Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G76170 AT1G76170 AT1G76170 AT1G76170 AT1G76170 AT1G76170 AT1G76170 AT2G44270 |
| fragaria_vesca | FvH4_2g37771 FvH4_2g37771 FvH4_2g37771 |
| malus_domestica | MD08G1004800.v1.1 MD15G1004300.v1.1 |
| prunus_persica | Prupe.1G356900_v2.0.a1 |
| pyrus_communis | pycom08g00360 pycom08g00370 pycom15g00310 pycom15g00320 |
| rosa_chinensis | RchiOBHm_Chr6g0303951 RchiOBHm_Chr6g0303961 |
| rosa_laevigata | RLG00000011030 |
| rosa_multiflora | Rmu_sc0004644.1_g000013 Rmu_sc0004644.1_g000014 |
| rosa_roxburghii | Rroxscaffold_7G00164230 |
| rosa_rugosa | Rorug06G0326200 |
| rosa_samantha | Rh6AG440500 Rh6BG462400 Rh6CG452800 Rh6DG439800 |
| rosa_wichuraiana | Rw6G038150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 84 |
| AciI | CCGC | 1 cut(s) | 459 |
| AcoI | YGGCCR | 1 cut(s) | 541 |
| AcsI | RAATTY | 2 cut(s) | 403, 411 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 440, 533 |
| AgsI | TTSAA | 6 cut(s) | 79, 139, 183, 271, 417, 423 |
| AjnI | CCWGG | 1 cut(s) | 368 |
| AluBI | AGCT | 2 cut(s) | 91, 532 |
| AluI | AGCT | 2 cut(s) | 91, 532 |
| Alw26I | GTCTC | 1 cut(s) | 14 |
| Ama87I | CYCGRG | 1 cut(s) | 549 |
| AoxI | GGCC | 4 cut(s) | 51, 203, 489, 541 |
| ApeKI | GCWGC | 1 cut(s) | 68 |
| ApoI | RAATTY | 2 cut(s) | 403, 411 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 129 |
| AspS9I | GGNCC | 2 cut(s) | 52, 203 |
| AsuHPI | GGTGA | 3 cut(s) | 164, 206, 300 |
| AvaI | CYCGRG | 1 cut(s) | 549 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 163, 195 |
| BauI | CACGAG | 1 cut(s) | 333 |
| BbsI | GAAGAC | 1 cut(s) | 204 |
| BbvI | GCAGC | 1 cut(s) | 55 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 47, 81 |
| BciT130I | CCWGG | 1 cut(s) | 370 |
| BcoDI | GTCTC | 1 cut(s) | 14 |
| BisI | GCNGC | 1 cut(s) | 69 |
| BlsI | GCNGC | 1 cut(s) | 70 |
| Bme1390I | CCNGG | 1 cut(s) | 370 |
| BmeT110I | CYCGRG | 1 cut(s) | 549 |
| BmgT120I | GGNCC | 2 cut(s) | 52, 203 |
| BmrFI | CCNGG | 1 cut(s) | 370 |
| BmsI | GCATC | 4 cut(s) | 164, 206, 420, 568 |
| BpiI | GAAGAC | 1 cut(s) | 204 |
| Bpu10I | CCTNAGC | 1 cut(s) | 582 |
| BpuEI | CTTGAG | 1 cut(s) | 524 |
| BsaI | GGTCTC | 1 cut(s) | 14 |
| BsaJI | CCNNGG | 2 cut(s) | 368, 369 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 272, 302 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 440, 533 |
