pycom08g01910

BEL1-like homeodomain protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
1411489 .. 1413164
1676 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g01910.3

Sequence Viewer

Length: 1320 bp
ATGGTGTCACAAGACTCACCCCCAAATCCCTCCTCAAGCATTTTCCACCAGTTCATAATCTCAGACTCCATTTCTGCTCAAAACCATCATCTGGAAACCCAGCACCTTGACGCTTATCCGCCTTCGTTTCAAACTAGTACCGCAGTTCCACAAGCTCTCGGAGTCCTCCCCGGCATTCACGCCCTCGGCGAAAGGATGTCCCGCTCAGTAGACCTTGTTCAAGCTCCTACTGGCGCATCAGTGGAGAACCAAGCACAGCGGCTTTCGCTCTCCCTCGGTTCCCGCATGCTTGTTCCTTCTGTCCAGTACCGGTACAACAACTTCCTCATTGGGGAAGAATCAGGGGAGGCCTGCAACCCGGGAGTTGAGCACGTAGGCGATGAGTACTGCTTCATGGGCGGCGCACTTGCTTCGCATTCAAGGGCGCTGAATAGATCCTGCTCCACTTCTTATGGAGCAGAATCTGTAGCCGCTGTCATTGCGAATTCGAAATATCTTAAACCGGCTCAGTCCCTCTTGGATGAGATTGTTAATATTGGCGGAAAATTGGTTGACATTAGCAATGAGAAACATGTTGGGAAATTGTACGGAGAAGGGCGGCGAGGCGGTATGGGGCTCTCCTCTGAGCTAAAAGCAGAGCTGTCTTGCAATGCCGGGCTCATGAACGCCGACAAACACGAATTGCAAGCTAGACTTGCAAGCCTCATCACATTGTTGGAACAGGTTGAGGACAGATGTGGGAAGTACTACCATCAAATGGAACAAGTGATATCATCATTTGAGATGGTGGTAGGGGAAGGAGCAGCCAAGTCCTACACAGCTCTGGCACTCAAGGCCATGTCAAGGCATTTTTGCAGCTTGAGAGATGCCATAGTTTCACATATCTACACTGAGAAGCGAAAGCTGCTGCAAGATGTTCCGAAAATCAGCAGCGGGTTATCGCAACTGAACTTGTTTGATAAAGAGTGCAGGCACAGAAGAATGTCCCTTCAACAGCTCGGCATTTTCCAGAGCCAACGCCAAGCTTTCAGACCAATTCGTGGATTGCCAGAGACCTCTGTTGCGATTCTTCGCACTTGGCTTTTCGAACACTTCCTCCACCCTTACCCGAATGACAATGAAAAGCTGCTGTTGGCATCACAAACAGGGCTGTCCAAGAACCAAGTTGCGAATTGGTTCATAAACGCGCGTGTCCGGCTGTGGAAACCTATGATTGAAGAAATGTACAAGGAAGAGTTTGGGGAGTCTTCAGAGGACTCTAACTCTTTAGCCGCCGGTTCCATGACCGGCGAAGGCAACACAGATCAGACAGAGGATTAA

Protein Analysis

440

Amino Acids

48.42

Weight (kDa)

6.03

Isoelectric Point (pI)

