTCACTTAAAGTCCTATGATCCACTTTGGTTTTACCTTCATATTGGCATCCAATCATTCGCATTTGTGTTTGGAATAATAGGTGTCATTTGTGGATTTGTCTTAGACAATAAGACTAAAGCTGATGTCTCCACCCACAAAGCTCTTGGTATCTTCATTCTTGTGCTTGGATGTCTTCAGGTGATGGCATTTTTGGCTCGACCAGATAAGGTATCGAAAGCACGAAAATACTGGAATTGGTACCATCAAAGCGTGGGAAGGCTTCTGATTATTCTTGCAGTTGCAAATGTTTTCTATGGAATCCATGTGGGAGAAGAAGGAACAGCATGGAATGCTGGATATGGAGCTGTTCTTGCTATCTTGGTTGTTATTGCTGTTATTCTCGAATTAAAATTGTGGTTTAGAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cytochrom_B561 DOMON

Protein Analysis

611

Amino Acids

66.89

Weight (kDa)

8.64

Isoelectric Point (pI)

42.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribonuclease_T2	PF00445	48 - 235	9.9e-50	Ribonuclease T2 family
DOMON	PF03351	307 - 380	8.7e-07	DOMON domain
Cytochrom_B561	PF03188	456 - 576	2.3e-07	Eukaryotic cytochrome b561

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005090)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07570
fragaria_vesca	FvH4_2g17300
malus_domestica	MD05G1151900.v1.1 MD10G1146200.v1.1
prunus_persica	Prupe.1G238000_v2.0.a1 Prupe.8G184600_v2.0.a1 Prupe.8G184600_v2.0.a1 Prupe.8G184600_v2.0.a1
pyrus_communis	pycom05g14640 pycom10g12600 pycom10g12610
rosa_chinensis	RchiOBHm_Chr6g0281811
rosa_laevigata	RLG00000012927
rosa_multiflora	Rmu_co8010262.1_g000001 Rmu_co8360785.1_g000001 Rmu_ssc0000126.1_g000040
rosa_roxburghii	Rroxscaffold_7G00186760
rosa_rugosa	Rorug06G0143700
rosa_samantha	Rh2AG280900 Rh3AG033700 Rh3BG033900 Rh3CG032600 Rh3DG033700 Rh6AG256800 Rh6BG260000 Rh6CG258900 Rh6DG251000 Rh7AG303800 Rh7CG322300
rosa_wichuraiana	Rw6G022250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	698, 973
Acc36I	ACCTGC	2 cut(s)	698, 973
Acc65I	GGTACC	1 cut(s)	1665
AccB1I	GGYRCC	1 cut(s)	1665
AccB7I	CCANNNNNTGG	2 cut(s)	470, 1192
AccBSI	CCGCTC	1 cut(s)	461
AccI	GTMKAC	2 cut(s)	1113, 1173
AccIII	TCCGGA	1 cut(s)	840
AciI	CCGC	3 cut(s)	59, 459, 1072
AclWI	GGATC	4 cut(s)	411, 424, 721, 1439
AcoI	YGGCCR	2 cut(s)	792, 1006
AcsI	RAATTY	3 cut(s)	235, 802, 973
AcuI	CTGAAG	1 cut(s)	1586
AfaI	GTAC	3 cut(s)	558, 1076, 1667
AfiI	CCNNNNNNNGG	7 cut(s)	168, 470, 587, 634, 1015, 1108, 1192
AflIII	ACRYGT	1 cut(s)	732
