pycom09g15220

sugar phosphate phosphate translocator

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
15077833 .. 15081390
3558 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g15220.3

Sequence Viewer

Length: 522 bp
ATGACACAAATTCTTTTGCAGAAAGAAGATTATGGTTTGAGAAATCCGCTTACATTGATGAGCTATTTGACCCCAGTGATGGCAGTATTGACTGCCCTTCTCTCTCTTGCCTTTGATCCGTGGGACGAACTTAGAAAAAACAATTACTTCAACAATCCAGGGCATGTTGGTCGAAGTTGCTTGCTGATGCTTTTTGGTGGAACCCTTGCCTTTTTTATGGTATTAACAGAATTCATTCTTGTCTCCGTAACGAGTGCTGTCACAGTAACAATAGCAGGTGTTGTTAAGGAGGCTGTCACTATATTGGTTGCAGTCATTTACTTCCATGATGAATTTACCAGGTTGAAGGGAGCTGGACTCTTCATAATTATGCTTGGTGTTAGTTTATTCAACTGGTATAAATACGATAAGCTAAAGGCGCGTCATACAAGTGAAGATGACATGGAGGAACCAGTCACAACAAATGTTGCTGCAAAGTATGTTATTCTTGAGGAGACAGATGAGCAAGATGATGGCAGATGA

Protein Analysis

174

Amino Acids

19.5

Weight (kDa)

4.89

Isoelectric Point (pI)

