Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0006213

Physical Location & Seq

Genomic Coordinates Reverse (-)

5801969 .. 5812839

Gene Structure 10871 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026773

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2352 bp

ATGGGAATCTGGCTCCTAGTCATTGTCACCACCCTTATGGTCTCATTTCTTGTCAGTAGTATTCTCGGTCTCAAGATCATAACCAGTAACCAACCTACTTTGTCATTTGTCTCCATCGACGGCTTCAACTTCCTCATCGACTGTGGCTGGAACGACCATTTCGACCCCTCCCTCCTCCAACCTCTCTCCAGAGTCGCTTCCACCGTAGACGCCGTCCTGTTATCACATCCCGACAGATTCCACCTCGACGCGCTTCCCTACGCCGCGAAACACCTCGGCCTCGCCGATCAGTACCTCTCCCGCAAGCAAGTTTCGGAGTTCGATTTGTTTACGCTGGATGATATTGATTCTGCTTTCCAAAATGTCACCAGGCTGACCAATGCTCAGCGTCATCATCTTACTGGAAAAGGAGAGGGAATTGTAATCTCGCCTCATGTGGCTGCGCATCTGTTGGGAGGAACTGTGTGGAAGATAACTAAGGATGGAGAGGATGTTATATATGCTGTGGACTTCAACCATCGAAAAGAAAAGCATTTGAATGGAATTAATCAGTCATCGTTTGTGCGGCCTGCTGTTCTAATAACGGATGCCTATAATGCTTTGAACAATCAGCCTTATAGACGCCTGAAGGACAGAGAATTTATAGGGACTAAAAGAAGACTCTACGATCTCAGGGAAATGTTTCACTACCTGTTGATACCTCTGGTGTTGGAACGAGGAAAGTTTGCCCTTTCCCATCTATTTCCTAACTACTTGTGTACCCCCAGACAGTTTGAAATTTTGAATCACTGGTTTTACATGAGCGAACTTGACAATGCTCCGGAAGGCCCAAAGGTTGTTTTAGCATCCATGGCCAATTTGGAAGCGGGTTTTTCTCACTATATATTTGTCGAATGGGCAACTGATGCCAAGAATCTTGTGCTTTTTACAGAACGAATTCAGGCAGACCCGCCTCCAAAAGCTGTTAAGCTAATTGCTTATGAAGAAGAGCAGAACAGAATTAAAAAGGAAGAAGCTCTAAAGGCTAGTCTGATTAAAAGAGGAGGAGTTAAAAGCTTCTCATGGGTGGTTATTGATACTAGCAATGCAGAGTCTTTGCCAGATGGAGCTTTTCTGATTCTATGTTATAGCAGTGGCTCCACGTGGTGGTGGATGCAGAGACATTTTAATCGATGCTTCTACCAGTGTTGCCGTATGATTCCCTTCTATGAAAATAATTCTGAGTGGGATGACTTTGGTGAAGTCATAAATCTGGACGATTATGTTATCAAGGATGAAGACATGAACCAAGGAGCAACGCTTGTTGGAGGTGATATGGATGGAAAAATTGACGGAGCCTCTGCTAGTTTAATACTCGACTCAAGGCCTTCGAAAGTTGTGTCAAGTGAATTGACTGTACCAGTGAAGTCTTGTATGGTTTTGGTTCATGGAACAGCTGAGGCCACTGAATATTTGAAGCAACACTGCTTGAAATATGTTTGCTCTCATGTTCAACTGTCCGAGAGGCTCATGAGTAACATAATCTTTAGGAAGGTAAGCATTCAAGTGTCAAGATTTATCTCATCTTGGTTCGATTCTGATGTAGGGAAGACAGAAGACGAAATGCTGTCTTTACTACCCTGCTCAACCCTAGCTCCACCACACAAACCAATCCTAGTCAGTGACTTAAAAATGGCCGATTTTAAGCAATTTCTTGCTGATGACGGTGTCCAGGTTGAATTTGCTGGTGGGGCTTTGCGATGTGGTGAATATGTGACAATACGCAAGGTTGGGGATGCAAGCCATAAGGGTGGTGGTGCTGTTTCGCAGCAAGTTGTGATTGAAGGACATGAAGGTCCAGCATCACGAAGTAAGGCAAAGCAGGAGAGGCTGAGCAAGGTGGACCAAAATGATGAATTTGTGTTGTCGTATGTTGATACGTTGTGGGATCTTCAGCTCCATGAGGAGAAGAGAAAACTTGAGGAAGGCGAAAGATCACCCAAGACATCATTTTGGATGGTTATGAGGTGCCCATTAATGCTACTGTCAATTTCAGTGGCTGATATAGGGTGGGACTCAAAAGTGTGGGAAGACCCAATGACTTTCAAGCCGGAGAGATTCTTGAGTGGTGGTGCAGGAGAAGGGGTTGATATAACAGGACATAGAGAGATTAAGATGATGCCTGTTGGGGCAGGGAGAAGAATTTGCCCCACTTCTGGTTTAGCCATGCTTCATCTCGAATATTTTGTGGCCAATCTGATTTGGAGGTTTGAATGGAAAGCTGTGGACGGAGCCAATGTGGACCTGTCGGAGAAGCAGGAGTTCACTGTGGTCATTAAGAATCCGTTGCAGGTCAACATATCTCAGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005847 GO:0005849 GO:0005911 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009506 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0019222 GO:0030054 GO:0031047 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0035194 GO:0040029 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048519 GO:0050789 GO:0055044 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

