pycom10g16990

phosphoprotein phosphatase activity

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
20177983 .. 20181657
3675 bp
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UTR
Exon/CDS
Intron
pycom10g16990.1

Sequence Viewer

Length: 597 bp
ATGAGAAAGAAGGAGAGAAAAAGGGGAGATGGATCGAGAAGCAAGGAAGGGGTTATCTCCGGTCGGGGATTATGGACCAGACCCATCATTCCCTTTTCCTTGGCTCCAAACTATGCCGTCGCAAGGGTTTCGCAGTTGGGAAGCCATGCTGAAGGAGAGGGAGACAGAGACAGAGACAGAGACAGAGTGAAAGAAAGAGGGGAAAAGGGAAGAGTGGGGATCTCAGCGCTATTGCTACAAATCCTTGATTTCATGAATGGGAGAGGGGGTACACTCAGAGAAAAGCATGGGGGTCGTTGGGATTTGAGGGAGAGGCGTAGGGATCGTGGCTGGGGGTCTGGGTTTGTCCCTTTGGCGAAGGGTGTGGGTTATGTTTTCAAGTCGCACACCCACCACCGCAAGGGTCCTGCTCGCTTCCGAAGTATGGGTTTAAAGGGAACAGTATGGGCTGCACAGAGAGAGGTCGAGAAGCTGCCAATTAAGCCTATACTGCCACCTACAGTGGAGGAGATGCGCGTCCAAGACATTTGGAACAACTGTGCCGTCCGCAGTGTCGTTAGTGGAGTTATGGTTAAGAACCCTAAATCGGACGGTTGA

Protein Analysis

199

Amino Acids

22.24

Weight (kDa)

11.01

Isoelectric Point (pI)

