pycom10g01330

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
1365438 .. 1366598
1161 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1161 bp
ATGGATGGTAGACTCTCAGCCTCTCTGGGCCTCCCCGCACCCAATCAAAACCACCACACTCAGTCGTCCAATGACTTCCACAACCTCTTCACCCATTTCATCACTCCAAATCCCCAAACTACTCTCACCTCTACCCAAAACCAGATCCCATTCTTTGCCTCCACCACCACCAACACCACCTCCTCCACCCTCAATTGGGCCTCCATTACCCGACCCAGTACCCGCCCCAAGAACCAAATCCTACTCAAGAACCTAACCGTCTTCGAGCGCGCCCTCATCGGCGCAGGCGGCGGAGGCATAGCCGGAGCCTTCACCTACTTCTGCCTCCATCCTCTGGACACCATTAAGACCAAGCTCCAGACCAAGGGCGCCTCAGACATTTACGCAAACACCTTCGATGCAGTTTTCAAGACCTTCCAAACCAAGGGCATTTCGGGGTTTTACAGCGGCATCTCCGCCGTCATCGTCGGCTCCACCGCCTCCTCCGCCGTCTACTTCGGCACCTGCGAACTGGGTAAGTCGGTTCTCTCCAAATTACCCAATTACCCTCCCGTTCTCATCCCTCCCACGGCCGGAGCCATGGGCAACATAATCTCTTCCGCGATAATGGTGCCCAAGGAGCTCATCACGCAGCGGATGCAAGCCGGGGCCAAAGGGAGGTCTTGGCAGGTGCTGCTCAAGATCCTCGAAAACGACGGCTTTCTGGGTCTTTACGCAGGGTACTCTGCCACGTTGCTTAGGAACTTGCCTGCGGGTGTGCTGAGCTATTCGTCGTTCGAGTACCTGAAATCGGCGGTGCTGAGCAAGACGAAGCAGACCAACTTGGAGCCGATACAGAGCGTGGTGTGTGGGGCGTTGGCCGGAGCAATATCAGCCTCCATTACGACGCCACTTGATGTGGTGAAGACGAGGCTGATGACTGGTGCGGCGCAGGGCGGGGTTTCGGGGACGGTGAAGCAGATTTTAATGGAGGAGGGGTGGGTGGGGTTTACGAGAGGAGTGGGACCCAGAGTTCTTCACAGCGCTTGCTTTTCGGCATTGGGTTACTTTGCTTTCGAGACTGCCAGGCTTGCCATTCTGAATCAGTATATTAAGAGGAAGGAGCTGCAGCAGATGCAAGATTTCGGTGTCAATGTTGGTGTTGGTGTTGCTTCCACTTGA

Protein Analysis

387

Amino Acids

41.11

Weight (kDa)

9.61

Isoelectric Point (pI)

