60S ribosomal protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ribosomal_L14e | PF01929 | 45 - 117 | 2.3e-25 | Ribosomal protein L14 |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 1 cut(s) | 103 |
| AgsI | TTSAA | 4 cut(s) | 10, 145, 151, 325 |
| AluBI | AGCT | 7 cut(s) | 70, 261, 277, 299, 328, 373, 382 |
| AluI | AGCT | 7 cut(s) | 70, 261, 277, 299, 328, 373, 382 |
| Alw21I | GWGCWC | 1 cut(s) | 263 |
| ApeKI | GCWGC | 3 cut(s) | 218, 230, 299 |
| AspS9I | GGNCC | 1 cut(s) | 135 |
| AsuHPI | GGTGA | 2 cut(s) | 142, 157 |
| AvaII | GGWCC | 1 cut(s) | 135 |
| BanII | GRGCYC | 2 cut(s) | 109, 263 |
| BauI | CACGAG | 1 cut(s) | 262 |
| BbsI | GAAGAC | 1 cut(s) | 212 |
| Bbv12I | GWGCWC | 1 cut(s) | 263 |
| BbvI | GCAGC | 3 cut(s) | 205, 217, 286 |
| BceAI | ACGGC | 2 cut(s) | 67, 79 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 55, 89 |
| BisI | GCNGC | 3 cut(s) | 219, 231, 300 |
| BlsI | GCNGC | 3 cut(s) | 220, 232, 301 |
| Bme18I | GGWCC | 1 cut(s) | 135 |
| BmgT120I | GGNCC | 1 cut(s) | 135 |
| BmiI | GGNNCC | 2 cut(s) | 137, 195 |
| BmsI | GCATC | 1 cut(s) | 106 |
| BpiI | GAAGAC | 1 cut(s) | 212 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 24, 56, 245, 277, 288, 320 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 103 |
| Bse3DI | GCAATG | 1 cut(s) | 228 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 103 |
| BseMI | GCAATG | 1 cut(s) | 228 |
| BseXI | GCAGC | 3 cut(s) | 205, 217, 286 |
| BsgI | GTGCAG | 2 cut(s) | 285, 305 |
| BsiHKAI | GWGCWC | 1 cut(s) | 263 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 103 |
| Bsp1286I | GDGCHC | 2 cut(s) | 109, 263 |
| Bsp143I | GATC | 1 cut(s) | 342 |
| BspLI | GGNNCC | 2 cut(s) | 137, 195 |
| BspQI | GCTCTTC | 2 cut(s) | 251, 289 |
| BsrDI | GCAATG | 1 cut(s) | 228 |
| BssMI | GATC | 1 cut(s) | 342 |
| BssSI | CACGAG | 1 cut(s) | 262 |
| Bst2BI | CACGAG | 1 cut(s) | 262 |
| Bst6I | CTCTTC | 3 cut(s) | 251, 284, 289 |
| BstC8I | GCNNGC | 1 cut(s) | 68 |
| BstKTI | GATC | 1 cut(s) | 345 |
| BstMBI | GATC | 1 cut(s) | 342 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 227, 267, 283, 379 |
| BstV1I | GCAGC | 3 cut(s) | 205, 217, 286 |
| BstV2I | GAAGAC | 1 cut(s) | 212 |
| Cac8I | GCNNGC | 1 cut(s) | 68 |
| Cfr13I | GGNCC | 1 cut(s) | 135 |
| CviAII | CATG | 1 cut(s) | 127 |
| DpnI | GATC | 1 cut(s) | 344 |
| DpnII | GATC | 1 cut(s) | 342 |
| Eam1104I | CTCTTC | 3 cut(s) | 251, 284, 289 |
| EarI | CTCTTC | 3 cut(s) | 251, 284, 289 |
| Ecl136II | GAGCTC | 1 cut(s) | 261 |
| Eco24I | GRGCYC | 2 cut(s) | 109, 263 |
| Eco32I | GATATC | 1 cut(s) | 172 |
| Eco47I | GGWCC | 1 cut(s) | 135 |
| Eco53kI | GAGCTC | 1 cut(s) | 261 |
| EcoICRI | GAGCTC | 1 cut(s) | 261 |
| EcoO109I | RGGNCCY | 1 cut(s) | 135 |
| EcoRV | GATATC | 1 cut(s) | 172 |
| EcoT38I | GRGCYC | 2 cut(s) | 109, 263 |
| FaeI | CATG | 1 cut(s) | 130 |
| FaiI | YATR | 2 cut(s) | 128, 332 |
