pycom05g31700

B-cell receptor-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0003828
Physical Location & Seq
Forward (+)
31337146 .. 31339029
1884 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 510 bp
ATGGTGGTGATGACCAACGTTTACAGCATAGTTAAGATCAGGGCGAGCCGGATCGATAAAGCTGCTGTTCTTAGTCCCACCGATCAGGTCCTCATGATCAAGCACCTTCTCGACGCCACTCTCATGGGATGCTCCCTATTTCTTGCTCTTATGATAGACAGACTACACCACTACATTAGAGAACTTCGTATACGCAGAAAGAGTATGGAAACCCTTAAGAAACAGAACAGAGGATCTGAGGATGGAAAATCTAGCATTTTGGATCAGATGAAAGTTTCGGAGAATGAGATGGCTACGTTGCGGACTAGACTCAAACAGCTAGAATCAGAAATCGAGACAAAGACGAAGGATGTTCATACTGCAGAGTCCAACGTCCTTGCTCTAAGAAAACAATCGGAAGGGTTTCTTCTCGAGTATGACCGCTTACTTGAAGAAAACCAAAAGTTAAAGAATCAGTTGAAGTCATTGGACTGGAGAGTGTCACGTTTAGGTAGCAAGAAAGATTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000139 GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005794 GO:0005795 GO:0005811 GO:0005886 GO:0005887 GO:0006810 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0007154 GO:0007165 GO:0007204 GO:0007276 GO:0007283 GO:0008104 GO:0008150 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009967 GO:0009987 GO:0010604 GO:0010646 GO:0010647 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012505 GO:0016020 GO:0016021 GO:0016192 GO:0019222 GO:0019722 GO:0019725 GO:0019932 GO:0019953 GO:0022414 GO:0023051 GO:0023052 GO:0023056 GO:0030003 GO:0030135 GO:0030136 GO:0030162 GO:0031090 GO:0031224 GO:0031226 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031410 GO:0031982 GO:0031984 GO:0031985 GO:0032268 GO:0032270 GO:0032386 GO:0032388 GO:0032434 GO:0032436 GO:0032469 GO:0032471 GO:0032501 GO:0032504 GO:0032580 GO:0032879 GO:0032880 GO:0033036 GO:0033157 GO:0033365 GO:0034613 GO:0035556 GO:0035584 GO:0042175 GO:0042176 GO:0042287 GO:0042288 GO:0042592 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043280 GO:0043281 GO:0044093 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0044703 GO:0044877 GO:0045732 GO:0045862 GO:0046907 GO:0048193 GO:0048232 GO:0048471 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048609 GO:0048878 GO:0050789 GO:0050790 GO:0050794 GO:0050801 GO:0050896 GO:0051049 GO:0051050 GO:0051171 GO:0051173 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051246 GO:0051247 GO:0051336 GO:0051345 GO:0051480 GO:0051560 GO:0051561 GO:0051641 GO:0051649 GO:0051704 GO:0051716 GO:0052547 GO:0052548 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0060255 GO:0060341 GO:0061136 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0070727 GO:0070861 GO:0070863 GO:0070972 GO:0070973 GO:0071944 GO:0072503 GO:0072507 GO:0080090 GO:0080134 GO:0080135 GO:0090087 GO:0090316 GO:0097038 GO:0097708 GO:0098588 GO:0098771 GO:0098791 GO:0098827 GO:1901800 GO:1902531 GO:1902533 GO:1903050 GO:1903052 GO:1903069 GO:1903071 GO:1903362 GO:1903364 GO:1903827 GO:1903829 GO:1904152 GO:1904154 GO:1904292 GO:1904294 GO:1904951 GO:1905897 GO:1905898 GO:2000058 GO:2000060 GO:2000116 GO:2001056 GO:2001233 GO:2001235 GO:2001242 GO:2001244
KEGG Pathways
Metabolic & Signaling
ko04141 ko05165 map04141 map05165
Pfam Domains
Protein Families
Bap31