Beta-Casp CPSF100_C Lactamase_B_6 RMMBL

Protein Analysis

784

Amino Acids

88.42

Weight (kDa)

5.87

Isoelectric Point (pI)

37.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lactamase_B_6	PF16661	37 - 90	2.2e-09	Metallo-beta-lactamase superfamily domain
Lactamase_B_6	PF16661	95 - 191	5.7e-25	Metallo-beta-lactamase superfamily domain
Beta-Casp	PF10996	271 - 313	6.3e-09	Beta-Casp domain
CPSF100_C	PF13299	535 - 610	7.6e-11	Cleavage and polyadenylation factor 2 C-terminal
p450	PF00067	676 - 775	1.7e-15	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006213)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23880
fragaria_vesca	FvH4_5g14450 FvH4_7g29660 FvH4_7g29660
malus_domestica	MD01G1203600.v1.1 MD07G1272900.v1.1
prunus_persica	Prupe.2G296200_v2.0.a1 Prupe.2G296200_v2.0.a1
pyrus_communis	pycom01g21270 pycom01g21280 pycom07g24930
rosa_chinensis	RchiOBHm_Chr1g0377671 RchiOBHm_Chr1g0377681 RchiOBHm_Chr1g0379161 RchiOBHm_Chr1g0379331
rosa_laevigata	RLG00000026506 RLG00000026773
rosa_multiflora	Rmu_sc0002832.1_g000015
rosa_roxburghii	Rroxscaffold_4G00281130
rosa_rugosa	Rorug01G0404200 Rorug01G0404300
rosa_samantha	Rh1AG428300 Rh1BG381000 Rh1CG000300 Rh1CG395000 Rh1DG412000
rosa_wichuraiana	Rw1G037040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1833
Acc16I	TGCGCA	1 cut(s)	444
Acc36I	ACCTGC	1 cut(s)	2320
AccB1I	GGYRCC	1 cut(s)	2007
AccB7I	CCANNNNNTGG	1 cut(s)	1146
AccI	GTMKAC	1 cut(s)	207
AccII	CGCG	2 cut(s)	251, 266
AccIII	TCCGGA	1 cut(s)	820
AciI	CCGC	5 cut(s)	264, 301, 565, 866, 950
AclWI	GGATC	1 cut(s)	1935
AcoI	YGGCCR	3 cut(s)	852, 1674, 2229
AcsI	RAATTY	6 cut(s)	638, 777, 936, 1718, 1895, 2181
AcuI	CTGAAG	2 cut(s)	647, 1916
AcvI	CACGTG	1 cut(s)	1143
AcyI	GRCGYC	2 cut(s)	210, 622
AdeI	CACNNNGTG	1 cut(s)	1146
AfaI	GTAC	3 cut(s)	293, 760, 1398
AfiI	CCNNNNNNNGG	2 cut(s)	1146, 2195
AjnI	CCWGG	2 cut(s)	368, 1710
AluBI	AGCT	9 cut(s)	962, 970, 1016, 1056, 1109, 1436, 1634, 1936, 2261
