Rorug02G0296000

sugar phosphate phosphate translocator

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
32818728 .. 32819395
668 bp
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UTR
Exon/CDS
Intron
Rorug02G0296000.1

Sequence Viewer

Length: 387 bp
ATGAAGGCGAACAATGATGAGGAAGGTGACTACAAGTTTCCAGTTGGAGAAGATTTTTACCCTGCCCTTCATAGAATGTTGGCATATAAGAAAGACTGGAGTGAAGACTTCTATTTTCGAGGTCGGGCCGTATTTGAGCTTGACATTTTAGAATGGATAGAAACTACCTCAACTGACTTTGAAAAAAACGCTATACAAAGCCGGGCCTATGGTGACTGTAAAAATTTCGTTCTTCCGAAACTGAGATCTCCGAAGCTTGAGCTGAAGATTTCAGAACGGGGAAAATTAGCTGTGTTCTTGGCATTATGGCTTAGCAGATCTGTTCTCCCCTCCAATAGTAGGAAGGTAAGGCCTGAGACGTTTTATATGGCCTCTTTGATGGCATAG

Protein Analysis

128

Amino Acids

14.99

Weight (kDa)

7.79

Isoelectric Point (pI)

60.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 223
AcuI CTGAAG 1 cut(s) 284
AfiI CCNNNNNNNGG 1 cut(s) 339
AgsI TTSAA 1 cut(s) 182
AluBI AGCT 4 cut(s) 139, 256, 262, 290
AluI AGCT 4 cut(s) 139, 256, 262, 290
Alw26I GTCTC 1 cut(s) 350
AoxI GGCC 4 cut(s) 126, 204, 350, 369
ApoI RAATTY 1 cut(s) 223
AspS9I GGNCC 2 cut(s) 126, 204
AsuC2I CCSGG 1 cut(s) 203
AsuHPI GGTGA 2 cut(s) 38, 224
BbsI GAAGAC 1 cut(s) 111
BccI CCATC 1 cut(s) 373
BceAI ACGGC 1 cut(s) 113
BcnI CCSGG 1 cut(s) 203
BcoDI GTCTC 1 cut(s) 350
BglII AGATCT 2 cut(s) 245, 317
BlpI GCTNAGC 1 cut(s) 311
Bme1390I CCNGG 1 cut(s) 203
BmgT120I GGNCC 2 cut(s) 126, 204
BmrFI CCNGG 1 cut(s) 203
BpiI GAAGAC 1 cut(s) 111
BpmI CTGGAG 1 cut(s) 118
Bpu1102I GCTNAGC 1 cut(s) 311
BpuEI CTTGAG 1 cut(s) 278
BpuMI CCSGG 1 cut(s) 203
Bsc4I CCNNNNNNNGG 1 cut(s) 339
Bse1I ACTGG 2 cut(s) 41, 101
BseLI CCNNNNNNNGG 1 cut(s) 339
BseMII CTCAG 2 cut(s) 233, 345
BseNI ACTGG 2 cut(s) 41, 101
BshFI GGCC 4 cut(s) 128, 206, 352, 371
BsiSI CCGG 1 cut(s) 202
BslI CCNNNNNNNGG 1 cut(s) 339
BsmAI GTCTC 1 cut(s) 350
BsmBI CGTCTC 1 cut(s) 350
BsnI GGCC 4 cut(s) 128, 206, 352, 371
Bsp143I GATC 2 cut(s) 245, 317
Bsp1720I GCTNAGC 1 cut(s) 311
BspANI GGCC 4 cut(s) 128, 206, 352, 371
BspCNI CTCAG 2 cut(s) 234, 346
BsrI ACTGG 2 cut(s) 41, 101
BssMI GATC 2 cut(s) 245, 317
Bst4CI ACNGT 1 cut(s) 218
BstDEI CTNAG 3 cut(s) 242, 311, 354
BstKTI GATC 2 cut(s) 248, 320
BstMAI GTCTC 1 cut(s) 350
BstMBI GATC 2 cut(s) 245, 317
BstSCI CCNGG 1 cut(s) 201
BstV2I GAAGAC 1 cut(s) 111
BstX2I RGATCY 2 cut(s) 245, 317
BstYI RGATCY 2 cut(s) 245, 317
BsuRI GGCC 4 cut(s) 128, 206, 352, 371
Cfr13I GGNCC 2 cut(s) 126, 204
DdeI CTNAG 3 cut(s) 242, 311, 354
DpnI GATC 2 cut(s) 247, 319
DpnII GATC 2 cut(s) 245, 317
Eco147I AGGCCT 1 cut(s) 352
Eco57I CTGAAG 1 cut(s) 284
Esp3I CGTCTC 1 cut(s) 350
FaiI YATR 9 cut(s) 72, 85, 87, 194, 210, 307, 366, 368, 385
GsuI CTGGAG 1 cut(s) 118
HaeIII GGCC 4 cut(s) 128, 206, 352, 371
HapII CCGG 1 cut(s) 202
HindIII AAGCTT 1 cut(s) 254
HpaII CCGG 1 cut(s) 202
HphI GGTGA 2 cut(s) 38, 224
Hpy188I TCNGA 3 cut(s) 237, 252, 274
HpyAV CCTTC 3 cut(s) 17, 77, 337
HpyCH4III ACNGT 1 cut(s) 218
HpyCH4IV ACGT 1 cut(s) 359
HpyF3I CTNAG 3 cut(s) 242, 311, 354
HpySE526I ACGT 1 cut(s) 359
Kzo9I GATC 2 cut(s) 245, 317
LpnPI CCDG 5 cut(s) 54, 75, 82, 215, 366
MaeII ACGT 1 cut(s) 359
MaeIII GTNAC 2 cut(s) 26, 212
MalI GATC 2 cut(s) 247, 319
MboI GATC 2 cut(s) 245, 317
MboII GAAGA 4 cut(s) 62, 116, 224, 277
MflI RGATCY 2 cut(s) 245, 317
MluCI AATT 2 cut(s) 223, 284
MmeI TCCRAC 1 cut(s) 25
MnlI CCTC 5 cut(s) 13, 113, 178, 340, 382
MspI CCGG 1 cut(s) 202
MspR9I CCNGG 1 cut(s) 203
NciI CCSGG 1 cut(s) 203
NdeII GATC 2 cut(s) 245, 317
NmuCI GTSAC 2 cut(s) 26, 212
PceI AGGCCT 1 cut(s) 352
PspPI GGNCC 2 cut(s) 126, 204
PsuI RGATCY 2 cut(s) 245, 317
Sau3AI GATC 2 cut(s) 245, 317
Sau96I GGNCC 2 cut(s) 126, 204
ScrFI CCNGG 1 cut(s) 203
SetI ASST 9 cut(s) 28, 124, 141, 170, 258, 264, 292, 348, 362
SmlI CTYRAG 1 cut(s) 257
SmoI CTYRAG 1 cut(s) 257
Sse9I AATT 2 cut(s) 223, 284
SseBI AGGCCT 1 cut(s) 352
StuI AGGCCT 1 cut(s) 352
StyD4I CCNGG 1 cut(s) 201
TaaI ACNGT 1 cut(s) 218
TaiI ACGT 1 cut(s) 362
TaqI TCGA 1 cut(s) 118
TasI AATT 2 cut(s) 223, 284
TseFI GTSAC 2 cut(s) 26, 212
Tsp45I GTSAC 2 cut(s) 26, 212
TspDTI ATGAA 2 cut(s) 17, 59
XapI RAATTY 1 cut(s) 223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.