pycom05g20220

phosphoprotein phosphatase activity

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
23048286 .. 23049322
1037 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g20220.2

Sequence Viewer

Length: 192 bp
ATGGCCTCGAATCCGGAGAACGAACCTAGGGCCTCGAGAGAGGTCGAGAAGCCGCCGATTGAGCCCAGACGGCCACCTACGGTGGAGGAGGTGCGCGGCCAAGACATTTGGAGCAACTGCGCCGTCCGCAGTGTCGTTAGTGGAGTTATGGATGGAGCCCATCCGAAGTGGAAATCTGCCTCCCGGATTTGA

Protein Analysis

64

Amino Acids

7.02

Weight (kDa)

7.96

Isoelectric Point (pI)

58.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 96
AccIII TCCGGA 1 cut(s) 13
AciI CCGC 3 cut(s) 53, 96, 127
AcoI YGGCCR 2 cut(s) 71, 97
Ama87I CYCGRG 1 cut(s) 34
Aor13HI TCCGGA 1 cut(s) 13
AoxI GGCC 4 cut(s) 3, 30, 71, 97
AspA2I CCTAGG 1 cut(s) 26
AspLEI GCGC 2 cut(s) 96, 122
AspS9I GGNCC 1 cut(s) 30
AsuC2I CCSGG 1 cut(s) 184
AvaI CYCGRG 1 cut(s) 34
AvrII CCTAGG 1 cut(s) 26
BanII GRGCYC 2 cut(s) 66, 160
BccI CCATC 2 cut(s) 146, 168
BceAI ACGGC 2 cut(s) 86, 107
BcnI CCSGG 1 cut(s) 184
BfaI CTAG 1 cut(s) 27
BglI GCCNNNNNGGC 1 cut(s) 70
BisI GCNGC 2 cut(s) 53, 97
BlnI CCTAGG 1 cut(s) 26
BlsI GCNGC 2 cut(s) 54, 98
Bme1390I CCNGG 1 cut(s) 184
BmeT110I CYCGRG 1 cut(s) 34
BmgT120I GGNCC 1 cut(s) 30
BmiI GGNNCC 1 cut(s) 157
BmrFI CCNGG 1 cut(s) 184
BpuMI CCSGG 1 cut(s) 184
BsaJI CCNNGG 1 cut(s) 26
BsaWI WCCGGW 1 cut(s) 13
BseAI TCCGGA 1 cut(s) 13
BseDI CCNNGG 1 cut(s) 26
BseGI GGATG 2 cut(s) 157, 160
BseRI GAGGAG 1 cut(s) 101
Bsh1236I CGCG 1 cut(s) 96
BshFI GGCC 4 cut(s) 5, 32, 73, 99
BsiHKCI CYCGRG 1 cut(s) 34
BsiSI CCGG 2 cut(s) 14, 184
BsnI GGCC 4 cut(s) 5, 32, 73, 99
BsoBI CYCGRG 1 cut(s) 34
Bsp1286I GDGCHC 2 cut(s) 66, 160
Bsp13I TCCGGA 1 cut(s) 13
BspACI CCGC 3 cut(s) 53, 96, 127
BspANI GGCC 4 cut(s) 5, 32, 73, 99
BspEI TCCGGA 1 cut(s) 13
BspFNI CGCG 1 cut(s) 96
BspLI GGNNCC 1 cut(s) 157
BssECI CCNNGG 1 cut(s) 26
BssT1I CCWWGG 1 cut(s) 26
Bst4CI ACNGT 1 cut(s) 82
BstF5I GGATG 2 cut(s) 157, 160
BstFNI CGCG 1 cut(s) 96
BstHHI GCGC 2 cut(s) 96, 122
BstMWI GCNNNNNNNGC 3 cut(s) 61, 70, 126
BstSCI CCNGG 1 cut(s) 182
BstUI CGCG 1 cut(s) 96
BsuRI GGCC 4 cut(s) 5, 32, 73, 99
BtsCI GGATG 2 cut(s) 157, 160
BtsI GCAGTG 1 cut(s) 136
