pycom05g24210

Ras-related protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
25799815 .. 25801518
1704 bp
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UTR
Exon/CDS
Intron
pycom05g24210.1

Sequence Viewer

Length: 273 bp
ATGATGGTTAATTTGGTTTTGTTTTCGATTTCAGGAGATTGGGTTTTTCGAGTTTGTGACTTTTCTTTGAAGCCTGCGAAGACCTGTGTGTTTAAGGAGATCCGGTTTTTCGGGTTTCTGACGTTTCTTTGCAGCCTGCGAAGGCCTCTGTATTTAAGGAAATCGCCAATCCTGCAGACACTTTGGGTTTCCTGCTTTCTCACCAGAGATCTCCGCCATCACTGCTCCACCAAACTCGCTGATAGCGTCCACTCTCTCAAACCAGATCTTTGA

Protein Analysis

91

Amino Acids

10.54

Weight (kDa)

9.6

Isoelectric Point (pI)

41.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 214
AclWI GGATC 1 cut(s) 94
AgsI TTSAA 1 cut(s) 70
AlwI GGATC 1 cut(s) 94
AoxI GGCC 1 cut(s) 143
ApeKI GCWGC 1 cut(s) 132
AsuHPI GGTGA 1 cut(s) 193
BbsI GAAGAC 1 cut(s) 86
BbvI GCAGC 1 cut(s) 144
BccI CCATC 1 cut(s) 225
BfmI CTRYAG 1 cut(s) 173
BglII AGATCT 2 cut(s) 208, 265
BisI GCNGC 1 cut(s) 133
BlsI GCNGC 1 cut(s) 134
BpiI GAAGAC 1 cut(s) 86
BsaWI WCCGGW 1 cut(s) 102
BsaXI ACNNNNNCTCC 4 cut(s) 27, 57, 89, 119
BseXI GCAGC 1 cut(s) 144
BshFI GGCC 1 cut(s) 145
BsiSI CCGG 1 cut(s) 103
BsnI GGCC 1 cut(s) 145
Bsp143I GATC 3 cut(s) 99, 208, 265
BspACI CCGC 1 cut(s) 214
BspANI GGCC 1 cut(s) 145
BspMAI CTGCAG 1 cut(s) 177
BspPI GGATC 1 cut(s) 94
BssMI GATC 3 cut(s) 99, 208, 265
BstC8I GCNNGC 2 cut(s) 75, 137
BstKTI GATC 3 cut(s) 102, 211, 268
BstMBI GATC 3 cut(s) 99, 208, 265
BstMWI GCNNNNNNNGC 2 cut(s) 172, 222
BstSFI CTRYAG 1 cut(s) 173
BstV1I GCAGC 1 cut(s) 144
BstV2I GAAGAC 1 cut(s) 86
BstX2I RGATCY 3 cut(s) 99, 208, 265
BstYI RGATCY 3 cut(s) 99, 208, 265
BsuRI GGCC 1 cut(s) 145
BtsI GCAGTG 1 cut(s) 220
BtsIMutI CAGTG 1 cut(s) 220
Cac8I GCNNGC 2 cut(s) 75, 137
CseI GACGC 1 cut(s) 235
CviJI RGCY 3 cut(s) 73, 135, 145
CviKI_1 RGCY 3 cut(s) 73, 135, 145
DpnI GATC 3 cut(s) 101, 210, 267
DpnII GATC 3 cut(s) 99, 208, 265
EciI GGCGGA 1 cut(s) 203
Eco147I AGGCCT 1 cut(s) 145
Fnu4HI GCNGC 1 cut(s) 133
Fsp4HI GCNGC 1 cut(s) 133
GluI GCNGC 1 cut(s) 133
HaeIII GGCC 1 cut(s) 145
HapII CCGG 1 cut(s) 103
HgaI GACGC 1 cut(s) 235
HpaII CCGG 1 cut(s) 103
HphI GGTGA 1 cut(s) 193
Hpy166II GTNNAC 1 cut(s) 250
Hpy188I TCNGA 1 cut(s) 120
Hpy188III TCNNGA 1 cut(s) 33
Hpy8I GTNNAC 1 cut(s) 250
HpyAV CCTTC 1 cut(s) 135
HpyCH4IV ACGT 1 cut(s) 122
HpyCH4V TGCA 2 cut(s) 132, 175
HpyF10VI GCNNNNNNNGC 2 cut(s) 172, 222
HpySE526I ACGT 1 cut(s) 122
Kzo9I GATC 3 cut(s) 99, 208, 265
LmnI GCTCC 1 cut(s) 230
LpnPI CCDG 8 cut(s) 18, 87, 97, 116, 149, 185, 205, 217
Lsp1109I GCAGC 1 cut(s) 144
MaeII ACGT 1 cut(s) 122
MaeIII GTNAC 1 cut(s) 56
MalI GATC 3 cut(s) 101, 210, 267
MboI GATC 3 cut(s) 99, 208, 265
MboII GAAGA 1 cut(s) 91
MflI RGATCY 3 cut(s) 99, 208, 265
MluCI AATT 1 cut(s) 10
MnlI CCTC 1 cut(s) 156
MseI TTAA 3 cut(s) 9, 93, 155
MspI CCGG 1 cut(s) 103
MwoI GCNNNNNNNGC 2 cut(s) 172, 222
NdeII GATC 3 cut(s) 99, 208, 265
NmuCI GTSAC 1 cut(s) 56
PceI AGGCCT 1 cut(s) 145
PcsI WCGNNNNNNNCGW 1 cut(s) 243
PkrI GCNGC 1 cut(s) 134
PstI CTGCAG 1 cut(s) 177
PsuI RGATCY 3 cut(s) 99, 208, 265
SaqAI TTAA 3 cut(s) 9, 93, 155
SatI GCNGC 1 cut(s) 133
Sau3AI GATC 3 cut(s) 99, 208, 265
SetI ASST 2 cut(s) 86, 125
SfcI CTRYAG 1 cut(s) 173
Sse9I AATT 1 cut(s) 10
SseBI AGGCCT 1 cut(s) 145
SsiI CCGC 1 cut(s) 214
StuI AGGCCT 1 cut(s) 145
TaiI ACGT 1 cut(s) 125
TaqI TCGA 2 cut(s) 26, 49
TasI AATT 1 cut(s) 10
Tru1I TTAA 3 cut(s) 9, 93, 155
Tru9I TTAA 3 cut(s) 9, 93, 155
TscAI CASTG 1 cut(s) 227
TseFI GTSAC 1 cut(s) 56
TseI GCWGC 1 cut(s) 132
Tsp45I GTSAC 1 cut(s) 56
TspRI CASTG 1 cut(s) 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.