| Bse1I | ACTGG | 3 cut(s) | 103, 196, 471 |
| Bse3DI | GCAATG | 2 cut(s) | 156, 626 |
| BseBI | CCWGG | 1 cut(s) | 370 |
| BseDI | CCNNGG | 2 cut(s) | 368, 369 |
| BseGI | GGATG | 1 cut(s) | 583 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 440, 533 |
| BseMI | GCAATG | 2 cut(s) | 156, 626 |
| BseNI | ACTGG | 3 cut(s) | 103, 196, 471 |
| BseXI | GCAGC | 1 cut(s) | 55 |
| BseYI | CCCAGC | 1 cut(s) | 532 |
| BsgI | GTGCAG | 1 cut(s) | 54 |
| Bsh1285I | CGRYCG | 1 cut(s) | 61 |
| BshFI | GGCC | 4 cut(s) | 53, 205, 491, 543 |
| BsiEI | CGRYCG | 1 cut(s) | 61 |
| BsiHKCI | CYCGRG | 1 cut(s) | 549 |
| BsiSI | CCGG | 1 cut(s) | 544 |
| BslFI | GGGAC | 1 cut(s) | 457 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 440, 533 |
| BsmAI | GTCTC | 1 cut(s) | 14 |
| BsmFI | GGGAC | 1 cut(s) | 457 |
| BsmI | GAATGC | 1 cut(s) | 302 |
| BsnI | GGCC | 4 cut(s) | 53, 205, 491, 543 |
| Bso31I | GGTCTC | 1 cut(s) | 14 |
| BsoBI | CYCGRG | 1 cut(s) | 549 |
| Bsp143I | GATC | 1 cut(s) | 58 |
| BspACI | CCGC | 1 cut(s) | 459 |
| BspANI | GGCC | 4 cut(s) | 53, 205, 491, 543 |
| BspTNI | GGTCTC | 1 cut(s) | 14 |
| BsrDI | GCAATG | 2 cut(s) | 156, 626 |
| BsrI | ACTGG | 3 cut(s) | 103, 196, 471 |
| BssECI | CCNNGG | 2 cut(s) | 368, 369 |
| BssMI | GATC | 1 cut(s) | 58 |
| BssSI | CACGAG | 1 cut(s) | 333 |
| Bst2BI | CACGAG | 1 cut(s) | 333 |
| Bst2UI | CCWGG | 1 cut(s) | 370 |
| Bst4CI | ACNGT | 3 cut(s) | 75, 130, 456 |
| BstC8I | GCNNGC | 1 cut(s) | 93 |
| BstDEI | CTNAG | 1 cut(s) | 582 |
| BstF5I | GGATG | 1 cut(s) | 583 |
| BstKTI | GATC | 1 cut(s) | 61 |
| BstMAI | GTCTC | 1 cut(s) | 14 |
| BstMBI | GATC | 1 cut(s) | 58 |
| BstMCI | CGRYCG | 1 cut(s) | 61 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 508 |
| BstNI | CCWGG | 1 cut(s) | 370 |
| BstSCI | CCNGG | 1 cut(s) | 368 |
| BstV1I | GCAGC | 1 cut(s) | 55 |
| BstV2I | GAAGAC | 1 cut(s) | 204 |
| BsuRI | GGCC | 4 cut(s) | 53, 205, 491, 543 |
| BtsCI | GGATG | 1 cut(s) | 583 |
| BtsIMutI | CAGTG | 3 cut(s) | 71, 189, 291 |
| Cac8I | GCNNGC | 1 cut(s) | 93 |
| Cfr13I | GGNCC | 2 cut(s) | 52, 203 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 604, 639 |
| CviAII | CATG | 1 cut(s) | 571 |
| CviJI | RGCY | 9 cut(s) | 53, 91, 205, 277, 374, 491, 511, 532, 543 |
