pycom07g20740

sodium-coupled neutral amino acid transporter

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
22728067 .. 22730617
2551 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g20740.5

Sequence Viewer

Length: 1308 bp
ATGTCGCCGGCAGCCGAAGCCCACGTGCCACTGCTGCAGGACAGAAAGCCGGTGAGGCGGGGGTCTGTTTCAGGGGCCGTGTTCAACGTGTCCACGAGCATAATTGGTGCCGGAATCATGTCCATTCCGGCCACTCTCAAGGTGCTTGGTGTGATACCGGCTTTTGTGCTTATTGTGATCATTGCTTTGCTGGCTGACGTCTCGGTGGAGTTCCTGATGAGGTTCACGCATTCCGGCGAGTCCACGACGTATTCCGGCGTCATGAGGGAGTCCTTTGGGCAGGTGGGATCGGTTGCCACACAGATATGTGTCATGATTACTAATCTTGGGTGCTTAATTATGTACCAGATTATAATTGGGGATGTTCTATCTGGAAATGGGGCTGCCGGAGTTGGGCATTCCGGTGTTCTGCAAGAGTGGTTTGGAGTTCATTGGTGGAACTCACGTGATATTGCCCTCCTATTCACGCTTATTTTCATTTTCCTGCCACTGGTTTTGTTAAGGCGAGTAGAGTCTCTGCGGTTCAGTTCAGCCATATCAGTTCTTCTTGCTGTGGTTTTTGTTGGCATAAGTTCTGCCATGGCGATCTATGCAATCTTTGAAGGGAAAGTCAACACCCCAAGATTGTTACCAAGCTTGGGCAAACAAACCTCCTTCTTTGACCTTTTCACTGCTGTTCCAGTCATTGTTACAGCCTTCACTTTTCACTTCAACGTTCACCCAATTGGCTTCGAGCTTGGTAAGCCGTCTGATATGATATCAGCGGTCAGGATTTCACTGGTGCTCTGTGCAGCCATCTACTTCTCCATTGGACTGTTTGGGTACCTTTTGTTTGGGGATGCAATCGTGGCTGACATACTTGTGAATTTCGACAGAAGCTCAGATTCAGCAATGGGGGCAGTGCTGAATGATGCTGTCAGATTAAGCTACGCCCTCCATCTGATGTTGGTTTTTCCTCTCTTGAACTTTTCTCTGAGGGTAAATTTGGATGAACTGCTTTTCCCTCAAAAGCGGCTTTTGGCCACAGATAGTAGGAGATTTGTGCTCCTCACTCTTGGCCTGCTGGTTTTCTCTTACCTGGCTGCAATTGCCTTCCCAAACATTTGGTACATTTTTCAGTTTTTGGGATCAACTTCTGCTGTCTGCCTTGCCTTCATTTTCCCTGGTGCGATTGTTCTACGAGATGTACATGGCATATCTACAAGAACCGACAGGATCATGGCAACTGTGATGGTAGTCCTGGCAGTAGTAACAAGTGCAGTTGCCATTTCCATCAATGTATATAACTTTTTTGGGAACAAGTCCTAG

Protein Analysis

436

Amino Acids

47.17

Weight (kDa)

8.68

Isoelectric Point (pI)