AluI	AGCT	9 cut(s)	962, 970, 1016, 1056, 1109, 1436, 1634, 1936, 2261
Alw26I	GTCTC	4 cut(s)	46, 74, 115, 1153
AlwI	GGATC	1 cut(s)	1935
AlwNI	CAGNNNCTG	1 cut(s)	2039
Aor13HI	TCCGGA	1 cut(s)	820
AoxI	GGCC	8 cut(s)	277, 566, 826, 852, 1364, 1440, 1674, 2229
ApeKI	GCWGC	2 cut(s)	440, 1807
ApoI	RAATTY	6 cut(s)	638, 777, 936, 1718, 1895, 2181
ArsI	GACNNNNNNTTYG	2 cut(s)	1364, 1396
AseI	ATTAAT	2 cut(s)	546, 2015
Asp700I	GAANNNNTTC	2 cut(s)	681, 936
AspLEI	GCGC	2 cut(s)	253, 445
AspS9I	GGNCC	4 cut(s)	827, 1835, 1882, 2281
AsuHPI	GGTGA	6 cut(s)	19, 358, 1250, 1322, 1757, 1968
AsuII	TTCGAA	1 cut(s)	1370
AvaII	GGWCC	3 cut(s)	1835, 1882, 2281
BaeGI	GKGCMC	1 cut(s)	2012
BaeI	ACNNNNGTAYC	2 cut(s)	742, 775
BalI	TGGCCA	2 cut(s)	854, 2231
BanI	GGYRCC	1 cut(s)	2007
BbrPI	CACGTG	1 cut(s)	1143
BbsI	GAAGAC	5 cut(s)	664, 1284, 1595, 1602, 2076
BbvCI	CCTCAGC	1 cut(s)	1437
BbvI	GCAGC	2 cut(s)	427, 1819
BccI	CCATC	7 cut(s)	122, 476, 525, 744, 1097, 1313, 1990
BceAI	ACGGC	3 cut(s)	136, 197, 1176
BciT130I	CCWGG	2 cut(s)	370, 1712
BcoDI	GTCTC	4 cut(s)	46, 74, 115, 1153
BfaI	CTAG	6 cut(s)	17, 1026, 1080, 1344, 1631, 1655
BfuAI	ACCTGC	1 cut(s)	2320
BisI	GCNGC	4 cut(s)	264, 441, 566, 1808
BlpI	GCTNAGC	2 cut(s)	384, 1871
BlsI	GCNGC	4 cut(s)	265, 442, 567, 1809
Bme1390I	CCNGG	2 cut(s)	370, 1712
Bme18I	GGWCC	3 cut(s)	1835, 1882, 2281
BmgT120I	GGNCC	4 cut(s)	827, 1835, 1882, 2281
BmiI	GGNNCC	5 cut(s)	14, 1138, 1336, 2009, 2272
BmrFI	CCNGG	2 cut(s)	370, 1712
BmsI	GCATC	9 cut(s)	454, 577, 854, 895, 1143, 1163, 1765, 1850, 2148
BpiI	GAAGAC	5 cut(s)	664, 1284, 1595, 1602, 2076
BpmI	CTGGAG	1 cut(s)	172
Bpu10I	CCTNAGC	1 cut(s)	1437
Bpu1102I	GCTNAGC	2 cut(s)	384, 1871
Bpu14I	TTCGAA	1 cut(s)	1370
BpuEI	CTTGAG	4 cut(s)	56, 1345, 1979, 2122
Bsa29I	ATCGAT	1 cut(s)	1171
BsaAI	YACGTR	1 cut(s)	1143
BsaHI	GRCGYC	2 cut(s)	210, 622
BsaI	GGTCTC	2 cut(s)	46, 74
BsaJI	CCNNGG	3 cut(s)	274, 849, 1288