25.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 97 - 177 2.1e-18 Mitochondrial carrier protein
Mito_carr PF00153 190 - 267 6.1e-13 Mitochondrial carrier protein
Mito_carr PF00153 275 - 359 8.2e-18 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 512, 658
Acc36I ACCTGC 2 cut(s) 512, 658
AccB1I GGYRCC 3 cut(s) 368, 500, 610
AccB7I CCANNNNNTGG 1 cut(s) 334
AccI GTMKAC 2 cut(s) 10, 492
AccII CGCG 2 cut(s) 270, 602
AclWI GGATC 2 cut(s) 139, 676
AcoI YGGCCR 2 cut(s) 570, 858
AcyI GRCGYC 2 cut(s) 369, 887
AfaI GTAC 3 cut(s) 220, 722, 782
AfeI AGCGCT 1 cut(s) 1024
AfiI CCNNNNNNNGG 9 cut(s) 195, 196, 334, 364, 424, 568, 572, 657, 790
AgsI TTSAA 1 cut(s) 409
AjnI CCWGG 1 cut(s) 1064
AloI GAACNNNNNNTCC 2 cut(s) 996, 1028
AluBI AGCT 4 cut(s) 355, 622, 765, 1105
AluI AGCT 4 cut(s) 355, 622, 765, 1105
Alw21I GWGCWC 1 cut(s) 624
Alw26I GTCTC 1 cut(s) 1052
AlwI GGATC 2 cut(s) 139, 676
AlwNI CAGNNNCTG 1 cut(s) 673
Aor51HI AGCGCT 1 cut(s) 1024
AoxI GGCC 5 cut(s) 28, 198, 570, 648, 858
ApeKI GCWGC 4 cut(s) 631, 673, 1105, 1108
AspLEI GCGC 6 cut(s) 270, 272, 284, 371, 931, 1025
AspS9I GGNCC 4 cut(s) 28, 198, 648, 1004
AsuC2I CCSGG 1 cut(s) 646
AsuHPI GGTGA 5 cut(s) 82, 118, 304, 913, 964
AvaII GGWCC 1 cut(s) 1004
BaeGI GKGCMC 1 cut(s) 615
BanI GGYRCC 3 cut(s) 368, 500, 610
BanII GRGCYC 1 cut(s) 624
BbsI GAAGAC 2 cut(s) 253, 911
Bbv12I GWGCWC 1 cut(s) 624
BbvI GCAGC 4 cut(s) 643, 660, 1092, 1120
BccI CCATC 1 cut(s) 336
BceAI ACGGC 4 cut(s) 443, 473, 585, 712
BcgI CGANNNNNNTGC 2 cut(s) 592, 626
BciT130I CCWGG 1 cut(s) 1066
BcnI CCSGG 1 cut(s) 646
BcoDI GTCTC 1 cut(s) 1052
BfmI CTRYAG 1 cut(s) 1106
BfoI RGCGCY 2 cut(s) 372, 1026
BfuAI ACCTGC 2 cut(s) 512, 658
BisI GCNGC 7 cut(s) 289, 448, 632, 674, 927, 1106, 1109
BlpI GCTNAGC 2 cut(s) 761, 800
BlsI GCNGC 7 cut(s) 290, 449, 633, 675, 928, 1107, 1110
Bme1390I CCNGG 2 cut(s) 646, 1066
Bme18I GGWCC 1 cut(s) 1004
BmgT120I GGNCC 4 cut(s) 28, 198, 648, 1004
BmrFI CCNGG 2 cut(s) 646, 1066
BmrI ACTGGG 2 cut(s) 210, 521
BmsI GCATC 4 cut(s) 388, 459, 627, 1104
BmuI ACTGGG 2 cut(s) 210, 521
BpiI GAAGAC 2 cut(s) 253, 911
BpmI CTGGAG 1 cut(s) 341
Bpu10I CCTNAGC 1 cut(s) 737
Bpu1102I GCTNAGC 2 cut(s) 761, 800
BpuEI CTTGAG 2 cut(s) 230, 662
BpuMI CCSGG 1 cut(s) 646
BsaHI GRCGYC 2 cut(s) 369, 887
BsaJI CCNNGG 6 cut(s) 363, 423, 567, 579, 615, 645
BsaXI ACNNNNNCTCC 4 cut(s) 164, 194, 962, 992
Bsc4I CCNNNNNNNGG 9 cut(s) 195, 196, 334, 364, 424, 568, 572, 657, 790
Bse1I ACTGG 3 cut(s) 216, 516, 925
BseBI CCWGG 1 cut(s) 1066
BseDI CCNNGG 6 cut(s) 363, 423, 567, 579, 615, 645