AgsI	TTSAA	4 cut(s)	80, 107, 691, 726
AjnI	CCWGG	3 cut(s)	21, 172, 934
AjuI	GAANNNNNNNTTGG	2 cut(s)	1130, 1162
AluBI	AGCT	8 cut(s)	291, 750, 771, 825, 869, 1547, 1568, 1772
AluI	AGCT	8 cut(s)	291, 750, 771, 825, 869, 1547, 1568, 1772
Alw21I	GWGCWC	3 cut(s)	1281, 1334, 1375
Alw26I	GTCTC	2 cut(s)	1297, 1558
AlwI	GGATC	4 cut(s)	411, 424, 721, 1439
AlwNI	CAGNNNCTG	2 cut(s)	470, 965
Ama87I	CYCGRG	1 cut(s)	696
Aor13HI	TCCGGA	1 cut(s)	840
ApeKI	GCWGC	6 cut(s)	35, 204, 222, 822, 866, 968
ApoI	RAATTY	3 cut(s)	235, 802, 973
Asp700I	GAANNNNTTC	1 cut(s)	614
Asp718I	GGTACC	1 cut(s)	1665
AspA2I	CCTAGG	1 cut(s)	1081
AspS9I	GGNCC	4 cut(s)	369, 945, 1020, 1232
AsuC2I	CCSGG	2 cut(s)	697, 698
AsuHPI	GGTGA	1 cut(s)	1618
AvaI	CYCGRG	1 cut(s)	696
AvaII	GGWCC	2 cut(s)	945, 1020
AvrII	CCTAGG	1 cut(s)	1081
BalI	TGGCCA	2 cut(s)	794, 1008
BamHI	GGATCC	1 cut(s)	416
BanI	GGYRCC	1 cut(s)	1665
BarI	GAAGNNNNNNTAC	2 cut(s)	1330, 1362
BbsI	GAAGAC	2 cut(s)	1155, 1592
Bbv12I	GWGCWC	3 cut(s)	1281, 1334, 1375
BbvI	GCAGC	6 cut(s)	22, 191, 209, 834, 878, 980
BccI	CCATC	5 cut(s)	278, 400, 1383, 1603, 1677
BciT130I	CCWGG	3 cut(s)	23, 174, 936
BcnI	CCSGG	2 cut(s)	697, 698
BcoDI	GTCTC	2 cut(s)	1297, 1558
BfaI	CTAG	4 cut(s)	717, 744, 1082, 1127
BfmI	CTRYAG	4 cut(s)	820, 966, 1251, 1264
BfuAI	ACCTGC	2 cut(s)	698, 973
BglII	AGATCT	1 cut(s)	333
BisI	GCNGC	7 cut(s)	36, 60, 205, 223, 823, 867, 969
BlnI	CCTAGG	1 cut(s)	1081
BlsI	GCNGC	7 cut(s)	37, 61, 206, 224, 824, 868, 970
Bme1390I	CCNGG	5 cut(s)	23, 174, 697, 698, 936
Bme18I	GGWCC	2 cut(s)	945, 1020
BmeT110I	CYCGRG	1 cut(s)	696
BmgT120I	GGNCC	4 cut(s)	369, 945, 1020, 1232
BmiI	GGNNCC	7 cut(s)	178, 418, 1021, 1124, 1184, 1364, 1667
BmrFI	CCNGG	5 cut(s)	23, 174, 697, 698, 936
BmrI	ACTGGG	1 cut(s)	1248
BmsI	GCATC	4 cut(s)	794, 853, 874, 1482
BmuI	ACTGGG	1 cut(s)	1248
BpiI	GAAGAC	2 cut(s)	1155, 1592
BpmI	CTGGAG	2 cut(s)	447, 492
BpuEI	CTTGAG	2 cut(s)	811, 982
BpuMI	CCSGG	2 cut(s)	697, 698
BsaI	GGTCTC	1 cut(s)	1297
BsaWI	WCCGGW	1 cut(s)	840
BsaXI	ACNNNNNCTCC	6 cut(s)	579, 609, 1277, 1307, 1404, 1434
Bsc4I	CCNNNNNNNGG	7 cut(s)	168, 470, 587, 634, 1015, 1108, 1192