32.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 516
AciI CCGC 2 cut(s) 397, 547
AclWI GGATC 3 cut(s) 40, 227, 330
AcuI CTGAAG 1 cut(s) 171
AfaI GTAC 1 cut(s) 271
AfeI AGCGCT 1 cut(s) 228
AfiI CCNNNNNNNGG 4 cut(s) 123, 400, 424, 586
AgsI TTSAA 1 cut(s) 379
AluBI AGCT 1 cut(s) 472
AluI AGCT 1 cut(s) 472
Alw26I GTCTC 4 cut(s) 156, 162, 168, 174
AlwI GGATC 3 cut(s) 40, 227, 330
Aor51HI AGCGCT 1 cut(s) 228
ApeKI GCWGC 2 cut(s) 449, 472
AspLEI GCGC 2 cut(s) 229, 516
AspS9I GGNCC 2 cut(s) 75, 404
AvaII GGWCC 2 cut(s) 75, 404
BbvI GCAGC 2 cut(s) 436, 459
BccI CCATC 2 cut(s) 23, 92
BceAI ACGGC 2 cut(s) 101, 527
BcgI CGANNNNNNTGC 4 cut(s) 111, 145, 275, 309
BcoDI GTCTC 4 cut(s) 156, 162, 168, 174
BfmI CTRYAG 1 cut(s) 498
BfoI RGCGCY 1 cut(s) 230
BisI GCNGC 2 cut(s) 450, 473
BlsI GCNGC 2 cut(s) 451, 474
Bme18I GGWCC 2 cut(s) 75, 404
BmgT120I GGNCC 2 cut(s) 75, 404
BmiI GGNNCC 2 cut(s) 105, 405
BmsI GCATC 1 cut(s) 501
BsaJI CCNNGG 1 cut(s) 99
BsaWI WCCGGW 1 cut(s) 59
BsaXI ACNNNNNCTCC 4 cut(s) 253, 283, 555, 585
Bsc4I CCNNNNNNNGG 4 cut(s) 123, 400, 424, 586
BseDI CCNNGG 1 cut(s) 99
BseLI CCNNNNNNNGG 4 cut(s) 123, 400, 424, 586
BseMII CTCAG 2 cut(s) 237, 289
BseRI GAGGAG 1 cut(s) 521
BseXI GCAGC 2 cut(s) 436, 459
BseYI CCCAGC 1 cut(s) 330
BsgI GTGCAG 1 cut(s) 435
Bsh1236I CGCG 1 cut(s) 516
Bsh1285I CGRYCG 1 cut(s) 64
BsiEI CGRYCG 1 cut(s) 64
BsiSI CCGG 1 cut(s) 60
BslFI GGGAC 1 cut(s) 332
BslI CCNNNNNNNGG 4 cut(s) 123, 400, 424, 586
BsmAI GTCTC 4 cut(s) 156, 162, 168, 174
BsmFI GGGAC 1 cut(s) 332
Bsp143I GATC 3 cut(s) 32, 219, 322
BspACI CCGC 2 cut(s) 397, 547
BspCNI CTCAG 2 cut(s) 236, 288
BspFNI CGCG 1 cut(s) 516
BspHI TCATGA 1 cut(s) 252
BspLI GGNNCC 2 cut(s) 105, 405
BspPI GGATC 3 cut(s) 40, 227, 330
BssECI CCNNGG 1 cut(s) 99
BssMI GATC 3 cut(s) 32, 219, 322
BssT1I CCWWGG 1 cut(s) 99
Bst4CI ACNGT 4 cut(s) 442, 502, 539, 593
Bst6I CTCTTC 1 cut(s) 205
BstC8I GCNNGC 1 cut(s) 412
BstDEI CTNAG 2 cut(s) 223, 275
BstFNI CGCG 1 cut(s) 516
BstH2I RGCGCY 1 cut(s) 230
BstHHI GCGC 2 cut(s) 229, 516
BstKTI GATC 3 cut(s) 35, 222, 325
BstMAI GTCTC 4 cut(s) 156, 162, 168, 174
BstMBI GATC 3 cut(s) 32, 219, 322
BstMCI CGRYCG 1 cut(s) 64
BstMWI GCNNNNNNNGC 2 cut(s) 481, 490
BstSFI CTRYAG 1 cut(s) 498
BstUI CGCG 1 cut(s) 516
BstV1I GCAGC 2 cut(s) 436, 459
BstX2I RGATCY 1 cut(s) 219
BstYI RGATCY 1 cut(s) 219
BtsI GCAGTG 1 cut(s) 556
BtsIMutI CAGTG 2 cut(s) 507, 556
Cac8I GCNNGC 1 cut(s) 412
CciI TCATGA 1 cut(s) 252
CfoI GCGC 2 cut(s) 229, 516
Cfr13I GGNCC 2 cut(s) 75, 404
CseI GACGC 1 cut(s) 505
Csp6I GTAC 1 cut(s) 270
CviAII CATG 3 cut(s) 146, 253, 287
CviJI RGCY 6 cut(s) 104, 144, 330, 449, 472, 484
CviKI_1 RGCY 6 cut(s) 104, 144, 330, 449, 472, 484
CviQI GTAC 1 cut(s) 270
DdeI CTNAG 2 cut(s) 223, 275