29.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 353
AarI CACCTGC 1 cut(s) 271
AatII GACGTC 1 cut(s) 201
Acc36I ACCTGC 1 cut(s) 271
Acc65I GGTACC 1 cut(s) 822
AccB1I GGYRCC 2 cut(s) 107, 822
AciI CCGC 4 cut(s) 58, 520, 764, 1012
AclI AACGTT 1 cut(s) 714
AclWI GGATC 3 cut(s) 295, 1135, 1223
AcoI YGGCCR 2 cut(s) 129, 1020
AcsI RAATTY 2 cut(s) 865, 982
AcvI CACGTG 2 cut(s) 25, 446
AcyI GRCGYC 2 cut(s) 198, 258
AfaI GTAC 4 cut(s) 344, 824, 1109, 1188
AfiI CCNNNNNNNGG 3 cut(s) 393, 490, 638
AflIII ACRYGT 1 cut(s) 87
AgsI TTSAA 4 cut(s) 85, 602, 712, 964
AjnI CCWGG 3 cut(s) 1077, 1162, 1239
AloI GAACNNNNNNTCC 2 cut(s) 984, 1016
AluBI AGCT 4 cut(s) 636, 736, 879, 927
AluI AGCT 4 cut(s) 636, 736, 879, 927
Alw21I GWGCWC 2 cut(s) 786, 1047
Alw26I GTCTC 2 cut(s) 205, 519
AlwI GGATC 3 cut(s) 295, 1135, 1223
AoxI GGCC 4 cut(s) 75, 129, 1020, 1057
ApeKI GCWGC 5 cut(s) 11, 34, 383, 791, 1082
ApoI RAATTY 2 cut(s) 865, 982
Asp718I GGTACC 1 cut(s) 822
AspS9I GGNCC 1 cut(s) 75
AsuHPI GGTGA 2 cut(s) 64, 710
BalI TGGCCA 1 cut(s) 1022
BanI GGYRCC 2 cut(s) 107, 822
BauI CACGAG 1 cut(s) 94
BbrPI CACGTG 2 cut(s) 25, 446
Bbv12I GWGCWC 2 cut(s) 786, 1047
BbvI GCAGC 5 cut(s) 21, 23, 370, 803, 1069
BccI CCATC 4 cut(s) 803, 945, 1225, 1280
BceAI ACGGC 2 cut(s) 62, 730
BciT130I CCWGG 3 cut(s) 1079, 1164, 1241
BclI TGATCA 1 cut(s) 177
BcoDI GTCTC 2 cut(s) 205, 519
BfaI CTAG 1 cut(s) 1306
BfmI CTRYAG 1 cut(s) 35
BfuAI ACCTGC 1 cut(s) 271
BglI GCCNNNNNGGC 1 cut(s) 55
BisI GCNGC 6 cut(s) 12, 35, 384, 792, 1013, 1083
BlsI GCNGC 6 cut(s) 13, 36, 385, 793, 1014, 1084
Bme1390I CCNGG 3 cut(s) 1079, 1164, 1241
BmgT120I GGNCC 1 cut(s) 75
BmiI GGNNCC 3 cut(s) 76, 109, 824
BmrFI CCNGG 3 cut(s) 1079, 1164, 1241
BmsI GCATC 2 cut(s) 829, 901
BpuEI CTTGAG 1 cut(s) 122
BsaAI YACGTR 2 cut(s) 25, 446
BsaHI GRCGYC 2 cut(s) 198, 258
BsaJI CCNNGG 2 cut(s) 579, 1162
BsaWI WCCGGW 1 cut(s) 401
Bsc4I CCNNNNNNNGG 3 cut(s) 393, 490, 638
Bse118I RCCGGY 3 cut(s) 7, 49, 157
Bse1I ACTGG 3 cut(s) 495, 680, 783
Bse3DI GCAATG 2 cut(s) 180, 897
BseBI CCWGG 3 cut(s) 1079, 1164, 1241
BseDI CCNNGG 2 cut(s) 579, 1162
BseGI GGATG 3 cut(s) 367, 844, 994
BseLI CCNNNNNNNGG 3 cut(s) 393, 490, 638
BseMI GCAATG 2 cut(s) 180, 897
BseMII CTCAG 2 cut(s) 894, 965
BseNI ACTGG 3 cut(s) 495, 680, 783
BseRI GAGGAG 1 cut(s) 1037
BseXI GCAGC 5 cut(s) 21, 23, 370, 803, 1069
BsgI GTGCAG 2 cut(s) 810, 1278
BshFI GGCC 4 cut(s) 77, 131, 1022, 1059
BshNI GGYRCC 2 cut(s) 107, 822