46.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 91, 757, 1040
AccBSI CCGCTC 1 cut(s) 204
AccI GTMKAC 1 cut(s) 210
AccII CGCG 2 cut(s) 1187, 1189
AclWI GGATC 1 cut(s) 429
AcsI RAATTY 1 cut(s) 484
AcuI CTGAAG 1 cut(s) 1233
AfaI GTAC 7 cut(s) 139, 308, 314, 386, 587, 746, 1226
AfiI CCNNNNNNNGG 5 cut(s) 91, 331, 757, 843, 1040
AflIII ACRYGT 1 cut(s) 571
AgeI ACCGGT 1 cut(s) 309
AgsI TTSAA 5 cut(s) 131, 221, 420, 992, 1217
AhlI ACTAGT 1 cut(s) 134
AloI GAACNNNNNNTCC 2 cut(s) 1080, 1112
Alw21I GWGCWC 1 cut(s) 372
Alw26I GTCTC 1 cut(s) 1046
AlwI GGATC 1 cut(s) 429
AlwNI CAGNNNCTG 1 cut(s) 464
Ama87I CYCGRG 1 cut(s) 358
AoxI GGCC 2 cut(s) 348, 834
ApeKI GCWGC 6 cut(s) 803, 855, 904, 907, 930, 1126
ApoI RAATTY 1 cut(s) 484
AsiGI ACCGGT 1 cut(s) 309
Asp700I GAANNNNTTC 1 cut(s) 1175
AspLEI GCGC 4 cut(s) 236, 404, 427, 1189
AsuC2I CCSGG 4 cut(s) 171, 359, 360, 655
AsuHPI GGTGA 1 cut(s) 9
AsuII TTCGAA 2 cut(s) 488, 1086
AvaI CYCGRG 1 cut(s) 358
BanII GRGCYC 2 cut(s) 618, 660
BarI GAAGNNNNNNTAC 2 cut(s) 305, 337
BbsI GAAGAC 1 cut(s) 1239
Bbv12I GWGCWC 1 cut(s) 372
BbvI GCAGC 6 cut(s) 815, 867, 891, 894, 942, 1113
BccI CCATC 3 cut(s) 93, 759, 778
BcgI CGANNNNNNTGC 2 cut(s) 393, 427
BcnI CCSGG 4 cut(s) 171, 359, 360, 655
BcoDI GTCTC 1 cut(s) 1046
BcuI ACTAGT 1 cut(s) 134
BfaI CTAG 2 cut(s) 135, 690
BfmI CTRYAG 1 cut(s) 465
BfoI RGCGCY 1 cut(s) 428
BmcAI AGTACT 2 cut(s) 386, 746
Bme1390I CCNGG 4 cut(s) 171, 359, 360, 655
BmeT110I CYCGRG 1 cut(s) 358
BmiI GGNNCC 2 cut(s) 280, 1279
BmrFI CCNGG 4 cut(s) 171, 359, 360, 655
BmsI GCATC 3 cut(s) 245, 856, 1145
BpiI GAAGAC 1 cut(s) 1239
Bpu14I TTCGAA 2 cut(s) 488, 1086
BpuEI CTTGAG 3 cut(s) 19, 815, 880
BpuMI CCSGG 4 cut(s) 171, 359, 360, 655
BsaAI YACGTR 1 cut(s) 373
BsaI GGTCTC 1 cut(s) 1046
BsaJI CCNNGG 4 cut(s) 169, 184, 274, 358
BsaWI WCCGGW 1 cut(s) 309
BsaXI ACNNNNNCTCC 2 cut(s) 1080, 1110
Bsc4I CCNNNNNNNGG 5 cut(s) 91, 331, 757, 843, 1040
Bse118I RCCGGY 4 cut(s) 309, 502, 1274, 1286
Bse1I ACTGG 3 cut(s) 49, 235, 304
Bse3DI GCAATG 3 cut(s) 477, 568, 655
BseDI CCNNGG 4 cut(s) 169, 184, 274, 358
BseGI GGATG 2 cut(s) 201, 526
BseLI CCNNNNNNNGG 5 cut(s) 91, 331, 757, 843, 1040
BseMI GCAATG 3 cut(s) 477, 568, 655
BseMII CTCAG 5 cut(s) 75, 219, 521, 615, 882
BseNI ACTGG 3 cut(s) 49, 235, 304
BseRI GAGGAG 2 cut(s) 22, 610
BseXI GCAGC 6 cut(s) 815, 867, 891, 894, 942, 1113
BseYI CCCAGC 1 cut(s) 99
BsgI GTGCAG 1 cut(s) 988
Bsh1236I CGCG 2 cut(s) 1187, 1189
BshFI GGCC 2 cut(s) 350, 836
BshTI ACCGGT 1 cut(s) 309
BsiHKAI GWGCWC 1 cut(s) 372