Protein Analysis

170

Amino Acids

19.56

Weight (kDa)

9.65

Isoelectric Point (pI)

39.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Bap31_Bap29_C PF18035 104 - 150 9.9e-07 Bap31/Bap29 cytoplasmic coiled-coil domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 190
AciI CCGC 2 cut(s) 301, 421
AclI AACGTT 1 cut(s) 18
AclWI GGATC 3 cut(s) 59, 241, 270
AcyI GRCGYC 1 cut(s) 114
AflII CTTAAG 1 cut(s) 215
AgsI TTSAA 2 cut(s) 431, 460
AluBI AGCT 2 cut(s) 62, 319
AluI AGCT 2 cut(s) 62, 319
Alw26I GTCTC 1 cut(s) 329
AlwI GGATC 3 cut(s) 59, 241, 270
Ama87I CYCGRG 1 cut(s) 410
ApeKI GCWGC 1 cut(s) 62
Asp700I GAANNNNTTC 1 cut(s) 402
AspS9I GGNCC 1 cut(s) 88
AsuHPI GGTGA 1 cut(s) 19
AvaI CYCGRG 1 cut(s) 410
AvaII GGWCC 1 cut(s) 88
BbvI GCAGC 1 cut(s) 49
BccI CCATC 2 cut(s) 236, 283
BcgI CGANNNNNNTGC 2 cut(s) 44, 78
BclI TGATCA 1 cut(s) 96
BcoDI GTCTC 1 cut(s) 329
BfaI CTAG 3 cut(s) 252, 306, 320
BfmI CTRYAG 1 cut(s) 360
BfrI CTTAAG 1 cut(s) 215
BisI GCNGC 1 cut(s) 63
BlsI GCNGC 1 cut(s) 64
Bme18I GGWCC 1 cut(s) 88
BmeT110I CYCGRG 1 cut(s) 410
BmgT120I GGNCC 1 cut(s) 88
BmsI GCATC 1 cut(s) 119
BpmI CTGGAG 1 cut(s) 493
Bsa29I ATCGAT 1 cut(s) 54
BsaHI GRCGYC 1 cut(s) 114
Bse1I ACTGG 1 cut(s) 476
BseCI ATCGAT 1 cut(s) 54
BseGI GGATG 3 cut(s) 134, 247, 355
BseMII CTCAG 1 cut(s) 228
BseNI ACTGG 1 cut(s) 476
BseXI GCAGC 1 cut(s) 49
BshVI ATCGAT 1 cut(s) 54
BsiHKCI CYCGRG 1 cut(s) 410
BsiSI CCGG 1 cut(s) 49
BslFI GGGAC 1 cut(s) 60
BsmAI GTCTC 1 cut(s) 329
BsmFI GGGAC 1 cut(s) 60
BsoBI CYCGRG 1 cut(s) 410
Bsp143I GATC 6 cut(s) 36, 51, 82, 96, 233, 262
BspACI CCGC 2 cut(s) 301, 421
BspCNI CTCAG 1 cut(s) 229
BspDI ATCGAT 1 cut(s) 54
BspHI TCATGA 1 cut(s) 93
BspMAI CTGCAG 1 cut(s) 364
BspPI GGATC 3 cut(s) 59, 241, 270
BspTI CTTAAG 1 cut(s) 215
BsrI ACTGG 1 cut(s) 476
BssMI GATC 6 cut(s) 36, 51, 82, 96, 233, 262
BssNAI GTATAC 1 cut(s) 191
BssNI GRCGYC 1 cut(s) 114
Bst1107I GTATAC 1 cut(s) 191
BstACI GRCGYC 1 cut(s) 114
BstAFI CTTAAG 1 cut(s) 215
BstC8I GCNNGC 1 cut(s) 46
BstDEI CTNAG 3 cut(s) 71, 237, 383