BsiHKAI GWGCWC 2 cut(s) 786, 1047
BsiSI CCGG 9 cut(s) 8, 50, 111, 128, 158, 234, 255, 387, 402
BslI CCNNNNNNNGG 3 cut(s) 393, 490, 638
BsmAI GTCTC 2 cut(s) 205, 519
BsmBI CGTCTC 1 cut(s) 205
BsmI GAATGC 2 cut(s) 229, 397
BsnI GGCC 4 cut(s) 77, 131, 1022, 1059
Bsp1286I GDGCHC 2 cut(s) 786, 1047
Bsp1407I TGTACA 1 cut(s) 1186
Bsp143I GATC 5 cut(s) 177, 287, 585, 1127, 1215
Bsp19I CCATGG 1 cut(s) 579
BspACI CCGC 4 cut(s) 58, 520, 764, 1012
BspANI GGCC 4 cut(s) 77, 131, 1022, 1059
BspCNI CTCAG 2 cut(s) 893, 966
BspHI TCATGA 2 cut(s) 261, 312
BspLI GGNNCC 3 cut(s) 76, 109, 824
BspMAI CTGCAG 1 cut(s) 39
BspMI ACCTGC 1 cut(s) 271
BspPI GGATC 3 cut(s) 295, 1135, 1223
BspT107I GGYRCC 2 cut(s) 107, 822
BsrDI GCAATG 2 cut(s) 180, 897
BsrFI RCCGGY 3 cut(s) 7, 49, 157
BsrGI TGTACA 1 cut(s) 1186
BsrI ACTGG 3 cut(s) 495, 680, 783
BssAI RCCGGY 3 cut(s) 7, 49, 157
BssECI CCNNGG 2 cut(s) 579, 1162
BssMI GATC 5 cut(s) 177, 287, 585, 1127, 1215
BssNI GRCGYC 2 cut(s) 198, 258
BssSI CACGAG 1 cut(s) 94
BssT1I CCWWGG 1 cut(s) 579
Bst2BI CACGAG 1 cut(s) 94
Bst2UI CCWGG 3 cut(s) 1079, 1164, 1241
Bst4CI ACNGT 2 cut(s) 816, 1228
BstACI GRCGYC 2 cut(s) 198, 258
BstAUI TGTACA 1 cut(s) 1186
BstBAI YACGTR 2 cut(s) 25, 446
BstC8I GCNNGC 3 cut(s) 9, 192, 1061
BstDEI CTNAG 2 cut(s) 880, 974
BstDSI CCRYGG 1 cut(s) 579
BstF5I GGATG 3 cut(s) 367, 844, 994
BstKTI GATC 5 cut(s) 180, 290, 588, 1130, 1218
BstMAI GTCTC 2 cut(s) 205, 519
BstMBI GATC 5 cut(s) 177, 287, 585, 1127, 1215
BstMWI GCNNNNNNNGC 9 cut(s) 17, 34, 55, 191, 590, 742, 848, 896, 1088
BstNI CCWGG 3 cut(s) 1079, 1164, 1241
BstSCI CCNGG 3 cut(s) 1077, 1162, 1239
BstSFI CTRYAG 1 cut(s) 35
BstV1I GCAGC 5 cut(s) 21, 23, 370, 803, 1069
BstXI CCANNNNNNTGG 1 cut(s) 1104
BsuRI GGCC 4 cut(s) 77, 131, 1022, 1059
BtgI CCRYGG 1 cut(s) 579
BtsCI GGATG 3 cut(s) 367, 844, 994
BtsI GCAGTG 3 cut(s) 29, 669, 906
BtsIMutI CAGTG 5 cut(s) 29, 488, 669, 776, 906
BveI ACCTGC 1 cut(s) 271
Cac8I GCNNGC 3 cut(s) 9, 192, 1061
CciI TCATGA 2 cut(s) 261, 312
Cfr10I RCCGGY 3 cut(s) 7, 49, 157
Cfr13I GGNCC 1 cut(s) 75
CseI GACGC 1 cut(s) 247
Csp6I GTAC 4 cut(s) 343, 823, 1108, 1187
CspCI CAANNNNNGTGG 2 cut(s) 477, 512
CviAII CATG 6 cut(s) 118, 262, 313, 580, 1190, 1219
CviQI GTAC 4 cut(s) 343, 823, 1108, 1187
DdeI CTNAG 2 cut(s) 880, 974
DpnI GATC 5 cut(s) 179, 289, 587, 1129, 1217
DpnII GATC 5 cut(s) 177, 287, 585, 1127, 1215
EaeI YGGCCR 2 cut(s) 129, 1020
Eco130I CCWWGG 1 cut(s) 579
Eco32I GATATC 1 cut(s) 759
