Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0006213

Physical Location & Seq

Genomic Coordinates Forward (+)

25441197 .. 25445993

Gene Structure 4797 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g24930.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2388 bp

ATGGGGTTGGATTGGACATCACATACTCTCAAATTAAGAAGCAACGAGAAACGGCGCCGTCAACTGTTTTCCCATCCCCTCCTTTACTTCTTTCAGTCTCTGGAGTTGCAGAGATTAAGAGAGAGAGAAAGACCCAGAAGAAGACGAAGAAGAATTCGAATGGGAACTTCAGTTCAGGTAACGCCGTTGTGCGGCGTCTACAACGAGAATCCGCTGTCGTACTTGGTCTCAATCGACGGCTTCAACTTCCTCATCGACTGCGGCTGGAACGACCACTTCGACCCCTCCCTCCTTCAATCCCTCTCCAGGGTAGCTTCGACGGTGGATGCAGTGTTGTTGTCGCATCCAGATACACTTCACCTCGGCGCGCTTCCGTATGCCATGAAGCAGCTCGGCCTCTCTGCACCCGTCTTCTCCACCGAGCCGGTTTACAGATTAGGTCTCCTCACTATGTATGATCAGTTCCTCTCTCGCAAGCAAGTATCAGACTTTGACCTTTTTACACTGGATGACATTGATTCTGCATTCCAAAATTTCACCAGATTAACCTATGCTCAAAATCACCATCTTTCTGGCAAAGGAGAGGGAATTGTGATTTCACCCCATGTGTCTGGGCATCTCTTGGGTGGTACCGTCTGGAAGATAACAAAGGACGGGGAGGATGTTATATATGCTGTGGACTTCAACCATCGAAAAGAGAAGCATTTGAATGGAATTAATCAATCAGCCTTCGTACGCCCTGCTGTTCTGATAACAGATGCCTATAATGCTTTGAACAATCAGCCTTATAGACGCCAAAAGGACAAGGAATTTACAGATGCCATAAAGAAGACTCTACGATCTGATGGAAATGTGCTATTACCTGTTGATACTGCCGGTAGGGTTATGGAGCTCGTCCAGATATTGGAATCGGTAGGGGAGATGAAGGAAAATTTGAACCATCCCATCTTCTTTTTAACATATGTTGCATCTAGCACAATCGATTACGTAAAAAGTTTCCTTGAGTGGATGAGTGATGCGATAGCAAAGTCCTTTGAGAAAACACGTGAGAATGTTTTTAATTTGAAGCGAATCAGACTTCTAGTTAACAAGAGTGAACTTGATGATGCTCCTGATGGTCCCAAGGTTGTTTTAGCATCCATGGCCAGTTTAGAAGCTGGTTTCTCTCACGATATATTTGTAGAATGGGCAAATGACCCCAAGAATCTTGTCCTTTTTACAGAACGAGCCCAGTTTGGAAGTTTAGCTCGCATGCTTCAGGCAGATCCGCCTCCAAAAGCTGTTAAGGTTACTATATCCAAAAGGGTCCCTTTGGTTGGGGAGGAGCTAATTGCTTATGAAGAAGAGCAGAACAGAATAAGAAGGGAAGAAGCTCTAAGGGCTAGTCTTGTAAAAGAGGAGGAATCAAAAGCTTCTCATGGGGCTGATGTCAACACGAGTGATCGATCAATGATCATTGATGCTAGTAATACGCATTCTTTGCCGGATGCAGCAGGTCCACAAGGCAGTGGATACCGGGACATTTTCATAGATGGATTTACTCCTCCTTCTACCAGTGTTGCCCCTATGTTTCCCTTCTATGAGAATAGTACTGAGTGGGATGACTTTGGTGAAGTTATAAATCCGGATGATTATGTCATAAAGGATGAAGACATGGACCATGGAGCTATGCATGTTGGTGGTGATATGGATGGAAAACTTGATGAAGGCTCTGCTAGTTTGATACTTGACACAAGGCCTTCAAAAGTTGTATCGACTGAATTGACTGTTCAAGTGAAGTGTTCATTGATTTATATGGACTTTGAGGGCCGTTCCGATGCAAGATCCATCAAATCAATTCTTTCCCATATGGCTCCTCTAAAACTTGTTTTGGTTCATGGAACAGCTGAGGCCACAGAACATTTGAAGCAACACTGCTTGAAACACGTTTGTCCGCATGTTTATGCTCCTCAAATTGAAGAAACAATTGATGTTACTTCTGACTTATGCGCTTATAAGGTGCAATTGTCCGAGAAGTTAATGAGTAACGTGCTCTTTAAAAAGGTCGGAGATTACGAAATAGCTTGGGTTGACTCTGAGGCAGGAAAGACAGAAAATGATATGCTATCTTTACAACCCCTCTCAAACCCACCTCCACCACATGAATCTGTCCTTGTTGGTGACTTAAAAATGGCTAATTTCAAGCAATTTCTTTCAGACAAAGGTGTTCAGGCTGAATTTGCTGGTGGCGTGCTGAGATGCGGTGAATATGTGACATTACGCAAAGTTGGGGATGCAAGCCATAAGGGTGGTGGTTCCGGCACCCAACAAATTGTGATCGAAGGCCCCTTGTGTGAGGATTATTACAAGATTCGGGAGTATCTCTACTCACAATTTTATTTGCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005847 GO:0005849 GO:0005911 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009506 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0019222 GO:0030054 GO:0031047 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0035194 GO:0040029 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048519 GO:0050789 GO:0055044 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