BseGI GGATG 4 cut(s) 10, 328, 558, 642
BseLI CCNNNNNNNGG 9 cut(s) 195, 196, 334, 364, 424, 568, 572, 657, 790
BseMII CTCAG 5 cut(s) 30, 74, 387, 752, 791
BseNI ACTGG 3 cut(s) 216, 516, 925
BsePI GCGCGC 1 cut(s) 268
BseRI GAGGAG 4 cut(s) 172, 472, 986, 1011
BseSI GKGCMC 1 cut(s) 615
BseX3I CGGCCG 1 cut(s) 570
BseXI GCAGC 4 cut(s) 643, 660, 1092, 1120
Bsh1236I CGCG 2 cut(s) 270, 602
Bsh1285I CGRYCG 1 cut(s) 573
BshFI GGCC 5 cut(s) 30, 200, 572, 650, 860
BshNI GGYRCC 3 cut(s) 368, 500, 610
BsiEI CGRYCG 1 cut(s) 573
BsiHKAI GWGCWC 1 cut(s) 624
BsiSI CCGG 4 cut(s) 303, 573, 645, 861
BslFI GGGAC 2 cut(s) 961, 1017
BslI CCNNNNNNNGG 9 cut(s) 195, 196, 334, 364, 424, 568, 572, 657, 790
BsmAI GTCTC 1 cut(s) 1052
BsmFI GGGAC 2 cut(s) 961, 1017
BsnI GGCC 5 cut(s) 30, 200, 572, 650, 860
Bsp1286I GDGCHC 2 cut(s) 615, 624
Bsp143I GATC 2 cut(s) 144, 681
Bsp1720I GCTNAGC 2 cut(s) 761, 800
Bsp19I CCATGG 1 cut(s) 579
BspANI GGCC 5 cut(s) 30, 200, 572, 650, 860
BspCNI CTCAG 5 cut(s) 29, 73, 386, 753, 792
BspFNI CGCG 2 cut(s) 270, 602
BspMAI CTGCAG 1 cut(s) 1110
BspMI ACCTGC 2 cut(s) 512, 658
BspPI GGATC 2 cut(s) 139, 676
BspT107I GGYRCC 3 cut(s) 368, 500, 610
BsrI ACTGG 3 cut(s) 216, 516, 925
BssECI CCNNGG 6 cut(s) 363, 423, 567, 579, 615, 645
BssHII GCGCGC 1 cut(s) 268
BssMI GATC 2 cut(s) 144, 681
BssNI GRCGYC 2 cut(s) 369, 887
BssT1I CCWWGG 4 cut(s) 363, 423, 579, 615
Bst2UI CCWGG 1 cut(s) 1066
Bst4CI ACNGT 2 cut(s) 259, 952
Bst6I CTCTTC 2 cut(s) 92, 601
BstACI GRCGYC 2 cut(s) 369, 887
BstAPI GCANNNNNTGC 3 cut(s) 637, 673, 1114
BstC8I GCNNGC 6 cut(s) 270, 286, 642, 750, 1027, 1071
BstDEI CTNAG 6 cut(s) 16, 60, 373, 737, 761, 800
BstDSI CCRYGG 2 cut(s) 567, 579
BstF5I GGATG 4 cut(s) 10, 328, 558, 642
BstFNI CGCG 2 cut(s) 270, 602
BstH2I RGCGCY 2 cut(s) 372, 1026
BstHHI GCGC 6 cut(s) 270, 272, 284, 371, 931, 1025
BstKTI GATC 2 cut(s) 147, 684
BstMAI GTCTC 1 cut(s) 1052
BstMBI GATC 2 cut(s) 144, 681
BstMCI CGRYCG 1 cut(s) 573
BstNI CCWGG 1 cut(s) 1066
BstSCI CCNGG 2 cut(s) 644, 1064
BstSFI CTRYAG 1 cut(s) 1106
BstSLI GKGCMC 1 cut(s) 615
BstUI CGCG 2 cut(s) 270, 602
BstV1I GCAGC 4 cut(s) 643, 660, 1092, 1120
BstV2I GAAGAC 2 cut(s) 253, 911
BstX2I RGATCY 2 cut(s) 144, 681
BstYI RGATCY 2 cut(s) 144, 681
BstZI CGGCCG 1 cut(s) 570
BsuRI GGCC 5 cut(s) 30, 200, 572, 650, 860
BtgI CCRYGG 2 cut(s) 567, 579
BtsCI GGATG 4 cut(s) 10, 328, 558, 642
BveI ACCTGC 2 cut(s) 512, 658
Cac8I GCNNGC 6 cut(s) 270, 286, 642, 750, 1027, 1071
CaiI CAGNNNCTG 1 cut(s) 673
CfoI GCGC 6 cut(s) 270, 272, 284, 371, 931, 1025