BsaWI	WCCGGW	1 cut(s)	820
Bsc4I	CCNNNNNNNGG	2 cut(s)	1146, 2195
Bse1I	ACTGG	5 cut(s)	84, 406, 794, 1183, 1400
Bse3DI	GCAATG	1 cut(s)	1090
BseAI	TCCGGA	1 cut(s)	820
BseBI	CCWGG	2 cut(s)	370, 1712
BseCI	ATCGAT	1 cut(s)	1171
BseDI	CCNNGG	3 cut(s)	274, 849, 1288
BseLI	CCNNNNNNNGG	2 cut(s)	1146, 2195
BseMI	GCAATG	1 cut(s)	1090
BseMII	CTCAG	5 cut(s)	398, 685, 1212, 1428, 1862
BseNI	ACTGG	5 cut(s)	84, 406, 794, 1183, 1400
BseRI	GAGGAG	4 cut(s)	164, 1056, 1059, 1958
BseSI	GKGCMC	1 cut(s)	2012
BseXI	GCAGC	2 cut(s)	427, 1819
BsgI	GTGCAG	1 cut(s)	2133
Bsh1236I	CGCG	2 cut(s)	251, 266
BshFI	GGCC	8 cut(s)	279, 568, 828, 854, 1366, 1442, 1676, 2231
BshNI	GGYRCC	1 cut(s)	2007
BshVI	ATCGAT	1 cut(s)	1171
BsiSI	CCGG	2 cut(s)	821, 2090
BslFI	GGGAC	2 cut(s)	661, 2066
BslI	CCNNNNNNNGG	2 cut(s)	1146, 2195
BsmAI	GTCTC	4 cut(s)	46, 74, 115, 1153
BsmFI	GGGAC	2 cut(s)	661, 2066
BsmI	GAATGC	1 cut(s)	1539
BsnI	GGCC	8 cut(s)	279, 568, 828, 854, 1366, 1442, 1676, 2231
Bso31I	GGTCTC	2 cut(s)	46, 74
Bsp119I	TTCGAA	1 cut(s)	1370
Bsp1286I	GDGCHC	1 cut(s)	2012
Bsp13I	TCCGGA	1 cut(s)	820
Bsp143I	GATC	5 cut(s)	75, 286, 667, 1927, 1973
Bsp1720I	GCTNAGC	2 cut(s)	384, 1871
Bsp19I	CCATGG	1 cut(s)	849
BspACI	CCGC	5 cut(s)	264, 301, 565, 866, 950
BspANI	GGCC	8 cut(s)	279, 568, 828, 854, 1366, 1442, 1676, 2231
BspCNI	CTCAG	5 cut(s)	397, 684, 1213, 1429, 1863
BspDI	ATCGAT	1 cut(s)	1171
BspEI	TCCGGA	1 cut(s)	820
BspFNI	CGCG	2 cut(s)	251, 266
BspHI	TCATGA	1 cut(s)	1509
BspLI	GGNNCC	5 cut(s)	14, 1138, 1336, 2009, 2272
BspMI	ACCTGC	1 cut(s)	2320
BspPI	GGATC	1 cut(s)	1935
BspQI	GCTCTTC	1 cut(s)	981
BspT104I	TTCGAA	1 cut(s)	1370
BspT107I	GGYRCC	1 cut(s)	2007
BspTNI	GGTCTC	2 cut(s)	46, 74
BsrDI	GCAATG	1 cut(s)	1090
BsrI	ACTGG	5 cut(s)	84, 406, 794, 1183, 1400
BssECI	CCNNGG	3 cut(s)	274, 849, 1288
BssMI	GATC	5 cut(s)	75, 286, 667, 1927, 1973
BssNI	GRCGYC	2 cut(s)	210, 622
BssT1I	CCWWGG	2 cut(s)	849, 1288
Bst2UI	CCWGG	2 cut(s)	370, 1712