Beta-Casp CPSF100_C Lactamase_B_6 RMMBL

Protein Analysis

796

Amino Acids

89.35

Weight (kDa)

5.67

Isoelectric Point (pI)

40.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006213)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23880
fragaria_vesca	FvH4_5g14450 FvH4_7g29660 FvH4_7g29660
malus_domestica	MD01G1203600.v1.1 MD07G1272900.v1.1
prunus_persica	Prupe.2G296200_v2.0.a1 Prupe.2G296200_v2.0.a1
pyrus_communis	pycom01g21270 pycom01g21280 pycom07g24930
rosa_chinensis	RchiOBHm_Chr1g0377671 RchiOBHm_Chr1g0377681 RchiOBHm_Chr1g0379161 RchiOBHm_Chr1g0379331
rosa_laevigata	RLG00000026506 RLG00000026773
rosa_multiflora	Rmu_sc0002832.1_g000015
rosa_roxburghii	Rroxscaffold_4G00281130
rosa_rugosa	Rorug01G0404200 Rorug01G0404300
rosa_samantha	Rh1AG428300 Rh1BG381000 Rh1CG000300 Rh1CG395000 Rh1DG412000
rosa_wichuraiana	Rw1G037040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1619, 1995
Acc36I	ACCTGC	1 cut(s)	1484
Acc65I	GGTACC	1 cut(s)	629
AccB1I	GGYRCC	3 cut(s)	54, 629, 2300
AccB7I	CCANNNNNTGG	1 cut(s)	904
AccI	GTMKAC	1 cut(s)	198
AccII	CGCG	1 cut(s)	368
AccIII	TCCGGA	1 cut(s)	1624
AciI	CCGC	6 cut(s)	192, 212, 261, 1268, 1934, 2241
AclWI	GGATC	2 cut(s)	1259, 1818
AcoI	YGGCCR	1 cut(s)	1143
AcsI	RAATTY	5 cut(s)	153, 532, 809, 931, 2216
AcuI	CTGAAG	2 cut(s)	153, 1241
AcvI	CACGTG	1 cut(s)	1046
AcyI	GRCGYC	3 cut(s)	55, 195, 793
AfaI	GTAC	4 cut(s)	221, 631, 735, 1591
AfiI	CCNNNNNNNGG	5 cut(s)	191, 306, 307, 904, 1316
AflIII	ACRYGT	2 cut(s)	1043, 1924
AjnI	CCWGG	1 cut(s)	305
AloI	GAACNNNNNNTCC	2 cut(s)	156, 188
Alw21I	GWGCWC	2 cut(s)	894, 2034
Alw26I	GTCTC	3 cut(s)	102, 232, 446
AlwI	GGATC	2 cut(s)	1259, 1818
AlwNI	CAGNNNCTG	1 cut(s)	100
Aor13HI	TCCGGA	1 cut(s)	1624
AoxI	GGCC	6 cut(s)	394, 1143, 1736, 1807, 1890, 2323
ApeKI	GCWGC	2 cut(s)	388, 1490
ApoI	RAATTY	5 cut(s)	153, 532, 809, 931, 2216
AseI	ATTAAT	1 cut(s)	717
Asp718I	GGTACC	1 cut(s)	629
AspLEI	GCGC	4 cut(s)	57, 368, 370, 1991
AspS9I	GGNCC	6 cut(s)	1118, 1306, 1496, 1657, 1807, 2324
AsuC2I	CCSGG	1 cut(s)	1517
AsuHPI	GGTGA	8 cut(s)	350, 529, 554, 591, 1622, 1694, 2171, 2255
AsuII	TTCGAA	1 cut(s)	157