BsiHKCI CYCGRG 1 cut(s) 358
BsiSI CCGG 8 cut(s) 171, 310, 359, 503, 654, 1195, 1275, 1287
BslFI GGGAC 3 cut(s) 184, 496, 970
BslI CCNNNNNNNGG 5 cut(s) 91, 331, 757, 843, 1040
BsmAI GTCTC 1 cut(s) 1046
BsmFI GGGAC 3 cut(s) 184, 496, 970
BsmI GAATGC 2 cut(s) 174, 415
BsnI GGCC 2 cut(s) 350, 836
Bso31I GGTCTC 1 cut(s) 1046
BsoBI CYCGRG 1 cut(s) 358
Bsp119I TTCGAA 2 cut(s) 488, 1086
Bsp1286I GDGCHC 3 cut(s) 372, 618, 660
Bsp1407I TGTACA 1 cut(s) 1224
Bsp143I GATC 2 cut(s) 434, 1303
BspANI GGCC 2 cut(s) 350, 836
BspCNI CTCAG 5 cut(s) 74, 218, 520, 616, 883
BspFNI CGCG 2 cut(s) 1187, 1189
BspHI TCATGA 1 cut(s) 660
BspLI GGNNCC 2 cut(s) 280, 1279
BspPI GGATC 1 cut(s) 429
BspT104I TTCGAA 2 cut(s) 488, 1086
BspTNI GGTCTC 1 cut(s) 1046
BsrBI CCGCTC 1 cut(s) 204
BsrDI GCAATG 3 cut(s) 477, 568, 655
BsrFI RCCGGY 4 cut(s) 309, 502, 1274, 1286
BsrGI TGTACA 1 cut(s) 1224
BsrI ACTGG 3 cut(s) 49, 235, 304
BssAI RCCGGY 4 cut(s) 309, 502, 1274, 1286
BssECI CCNNGG 4 cut(s) 169, 184, 274, 358
BssMI GATC 2 cut(s) 434, 1303
Bst6I CTCTTC 1 cut(s) 1227
BstAUI TGTACA 1 cut(s) 1224
BstBAI YACGTR 1 cut(s) 373
BstBI TTCGAA 2 cut(s) 488, 1086
BstC8I GCNNGC 5 cut(s) 287, 352, 687, 700, 971
BstDEI CTNAG 5 cut(s) 61, 205, 507, 624, 891
BstF5I GGATG 2 cut(s) 201, 526
BstFNI CGCG 2 cut(s) 1187, 1189
BstH2I RGCGCY 1 cut(s) 428
BstHHI GCGC 4 cut(s) 236, 404, 427, 1189
BstKTI GATC 2 cut(s) 437, 1306
BstMAI GTCTC 1 cut(s) 1046
BstMBI GATC 2 cut(s) 434, 1303
BstMWI GCNNNNNNNGC 7 cut(s) 265, 396, 479, 695, 833, 904, 1195
BstNSI RCATGY 2 cut(s) 289, 575
BstSCI CCNGG 4 cut(s) 169, 357, 358, 653
BstSFI CTRYAG 1 cut(s) 465
BstUI CGCG 2 cut(s) 1187, 1189
BstV1I GCAGC 6 cut(s) 815, 867, 891, 894, 942, 1113
BstV2I GAAGAC 1 cut(s) 1239
BstX2I RGATCY 1 cut(s) 434
BstYI RGATCY 1 cut(s) 434
BsuRI GGCC 2 cut(s) 350, 836
BtgZI GCGATG 1 cut(s) 393
BtsCI GGATG 2 cut(s) 201, 526
BtsIMutI CAGTG 2 cut(s) 246, 888
Cac8I GCNNGC 5 cut(s) 287, 352, 687, 700, 971
CaiI CAGNNNCTG 1 cut(s) 464
CciI TCATGA 1 cut(s) 660
CfoI GCGC 4 cut(s) 236, 404, 427, 1189
Cfr10I RCCGGY 4 cut(s) 309, 502, 1274, 1286
Cfr9I CCCGGG 1 cut(s) 358
CseI GACGC 1 cut(s) 119
Csp6I GTAC 7 cut(s) 138, 307, 313, 385, 586, 745, 1225
CspAI ACCGGT 1 cut(s) 309
CviAII CATG 6 cut(s) 286, 394, 572, 661, 838, 1282
CviQI GTAC 7 cut(s) 138, 307, 313, 385, 586, 745, 1225
DdeI CTNAG 5 cut(s) 61, 205, 507, 624, 891
DpnI GATC 2 cut(s) 436, 1305
DpnII GATC 2 cut(s) 434, 1303
Eam1104I CTCTTC 1 cut(s) 1227
EarI CTCTTC 1 cut(s) 1227
EciI GGCGGA 2 cut(s) 108, 555