Bst4CI	ACNGT	9 cut(s)	143, 205, 463, 771, 1396, 1497, 1706, 2025, 2308
Bst6I	CTCTTC	2 cut(s)	981, 1943
BstACI	GRCGYC	2 cut(s)	210, 622
BstAPI	GCANNNNNTGC	1 cut(s)	905
BstBAI	YACGTR	1 cut(s)	1143
BstBI	TTCGAA	1 cut(s)	1370
BstC8I	GCNNGC	3 cut(s)	305, 570, 1780
BstDEI	CTNAG	7 cut(s)	384, 477, 671, 1221, 1437, 1871, 2343
BstDSI	CCRYGG	1 cut(s)	849
BstFNI	CGCG	2 cut(s)	251, 266
BstHHI	GCGC	2 cut(s)	253, 445
BstKTI	GATC	5 cut(s)	78, 289, 670, 1930, 1976
BstMAI	GTCTC	4 cut(s)	46, 74, 115, 1153
BstMBI	GATC	5 cut(s)	75, 286, 667, 1927, 1973
BstMWI	GCNNNNNNNGC	6 cut(s)	596, 851, 905, 1022, 1730, 1867
BstNI	CCWGG	2 cut(s)	370, 1712
BstSCI	CCNGG	2 cut(s)	368, 1710
BstSLI	GKGCMC	1 cut(s)	2012
BstUI	CGCG	2 cut(s)	251, 266
BstV1I	GCAGC	2 cut(s)	427, 1819
BstV2I	GAAGAC	5 cut(s)	664, 1284, 1595, 1602, 2076
BstX2I	RGATCY	1 cut(s)	1927
BstXI	CCANNNNNNTGG	2 cut(s)	37, 1790
BstYI	RGATCY	1 cut(s)	1927
Bsu15I	ATCGAT	1 cut(s)	1171
BsuRI	GGCC	8 cut(s)	279, 568, 828, 854, 1366, 1442, 1676, 2231
BsuTUI	ATCGAT	1 cut(s)	1171
BtgI	CCRYGG	1 cut(s)	849
BtgZI	GCGATG	1 cut(s)	1753
BtsI	GCAGTG	2 cut(s)	1138, 1462
BtsIMutI	CAGTG	9 cut(s)	787, 1138, 1190, 1407, 1443, 1462, 1666, 2040, 2304
BveI	ACCTGC	1 cut(s)	2320
Cac8I	GCNNGC	3 cut(s)	305, 570, 1780
CaiI	CAGNNNCTG	1 cut(s)	2039
CciI	TCATGA	1 cut(s)	1509
CfoI	GCGC	2 cut(s)	253, 445
Cfr13I	GGNCC	4 cut(s)	827, 1835, 1882, 2281
ClaI	ATCGAT	1 cut(s)	1171
CseI	GACGC	4 cut(s)	218, 257, 377, 630
Csp6I	GTAC	3 cut(s)	292, 759, 1397
CspCI	CAANNNNNGTGG	2 cut(s)	2016, 2051
CviQI	GTAC	3 cut(s)	292, 759, 1397
DdeI	CTNAG	7 cut(s)	384, 477, 671, 1221, 1437, 1871, 2343
DpnI	GATC	5 cut(s)	77, 288, 669, 1929, 1975
DpnII	GATC	5 cut(s)	75, 286, 667, 1927, 1973
DraIII	CACNNNGTG	1 cut(s)	1146
DrdI	GACNNNNNNGTC	1 cut(s)	1833
DseDI	GACNNNNNNGTC	1 cut(s)	1833
EaeI	YGGCCR	3 cut(s)	852, 1674, 2229
Eam1104I	CTCTTC	2 cut(s)	981, 1943
EarI	CTCTTC	2 cut(s)	981, 1943
Eco130I	CCWWGG	2 cut(s)	849, 1288