Bse1I	ACTGG	9 cut(s)	57, 371, 464, 475, 795, 1023, 1186, 1243, 1661
Bse3DI	GCAATG	3 cut(s)	341, 993, 1009
BseAI	TCCGGA	1 cut(s)	840
BseBI	CCWGG	3 cut(s)	23, 174, 936
BseGI	GGATG	5 cut(s)	395, 909, 1394, 1473, 1601
BseLI	CCNNNNNNNGG	7 cut(s)	168, 470, 587, 634, 1015, 1108, 1192
BseMI	GCAATG	3 cut(s)	341, 993, 1009
BseMII	CTCAG	4 cut(s)	914, 928, 972, 1239
BseNI	ACTGG	9 cut(s)	57, 371, 464, 475, 795, 1023, 1186, 1243, 1661
BseRI	GAGGAG	1 cut(s)	1074
BseXI	GCAGC	6 cut(s)	22, 191, 209, 834, 878, 980
BsgI	GTGCAG	2 cut(s)	21, 726
BshNI	GGYRCC	1 cut(s)	1665
BsiHKAI	GWGCWC	3 cut(s)	1281, 1334, 1375
BsiHKCI	CYCGRG	1 cut(s)	696
BsiSI	CCGG	3 cut(s)	242, 697, 841
BslFI	GGGAC	2 cut(s)	463, 1102
BslI	CCNNNNNNNGG	7 cut(s)	168, 470, 587, 634, 1015, 1108, 1192
BsmAI	GTCTC	2 cut(s)	1297, 1558
BsmFI	GGGAC	2 cut(s)	463, 1102
BsmI	GAATGC	2 cut(s)	616, 1762
Bso31I	GGTCTC	1 cut(s)	1297
BsoBI	CYCGRG	1 cut(s)	696
Bsp1286I	GDGCHC	3 cut(s)	1281, 1334, 1375
Bsp13I	TCCGGA	1 cut(s)	840
Bsp143I	GATC	4 cut(s)	333, 416, 713, 1444
Bsp19I	CCATGG	3 cut(s)	259, 403, 1366
BspACI	CCGC	3 cut(s)	59, 459, 1072
BspCNI	CTCAG	4 cut(s)	913, 927, 971, 1238
BspEI	TCCGGA	1 cut(s)	840
BspHI	TCATGA	1 cut(s)	430
BspLI	GGNNCC	7 cut(s)	178, 418, 1021, 1124, 1184, 1364, 1667
BspMAI	CTGCAG	2 cut(s)	824, 970
BspMI	ACCTGC	2 cut(s)	698, 973
BspPI	GGATC	4 cut(s)	411, 424, 721, 1439
BspT107I	GGYRCC	1 cut(s)	1665
BspTNI	GGTCTC	1 cut(s)	1297
BsrBI	CCGCTC	1 cut(s)	461
BsrDI	GCAATG	3 cut(s)	341, 993, 1009
BsrI	ACTGG	9 cut(s)	57, 371, 464, 475, 795, 1023, 1186, 1243, 1661
BssMI	GATC	4 cut(s)	333, 416, 713, 1444
BssNAI	GTATAC	1 cut(s)	1174
BssT1I	CCWWGG	6 cut(s)	128, 259, 354, 403, 1081, 1366
Bst1107I	GTATAC	1 cut(s)	1174
Bst2UI	CCWGG	3 cut(s)	23, 174, 936
Bst4CI	ACNGT	2 cut(s)	185, 1171
Bst6I	CTCTTC	2 cut(s)	34, 308
BstAPI	GCANNNNNTGC	1 cut(s)	1757
BstC8I	GCNNGC	3 cut(s)	220, 293, 297
BstDEI	CTNAG	5 cut(s)	900, 914, 958, 1225, 1528
BstDSI	CCRYGG	4 cut(s)	259, 403, 1167, 1366
BstENI	CCTNNNNNAGG	2 cut(s)	585, 1106
BstF5I	GGATG	5 cut(s)	395, 909, 1394, 1473, 1601
BstKTI	GATC	4 cut(s)	336, 419, 716, 1447
BstMAI	GTCTC	2 cut(s)	1297, 1558
BstMBI	GATC	4 cut(s)	333, 416, 713, 1444