AvaII	GGWCC	4 cut(s)	1118, 1306, 1496, 1657
BalI	TGGCCA	1 cut(s)	1145
BanI	GGYRCC	3 cut(s)	54, 629, 2300
BanII	GRGCYC	2 cut(s)	894, 1231
BauI	CACGAG	1 cut(s)	1435
BbrPI	CACGTG	1 cut(s)	1046
BbsI	GAAGAC	4 cut(s)	148, 403, 836, 1656
Bbv12I	GWGCWC	2 cut(s)	894, 2034
BbvCI	CCTCAGC	1 cut(s)	1887
BbvI	GCAGC	2 cut(s)	400, 1502
BceAI	ACGGC	5 cut(s)	42, 68, 169, 253, 1794
BciT130I	CCWGG	1 cut(s)	307
BciVI	GTATCC	1 cut(s)	1505
BclI	TGATCA	2 cut(s)	457, 1452
BcnI	CCSGG	1 cut(s)	1517
BcoDI	GTCTC	3 cut(s)	102, 232, 446
BfaI	CTAG	5 cut(s)	972, 1082, 1383, 1464, 1716
BfoI	RGCGCY	1 cut(s)	58
BfuAI	ACCTGC	1 cut(s)	1484
BfuI	GTATCC	1 cut(s)	1505
BisI	GCNGC	4 cut(s)	193, 262, 389, 1491
BlsI	GCNGC	4 cut(s)	194, 263, 390, 1492
BmcAI	AGTACT	1 cut(s)	1591
Bme1390I	CCNGG	2 cut(s)	307, 1517
Bme18I	GGWCC	4 cut(s)	1118, 1306, 1496, 1657
BmgT120I	GGNCC	6 cut(s)	1118, 1306, 1496, 1657, 1807, 2324
BmiI	GGNNCC	9 cut(s)	56, 631, 1120, 1307, 1308, 1854, 2296, 2302, 2326
BmrFI	CCNGG	2 cut(s)	307, 1517
BmrI	ACTGGG	1 cut(s)	1225
BmuI	ACTGGG	1 cut(s)	1225
BpiI	GAAGAC	4 cut(s)	148, 403, 836, 1656
BpmI	CTGGAG	2 cut(s)	122, 289
Bpu10I	CCTNAGC	1 cut(s)	1887
Bpu14I	TTCGAA	1 cut(s)	157
BpuEI	CTTGAG	1 cut(s)	1022
BpuMI	CCSGG	1 cut(s)	1517
Bsa29I	ATCGAT	2 cut(s)	981, 1444
BsaAI	YACGTR	2 cut(s)	988, 1046
BsaHI	GRCGYC	3 cut(s)	55, 195, 793
BsaI	GGTCTC	2 cut(s)	232, 446
BsaJI	CCNNGG	5 cut(s)	306, 361, 1122, 1140, 1660
BsaWI	WCCGGW	1 cut(s)	1624
Bsc4I	CCNNNNNNNGG	5 cut(s)	191, 306, 307, 904, 1316
Bse118I	RCCGGY	2 cut(s)	424, 875
Bse1I	ACTGG	4 cut(s)	510, 1146, 1231, 1554
BseAI	TCCGGA	1 cut(s)	1624
BseBI	CCWGG	1 cut(s)	307
BseCI	ATCGAT	2 cut(s)	981, 1444
BseDI	CCNNGG	5 cut(s)	306, 361, 1122, 1140, 1660
BseLI	CCNNNNNNNGG	5 cut(s)	191, 306, 307, 904, 1316
BseMII	CTCAG	4 cut(s)	1584, 1878, 2067, 2225
BseNI	ACTGG	4 cut(s)	510, 1146, 1231, 1554
BsePI	GCGCGC	1 cut(s)	366
BseRI	GAGGAG	6 cut(s)	434, 1337, 1412, 1533, 1845, 1938
BseXI	GCAGC	2 cut(s)	400, 1502
BsgI	GTGCAG	1 cut(s)	387
Bsh1236I	CGCG	1 cut(s)	368
BshFI	GGCC	6 cut(s)	396, 1145, 1738, 1809, 1892, 2325
BshNI	GGYRCC	3 cut(s)	54, 629, 2300