BstF5I GGATG 3 cut(s) 134, 247, 355
BstKTI GATC 6 cut(s) 39, 54, 85, 99, 236, 265
BstMAI GTCTC 1 cut(s) 329
BstMBI GATC 6 cut(s) 36, 51, 82, 96, 233, 262
BstSFI CTRYAG 1 cut(s) 360
BstV1I GCAGC 1 cut(s) 49
BstX2I RGATCY 1 cut(s) 233
BstXI CCANNNNNNTGG 1 cut(s) 124
BstYI RGATCY 1 cut(s) 233
BstZ17I GTATAC 1 cut(s) 191
Bsu15I ATCGAT 1 cut(s) 54
BsuTUI ATCGAT 1 cut(s) 54
BtsCI GGATG 3 cut(s) 134, 247, 355
Cac8I GCNNGC 1 cut(s) 46
CciI TCATGA 1 cut(s) 93
Cfr13I GGNCC 1 cut(s) 88
ClaI ATCGAT 1 cut(s) 54
CseI GACGC 1 cut(s) 122
CviAII CATG 2 cut(s) 94, 124
CviJI RGCY 4 cut(s) 48, 62, 293, 319
CviKI_1 RGCY 4 cut(s) 48, 62, 293, 319
DdeI CTNAG 3 cut(s) 71, 237, 383
DpnI GATC 6 cut(s) 38, 53, 84, 98, 235, 264
DpnII GATC 6 cut(s) 36, 51, 82, 96, 233, 262
Eco47I GGWCC 1 cut(s) 88
Eco88I CYCGRG 1 cut(s) 410
EcoO109I RGGNCCY 1 cut(s) 88
FaeI CATG 2 cut(s) 97, 127
FaiI YATR 9 cut(s) 29, 95, 125, 152, 191, 206, 357, 417, 508
FalI AAGNNNNNCTT 2 cut(s) 390, 422
FaqI GGGAC 1 cut(s) 60
FatI CATG 2 cut(s) 93, 123
FbaI TGATCA 1 cut(s) 96
FblI GTMKAC 1 cut(s) 190
Fnu4HI GCNGC 1 cut(s) 63
FokI GGATG 3 cut(s) 141, 254, 362
Fsp4HI GCNGC 1 cut(s) 63
FspBI CTAG 3 cut(s) 252, 306, 320
GluI GCNGC 1 cut(s) 63
GsuI CTGGAG 1 cut(s) 493
HapII CCGG 1 cut(s) 49
HgaI GACGC 1 cut(s) 122
Hin1I GRCGYC 1 cut(s) 114
Hin1II CATG 2 cut(s) 97, 127
HinfI GANTC 5 cut(s) 309, 323, 365, 451, 503
HpaII CCGG 1 cut(s) 49
HphI GGTGA 1 cut(s) 19
Hpy166II GTNNAC 2 cut(s) 22, 191
Hpy188I TCNGA 5 cut(s) 238, 267, 280, 328, 397
Hpy188III TCNNGA 4 cut(s) 94, 110, 334, 410
Hpy8I GTNNAC 2 cut(s) 22, 191
Hpy99I CGWCG 1 cut(s) 116
HpyAV CCTTC 3 cut(s) 116, 340, 392
HpyCH4IV ACGT 4 cut(s) 18, 296, 372, 484
HpyCH4V TGCA 1 cut(s) 362
HpyF3I CTNAG 3 cut(s) 71, 237, 383
HpySE526I ACGT 4 cut(s) 18, 296, 372, 484
Hsp92I GRCGYC 1 cut(s) 114
Hsp92II CATG 2 cut(s) 97, 127
Ksp22I TGATCA 1 cut(s) 96
Kzo9I GATC 6 cut(s) 36, 51, 82, 96, 233, 262
LmnI GCTCC 1 cut(s) 137
LpnPI CCDG 4 cut(s) 25, 62, 71, 457
Lsp1109I GCAGC 1 cut(s) 49
LweI GCATC 1 cut(s) 119