BstNI	CCWGG	3 cut(s)	23, 174, 936
BstNSI	RCATGY	1 cut(s)	736
BstSCI	CCNGG	5 cut(s)	21, 172, 695, 696, 934
BstSFI	CTRYAG	4 cut(s)	820, 966, 1251, 1264
BstV1I	GCAGC	6 cut(s)	22, 191, 209, 834, 878, 980
BstV2I	GAAGAC	2 cut(s)	1155, 1592
BstX2I	RGATCY	3 cut(s)	333, 416, 713
BstXI	CCANNNNNNTGG	1 cut(s)	942
BstYI	RGATCY	3 cut(s)	333, 416, 713
BstZ17I	GTATAC	1 cut(s)	1174
BtgI	CCRYGG	4 cut(s)	259, 403, 1167, 1366
BtgZI	GCGATG	1 cut(s)	897
BtsCI	GGATG	5 cut(s)	395, 909, 1394, 1473, 1601
BtsIMutI	CAGTG	3 cut(s)	788, 1030, 1373
BveI	ACCTGC	2 cut(s)	698, 973
Cac8I	GCNNGC	3 cut(s)	220, 293, 297
CaiI	CAGNNNCTG	2 cut(s)	470, 965
CciI	TCATGA	1 cut(s)	430
Cfr13I	GGNCC	4 cut(s)	369, 945, 1020, 1232
Cfr9I	CCCGGG	1 cut(s)	696
Csp6I	GTAC	3 cut(s)	557, 1075, 1666
CspCI	CAANNNNNGTGG	2 cut(s)	1086, 1121
CviQI	GTAC	3 cut(s)	557, 1075, 1666
DdeI	CTNAG	5 cut(s)	900, 914, 958, 1225, 1528
DpnI	GATC	4 cut(s)	335, 418, 715, 1446
DpnII	GATC	4 cut(s)	333, 416, 713, 1444
DraI	TTTAAA	1 cut(s)	517
EaeI	YGGCCR	2 cut(s)	792, 1006
Eam1104I	CTCTTC	2 cut(s)	34, 308
EarI	CTCTTC	2 cut(s)	34, 308
Eco130I	CCWWGG	6 cut(s)	128, 259, 354, 403, 1081, 1366
Eco31I	GGTCTC	1 cut(s)	1297
Eco47I	GGWCC	2 cut(s)	945, 1020
Eco57I	CTGAAG	1 cut(s)	1586
Eco88I	CYCGRG	1 cut(s)	696
EcoNI	CCTNNNNNAGG	2 cut(s)	585, 1106
EcoRI	GAATTC	1 cut(s)	802
EcoRII	CCWGG	3 cut(s)	21, 172, 934
EcoT14I	CCWWGG	6 cut(s)	128, 259, 354, 403, 1081, 1366
EcoT22I	ATGCAT	1 cut(s)	787
ErhI	CCWWGG	6 cut(s)	128, 259, 354, 403, 1081, 1366
FaqI	GGGAC	2 cut(s)	463, 1102
FauNDI	CATATG	1 cut(s)	781
FblI	GTMKAC	2 cut(s)	1113, 1173
Fnu4HI	GCNGC	7 cut(s)	36, 60, 205, 223, 823, 867, 969
FokI	GGATG	5 cut(s)	382, 896, 1401, 1460, 1608
Fsp4HI	GCNGC	7 cut(s)	36, 60, 205, 223, 823, 867, 969
FspBI	CTAG	4 cut(s)	717, 744, 1082, 1127
GluI	GCNGC	7 cut(s)	36, 60, 205, 223, 823, 867, 969
GsuI	CTGGAG	2 cut(s)	447, 492
HapII	CCGG	3 cut(s)	242, 697, 841
HincII	GTYRAC	3 cut(s)	188, 1114, 1272
HindII	GTYRAC	3 cut(s)	188, 1114, 1272
HinfI	GANTC	3 cut(s)	815, 896, 1725
HpaII	CCGG	3 cut(s)	242, 697, 841
HphI	GGTGA	1 cut(s)	1618
Hpy166II	GTNNAC	7 cut(s)	188, 252, 389, 758, 1114, 1174, 1272