BshVI	ATCGAT	2 cut(s)	981, 1444
BsiHKAI	GWGCWC	2 cut(s)	894, 2034
BsiSI	CCGG	6 cut(s)	425, 876, 1484, 1516, 1625, 2298
BsiWI	CGTACG	1 cut(s)	733
BslFI	GGGAC	3 cut(s)	1104, 1292, 1532
BslI	CCNNNNNNNGG	5 cut(s)	191, 306, 307, 904, 1316
BsmAI	GTCTC	3 cut(s)	102, 232, 446
BsmFI	GGGAC	3 cut(s)	1104, 1292, 1532
BsmI	GAATGC	2 cut(s)	524, 1474
BsnI	GGCC	6 cut(s)	396, 1145, 1738, 1809, 1892, 2325
Bso31I	GGTCTC	2 cut(s)	232, 446
Bsp119I	TTCGAA	1 cut(s)	157
Bsp1286I	GDGCHC	3 cut(s)	894, 1231, 2034
Bsp13I	TCCGGA	1 cut(s)	1624
Bsp143I	GATC	8 cut(s)	457, 839, 1264, 1441, 1445, 1452, 1823, 2316
Bsp19I	CCATGG	2 cut(s)	1140, 1660
BspACI	CCGC	6 cut(s)	192, 212, 261, 1268, 1934, 2241
BspANI	GGCC	6 cut(s)	396, 1145, 1738, 1809, 1892, 2325
BspCNI	CTCAG	4 cut(s)	1585, 1879, 2068, 2226
BspDI	ATCGAT	2 cut(s)	981, 1444
BspEI	TCCGGA	1 cut(s)	1624
BspFNI	CGCG	1 cut(s)	368
BspLI	GGNNCC	9 cut(s)	56, 631, 1120, 1307, 1308, 1854, 2296, 2302, 2326
BspMI	ACCTGC	1 cut(s)	1484
BspPI	GGATC	2 cut(s)	1259, 1818
BspQI	GCTCTTC	1 cut(s)	1338
BspT104I	TTCGAA	1 cut(s)	157
BspT107I	GGYRCC	3 cut(s)	54, 629, 2300
BspTNI	GGTCTC	2 cut(s)	232, 446
BsrFI	RCCGGY	2 cut(s)	424, 875
BsrI	ACTGG	4 cut(s)	510, 1146, 1231, 1554
BssAI	RCCGGY	2 cut(s)	424, 875
BssECI	CCNNGG	5 cut(s)	306, 361, 1122, 1140, 1660
BssHII	GCGCGC	1 cut(s)	366
BssMI	GATC	8 cut(s)	457, 839, 1264, 1441, 1445, 1452, 1823, 2316
BssNI	GRCGYC	3 cut(s)	55, 195, 793
BssSI	CACGAG	1 cut(s)	1435
BssT1I	CCWWGG	3 cut(s)	1122, 1140, 1660
Bst2BI	CACGAG	1 cut(s)	1435
Bst2UI	CCWGG	1 cut(s)	307
Bst4CI	ACNGT	4 cut(s)	66, 322, 634, 1768
Bst6I	CTCTTC	1 cut(s)	1338
BstACI	GRCGYC	3 cut(s)	55, 195, 793
BstAPI	GCANNNNNTGC	1 cut(s)	1480
BstBAI	YACGTR	2 cut(s)	988, 1046
BstBI	TTCGAA	1 cut(s)	157
BstC8I	GCNNGC	6 cut(s)	368, 476, 1249, 1253, 2231, 2278
BstDEI	CTNAG	5 cut(s)	1376, 1593, 1887, 2076, 2234
BstDSI	CCRYGG	2 cut(s)	1140, 1660
BstFNI	CGCG	1 cut(s)	368
BstH2I	RGCGCY	1 cut(s)	58
BstHHI	GCGC	4 cut(s)	57, 368, 370, 1991
BstKTI	GATC	8 cut(s)	460, 842, 1267, 1444, 1448, 1455, 1826, 2319
BstMAI	GTCTC	3 cut(s)	102, 232, 446
BstMBI	GATC	8 cut(s)	457, 839, 1264, 1441, 1445, 1452, 1823, 2316