Eco147I	AGGCCT	1 cut(s)	1366
Eco31I	GGTCTC	2 cut(s)	46, 74
Eco47I	GGWCC	3 cut(s)	1835, 1882, 2281
Eco57I	CTGAAG	2 cut(s)	647, 1916
Eco72I	CACGTG	1 cut(s)	1143
EcoRI	GAATTC	1 cut(s)	936
EcoRII	CCWGG	2 cut(s)	368, 1710
EcoT14I	CCWWGG	2 cut(s)	849, 1288
ErhI	CCWWGG	2 cut(s)	849, 1288
FaqI	GGGAC	2 cut(s)	661, 2066
FauI	CCCGC	3 cut(s)	308, 859, 957
FblI	GTMKAC	1 cut(s)	207
Fnu4HI	GCNGC	4 cut(s)	264, 441, 566, 1808
Fsp4HI	GCNGC	4 cut(s)	264, 441, 566, 1808
FspBI	CTAG	6 cut(s)	17, 1026, 1080, 1344, 1631, 1655
FspI	TGCGCA	1 cut(s)	444
GlaI	GCGC	2 cut(s)	252, 444
GluI	GCNGC	4 cut(s)	264, 441, 566, 1808
GsuI	CTGGAG	1 cut(s)	172
HaeIII	GGCC	8 cut(s)	279, 568, 828, 854, 1366, 1442, 1676, 2231
HapII	CCGG	2 cut(s)	821, 2090
HgaI	GACGC	4 cut(s)	218, 257, 377, 630
HhaI	GCGC	2 cut(s)	253, 445
Hin1I	GRCGYC	2 cut(s)	210, 622
Hin6I	GCGC	2 cut(s)	251, 443
HinP1I	GCGC	2 cut(s)	251, 443
HincII	GTYRAC	1 cut(s)	2335
HindII	GTYRAC	1 cut(s)	2335
HindIII	AAGCTT	1 cut(s)	1054
HpaII	CCGG	2 cut(s)	821, 2090
HphI	GGTGA	6 cut(s)	19, 358, 1250, 1322, 1757, 1968
Hpy166II	GTNNAC	9 cut(s)	208, 330, 508, 759, 1882, 2266, 2281, 2304, 2335
Hpy188I	TCNGA	9 cut(s)	316, 1032, 1116, 1222, 1501, 1579, 2238, 2290, 2346
Hpy8I	GTNNAC	9 cut(s)	208, 330, 508, 759, 1882, 2266, 2281, 2304, 2335
Hpy99I	CGWCG	2 cut(s)	122, 251
HpyAV	CCTTC	9 cut(s)	622, 818, 1213, 1377, 1525, 1817, 1826, 1958, 2114
HpyCH4III	ACNGT	9 cut(s)	143, 205, 463, 771, 1396, 1497, 1706, 2025, 2308
HpyCH4IV	ACGT	2 cut(s)	1142, 1919
HpyCH4V	TGCA	5 cut(s)	1088, 1156, 1778, 2114, 2329
HpyF10VI	GCNNNNNNNGC	6 cut(s)	596, 851, 905, 1022, 1730, 1867
HpyF3I	CTNAG	7 cut(s)	384, 477, 671, 1221, 1437, 1871, 2343
HpySE526I	ACGT	2 cut(s)	1142, 1919
Hsp92I	GRCGYC	2 cut(s)	210, 622
HspAI	GCGC	2 cut(s)	251, 443
Kpn2I	TCCGGA	1 cut(s)	820
Kzo9I	GATC	5 cut(s)	75, 286, 667, 1927, 1973
LguI	GCTCTTC	1 cut(s)	981
LmnI	GCTCC	9 cut(s)	18, 823, 1106, 1142, 1292, 1334, 1639, 1941, 2270