Hpy188I	TCNGA	3 cut(s)	609, 917, 1692
Hpy188III	TCNNGA	4 cut(s)	431, 538, 841, 1808
Hpy8I	GTNNAC	7 cut(s)	188, 252, 389, 758, 1114, 1174, 1272
HpyAV	CCTTC	7 cut(s)	117, 570, 1156, 1353, 1472, 1677, 1736
HpyCH4III	ACNGT	2 cut(s)	185, 1171
HpyCH4IV	ACGT	1 cut(s)	525
HpyF3I	CTNAG	5 cut(s)	900, 914, 958, 1225, 1528
HpySE526I	ACGT	1 cut(s)	525
Kpn2I	TCCGGA	1 cut(s)	840
KpnI	GGTACC	1 cut(s)	1669
Kzo9I	GATC	4 cut(s)	333, 416, 713, 1444
LmnI	GCTCC	5 cut(s)	461, 466, 1362, 1370, 1769
Lsp1109I	GCAGC	6 cut(s)	22, 191, 209, 834, 878, 980
LweI	GCATC	4 cut(s)	794, 853, 874, 1482
MaeI	CTAG	4 cut(s)	717, 744, 1082, 1127
MaeII	ACGT	1 cut(s)	525
MaeIII	GTNAC	5 cut(s)	466, 526, 728, 905, 1427
MalI	GATC	4 cut(s)	335, 418, 715, 1446
MbiI	CCGCTC	1 cut(s)	461
MboI	GATC	4 cut(s)	333, 416, 713, 1444
MboII	GAAGA	6 cut(s)	21, 325, 1155, 1570, 1592, 1751
MflI	RGATCY	3 cut(s)	333, 416, 713
MhlI	GDGCHC	3 cut(s)	1281, 1334, 1375
MlsI	TGGCCA	2 cut(s)	794, 1008
MluNI	TGGCCA	2 cut(s)	794, 1008
Mox20I	TGGCCA	2 cut(s)	794, 1008
Mph1103I	ATGCAT	1 cut(s)	787
MroI	TCCGGA	1 cut(s)	840
MroXI	GAANNNNTTC	1 cut(s)	614
MscI	TGGCCA	2 cut(s)	794, 1008
MseI	TTAA	7 cut(s)	153, 377, 516, 1068, 1355, 1433, 1814
MslI	CAYNNNNRTG	3 cut(s)	986, 1400, 1586
Msp20I	TGGCCA	2 cut(s)	794, 1008
MspI	CCGG	3 cut(s)	242, 697, 841
MspR9I	CCNGG	5 cut(s)	23, 174, 697, 698, 936
Mva1269I	GAATGC	2 cut(s)	616, 1762
MvaI	CCWGG	3 cut(s)	23, 174, 936
NciI	CCSGG	2 cut(s)	697, 698
NcoI	CCATGG	3 cut(s)	259, 403, 1366
NdeI	CATATG	1 cut(s)	781
NdeII	GATC	4 cut(s)	333, 416, 713, 1444
NlaIV	GGNNCC	7 cut(s)	178, 418, 1021, 1124, 1184, 1364, 1667
NmeAIII	GCCGAG	1 cut(s)	251
NmuCI	GTSAC	3 cut(s)	526, 728, 1427
NsiI	ATGCAT	1 cut(s)	787
NspI	RCATGY	1 cut(s)	736
PagI	TCATGA	1 cut(s)	430
PaqCI	CACCTGC	2 cut(s)	698, 973
PciI	ACATGT	1 cut(s)	732
PctI	GAATGC	2 cut(s)	616, 1762
PdmI	GAANNNNTTC	1 cut(s)	614
PfeI	GAWTC	3 cut(s)	815, 896, 1725
PflFI	GACNNNGTC	2 cut(s)	1018, 1289
PflMI	CCANNNNNTGG	2 cut(s)	470, 1192
PkrI	GCNGC	7 cut(s)	37, 61, 206, 224, 824, 868, 970
PscI	ACATGT	1 cut(s)	732
Psp6I	CCWGG	3 cut(s)	21, 172, 934
PspGI	CCWGG	3 cut(s)	21, 172, 934
PspN4I	GGNNCC	7 cut(s)	178, 418, 1021, 1124, 1184, 1364, 1667