BstMWI	GCNNNNNNNGC	5 cut(s)	767, 1142, 1379, 1480, 2219
BstNI	CCWGG	1 cut(s)	307
BstNSI	RCATGY	3 cut(s)	1255, 1676, 1940
BstSCI	CCNGG	2 cut(s)	305, 1515
BstSNI	TACGTA	1 cut(s)	988
BstUI	CGCG	1 cut(s)	368
BstV1I	GCAGC	2 cut(s)	400, 1502
BstV2I	GAAGAC	4 cut(s)	148, 403, 836, 1656
BstX2I	RGATCY	2 cut(s)	1264, 1823
BstXI	CCANNNNNNTGG	3 cut(s)	572, 611, 2288
BstYI	RGATCY	2 cut(s)	1264, 1823
Bsu15I	ATCGAT	2 cut(s)	981, 1444
BsuI	GTATCC	1 cut(s)	1505
BsuRI	GGCC	6 cut(s)	396, 1145, 1738, 1809, 1892, 2325
BsuTUI	ATCGAT	2 cut(s)	981, 1444
BtgI	CCRYGG	2 cut(s)	1140, 1660
BtsI	GCAGTG	3 cut(s)	336, 1513, 1912
BtsIMutI	CAGTG	5 cut(s)	336, 503, 1513, 1561, 1912
BveI	ACCTGC	1 cut(s)	1484
Cac8I	GCNNGC	6 cut(s)	368, 476, 1249, 1253, 2231, 2278
CaiI	CAGNNNCTG	1 cut(s)	100
CfoI	GCGC	4 cut(s)	57, 368, 370, 1991
Cfr10I	RCCGGY	2 cut(s)	424, 875
Cfr13I	GGNCC	6 cut(s)	1118, 1306, 1496, 1657, 1807, 2324
ClaI	ATCGAT	2 cut(s)	981, 1444
CseI	GACGC	2 cut(s)	184, 801
Csp6I	GTAC	4 cut(s)	220, 630, 734, 1590
CviQI	GTAC	4 cut(s)	220, 630, 734, 1590
DdeI	CTNAG	5 cut(s)	1376, 1593, 1887, 2076, 2234
DinI	GGCGCC	1 cut(s)	56
DpnI	GATC	8 cut(s)	459, 841, 1266, 1443, 1447, 1454, 1825, 2318
DpnII	GATC	8 cut(s)	457, 839, 1264, 1441, 1445, 1452, 1823, 2316
DraI	TTTAAA	1 cut(s)	2038
EaeI	YGGCCR	1 cut(s)	1143
Eam1104I	CTCTTC	1 cut(s)	1338
EarI	CTCTTC	1 cut(s)	1338
EciI	GGCGGA	1 cut(s)	1257
Ecl136II	GAGCTC	1 cut(s)	892
Eco105I	TACGTA	1 cut(s)	988
Eco130I	CCWWGG	3 cut(s)	1122, 1140, 1660
Eco147I	AGGCCT	1 cut(s)	1738
Eco24I	GRGCYC	2 cut(s)	894, 1231
Eco31I	GGTCTC	2 cut(s)	232, 446
Eco47I	GGWCC	4 cut(s)	1118, 1306, 1496, 1657
Eco53kI	GAGCTC	1 cut(s)	892
Eco57I	CTGAAG	2 cut(s)	153, 1241
Eco72I	CACGTG	1 cut(s)	1046
EcoICRI	GAGCTC	1 cut(s)	892
EcoO109I	RGGNCCY	2 cut(s)	1306, 2324
EcoRI	GAATTC	1 cut(s)	153
EcoRII	CCWGG	1 cut(s)	305
EcoT14I	CCWWGG	3 cut(s)	1122, 1140, 1660
EcoT22I	ATGCAT	1 cut(s)	1674
EcoT38I	GRGCYC	2 cut(s)	894, 1231
EgeI	GGCGCC	1 cut(s)	56
EheI	GGCGCC	1 cut(s)	56
ErhI	CCWWGG	3 cut(s)	1122, 1140, 1660
FalI	AAGNNNNNCTT	2 cut(s)	1294, 1326
FaqI	GGGAC	3 cut(s)	1104, 1292, 1532