Cfr13I GGNCC 4 cut(s) 28, 198, 648, 1004
CseI GACGC 1 cut(s) 895
Csp6I GTAC 3 cut(s) 219, 721, 781
CviAII CATG 1 cut(s) 580
CviQI GTAC 3 cut(s) 219, 721, 781
DdeI CTNAG 6 cut(s) 16, 60, 373, 737, 761, 800
DinI GGCGCC 1 cut(s) 370
DpnI GATC 2 cut(s) 146, 683
DpnII GATC 2 cut(s) 144, 681
EaeI YGGCCR 2 cut(s) 570, 858
EagI CGGCCG 1 cut(s) 570
Eam1104I CTCTTC 2 cut(s) 92, 601
EarI CTCTTC 2 cut(s) 92, 601
EciI GGCGGA 3 cut(s) 306, 445, 475
Ecl136II GAGCTC 1 cut(s) 622
EclXI CGGCCG 1 cut(s) 570
Eco130I CCWWGG 4 cut(s) 363, 423, 579, 615
Eco24I GRGCYC 1 cut(s) 624
Eco47I GGWCC 1 cut(s) 1004
Eco47III AGCGCT 1 cut(s) 1024
Eco52I CGGCCG 1 cut(s) 570
Eco53kI GAGCTC 1 cut(s) 622
EcoICRI GAGCTC 1 cut(s) 622
EcoO109I RGGNCCY 1 cut(s) 1004
EcoRII CCWGG 1 cut(s) 1064
EcoT14I CCWWGG 4 cut(s) 363, 423, 579, 615
EcoT38I GRGCYC 1 cut(s) 624
EgeI GGCGCC 1 cut(s) 370
EheI GGCGCC 1 cut(s) 370
ErhI CCWWGG 4 cut(s) 363, 423, 579, 615
FaeI CATG 1 cut(s) 583
FaiI YATR 4 cut(s) 299, 581, 590, 1089
FaqI GGGAC 2 cut(s) 961, 1017
FatI CATG 1 cut(s) 579
FauI CCCGC 4 cut(s) 43, 230, 745, 929
FblI GTMKAC 2 cut(s) 10, 492
Fnu4HI GCNGC 7 cut(s) 289, 448, 632, 674, 927, 1106, 1109
FokI GGATG 4 cut(s) 17, 315, 545, 649
FriOI GRGCYC 1 cut(s) 624
Fsp4HI GCNGC 7 cut(s) 289, 448, 632, 674, 927, 1106, 1109
GlaI GCGC 6 cut(s) 269, 271, 283, 370, 930, 1024
GluI GCNGC 7 cut(s) 289, 448, 632, 674, 927, 1106, 1109
GsuI CTGGAG 1 cut(s) 341
HaeII RGCGCY 2 cut(s) 372, 1026
HaeIII GGCC 5 cut(s) 30, 200, 572, 650, 860
HapII CCGG 4 cut(s) 303, 573, 645, 861
HgaI GACGC 1 cut(s) 895
HhaI GCGC 6 cut(s) 270, 272, 284, 371, 931, 1025
Hin1I GRCGYC 2 cut(s) 369, 887
Hin1II CATG 1 cut(s) 583
Hin6I GCGC 6 cut(s) 268, 270, 282, 369, 929, 1023
HinP1I GCGC 6 cut(s) 268, 270, 282, 369, 929, 1023
HinfI GANTC 2 cut(s) 12, 1081
HpaII CCGG 4 cut(s) 303, 573, 645, 861
HphI GGTGA 5 cut(s) 82, 118, 304, 913, 964
Hpy166II GTNNAC 3 cut(s) 11, 493, 990
Hpy188I TCNGA 2 cut(s) 376, 1080
Hpy188III TCNNGA 6 cut(s) 247, 335, 358, 409, 679, 1057
Hpy8I GTNNAC 3 cut(s) 11, 493, 990
Hpy99I CGWCG 4 cut(s) 470, 698, 775, 889
HpyAV CCTTC 4 cut(s) 319, 403, 424, 1093
HpyCH4III ACNGT 2 cut(s) 259, 952
HpyCH4IV ACGT 1 cut(s) 731
HpyCH4V TGCA 4 cut(s) 401, 640, 1108, 1117
HpyF3I CTNAG 6 cut(s) 16, 60, 373, 737, 761, 800
HpySE526I ACGT 1 cut(s) 731
Hsp92I GRCGYC 2 cut(s) 369, 887
Hsp92II CATG 1 cut(s) 583
HspAI GCGC 6 cut(s) 268, 270, 282, 369, 929, 1023
KasI GGCGCC 1 cut(s) 368
KflI GGGWCCC 1 cut(s) 1004
Kzo9I GATC 2 cut(s) 144, 681