Lsp1109I	GCAGC	2 cut(s)	427, 1819
LweI	GCATC	9 cut(s)	454, 577, 854, 895, 1143, 1163, 1765, 1850, 2148
MaeI	CTAG	6 cut(s)	17, 1026, 1080, 1344, 1631, 1655
MaeII	ACGT	2 cut(s)	1142, 1919
MaeIII	GTNAC	6 cut(s)	25, 86, 364, 1514, 1661, 1753
MalI	GATC	5 cut(s)	77, 288, 669, 1929, 1975
MboI	GATC	5 cut(s)	75, 286, 667, 1927, 1973
MflI	RGATCY	1 cut(s)	1927
MhlI	GDGCHC	1 cut(s)	2012
MlsI	TGGCCA	2 cut(s)	854, 2231
MluNI	TGGCCA	2 cut(s)	854, 2231
MlyI	GAGTC	5 cut(s)	201, 654, 1100, 1352, 2048
MmeI	TCCRAC	4 cut(s)	202, 690, 1285, 2268
Mox20I	TGGCCA	2 cut(s)	854, 2231
MroI	TCCGGA	1 cut(s)	820
MroXI	GAANNNNTTC	2 cut(s)	681, 936
MscI	TGGCCA	2 cut(s)	854, 2231
MslI	CAYNNNNRTG	4 cut(s)	35, 537, 1544, 1788
Msp20I	TGGCCA	2 cut(s)	854, 2231
MspA1I	CMGCKG	1 cut(s)	1436
MspI	CCGG	2 cut(s)	821, 2090
MspR9I	CCNGG	2 cut(s)	370, 1712
Mva1269I	GAATGC	1 cut(s)	1539
MvaI	CCWGG	2 cut(s)	370, 1712
MvnI	CGCG	2 cut(s)	251, 266
MwoI	GCNNNNNNNGC	6 cut(s)	596, 851, 905, 1022, 1730, 1867
NcoI	CCATGG	1 cut(s)	849
NdeII	GATC	5 cut(s)	75, 286, 667, 1927, 1973
NlaIV	GGNNCC	5 cut(s)	14, 1138, 1336, 2009, 2272
NmeAIII	GCCGAG	1 cut(s)	255
NmuCI	GTSAC	4 cut(s)	25, 364, 1661, 1753
NsbI	TGCGCA	1 cut(s)	444
NspV	TTCGAA	1 cut(s)	1370
PagI	TCATGA	1 cut(s)	1509
PceI	AGGCCT	1 cut(s)	1366
PciSI	GCTCTTC	1 cut(s)	981
PcsI	WCGNNNNNNNCGW	3 cut(s)	159, 201, 282
PctI	GAATGC	1 cut(s)	1539
PdmI	GAANNNNTTC	2 cut(s)	681, 936
PflFI	GACNNNGTC	2 cut(s)	212, 1706
PflMI	CCANNNNNTGG	1 cut(s)	1146
PkrI	GCNGC	4 cut(s)	265, 442, 567, 1809
PleI	GAGTC	5 cut(s)	200, 654, 1099, 1352, 2048
PmaCI	CACGTG	1 cut(s)	1143
PmlI	CACGTG	1 cut(s)	1143
PpsI	GAGTC	5 cut(s)	200, 654, 1099, 1352, 2048
Ppu21I	YACGTR	1 cut(s)	1143
PshBI	ATTAAT	2 cut(s)	546, 2015
Psp6I	CCWGG	2 cut(s)	368, 1710
PspCI	CACGTG	1 cut(s)	1143
PspGI	CCWGG	2 cut(s)	368, 1710
PspN4I	GGNNCC	5 cut(s)	14, 1138, 1336, 2009, 2272
PspPI	GGNCC	4 cut(s)	827, 1835, 1882, 2281