35.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 266
Acc36I ACCTGC 1 cut(s) 266
AccII CGCG 1 cut(s) 421
AciI CCGC 1 cut(s) 47
AclWI GGATC 1 cut(s) 110
AcsI RAATTY 3 cut(s) 9, 230, 332
AfiI CCNNNNNNNGG 1 cut(s) 79
AgsI TTSAA 3 cut(s) 151, 346, 391
AjnI CCWGG 2 cut(s) 157, 338
AluBI AGCT 3 cut(s) 63, 353, 412
AluI AGCT 3 cut(s) 63, 353, 412
Alw26I GTCTC 2 cut(s) 247, 488
AlwI GGATC 1 cut(s) 110
ApeKI GCWGC 1 cut(s) 470
ApoI RAATTY 3 cut(s) 9, 230, 332
Asp700I GAANNNNTTC 1 cut(s) 234
AspLEI GCGC 1 cut(s) 421
BbvI GCAGC 1 cut(s) 457
BccI CCATC 2 cut(s) 73, 506
BcgI CGANNNNNNTGC 2 cut(s) 152, 186
BciT130I CCWGG 2 cut(s) 159, 340
BcoDI GTCTC 2 cut(s) 247, 488
BfuAI ACCTGC 1 cut(s) 266
BisI GCNGC 1 cut(s) 471
BlsI GCNGC 1 cut(s) 472
Bme1390I CCNGG 2 cut(s) 159, 340
BmiI GGNNCC 2 cut(s) 202, 450
BmrFI CCNGG 2 cut(s) 159, 340
BmrI ACTGGG 1 cut(s) 68
BmsI GCATC 1 cut(s) 177
BmuI ACTGGG 1 cut(s) 68
BplI GAGNNNNNCTC 2 cut(s) 342, 374
BpuEI CTTGAG 1 cut(s) 509
BsaJI CCNNGG 2 cut(s) 119, 158
Bsc4I CCNNNNNNNGG 1 cut(s) 79
Bse1I ACTGG 3 cut(s) 74, 398, 452
BseBI CCWGG 2 cut(s) 159, 340
BseDI CCNNGG 2 cut(s) 119, 158
BseLI CCNNNNNNNGG 1 cut(s) 79
BseNI ACTGG 3 cut(s) 74, 398, 452
BseRI GAGGAG 1 cut(s) 506
BseXI GCAGC 1 cut(s) 457
Bsh1236I CGCG 1 cut(s) 421
BslFI GGGAC 1 cut(s) 137
BslI CCNNNNNNNGG 1 cut(s) 79
BsmAI GTCTC 2 cut(s) 247, 488
BsmFI GGGAC 1 cut(s) 137
Bsp143I GATC 1 cut(s) 115
BspACI CCGC 1 cut(s) 47
BspFNI CGCG 1 cut(s) 421
BspLI GGNNCC 2 cut(s) 202, 450
BspMI ACCTGC 1 cut(s) 266
BspPI GGATC 1 cut(s) 110
BsrI ACTGG 3 cut(s) 74, 398, 452
BssECI CCNNGG 2 cut(s) 119, 158
BssMI GATC 1 cut(s) 115
Bst2UI CCWGG 2 cut(s) 159, 340
Bst4CI ACNGT 1 cut(s) 265
Bst6I CTCTTC 1 cut(s) 365
BstC8I GCNNGC 1 cut(s) 182
BstDEI CTNAG 1 cut(s) 131
BstDSI CCRYGG 1 cut(s) 119
BstFNI CGCG 1 cut(s) 421
BstHHI GCGC 1 cut(s) 421
BstKTI GATC 1 cut(s) 118
BstMAI GTCTC 2 cut(s) 247, 488
BstMBI GATC 1 cut(s) 115
BstMWI GCNNNNNNNGC 1 cut(s) 418
BstNI CCWGG 2 cut(s) 159, 340
BstNSI RCATGY 1 cut(s) 167
BstSCI CCNGG 2 cut(s) 157, 338
BstUI CGCG 1 cut(s) 421
BstV1I GCAGC 1 cut(s) 457
BtgI CCRYGG 1 cut(s) 119
BtsIMutI CAGTG 1 cut(s) 81
BveI ACCTGC 1 cut(s) 266
Cac8I GCNNGC 1 cut(s) 182
CfoI GCGC 1 cut(s) 421
CseI GACGC 1 cut(s) 410
CsiI ACCWGGT 1 cut(s) 338
CviAII CATG 3 cut(s) 164, 326, 442
CviJI RGCY 4 cut(s) 63, 293, 353, 412
CviKI_1 RGCY 4 cut(s) 63, 293, 353, 412
DdeI CTNAG 1 cut(s) 131
DpnI GATC 1 cut(s) 117
DpnII GATC 1 cut(s) 115
Eam1104I CTCTTC 1 cut(s) 365
EarI CTCTTC 1 cut(s) 365
EcoRI GAATTC 1 cut(s) 230
EcoRII CCWGG 2 cut(s) 157, 338
FaeI CATG 3 cut(s) 167, 329, 445
FaqI GGGAC 1 cut(s) 137
FatI CATG 3 cut(s) 163, 325, 441
Fnu4HI GCNGC 1 cut(s) 471
Fsp4HI GCNGC 1 cut(s) 471
GlaI GCGC 1 cut(s) 420
GluI GCNGC 1 cut(s) 471
HgaI GACGC 1 cut(s) 410
HhaI GCGC 1 cut(s) 421
Hin1II CATG 3 cut(s) 167, 329, 445
Hin6I GCGC 1 cut(s) 419
HinP1I GCGC 1 cut(s) 419
HinfI GANTC 1 cut(s) 357
Hpy188III TCNNGA 1 cut(s) 488
HpyAV CCTTC 2 cut(s) 107, 340
HpyCH4III ACNGT 1 cut(s) 265
HpyCH4V TGCA 3 cut(s) 19, 311, 473
HpyF10VI GCNNNNNNNGC 1 cut(s) 418
HpyF3I CTNAG 1 cut(s) 131
Hsp92II CATG 3 cut(s) 167, 329, 445
HspAI GCGC 1 cut(s) 419
Kzo9I GATC 1 cut(s) 115
LmnI GCTCC 1 cut(s) 350
LpnPI CCDG 9 cut(s) 87, 144, 171, 261, 325, 339, 352, 379, 465
Lsp1109I GCAGC 1 cut(s) 457
LweI GCATC 1 cut(s) 177
MabI ACCWGGT 1 cut(s) 338
MaeIII GTNAC 5 cut(s) 247, 259, 265, 295, 454
MalI GATC 1 cut(s) 117
MboI GATC 1 cut(s) 115
MboII GAAGA 3 cut(s) 38, 352, 446
MluCI AATT 5 cut(s) 9, 142, 230, 332, 366
MlyI GAGTC 1 cut(s) 351
MnlI CCTC 3 cut(s) 283, 439, 484
MroXI GAANNNNTTC 1 cut(s) 234
MseI TTAA 2 cut(s) 224, 285
MslI CAYNNNNRTG 2 cut(s) 368, 429
MspR9I CCNGG 2 cut(s) 159, 340
MvaI CCWGG 2 cut(s) 159, 340
MvnI CGCG 1 cut(s) 421
MwoI GCNNNNNNNGC 1 cut(s) 418
NdeII GATC 1 cut(s) 115
NlaIII CATG 3 cut(s) 167, 329, 445
NlaIV GGNNCC 2 cut(s) 202, 450
NmuCI GTSAC 3 cut(s) 259, 295, 454
NspI RCATGY 1 cut(s) 167
PaqCI CACCTGC 1 cut(s) 266
PdmI GAANNNNTTC 1 cut(s) 234
PkrI GCNGC 1 cut(s) 472
PleI GAGTC 1 cut(s) 351
PpsI GAGTC 1 cut(s) 351
Psp6I CCWGG 2 cut(s) 157, 338
PspGI CCWGG 2 cut(s) 157, 338
PspN4I GGNNCC 2 cut(s) 202, 450
RseI CAYNNNNRTG 2 cut(s) 368, 429
SaqAI TTAA 2 cut(s) 224, 285
SatI GCNGC 1 cut(s) 471
Sau3AI GATC 1 cut(s) 115
SchI GAGTC 1 cut(s) 351
ScrFI CCNGG 2 cut(s) 159, 340
SetI ASST 5 cut(s) 65, 280, 344, 355, 414
SexAI ACCWGGT 1 cut(s) 338
SfaNI GCATC 1 cut(s) 177
SmiMI CAYNNNNRTG 2 cut(s) 368, 429
SmlI CTYRAG 1 cut(s) 488
SmoI CTYRAG 1 cut(s) 488
Sse9I AATT 5 cut(s) 9, 142, 230, 332, 366
SsiI CCGC 1 cut(s) 47
StyD4I CCNGG 2 cut(s) 157, 338
TaaI ACNGT 1 cut(s) 265
TaqI TCGA 1 cut(s) 172
TasI AATT 5 cut(s) 9, 142, 230, 332, 366
Tru1I TTAA 2 cut(s) 224, 285
Tru9I TTAA 2 cut(s) 224, 285
TscAI CASTG 1 cut(s) 81
TseFI GTSAC 3 cut(s) 259, 295, 454
TseI GCWGC 1 cut(s) 470
Tsp45I GTSAC 3 cut(s) 259, 295, 454
TspDTI ATGAA 3 cut(s) 223, 345, 352
TspGWI ACGGA 2 cut(s) 108, 235
TspRI CASTG 1 cut(s) 81
XapI RAATTY 3 cut(s) 9, 230, 332
XceI RCATGY 1 cut(s) 167
XmnI GAANNNNTTC 1 cut(s) 234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.