| FatI | CATG | 1 cut(s) | 126 |
| Fnu4HI | GCNGC | 3 cut(s) | 219, 231, 300 |
| FriOI | GRGCYC | 2 cut(s) | 109, 263 |
| Fsp4HI | GCNGC | 3 cut(s) | 219, 231, 300 |
| GluI | GCNGC | 3 cut(s) | 219, 231, 300 |
| Hin1II | CATG | 1 cut(s) | 130 |
| HincII | GTYRAC | 1 cut(s) | 46 |
| HindII | GTYRAC | 1 cut(s) | 46 |
| HindIII | AAGCTT | 1 cut(s) | 326 |
| HinfI | GANTC | 2 cut(s) | 208, 357 |
| HphI | GGTGA | 2 cut(s) | 142, 157 |
| Hpy166II | GTNNAC | 1 cut(s) | 46 |
| Hpy188I | TCNGA | 3 cut(s) | 198, 213, 404 |
| Hpy188III | TCNNGA | 2 cut(s) | 10, 346 |
| Hpy8I | GTNNAC | 1 cut(s) | 46 |
| Hpy99I | CGWCG | 3 cut(s) | 77, 86, 311 |
| HpyCH4IV | ACGT | 2 cut(s) | 18, 237 |
| HpyCH4V | TGCA | 5 cut(s) | 119, 221, 286, 302, 398 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 227, 267, 283, 379 |
| HpySE526I | ACGT | 2 cut(s) | 18, 237 |
| Hsp92II | CATG | 1 cut(s) | 130 |
| Kzo9I | GATC | 1 cut(s) | 342 |
| LguI | GCTCTTC | 2 cut(s) | 251, 289 |
| LmnI | GCTCC | 1 cut(s) | 370 |
| LpnPI | CCDG | 7 cut(s) | 88, 95, 135, 256, 339, 349, 353 |
| Lsp1109I | GCAGC | 3 cut(s) | 205, 217, 286 |
| LweI | GCATC | 1 cut(s) | 106 |
| MaeII | ACGT | 2 cut(s) | 18, 237 |
| MalI | GATC | 1 cut(s) | 344 |
| MboI | GATC | 1 cut(s) | 342 |
| MboII | GAAGA | 4 cut(s) | 217, 268, 301, 306 |
| MfeI | CAATTG | 1 cut(s) | 140 |
| MhlI | GDGCHC | 2 cut(s) | 109, 263 |
| MluCI | AATT | 1 cut(s) | 140 |
| MlyI | GAGTC | 1 cut(s) | 202 |
| MmeI | TCCRAC | 1 cut(s) | 7 |
| MnlI | CCTC | 4 cut(s) | 16, 126, 220, 342 |
| MunI | CAATTG | 1 cut(s) | 140 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 227, 267, 283, 379 |
| NdeII | GATC | 1 cut(s) | 342 |
| NlaIII | CATG | 1 cut(s) | 130 |
| NlaIV | GGNNCC | 2 cut(s) | 137, 195 |
| PciSI | GCTCTTC | 2 cut(s) | 251, 289 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 69, 78, 81, 90 |
| PfeI | GAWTC | 1 cut(s) | 357 |
| PkrI | GCNGC | 3 cut(s) | 220, 232, 301 |
| PleI | GAGTC | 1 cut(s) | 202 |
| PpsI | GAGTC | 1 cut(s) | 202 |
| PpuMI | RGGWCCY | 1 cut(s) | 135 |
| Psp124BI | GAGCTC | 1 cut(s) | 263 |
| Psp5II | RGGWCCY | 1 cut(s) | 135 |
| PspN4I | GGNNCC | 2 cut(s) | 137, 195 |
| PspPI | GGNCC | 1 cut(s) | 135 |
| PspPPI | RGGWCCY | 1 cut(s) | 135 |
| SacI | GAGCTC | 1 cut(s) | 263 |
| SapI | GCTCTTC | 2 cut(s) | 251, 289 |
| SatI | GCNGC | 3 cut(s) | 219, 231, 300 |
| Sau3AI | GATC | 1 cut(s) | 342 |
| Sau96I | GGNCC | 1 cut(s) | 135 |
| SchI | GAGTC | 1 cut(s) | 202 |
| SduI | GDGCHC | 2 cut(s) | 109, 263 |
| SfaNI | GCATC | 1 cut(s) | 106 |
| SinI | GGWCC | 1 cut(s) | 135 |
| Sse9I | AATT | 1 cut(s) | 140 |
| SstI | GAGCTC | 1 cut(s) | 263 |
| TaiI | ACGT | 2 cut(s) | 21, 240 |
| TaqI | TCGA | 4 cut(s) | 84, 93, 180, 306 |
| TasI | AATT | 1 cut(s) | 140 |
| TfiI | GAWTC | 1 cut(s) | 357 |
| TseI | GCWGC | 3 cut(s) | 218, 230, 299 |
| VpaK11BI | GGWCC | 1 cut(s) | 135 |