MaeI CTAG 3 cut(s) 252, 306, 320
MaeII ACGT 4 cut(s) 18, 296, 372, 484
MaeIII GTNAC 1 cut(s) 480
MalI GATC 6 cut(s) 38, 53, 84, 98, 235, 264
MboI GATC 6 cut(s) 36, 51, 82, 96, 233, 262
MboII GAAGA 2 cut(s) 398, 443
MflI RGATCY 1 cut(s) 233
MlyI GAGTC 2 cut(s) 303, 374
MmeI TCCRAC 1 cut(s) 393
MnlI CCTC 3 cut(s) 101, 224, 232
MroXI GAANNNNTTC 1 cut(s) 402
MseI TTAA 3 cut(s) 33, 216, 446
MslI CAYNNNNRTG 1 cut(s) 122
MspCI CTTAAG 1 cut(s) 215
MspI CCGG 1 cut(s) 49
NdeII GATC 6 cut(s) 36, 51, 82, 96, 233, 262
NlaIII CATG 2 cut(s) 97, 127
NmuCI GTSAC 1 cut(s) 480
PaeR7I CTCGAG 1 cut(s) 410
PagI TCATGA 1 cut(s) 93
PdmI GAANNNNTTC 1 cut(s) 402
PfeI GAWTC 3 cut(s) 323, 451, 503
PkrI GCNGC 1 cut(s) 64
PleI GAGTC 2 cut(s) 303, 373
PpsI GAGTC 2 cut(s) 303, 373
PpuMI RGGWCCY 1 cut(s) 88
Psp1406I AACGTT 1 cut(s) 18
Psp5II RGGWCCY 1 cut(s) 88
PspPI GGNCC 1 cut(s) 88
PspPPI RGGWCCY 1 cut(s) 88
PsrI GAACNNNNNNTAC 2 cut(s) 174, 206
PstI CTGCAG 1 cut(s) 364
PsuI RGATCY 1 cut(s) 233
RseI CAYNNNNRTG 1 cut(s) 122
SaqAI TTAA 3 cut(s) 33, 216, 446
SatI GCNGC 1 cut(s) 63
Sau3AI GATC 6 cut(s) 36, 51, 82, 96, 233, 262
Sau96I GGNCC 1 cut(s) 88
SchI GAGTC 2 cut(s) 303, 374
SetI ASST 9 cut(s) 21, 64, 90, 108, 299, 321, 375, 487, 493
SfaNI GCATC 1 cut(s) 119
SfcI CTRYAG 1 cut(s) 360
Sfr274I CTCGAG 1 cut(s) 410
SinI GGWCC 1 cut(s) 88
SlaI CTCGAG 1 cut(s) 410
SmiMI CAYNNNNRTG 1 cut(s) 122
SmlI CTYRAG 2 cut(s) 215, 410
SmoI CTYRAG 2 cut(s) 215, 410
SsiI CCGC 2 cut(s) 301, 421
SspMI CTAG 3 cut(s) 252, 306, 320
TaiI ACGT 4 cut(s) 21, 299, 375, 487
TaqI TCGA 4 cut(s) 54, 111, 333, 411
TfiI GAWTC 3 cut(s) 323, 451, 503
Tru1I TTAA 3 cut(s) 33, 216, 446
Tru9I TTAA 3 cut(s) 33, 216, 446
TseFI GTSAC 1 cut(s) 480
TseI GCWGC 1 cut(s) 62
Tsp45I GTSAC 1 cut(s) 480
TspDTI ATGAA 3 cut(s) 284, 344, 495
Vha464I CTTAAG 1 cut(s) 215
VpaK11BI GGWCC 1 cut(s) 88
XhoI CTCGAG 1 cut(s) 410
XmiI GTMKAC 1 cut(s) 190
XmnI GAANNNNTTC 1 cut(s) 402
XspI CTAG 3 cut(s) 252, 306, 320
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.