Eco147I AGGCCT 1 cut(s) 350
Eco24I GRGCYC 2 cut(s) 618, 660
Eco31I GGTCTC 1 cut(s) 1046
Eco32I GATATC 1 cut(s) 771
Eco57I CTGAAG 1 cut(s) 1233
Eco88I CYCGRG 1 cut(s) 358
EcoRI GAATTC 1 cut(s) 484
EcoRV GATATC 1 cut(s) 771
EcoT38I GRGCYC 2 cut(s) 618, 660
FaeI CATG 6 cut(s) 289, 397, 575, 664, 841, 1285
FalI AAGNNNNNCTT 2 cut(s) 678, 710
FaqI GGGAC 3 cut(s) 184, 496, 970
FatI CATG 6 cut(s) 285, 393, 571, 660, 837, 1281
FauI CCCGC 3 cut(s) 209, 290, 926
FblI GTMKAC 1 cut(s) 210
FokI GGATG 2 cut(s) 208, 533
FriOI GRGCYC 2 cut(s) 618, 660
FspBI CTAG 2 cut(s) 135, 690
GlaI GCGC 4 cut(s) 235, 403, 426, 1188
GsaI CCCAGC 1 cut(s) 103
HaeII RGCGCY 1 cut(s) 428
HaeIII GGCC 2 cut(s) 350, 836
HapII CCGG 8 cut(s) 171, 310, 359, 503, 654, 1195, 1275, 1287
HgaI GACGC 1 cut(s) 119
HhaI GCGC 4 cut(s) 236, 404, 427, 1189
Hin1II CATG 6 cut(s) 289, 397, 575, 664, 841, 1285
Hin6I GCGC 4 cut(s) 234, 402, 425, 1187
HinP1I GCGC 4 cut(s) 234, 402, 425, 1187
HincII GTYRAC 1 cut(s) 553
HindII GTYRAC 1 cut(s) 553
HindIII AAGCTT 1 cut(s) 1023
HinfI GANTC 8 cut(s) 14, 65, 162, 338, 461, 1066, 1244, 1256
HpaII CCGG 8 cut(s) 171, 310, 359, 503, 654, 1195, 1275, 1287
HphI GGTGA 1 cut(s) 9
Hpy166II GTNNAC 2 cut(s) 211, 553
Hpy188I TCNGA 7 cut(s) 64, 161, 625, 921, 1031, 1252, 1308
Hpy188III TCNNGA 3 cut(s) 92, 661, 1009
Hpy8I GTNNAC 2 cut(s) 211, 553
HpyAV CCTTC 6 cut(s) 132, 306, 587, 791, 998, 1286
HpyCH4IV ACGT 1 cut(s) 372
HpyCH4V TGCA 7 cut(s) 354, 648, 685, 698, 855, 910, 969
HpyF10VI GCNNNNNNNGC 7 cut(s) 265, 396, 479, 695, 833, 904, 1195
HpyF3I CTNAG 5 cut(s) 61, 205, 507, 624, 891
HpySE526I ACGT 1 cut(s) 372
Hsp92II CATG 6 cut(s) 289, 397, 575, 664, 841, 1285
HspAI GCGC 4 cut(s) 234, 402, 425, 1187
Kzo9I GATC 2 cut(s) 434, 1303
LmnI GCTCC 4 cut(s) 229, 446, 455, 800
Lsp1109I GCAGC 6 cut(s) 815, 867, 891, 894, 942, 1113
LweI GCATC 3 cut(s) 245, 856, 1145
MaeI CTAG 2 cut(s) 135, 690
MaeII ACGT 1 cut(s) 372
MaeIII GTNAC 1 cut(s) 6
MalI GATC 2 cut(s) 436, 1305
MbiI CCGCTC 1 cut(s) 204
MboI GATC 2 cut(s) 434, 1303
MboII GAAGA 6 cut(s) 347, 990, 1061, 1229, 1239, 1244
MflI RGATCY 1 cut(s) 434
MhlI GDGCHC 3 cut(s) 372, 618, 660
MluCI AATT 6 cut(s) 484, 545, 581, 680, 1035, 1171
MlyI GAGTC 5 cut(s) 8, 59, 171, 1250, 1253
MmeI TCCRAC 1 cut(s) 696
MroXI GAANNNNTTC 1 cut(s) 1175
MseI TTAA 3 cut(s) 498, 531, 1318
MspA1I CMGCKG 3 cut(s) 259, 473, 933
MspI CCGG 8 cut(s) 171, 310, 359, 503, 654, 1195, 1275, 1287
MspR9I CCNGG 4 cut(s) 171, 359, 360, 655
Mva1269I GAATGC 2 cut(s) 174, 415
MvnI CGCG 2 cut(s) 1187, 1189