LmnI GCTCC 8 cut(s) 305, 360, 476, 575, 619, 826, 863, 1102
Lsp1109I GCAGC 4 cut(s) 643, 660, 1092, 1120
LweI GCATC 4 cut(s) 388, 459, 627, 1104
MaeII ACGT 1 cut(s) 731
MaeIII GTNAC 1 cut(s) 1043
MalI GATC 2 cut(s) 146, 683
MboI GATC 2 cut(s) 144, 681
MboII GAAGA 5 cut(s) 79, 253, 588, 916, 1007
MfeI CAATTG 1 cut(s) 193
MflI RGATCY 2 cut(s) 144, 681
MhlI GDGCHC 2 cut(s) 615, 624
MluCI AATT 3 cut(s) 193, 533, 541
Mly113I GGCGCC 1 cut(s) 369
MlyI GAGTC 1 cut(s) 6
MseI TTAA 3 cut(s) 345, 965, 1092
MspA1I CMGCKG 2 cut(s) 447, 634
MspI CCGG 4 cut(s) 303, 573, 645, 861
MspR9I CCNGG 2 cut(s) 646, 1066
MunI CAATTG 1 cut(s) 193
MvaI CCWGG 1 cut(s) 1066
MvnI CGCG 2 cut(s) 270, 602
NarI GGCGCC 1 cut(s) 369
NciI CCSGG 1 cut(s) 646
NcoI CCATGG 1 cut(s) 579
NdeII GATC 2 cut(s) 144, 681
NlaIII CATG 1 cut(s) 583
PaqCI CACCTGC 2 cut(s) 512, 658
PauI GCGCGC 1 cut(s) 268
PcsI WCGNNNNNNNCGW 1 cut(s) 504
PfeI GAWTC 1 cut(s) 1081
PflMI CCANNNNNTGG 1 cut(s) 334
PkrI GCNGC 7 cut(s) 290, 449, 633, 675, 928, 1107, 1110
PleI GAGTC 1 cut(s) 6
PluTI GGCGCC 1 cut(s) 372
PpsI GAGTC 1 cut(s) 6
PpuMI RGGWCCY 1 cut(s) 1004
Psp124BI GAGCTC 1 cut(s) 624
Psp5II RGGWCCY 1 cut(s) 1004
Psp6I CCWGG 1 cut(s) 1064
PspGI CCWGG 1 cut(s) 1064
PspPI GGNCC 4 cut(s) 28, 198, 648, 1004
PspPPI RGGWCCY 1 cut(s) 1004
PstI CTGCAG 1 cut(s) 1110
PstNI CAGNNNCTG 1 cut(s) 673
PsuI RGATCY 2 cut(s) 144, 681
PteI GCGCGC 1 cut(s) 268
RsaI GTAC 3 cut(s) 220, 722, 782
RsaNI GTAC 3 cut(s) 219, 721, 781
SacI GAGCTC 1 cut(s) 624
SaqAI TTAA 3 cut(s) 345, 965, 1092
SatI GCNGC 7 cut(s) 289, 448, 632, 674, 927, 1106, 1109
Sau3AI GATC 2 cut(s) 144, 681
Sau96I GGNCC 4 cut(s) 28, 198, 648, 1004
SchI GAGTC 1 cut(s) 6
ScrFI CCNGG 2 cut(s) 646, 1066
SduI GDGCHC 2 cut(s) 615, 624
SfaNI GCATC 4 cut(s) 388, 459, 627, 1104
SfcI CTRYAG 1 cut(s) 1106
SfoI GGCGCC 1 cut(s) 370
SinI GGWCC 1 cut(s) 1004
SmlI CTYRAG 2 cut(s) 245, 677
SmoI CTYRAG 2 cut(s) 245, 677
Sse9I AATT 3 cut(s) 193, 533, 541
SspDI GGCGCC 1 cut(s) 368
SstI GAGCTC 1 cut(s) 624
StyD4I CCNGG 2 cut(s) 644, 1064
StyI CCWWGG 4 cut(s) 363, 423, 579, 615
TaaI ACNGT 2 cut(s) 259, 952
TaiI ACGT 1 cut(s) 734
TaqI TCGA 5 cut(s) 264, 396, 687, 777, 1056
TasI AATT 3 cut(s) 193, 533, 541
TauI GCSGC 3 cut(s) 291, 450, 929
TfiI GAWTC 1 cut(s) 1081
Tru1I TTAA 3 cut(s) 345, 965, 1092
Tru9I TTAA 3 cut(s) 345, 965, 1092
TseI GCWGC 4 cut(s) 631, 673, 1105, 1108
TspDTI ATGAA 1 cut(s) 88
Van91I CCANNNNNTGG 1 cut(s) 334
VpaK11BI GGWCC 1 cut(s) 1004
XmiI GTMKAC 2 cut(s) 10, 492
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.