Eco72I CACGTG 2 cut(s) 25, 446
EcoRII CCWGG 3 cut(s) 1077, 1162, 1239
EcoRV GATATC 1 cut(s) 759
EcoT14I CCWWGG 1 cut(s) 579
ErhI CCWWGG 1 cut(s) 579
Esp3I CGTCTC 1 cut(s) 205
FaeI CATG 6 cut(s) 121, 265, 316, 583, 1193, 1222
FatI CATG 6 cut(s) 117, 261, 312, 579, 1189, 1218
FauI CCCGC 1 cut(s) 51
FbaI TGATCA 1 cut(s) 177
Fnu4HI GCNGC 6 cut(s) 12, 35, 384, 792, 1013, 1083
FokI GGATG 3 cut(s) 374, 851, 1001
Fsp4HI GCNGC 6 cut(s) 12, 35, 384, 792, 1013, 1083
FspBI CTAG 1 cut(s) 1306
GluI GCNGC 6 cut(s) 12, 35, 384, 792, 1013, 1083
HaeIII GGCC 4 cut(s) 77, 131, 1022, 1059
HapII CCGG 9 cut(s) 8, 50, 111, 128, 158, 234, 255, 387, 402
HgaI GACGC 1 cut(s) 247
Hin1I GRCGYC 2 cut(s) 198, 258
Hin1II CATG 6 cut(s) 121, 265, 316, 583, 1193, 1222
HincII GTYRAC 1 cut(s) 613
HindII GTYRAC 1 cut(s) 613
HindIII AAGCTT 1 cut(s) 634
HinfI GANTC 5 cut(s) 114, 239, 269, 512, 884
HpaII CCGG 9 cut(s) 8, 50, 111, 128, 158, 234, 255, 387, 402
HphI GGTGA 2 cut(s) 64, 710
Hpy166II GTNNAC 5 cut(s) 93, 225, 243, 613, 718
Hpy188I TCNGA 5 cut(s) 751, 883, 920, 942, 975
Hpy188III TCNNGA 6 cut(s) 214, 262, 313, 372, 769, 961
Hpy8I GTNNAC 5 cut(s) 93, 225, 243, 613, 718
Hpy99I CGWCG 1 cut(s) 250
HpyAV CCTTC 5 cut(s) 596, 664, 706, 1102, 1162
HpyCH4III ACNGT 2 cut(s) 816, 1228
HpyCH4IV ACGT 6 cut(s) 24, 87, 198, 248, 445, 714
HpyCH4V TGCA 7 cut(s) 37, 412, 593, 791, 842, 1085, 1259
HpyF10VI GCNNNNNNNGC 9 cut(s) 17, 34, 55, 191, 590, 742, 848, 896, 1088
HpyF3I CTNAG 2 cut(s) 880, 974
HpySE526I ACGT 6 cut(s) 24, 87, 198, 248, 445, 714
Hsp92I GRCGYC 2 cut(s) 198, 258
Hsp92II CATG 6 cut(s) 121, 265, 316, 583, 1193, 1222
KpnI GGTACC 1 cut(s) 826
KroI GCCGGC 1 cut(s) 7
KroNI GCCGGC 1 cut(s) 9
Ksp22I TGATCA 1 cut(s) 177
Kzo9I GATC 5 cut(s) 177, 287, 585, 1127, 1215
LmnI GCTCC 1 cut(s) 1050
Lsp1109I GCAGC 5 cut(s) 21, 23, 370, 803, 1069
LweI GCATC 2 cut(s) 829, 901
MaeI CTAG 1 cut(s) 1306
MaeII ACGT 6 cut(s) 24, 87, 198, 248, 445, 714
MaeIII GTNAC 3 cut(s) 627, 688, 1249
MalI GATC 5 cut(s) 179, 289, 587, 1129, 1217
MboI GATC 5 cut(s) 177, 287, 585, 1127, 1215
MboII GAAGA 1 cut(s) 536
MfeI CAATTG 2 cut(s) 723, 1086
MhlI GDGCHC 2 cut(s) 786, 1047
MlsI TGGCCA 1 cut(s) 1022
MluCI AATT 7 cut(s) 102, 336, 354, 723, 865, 982, 1086
MluNI TGGCCA 1 cut(s) 1022
MlyI GAGTC 3 cut(s) 248, 278, 521
Mox20I TGGCCA 1 cut(s) 1022
MroNI GCCGGC 1 cut(s) 7
MscI TGGCCA 1 cut(s) 1022
MseI TTAA 3 cut(s) 335, 500, 923
MslI CAYNNNNRTG 3 cut(s) 304, 402, 860
Msp20I TGGCCA 1 cut(s) 1022