| CviKI_1 | RGCY | 9 cut(s) | 53, 91, 205, 277, 374, 491, 511, 532, 543 |
| DdeI | CTNAG | 1 cut(s) | 582 |
| DpnI | GATC | 1 cut(s) | 60 |
| DpnII | GATC | 1 cut(s) | 58 |
| DraI | TTTAAA | 1 cut(s) | 229 |
| EaeI | YGGCCR | 1 cut(s) | 541 |
| Eco147I | AGGCCT | 1 cut(s) | 491 |
| Eco31I | GGTCTC | 1 cut(s) | 14 |
| Eco32I | GATATC | 1 cut(s) | 385 |
| Eco88I | CYCGRG | 1 cut(s) | 549 |
| EcoO109I | RGGNCCY | 1 cut(s) | 52 |
| EcoRII | CCWGG | 1 cut(s) | 368 |
| EcoRV | GATATC | 1 cut(s) | 385 |
| EcoT22I | ATGCAT | 2 cut(s) | 265, 302 |
| FaeI | CATG | 1 cut(s) | 574 |
| FaiI | YATR | 7 cut(s) | 105, 240, 257, 261, 265, 377, 572 |
| FaqI | GGGAC | 1 cut(s) | 457 |
| FatI | CATG | 1 cut(s) | 570 |
| FblI | GTMKAC | 1 cut(s) | 84 |
| Fnu4HI | GCNGC | 1 cut(s) | 69 |
| FokI | GGATG | 1 cut(s) | 590 |
| Fsp4HI | GCNGC | 1 cut(s) | 69 |
| GluI | GCNGC | 1 cut(s) | 69 |
| GsaI | CCCAGC | 1 cut(s) | 536 |
| HaeIII | GGCC | 4 cut(s) | 53, 205, 491, 543 |
| HapII | CCGG | 1 cut(s) | 544 |
| Hin1II | CATG | 1 cut(s) | 574 |
| HindIII | AAGCTT | 1 cut(s) | 89 |
| HinfI | GANTC | 2 cut(s) | 360, 547 |
| HpaII | CCGG | 1 cut(s) | 544 |
| HphI | GGTGA | 3 cut(s) | 164, 206, 300 |
| Hpy166II | GTNNAC | 2 cut(s) | 85, 452 |
| Hpy188I | TCNGA | 4 cut(s) | 365, 410, 477, 641 |
| Hpy188III | TCNNGA | 3 cut(s) | 13, 271, 335 |
| Hpy8I | GTNNAC | 2 cut(s) | 85, 452 |
| Hpy99I | CGWCG | 1 cut(s) | 48 |
| HpyAV | CCTTC | 4 cut(s) | 37, 73, 238, 568 |
| HpyCH4III | ACNGT | 3 cut(s) | 75, 130, 456 |
| HpyCH4V | TGCA | 9 cut(s) | 24, 71, 110, 161, 177, 219, 263, 300, 486 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 508 |
| HpyF3I | CTNAG | 1 cut(s) | 582 |
| Hsp92II | CATG | 1 cut(s) | 574 |
| Kzo9I | GATC | 1 cut(s) | 58 |
| Lsp1109I | GCAGC | 1 cut(s) | 55 |
| LweI | GCATC | 4 cut(s) | 164, 206, 420, 568 |
| MaeIII | GTNAC | 3 cut(s) | 152, 187, 461 |
| MalI | GATC | 1 cut(s) | 60 |
| MboI | GATC | 1 cut(s) | 58 |
| MboII | GAAGA | 1 cut(s) | 209 |
| MfeI | CAATTG | 2 cut(s) | 19, 183 |
| MluCI | AATT | 6 cut(s) | 19, 183, 207, 403, 411, 537 |
| MlyI | GAGTC | 1 cut(s) | 541 |
| MnlI | CCTC | 5 cut(s) | 65, 143, 267, 499, 545 |
| Mph1103I | ATGCAT | 2 cut(s) | 265, 302 |
| MroXI | GAANNNNTTC | 1 cut(s) | 129 |
| MseI | TTAA | 3 cut(s) | 167, 228, 558 |
| MspI | CCGG | 1 cut(s) | 544 |