FauNDI	CATATG	2 cut(s)	961, 1848
FbaI	TGATCA	2 cut(s)	457, 1452
FblI	GTMKAC	1 cut(s)	198
Fnu4HI	GCNGC	4 cut(s)	193, 262, 389, 1491
FriOI	GRGCYC	2 cut(s)	894, 1231
Fsp4HI	GCNGC	4 cut(s)	193, 262, 389, 1491
FspBI	CTAG	5 cut(s)	972, 1082, 1383, 1464, 1716
GlaI	GCGC	4 cut(s)	56, 367, 369, 1990
GluI	GCNGC	4 cut(s)	193, 262, 389, 1491
GsuI	CTGGAG	2 cut(s)	122, 289
HaeII	RGCGCY	1 cut(s)	58
HaeIII	GGCC	6 cut(s)	396, 1145, 1738, 1809, 1892, 2325
HapII	CCGG	6 cut(s)	425, 876, 1484, 1516, 1625, 2298
HgaI	GACGC	2 cut(s)	184, 801
HhaI	GCGC	4 cut(s)	57, 368, 370, 1991
Hin1I	GRCGYC	3 cut(s)	55, 195, 793
Hin6I	GCGC	4 cut(s)	55, 366, 368, 1989
HinP1I	GCGC	4 cut(s)	55, 366, 368, 1989
HincII	GTYRAC	4 cut(s)	62, 1087, 1432, 2071
HindII	GTYRAC	4 cut(s)	62, 1087, 1432, 2071
HindIII	AAGCTT	1 cut(s)	1410
HpaI	GTTAAC	1 cut(s)	1087
HpaII	CCGG	6 cut(s)	425, 876, 1484, 1516, 1625, 2298
HphI	GGTGA	8 cut(s)	350, 529, 554, 591, 1622, 1694, 2171, 2255
Hpy166II	GTNNAC	9 cut(s)	62, 199, 430, 679, 1087, 1097, 1432, 1499, 2071
Hpy188III	TCNNGA	8 cut(s)	101, 347, 637, 898, 1112, 1169, 1625, 2354
Hpy8I	GTNNAC	9 cut(s)	62, 199, 430, 679, 1087, 1097, 1432, 1499, 2071
Hpy99I	CGWCG	2 cut(s)	239, 322
HpyAV	CCTTC	9 cut(s)	302, 739, 919, 1356, 1557, 1585, 1700, 1749, 2315
HpyCH4III	ACNGT	4 cut(s)	66, 322, 634, 1768
HpyCH4IV	ACGT	4 cut(s)	987, 1045, 1926, 2028
HpyF10VI	GCNNNNNNNGC	5 cut(s)	767, 1142, 1379, 1480, 2219
HpyF3I	CTNAG	5 cut(s)	1376, 1593, 1887, 2076, 2234
HpySE526I	ACGT	4 cut(s)	987, 1045, 1926, 2028
Hsp92I	GRCGYC	3 cut(s)	55, 195, 793
HspAI	GCGC	4 cut(s)	55, 366, 368, 1989
KasI	GGCGCC	1 cut(s)	54
KflI	GGGWCCC	1 cut(s)	1306
Kpn2I	TCCGGA	1 cut(s)	1624
KpnI	GGTACC	1 cut(s)	633
Ksp22I	TGATCA	2 cut(s)	457, 1452
KspAI	GTTAAC	1 cut(s)	1087
Kzo9I	GATC	8 cut(s)	457, 839, 1264, 1441, 1445, 1452, 1823, 2316
LguI	GCTCTTC	1 cut(s)	1338
LmnI	GCTCC	6 cut(s)	889, 1114, 1324, 1664, 1858, 1951
Lsp1109I	GCAGC	2 cut(s)	400, 1502
MaeI	CTAG	5 cut(s)	972, 1082, 1383, 1464, 1716
MaeII	ACGT	4 cut(s)	987, 1045, 1926, 2028
MaeIII	GTNAC	6 cut(s)	178, 1288, 1972, 2024, 2159, 2251