MwoI GCNNNNNNNGC 7 cut(s) 265, 396, 479, 695, 833, 904, 1195
NciI CCSGG 4 cut(s) 171, 359, 360, 655
NdeII GATC 2 cut(s) 434, 1303
NlaIII CATG 6 cut(s) 289, 397, 575, 664, 841, 1285
NlaIV GGNNCC 2 cut(s) 280, 1279
NmeAIII GCCGAG 2 cut(s) 165, 978
NmuCI GTSAC 1 cut(s) 6
NspI RCATGY 2 cut(s) 289, 575
NspV TTCGAA 2 cut(s) 488, 1086
PaeI GCATGC 1 cut(s) 289
PagI TCATGA 1 cut(s) 660
PceI AGGCCT 1 cut(s) 350
PciI ACATGT 1 cut(s) 571
PcsI WCGNNNNNNNCGW 1 cut(s) 186
PctI GAATGC 2 cut(s) 174, 415
PdmI GAANNNNTTC 1 cut(s) 1175
PfeI GAWTC 3 cut(s) 338, 461, 1066
PflMI CCANNNNNTGG 3 cut(s) 91, 757, 1040
PinAI ACCGGT 1 cut(s) 309
PleI GAGTC 5 cut(s) 8, 59, 170, 1250, 1252
PpsI GAGTC 5 cut(s) 8, 59, 170, 1250, 1252
Ppu21I YACGTR 1 cut(s) 373
PscI ACATGT 1 cut(s) 571
PspFI CCCAGC 1 cut(s) 99
PspN4I GGNNCC 2 cut(s) 280, 1279
PsrI GAACNNNNNNTAC 2 cut(s) 201, 233
PstNI CAGNNNCTG 1 cut(s) 464
PsuI RGATCY 1 cut(s) 434
RsaI GTAC 7 cut(s) 139, 308, 314, 386, 587, 746, 1226
RsaNI GTAC 7 cut(s) 138, 307, 313, 385, 586, 745, 1225
SaqAI TTAA 3 cut(s) 498, 531, 1318
Sau3AI GATC 2 cut(s) 434, 1303
ScaI AGTACT 2 cut(s) 386, 746
SchI GAGTC 5 cut(s) 8, 59, 171, 1250, 1253
ScrFI CCNGG 4 cut(s) 171, 359, 360, 655
SduI GDGCHC 3 cut(s) 372, 618, 660
SfaNI GCATC 3 cut(s) 245, 856, 1145
SfcI CTRYAG 1 cut(s) 465
SfuI TTCGAA 2 cut(s) 488, 1086
SmaI CCCGGG 1 cut(s) 360
SmlI CTYRAG 3 cut(s) 34, 830, 859
SmoI CTYRAG 3 cut(s) 34, 830, 859
SpeI ACTAGT 1 cut(s) 134
SphI GCATGC 1 cut(s) 289
Sse9I AATT 6 cut(s) 484, 545, 581, 680, 1035, 1171
SseBI AGGCCT 1 cut(s) 350
SspI AATATT 1 cut(s) 535
SspMI CTAG 2 cut(s) 135, 690
StuI AGGCCT 1 cut(s) 350
StyD4I CCNGG 4 cut(s) 169, 357, 358, 653
TaiI ACGT 1 cut(s) 375
TaqI TCGA 2 cut(s) 488, 1086
TasI AATT 6 cut(s) 484, 545, 581, 680, 1035, 1171
TatI WGTACW 3 cut(s) 384, 744, 1224
TauI GCSGC 5 cut(s) 262, 402, 473, 601, 1274
TfiI GAWTC 3 cut(s) 338, 461, 1066
Tru1I TTAA 3 cut(s) 498, 531, 1318
Tru9I TTAA 3 cut(s) 498, 531, 1318
TscAI CASTG 2 cut(s) 246, 895
TseFI GTSAC 1 cut(s) 6
TseI GCWGC 6 cut(s) 803, 855, 904, 907, 930, 1126
Tsp45I GTSAC 1 cut(s) 6
TspDTI ATGAA 5 cut(s) 43, 382, 677, 1134, 1168
TspGWI ACGGA 1 cut(s) 603
TspMI CCCGGG 1 cut(s) 358
TspRI CASTG 2 cut(s) 246, 895
Van91I CCANNNNNTGG 3 cut(s) 91, 757, 1040
XapI RAATTY 1 cut(s) 484
XceI RCATGY 2 cut(s) 289, 575
XmaI CCCGGG 1 cut(s) 358
XmiI GTMKAC 1 cut(s) 210
XmnI GAANNNNTTC 1 cut(s) 1175
XspI CTAG 2 cut(s) 135, 690
ZrmI AGTACT 2 cut(s) 386, 746
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.