PspPI	GGNCC	4 cut(s)	369, 945, 1020, 1232
PstI	CTGCAG	2 cut(s)	824, 970
PstNI	CAGNNNCTG	2 cut(s)	470, 965
PsuI	RGATCY	3 cut(s)	333, 416, 713
PsyI	GACNNNGTC	2 cut(s)	1018, 1289
RsaI	GTAC	3 cut(s)	558, 1076, 1667
RsaNI	GTAC	3 cut(s)	557, 1075, 1666
RseI	CAYNNNNRTG	3 cut(s)	986, 1400, 1586
SalI	GTCGAC	1 cut(s)	1112
SaqAI	TTAA	7 cut(s)	153, 377, 516, 1068, 1355, 1433, 1814
SatI	GCNGC	7 cut(s)	36, 60, 205, 223, 823, 867, 969
Sau3AI	GATC	4 cut(s)	333, 416, 713, 1444
Sau96I	GGNCC	4 cut(s)	369, 945, 1020, 1232
ScrFI	CCNGG	5 cut(s)	23, 174, 697, 698, 936
SduI	GDGCHC	3 cut(s)	1281, 1334, 1375
SfaNI	GCATC	4 cut(s)	794, 853, 874, 1482
SfcI	CTRYAG	4 cut(s)	820, 966, 1251, 1264
SinI	GGWCC	2 cut(s)	945, 1020
SmaI	CCCGGG	1 cut(s)	698
SmiMI	CAYNNNNRTG	3 cut(s)	986, 1400, 1586
SmlI	CTYRAG	2 cut(s)	826, 997
SmoI	CTYRAG	2 cut(s)	826, 997
SsiI	CCGC	3 cut(s)	59, 459, 1072
SspMI	CTAG	4 cut(s)	717, 744, 1082, 1127
StyD4I	CCNGG	5 cut(s)	21, 172, 695, 696, 934
StyI	CCWWGG	6 cut(s)	128, 259, 354, 403, 1081, 1366
TaaI	ACNGT	2 cut(s)	185, 1171
TaiI	ACGT	1 cut(s)	528
TaqI	TCGA	5 cut(s)	1113, 1328, 1624, 1640, 1809
TaqII	GACCGA	1 cut(s)	1289
TauI	GCSGC	1 cut(s)	62
TfiI	GAWTC	3 cut(s)	815, 896, 1725
Tru1I	TTAA	7 cut(s)	153, 377, 516, 1068, 1355, 1433, 1814
Tru9I	TTAA	7 cut(s)	153, 377, 516, 1068, 1355, 1433, 1814
TscAI	CASTG	3 cut(s)	795, 1030, 1380
TseFI	GTSAC	3 cut(s)	526, 728, 1427
TseI	GCWGC	6 cut(s)	35, 204, 222, 822, 866, 968
Tsp45I	GTSAC	3 cut(s)	526, 728, 1427
TspDTI	ATGAA	8 cut(s)	339, 492, 558, 656, 1083, 1138, 1454, 1570
TspMI	CCCGGG	1 cut(s)	696
TspRI	CASTG	3 cut(s)	795, 1030, 1380
Tth111I	GACNNNGTC	2 cut(s)	1018, 1289
Van91I	CCANNNNNTGG	2 cut(s)	470, 1192
VpaK11BI	GGWCC	2 cut(s)	945, 1020
XagI	CCTNNNNNAGG	2 cut(s)	585, 1106
XapI	RAATTY	3 cut(s)	235, 802, 973
XceI	RCATGY	1 cut(s)	736
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1030, 1174, 1568
XmaI	CCCGGG	1 cut(s)	696
XmaJI	CCTAGG	1 cut(s)	1081
XmiI	GTMKAC	2 cut(s)	1113, 1173
XmnI	GAANNNNTTC	1 cut(s)	614
XspI	CTAG	4 cut(s)	717, 744, 1082, 1127
Zsp2I	ATGCAT	1 cut(s)	787

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.