MalI	GATC	8 cut(s)	459, 841, 1266, 1443, 1447, 1454, 1825, 2318
MboI	GATC	8 cut(s)	457, 839, 1264, 1441, 1445, 1452, 1823, 2316
MfeI	CAATTG	2 cut(s)	1965, 2003
MflI	RGATCY	2 cut(s)	1264, 1823
MhlI	GDGCHC	3 cut(s)	894, 1231, 2034
MlsI	TGGCCA	1 cut(s)	1145
MluNI	TGGCCA	1 cut(s)	1145
Mly113I	GGCGCC	1 cut(s)	55
MlyI	GAGTC	2 cut(s)	826, 2066
MmeI	TCCRAC	1 cut(s)	2026
Mox20I	TGGCCA	1 cut(s)	1145
Mph1103I	ATGCAT	1 cut(s)	1674
MroI	TCCGGA	1 cut(s)	1624
MscI	TGGCCA	1 cut(s)	1145
MslI	CAYNNNNRTG	4 cut(s)	708, 1677, 1941, 2286
Msp20I	TGGCCA	1 cut(s)	1145
MspA1I	CMGCKG	2 cut(s)	214, 1886
MspI	CCGG	6 cut(s)	425, 876, 1484, 1516, 1625, 2298
MspR9I	CCNGG	2 cut(s)	307, 1517
MunI	CAATTG	2 cut(s)	1965, 2003
Mva1269I	GAATGC	2 cut(s)	524, 1474
MvaI	CCWGG	1 cut(s)	307
MvnI	CGCG	1 cut(s)	368
MwoI	GCNNNNNNNGC	5 cut(s)	767, 1142, 1379, 1480, 2219
NarI	GGCGCC	1 cut(s)	55
NciI	CCSGG	1 cut(s)	1517
NcoI	CCATGG	2 cut(s)	1140, 1660
NdeI	CATATG	2 cut(s)	961, 1848
NdeII	GATC	8 cut(s)	457, 839, 1264, 1441, 1445, 1452, 1823, 2316
NlaIV	GGNNCC	9 cut(s)	56, 631, 1120, 1307, 1308, 1854, 2296, 2302, 2326
NmeAIII	GCCGAG	2 cut(s)	342, 372
NmuCI	GTSAC	2 cut(s)	2159, 2251
NsiI	ATGCAT	1 cut(s)	1674
NspI	RCATGY	3 cut(s)	1255, 1676, 1940
NspV	TTCGAA	1 cut(s)	157
PaeI	GCATGC	1 cut(s)	1255
PauI	GCGCGC	1 cut(s)	366
PceI	AGGCCT	1 cut(s)	1738
PciSI	GCTCTTC	1 cut(s)	1338
PcsI	WCGNNNNNNNCGW	2 cut(s)	276, 2052
PctI	GAATGC	2 cut(s)	524, 1474
PfeI	GAWTC	8 cut(s)	208, 518, 908, 1071, 1204, 1403, 2144, 2350
Pfl23II	CGTACG	1 cut(s)	733
PflMI	CCANNNNNTGG	1 cut(s)	904
PkrI	GCNGC	4 cut(s)	194, 263, 390, 1492
PleI	GAGTC	2 cut(s)	826, 2066
PluTI	GGCGCC	1 cut(s)	58
PmaCI	CACGTG	1 cut(s)	1046
PmlI	CACGTG	1 cut(s)	1046
PpsI	GAGTC	2 cut(s)	826, 2066
Ppu21I	YACGTR	2 cut(s)	988, 1046
PpuMI	RGGWCCY	1 cut(s)	1306
PshBI	ATTAAT	1 cut(s)	717
PsiI	TTATAA	2 cut(s)	1619, 1995
Psp124BI	GAGCTC	1 cut(s)	894
Psp5II	RGGWCCY	1 cut(s)	1306
Psp6I	CCWGG	1 cut(s)	305
PspCI	CACGTG	1 cut(s)	1046
PspGI	CCWGG	1 cut(s)	305
PspLI	CGTACG	1 cut(s)	733
PspN4I	GGNNCC	9 cut(s)	56, 631, 1120, 1307, 1308, 1854, 2296, 2302, 2326
PspPI	GGNCC	6 cut(s)	1118, 1306, 1496, 1657, 1807, 2324