DpnI GATC 3 cut(s) 34, 221, 324
DpnII GATC 3 cut(s) 32, 219, 322
DraI TTTAAA 1 cut(s) 432
Eam1104I CTCTTC 1 cut(s) 205
EarI CTCTTC 1 cut(s) 205
Eco130I CCWWGG 1 cut(s) 99
Eco47I GGWCC 2 cut(s) 75, 404
Eco47III AGCGCT 1 cut(s) 228
Eco57I CTGAAG 1 cut(s) 171
EcoO109I RGGNCCY 1 cut(s) 404
EcoT14I CCWWGG 1 cut(s) 99
ErhI CCWWGG 1 cut(s) 99
FaeI CATG 3 cut(s) 149, 256, 290
FaqI GGGAC 1 cut(s) 332
FatI CATG 3 cut(s) 145, 252, 286
Fnu4HI GCNGC 2 cut(s) 450, 473
Fsp4HI GCNGC 2 cut(s) 450, 473
GlaI GCGC 2 cut(s) 228, 515
GluI GCNGC 2 cut(s) 450, 473
GsaI CCCAGC 1 cut(s) 334
HaeII RGCGCY 1 cut(s) 230
HapII CCGG 1 cut(s) 60
HgaI GACGC 1 cut(s) 505
HhaI GCGC 2 cut(s) 229, 516
Hin1II CATG 3 cut(s) 149, 256, 290
Hin6I GCGC 2 cut(s) 227, 514
HinP1I GCGC 2 cut(s) 227, 514
HpaII CCGG 1 cut(s) 60
Hpy166II GTNNAC 1 cut(s) 272
Hpy188I TCNGA 3 cut(s) 278, 419, 589
Hpy188III TCNNGA 3 cut(s) 36, 253, 466
Hpy8I GTNNAC 1 cut(s) 272
Hpy99I CGWCG 1 cut(s) 122
HpyAV CCTTC 4 cut(s) 4, 41, 146, 352
HpyCH4III ACNGT 4 cut(s) 442, 502, 539, 593
HpyCH4V TGCA 1 cut(s) 452
HpyF10VI GCNNNNNNNGC 2 cut(s) 481, 490
HpyF3I CTNAG 2 cut(s) 223, 275
Hsp92II CATG 3 cut(s) 149, 256, 290
HspAI GCGC 2 cut(s) 227, 514
Kzo9I GATC 3 cut(s) 32, 219, 322
LmnI GCTCC 1 cut(s) 109
LpnPI CCDG 5 cut(s) 73, 91, 316, 324, 420
Lsp1109I GCAGC 2 cut(s) 436, 459
LweI GCATC 1 cut(s) 501
MalI GATC 3 cut(s) 34, 221, 324
MboI GATC 3 cut(s) 32, 219, 322
MboII GAAGA 1 cut(s) 222
MflI RGATCY 1 cut(s) 219
MluCI AATT 1 cut(s) 477
MnlI CCTC 7 cut(s) 151, 191, 257, 300, 306, 454, 499
MseI TTAA 3 cut(s) 431, 480, 573
MspI CCGG 1 cut(s) 60
MvnI CGCG 1 cut(s) 516
MwoI GCNNNNNNNGC 2 cut(s) 481, 490
NdeII GATC 3 cut(s) 32, 219, 322
NlaIII CATG 3 cut(s) 149, 256, 290
NlaIV GGNNCC 2 cut(s) 105, 405
PagI TCATGA 1 cut(s) 252
PkrI GCNGC 2 cut(s) 451, 474
PpuMI RGGWCCY 1 cut(s) 404
Psp5II RGGWCCY 1 cut(s) 404
PspFI CCCAGC 1 cut(s) 330
PspN4I GGNNCC 2 cut(s) 105, 405
PspPI GGNCC 2 cut(s) 75, 404
PspPPI RGGWCCY 1 cut(s) 404
PsuI RGATCY 1 cut(s) 219
RsaI GTAC 1 cut(s) 271
RsaNI GTAC 1 cut(s) 270
SaqAI TTAA 3 cut(s) 431, 480, 573
SatI GCNGC 2 cut(s) 450, 473
Sau3AI GATC 3 cut(s) 32, 219, 322
Sau96I GGNCC 2 cut(s) 75, 404
SetI ASST 3 cut(s) 465, 474, 499
SfaNI GCATC 1 cut(s) 501
SfcI CTRYAG 1 cut(s) 498
SinI GGWCC 2 cut(s) 75, 404
Sse9I AATT 1 cut(s) 477
SsiI CCGC 2 cut(s) 397, 547
StyI CCWWGG 1 cut(s) 99
TaaI ACNGT 4 cut(s) 442, 502, 539, 593
TaqI TCGA 2 cut(s) 35, 465
TasI AATT 1 cut(s) 477
Tru1I TTAA 3 cut(s) 431, 480, 573
Tru9I TTAA 3 cut(s) 431, 480, 573
TscAI CASTG 2 cut(s) 507, 556
TseI GCWGC 2 cut(s) 449, 472
TspDTI ATGAA 2 cut(s) 241, 269
TspRI CASTG 2 cut(s) 507, 556
VpaK11BI GGWCC 2 cut(s) 75, 404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.