PstNI	CAGNNNCTG	1 cut(s)	2039
PsuI	RGATCY	1 cut(s)	1927
PsyI	GACNNNGTC	2 cut(s)	212, 1706
PvuII	CAGCTG	1 cut(s)	1436
RsaI	GTAC	3 cut(s)	293, 760, 1398
RsaNI	GTAC	3 cut(s)	292, 759, 1397
RseI	CAYNNNNRTG	4 cut(s)	35, 537, 1544, 1788
SapI	GCTCTTC	1 cut(s)	981
SatI	GCNGC	4 cut(s)	264, 441, 566, 1808
Sau3AI	GATC	5 cut(s)	75, 286, 667, 1927, 1973
Sau96I	GGNCC	4 cut(s)	827, 1835, 1882, 2281
SchI	GAGTC	5 cut(s)	201, 654, 1100, 1352, 2048
ScrFI	CCNGG	2 cut(s)	370, 1712
SduI	GDGCHC	1 cut(s)	2012
SfaNI	GCATC	9 cut(s)	454, 577, 854, 895, 1143, 1163, 1765, 1850, 2148
SfuI	TTCGAA	1 cut(s)	1370
SinI	GGWCC	3 cut(s)	1835, 1882, 2281
SmiMI	CAYNNNNRTG	4 cut(s)	35, 537, 1544, 1788
SmlI	CTYRAG	4 cut(s)	71, 1360, 1958, 2101
SmoI	CTYRAG	4 cut(s)	71, 1360, 1958, 2101
SseBI	AGGCCT	1 cut(s)	1366
SsiI	CCGC	5 cut(s)	264, 301, 565, 866, 950
SspI	AATATT	2 cut(s)	1451, 2222
SspMI	CTAG	6 cut(s)	17, 1026, 1080, 1344, 1631, 1655
StuI	AGGCCT	1 cut(s)	1366
StyD4I	CCNGG	2 cut(s)	368, 1710
StyI	CCWWGG	2 cut(s)	849, 1288
TaaI	ACNGT	9 cut(s)	143, 205, 463, 771, 1396, 1497, 1706, 2025, 2308
TaiI	ACGT	2 cut(s)	1145, 1922
TaqII	GACCGA	1 cut(s)	56
TauI	GCSGC	2 cut(s)	266, 568
TscAI	CASTG	9 cut(s)	794, 1138, 1190, 1407, 1450, 1469, 1666, 2040, 2311
TseFI	GTSAC	4 cut(s)	25, 364, 1661, 1753
TseI	GCWGC	2 cut(s)	440, 1807
Tsp45I	GTSAC	4 cut(s)	25, 364, 1661, 1753
TspDTI	ATGAA	8 cut(s)	996, 1224, 1290, 1298, 1415, 1845, 1908, 2201
TspGWI	ACGGA	4 cut(s)	599, 1347, 2283, 2313
TspRI	CASTG	9 cut(s)	794, 1138, 1190, 1407, 1450, 1469, 1666, 2040, 2311
Tth111I	GACNNNGTC	2 cut(s)	212, 1706
Van91I	CCANNNNNTGG	1 cut(s)	1146
VpaK11BI	GGWCC	3 cut(s)	1835, 1882, 2281
VspI	ATTAAT	2 cut(s)	546, 2015
XapI	RAATTY	6 cut(s)	638, 777, 936, 1718, 1895, 2181
XcmI	CCANNNNNNNNNTGG	2 cut(s)	856, 1790
XmiI	GTMKAC	1 cut(s)	207
XmnI	GAANNNNTTC	2 cut(s)	681, 936
XspI	CTAG	6 cut(s)	17, 1026, 1080, 1344, 1631, 1655

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.