BtsIMutI CAGTG 1 cut(s) 136
CfoI GCGC 2 cut(s) 96, 122
Cfr13I GGNCC 1 cut(s) 30
CviJI RGCY 7 cut(s) 5, 32, 52, 64, 73, 99, 158
CviKI_1 RGCY 7 cut(s) 5, 32, 52, 64, 73, 99, 158
EaeI YGGCCR 2 cut(s) 71, 97
Eco130I CCWWGG 1 cut(s) 26
Eco24I GRGCYC 2 cut(s) 66, 160
Eco88I CYCGRG 1 cut(s) 34
EcoO109I RGGNCCY 1 cut(s) 30
EcoT14I CCWWGG 1 cut(s) 26
EcoT38I GRGCYC 2 cut(s) 66, 160
ErhI CCWWGG 1 cut(s) 26
FaiI YATR 1 cut(s) 149
Fnu4HI GCNGC 2 cut(s) 53, 97
FokI GGATG 2 cut(s) 147, 164
FriOI GRGCYC 2 cut(s) 66, 160
Fsp4HI GCNGC 2 cut(s) 53, 97
FspBI CTAG 1 cut(s) 27
GlaI GCGC 2 cut(s) 95, 121
GluI GCNGC 2 cut(s) 53, 97
HaeIII GGCC 4 cut(s) 5, 32, 73, 99
HapII CCGG 2 cut(s) 14, 184
HhaI GCGC 2 cut(s) 96, 122
Hin6I GCGC 2 cut(s) 94, 120
HinP1I GCGC 2 cut(s) 94, 120
HinfI GANTC 1 cut(s) 10
HpaII CCGG 2 cut(s) 14, 184
Hpy188I TCNGA 1 cut(s) 165
Hpy188III TCNNGA 3 cut(s) 14, 36, 46
HpyCH4III ACNGT 1 cut(s) 82
HpyF10VI GCNNNNNNNGC 3 cut(s) 61, 70, 126
HspAI GCGC 2 cut(s) 94, 120
Kpn2I TCCGGA 1 cut(s) 13
LmnI GCTCC 2 cut(s) 111, 155
LpnPI CCDG 2 cut(s) 27, 79
MaeI CTAG 1 cut(s) 27
MhlI GDGCHC 2 cut(s) 66, 160
MnlI CCTC 6 cut(s) 16, 34, 43, 79, 82, 190
MroI TCCGGA 1 cut(s) 13
MspI CCGG 2 cut(s) 14, 184
MspR9I CCNGG 1 cut(s) 184
MvnI CGCG 1 cut(s) 96
MwoI GCNNNNNNNGC 3 cut(s) 61, 70, 126
NciI CCSGG 1 cut(s) 184
NlaIV GGNNCC 1 cut(s) 157
PaeR7I CTCGAG 1 cut(s) 34
PfeI GAWTC 1 cut(s) 10
PfoI TCCNGGA 1 cut(s) 182
PkrI GCNGC 2 cut(s) 54, 98
PspN4I GGNNCC 1 cut(s) 157
PspPI GGNCC 1 cut(s) 30
SatI GCNGC 2 cut(s) 53, 97
Sau96I GGNCC 1 cut(s) 30
ScrFI CCNGG 1 cut(s) 184
SduI GDGCHC 2 cut(s) 66, 160
SetI ASST 4 cut(s) 28, 45, 79, 93
Sfr274I CTCGAG 1 cut(s) 34
SgeI CNNG 9 cut(s) 19, 26, 39, 46, 48, 58, 78, 107, 113
SlaI CTCGAG 1 cut(s) 34
SmlI CTYRAG 1 cut(s) 34
SmoI CTYRAG 1 cut(s) 34
SsiI CCGC 3 cut(s) 53, 96, 127
SspMI CTAG 1 cut(s) 27
StyD4I CCNGG 1 cut(s) 182
StyI CCWWGG 1 cut(s) 26
TaaI ACNGT 1 cut(s) 82
TaqI TCGA 3 cut(s) 8, 35, 45
TauI GCSGC 2 cut(s) 55, 99
TfiI GAWTC 1 cut(s) 10
TscAI CASTG 1 cut(s) 136
TspRI CASTG 1 cut(s) 136
XhoI CTCGAG 1 cut(s) 34
XmaJI CCTAGG 1 cut(s) 26
XspI CTAG 1 cut(s) 27
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.