PspPPI	RGGWCCY	1 cut(s)	1306
PsrI	GAACNNNNNNTAC	2 cut(s)	446, 478
PstNI	CAGNNNCTG	1 cut(s)	100
PsuI	RGATCY	2 cut(s)	1264, 1823
PteI	GCGCGC	1 cut(s)	366
PvuII	CAGCTG	1 cut(s)	1886
RsaI	GTAC	4 cut(s)	221, 631, 735, 1591
RsaNI	GTAC	4 cut(s)	220, 630, 734, 1590
RseI	CAYNNNNRTG	4 cut(s)	708, 1677, 1941, 2286
SacI	GAGCTC	1 cut(s)	894
SapI	GCTCTTC	1 cut(s)	1338
SatI	GCNGC	4 cut(s)	193, 262, 389, 1491
Sau3AI	GATC	8 cut(s)	457, 839, 1264, 1441, 1445, 1452, 1823, 2316
Sau96I	GGNCC	6 cut(s)	1118, 1306, 1496, 1657, 1807, 2324
ScaI	AGTACT	1 cut(s)	1591
SchI	GAGTC	2 cut(s)	826, 2066
ScrFI	CCNGG	2 cut(s)	307, 1517
SduI	GDGCHC	3 cut(s)	894, 1231, 2034
SfoI	GGCGCC	1 cut(s)	56
SfuI	TTCGAA	1 cut(s)	157
SinI	GGWCC	4 cut(s)	1118, 1306, 1496, 1657
SmiMI	CAYNNNNRTG	4 cut(s)	708, 1677, 1941, 2286
SmlI	CTYRAG	1 cut(s)	1001
SmoI	CTYRAG	1 cut(s)	1001
SnaBI	TACGTA	1 cut(s)	988
SphI	GCATGC	1 cut(s)	1255
SseBI	AGGCCT	1 cut(s)	1738
SsiI	CCGC	6 cut(s)	192, 212, 261, 1268, 1934, 2241
SspDI	GGCGCC	1 cut(s)	54
SspMI	CTAG	5 cut(s)	972, 1082, 1383, 1464, 1716
SstI	GAGCTC	1 cut(s)	894
StuI	AGGCCT	1 cut(s)	1738
StyD4I	CCNGG	2 cut(s)	305, 1515
StyI	CCWWGG	3 cut(s)	1122, 1140, 1660
TaaI	ACNGT	4 cut(s)	66, 322, 634, 1768
TaiI	ACGT	4 cut(s)	990, 1048, 1929, 2031
TatI	WGTACW	1 cut(s)	1589
TauI	GCSGC	2 cut(s)	195, 264
TfiI	GAWTC	8 cut(s)	208, 518, 908, 1071, 1204, 1403, 2144, 2350
TscAI	CASTG	5 cut(s)	336, 510, 1513, 1561, 1919
TseFI	GTSAC	2 cut(s)	2159, 2251
TseI	GCWGC	2 cut(s)	388, 1490
Tsp45I	GTSAC	2 cut(s)	2159, 2251
TspDTI	ATGAA	9 cut(s)	398, 938, 1353, 1516, 1662, 1719, 1773, 1865, 2157
TspGWI	ACGGA	1 cut(s)	363
TspRI	CASTG	5 cut(s)	336, 510, 1513, 1561, 1919
Van91I	CCANNNNNTGG	1 cut(s)	904
VpaK11BI	GGWCC	4 cut(s)	1118, 1306, 1496, 1657
VspI	ATTAAT	1 cut(s)	717
XapI	RAATTY	5 cut(s)	153, 532, 809, 931, 2216
XceI	RCATGY	3 cut(s)	1255, 1676, 1940
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2288
XmiI	GTMKAC	1 cut(s)	198
XspI	CTAG	5 cut(s)	972, 1082, 1383, 1464, 1716
ZrmI	AGTACT	1 cut(s)	1591
Zsp2I	ATGCAT	1 cut(s)	1674

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.