MspA1I CMGCKG 1 cut(s) 764
MspI CCGG 9 cut(s) 8, 50, 111, 128, 158, 234, 255, 387, 402
MspR9I CCNGG 3 cut(s) 1079, 1164, 1241
MunI CAATTG 2 cut(s) 723, 1086
Mva1269I GAATGC 2 cut(s) 229, 397
MvaI CCWGG 3 cut(s) 1079, 1164, 1241
MwoI GCNNNNNNNGC 9 cut(s) 17, 34, 55, 191, 590, 742, 848, 896, 1088
NaeI GCCGGC 1 cut(s) 9
NcoI CCATGG 1 cut(s) 579
NdeII GATC 5 cut(s) 177, 287, 585, 1127, 1215
NgoMIV GCCGGC 1 cut(s) 7
NlaIII CATG 6 cut(s) 121, 265, 316, 583, 1193, 1222
NlaIV GGNNCC 3 cut(s) 76, 109, 824
PagI TCATGA 2 cut(s) 261, 312
PaqCI CACCTGC 1 cut(s) 271
PctI GAATGC 2 cut(s) 229, 397
PdiI GCCGGC 1 cut(s) 9
PfeI GAWTC 2 cut(s) 114, 884
PkrI GCNGC 6 cut(s) 13, 36, 385, 793, 1014, 1084
PleI GAGTC 3 cut(s) 247, 277, 520
PmaCI CACGTG 2 cut(s) 25, 446
PmlI CACGTG 2 cut(s) 25, 446
PpsI GAGTC 3 cut(s) 247, 277, 520
Ppu21I YACGTR 2 cut(s) 25, 446
PsiI TTATAA 1 cut(s) 353
Psp1406I AACGTT 1 cut(s) 714
Psp6I CCWGG 3 cut(s) 1077, 1162, 1239
PspCI CACGTG 2 cut(s) 25, 446
PspGI CCWGG 3 cut(s) 1077, 1162, 1239
PspN4I GGNNCC 3 cut(s) 76, 109, 824
PspPI GGNCC 1 cut(s) 75
PstI CTGCAG 1 cut(s) 39
RsaI GTAC 4 cut(s) 344, 824, 1109, 1188
RsaNI GTAC 4 cut(s) 343, 823, 1108, 1187
RseI CAYNNNNRTG 3 cut(s) 304, 402, 860
SaqAI TTAA 3 cut(s) 335, 500, 923
SatI GCNGC 6 cut(s) 12, 35, 384, 792, 1013, 1083
Sau3AI GATC 5 cut(s) 177, 287, 585, 1127, 1215
Sau96I GGNCC 1 cut(s) 75
SchI GAGTC 3 cut(s) 248, 278, 521
ScrFI CCNGG 3 cut(s) 1079, 1164, 1241
SduI GDGCHC 2 cut(s) 786, 1047
SfaNI GCATC 2 cut(s) 829, 901
SfcI CTRYAG 1 cut(s) 35
SmiMI CAYNNNNRTG 3 cut(s) 304, 402, 860
SmlI CTYRAG 1 cut(s) 137
SmoI CTYRAG 1 cut(s) 137
Sse9I AATT 7 cut(s) 102, 336, 354, 723, 865, 982, 1086
SsiI CCGC 4 cut(s) 58, 520, 764, 1012
SspMI CTAG 1 cut(s) 1306
StyD4I CCNGG 3 cut(s) 1077, 1162, 1239
StyI CCWWGG 1 cut(s) 579
TaaI ACNGT 2 cut(s) 816, 1228
TaiI ACGT 6 cut(s) 27, 90, 201, 251, 448, 717
TaqI TCGA 2 cut(s) 732, 870
TasI AATT 7 cut(s) 102, 336, 354, 723, 865, 982, 1086
TatI WGTACW 1 cut(s) 1186
TauI GCSGC 1 cut(s) 1015
TfiI GAWTC 2 cut(s) 114, 884
Tru1I TTAA 3 cut(s) 335, 500, 923
Tru9I TTAA 3 cut(s) 335, 500, 923
TscAI CASTG 5 cut(s) 36, 495, 676, 783, 906
TseI GCWGC 5 cut(s) 11, 34, 383, 791, 1082
TspDTI ATGAA 4 cut(s) 419, 466, 1005, 1144
TspRI CASTG 5 cut(s) 36, 495, 676, 783, 906
XapI RAATTY 2 cut(s) 865, 982
XcmI CCANNNNNNNNNTGG 1 cut(s) 353
XspI CTAG 1 cut(s) 1306
ZraI GACGTC 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.