| MspR9I | CCNGG | 1 cut(s) | 370 |
| MunI | CAATTG | 2 cut(s) | 19, 183 |
| Mva1269I | GAATGC | 1 cut(s) | 302 |
| MvaI | CCWGG | 1 cut(s) | 370 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 508 |
| NdeII | GATC | 1 cut(s) | 58 |
| NlaIII | CATG | 1 cut(s) | 574 |
| NmuCI | GTSAC | 2 cut(s) | 152, 187 |
| NsiI | ATGCAT | 2 cut(s) | 265, 302 |
| PaeR7I | CTCGAG | 1 cut(s) | 549 |
| PasI | CCCWGGG | 1 cut(s) | 369 |
| PceI | AGGCCT | 1 cut(s) | 491 |
| PctI | GAATGC | 1 cut(s) | 302 |
| PdmI | GAANNNNTTC | 1 cut(s) | 129 |
| PfeI | GAWTC | 1 cut(s) | 360 |
| PkrI | GCNGC | 1 cut(s) | 70 |
| Ple19I | CGATCG | 1 cut(s) | 61 |
| PleI | GAGTC | 1 cut(s) | 541 |
| PpsI | GAGTC | 1 cut(s) | 541 |
| Psp6I | CCWGG | 1 cut(s) | 368 |
| PspFI | CCCAGC | 1 cut(s) | 532 |
| PspGI | CCWGG | 1 cut(s) | 368 |
| PspPI | GGNCC | 2 cut(s) | 52, 203 |
| PspXI | VCTCGAGB | 1 cut(s) | 549 |
| PvuI | CGATCG | 1 cut(s) | 61 |
| SaqAI | TTAA | 3 cut(s) | 167, 228, 558 |
| SatI | GCNGC | 1 cut(s) | 69 |
| Sau3AI | GATC | 1 cut(s) | 58 |
| Sau96I | GGNCC | 2 cut(s) | 52, 203 |
| SchI | GAGTC | 1 cut(s) | 541 |
| ScrFI | CCNGG | 1 cut(s) | 370 |
| SetI | ASST | 7 cut(s) | 29, 84, 93, 154, 226, 239, 534 |
| SfaNI | GCATC | 4 cut(s) | 164, 206, 420, 568 |
| Sfr274I | CTCGAG | 1 cut(s) | 549 |
| SlaI | CTCGAG | 1 cut(s) | 549 |
| SmlI | CTYRAG | 3 cut(s) | 11, 503, 549 |
| SmoI | CTYRAG | 3 cut(s) | 11, 503, 549 |
| Sse9I | AATT | 6 cut(s) | 19, 183, 207, 403, 411, 537 |
| SseBI | AGGCCT | 1 cut(s) | 491 |
| SsiI | CCGC | 1 cut(s) | 459 |
| StuI | AGGCCT | 1 cut(s) | 491 |
| StyD4I | CCNGG | 1 cut(s) | 368 |
| TaaI | ACNGT | 3 cut(s) | 75, 130, 456 |
| TaqI | TCGA | 3 cut(s) | 57, 550, 609 |
| TasI | AATT | 6 cut(s) | 19, 183, 207, 403, 411, 537 |
| TfiI | GAWTC | 1 cut(s) | 360 |
| Tru1I | TTAA | 3 cut(s) | 167, 228, 558 |
| Tru9I | TTAA | 3 cut(s) | 167, 228, 558 |
| TscAI | CASTG | 3 cut(s) | 78, 196, 298 |
| TseFI | GTSAC | 2 cut(s) | 152, 187 |
| TseI | GCWGC | 1 cut(s) | 68 |
| Tsp45I | GTSAC | 2 cut(s) | 152, 187 |
| TspDTI | ATGAA | 2 cut(s) | 331, 587 |
| TspRI | CASTG | 3 cut(s) | 78, 196, 298 |
| XapI | RAATTY | 2 cut(s) | 403, 411 |
| XhoI | CTCGAG | 1 cut(s) | 549 |
| XmiI | GTMKAC | 1 cut(s) | 84 |
| XmnI | GAANNNNTTC | 1 cut(s) | 129 |
| Zsp2I | ATGCAT | 2 cut(s) | 265, 302 |