pycom10g06110

BURP domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0007143
Physical Location & Seq
Forward (+)
6869807 .. 6870822
1016 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 912 bp
ATGGTAAGCACTAGTAAGTTCAAAGGAAGGAACATGGAGACAGGACTTGTGCTCTTGATCCCTATACTTCATCTCCTACTGCTTGTCATGTGTCCTCAGGGAATCGAAGGAAGAGACTTTATGGATCGAAGAATTCGTGCTAAGACAGATGGTGATAATGGCCATGAAACTACACATCATGACCATGCTCATCATGCTCATCCATCATCCCACATGCATCACATGGACCATTCCCTCATGATTTTCTTCACCTTGAAGGACCTAAAGCTGGGGAAAACAATGGCCATCTATTTTCCCAAAAGAAACCCTTCAAAATCTCCCCACTTGTTGCCAAGAGTAGAAGCTGAATTATTTCCCTTCTCCTCAAAACAACTCCACCACCTTCTTCAAGTTTTTTCCTTCTCTCAAGACTCTCCCCAAGCCAAAGCCATGGAAGATACTCTTAGACAATGTGAGACTGAACCCATCAAGGGAGAGATCAAGTCATGTGCTACTTCTTTAGAATCCATGCTTGACTTTGCACGCAGCATCTTCGGATTGGATAATACTTTCAGTGTTGTGTCCACTACCCATCTCACAAACTCATCCACCCATTTCCAGAACTACACTATTTTGGAAGAGCCTAAAGAGGTTTTAGCTCCCAAGATGGTGGCATGTCACACCATGCCTTACCCTTATGCGGTTTTCTACTGTCACAGCCAAGAAAGCATGAACAAGGTTTACAAGGTTTCATTAGGTGGTGAGGATGGAGATAGAGTGGATGCTGTTGCTGTTTGCCACTTGGACACCTCTCAGTGGAGCCCTAATCATGCTTCATTTCAAGTCCTTAGGATTAAGCCCGGGTCTTCCCCTGTGTGCCATTTCTTTCCTGCTGATAATCTTGTATGGATTCCAACCTCCACTTCTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BURP

Protein Analysis

304

Amino Acids

34.18

Weight (kDa)

6.73

Isoelectric Point (pI)

51.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BURP PF03181 81 - 297 1.3e-83 BURP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 680
AclWI GGATC 2 cut(s) 52, 132
AcoI YGGCCR 2 cut(s) 160, 282
AcsI RAATTY 1 cut(s) 132
AfiI CCNNNNNNNGG 4 cut(s) 268, 470, 679, 795
AgsI TTSAA 5 cut(s) 22, 256, 312, 389, 821
AhlI ACTAGT 1 cut(s) 11
AjuI GAANNNNNNNTTGG 1 cut(s) 886
AleI CACNNNNGTG 1 cut(s) 905
AluBI AGCT 3 cut(s) 268, 344, 638
AluI AGCT 3 cut(s) 268, 344, 638
Alw21I GWGCWC 1 cut(s) 54
Alw26I GTCTC 3 cut(s) 32, 108, 449
AlwI GGATC 2 cut(s) 52, 132
Ama87I CYCGRG 1 cut(s) 839
AoxI GGCC 2 cut(s) 160, 282
ApeKI GCWGC 1 cut(s) 525
ApoI RAATTY 1 cut(s) 132
Asp700I GAANNNNTTC 2 cut(s) 307, 351
AspS9I GGNCC 2 cut(s) 226, 259
AsuC2I CCSGG 2 cut(s) 840, 841
AsuHPI GGTGA 3 cut(s) 164, 241, 752
AvaI CYCGRG 1 cut(s) 839
AvaII GGWCC 2 cut(s) 226, 259
AxyI CCTNAGG 2 cut(s) 96, 827
BalI TGGCCA 2 cut(s) 162, 284
BanII GRGCYC 1 cut(s) 803
BbsI GAAGAC 1 cut(s) 837
Bbv12I GWGCWC 1 cut(s) 54
BbvI GCAGC 1 cut(s) 537
BccI CCATC 7 cut(s) 143, 211, 293, 473, 579, 640, 740
BcgI CGANNNNNNTGC 2 cut(s) 514, 548
BcnI CCSGG 2 cut(s) 840, 841
BcoDI GTCTC 3 cut(s) 32, 108, 449
BcuI ACTAGT 1 cut(s) 11
BfaI CTAG 1 cut(s) 12
BisI GCNGC 1 cut(s) 526
BlsI GCNGC 1 cut(s) 527
Bme1390I CCNGG 2 cut(s) 840, 841
Bme18I GGWCC 2 cut(s) 226, 259
BmeT110I CYCGRG 1 cut(s) 839
BmgT120I GGNCC 2 cut(s) 226, 259
BmiI GGNNCC 1 cut(s) 800
BmrFI CCNGG 2 cut(s) 840, 841
BmsI GCATC 3 cut(s) 226, 537, 751
BpiI GAAGAC 1 cut(s) 837
BpuEI CTTGAG 1 cut(s) 390
BpuMI CCSGG 2 cut(s) 840, 841
BsaJI CCNNGG 2 cut(s) 429, 839
BsaXI ACNNNNNCTCC 4 cut(s) 57, 87, 741, 771
Bsc4I CCNNNNNNNGG 4 cut(s) 268, 470, 679, 795
Bse21I CCTNAGG 2 cut(s) 96, 827
BseDI CCNNGG 2 cut(s) 429, 839
BseGI GGATG 5 cut(s) 199, 206, 584, 751, 766
BseLI CCNNNNNNNGG 4 cut(s) 268, 470, 679, 795
BseMII CTCAG 2 cut(s) 110, 806
BseRI GAGGAG 1 cut(s) 352
BseXI GCAGC 1 cut(s) 537
BseYI CCCAGC 1 cut(s) 268
BshFI GGCC 2 cut(s) 162, 284
BsiHKAI GWGCWC 1 cut(s) 54
BsiHKCI CYCGRG 1 cut(s) 839
BsiSI CCGG 1 cut(s) 840
BslI CCNNNNNNNGG 4 cut(s) 268, 470, 679, 795
BsmAI GTCTC 3 cut(s) 32, 108, 449
BsnI GGCC 2 cut(s) 162, 284
BsoBI CYCGRG 1 cut(s) 839
Bsp1286I GDGCHC 2 cut(s) 54, 803
Bsp143I GATC 3 cut(s) 57, 124, 477
Bsp19I CCATGG 1 cut(s) 429
BspACI CCGC 1 cut(s) 680
BspANI GGCC 2 cut(s) 162, 284
BspCNI CTCAG 2 cut(s) 109, 805
BspHI TCATGA 2 cut(s) 178, 237
BspLI GGNNCC 1 cut(s) 800
BspPI GGATC 2 cut(s) 52, 132
BspQI GCTCTTC 1 cut(s) 612
BssECI CCNNGG 2 cut(s) 429, 839
BssMI GATC 3 cut(s) 57, 124, 477
BssT1I CCWWGG 1 cut(s) 429
Bst4CI ACNGT 1 cut(s) 692
Bst6I CTCTTC 2 cut(s) 106, 612
BstC8I GCNNGC 1 cut(s) 523
BstDEI CTNAG 5 cut(s) 96, 141, 443, 792, 827
BstDSI CCRYGG 1 cut(s) 429
BstF5I GGATG 5 cut(s) 199, 206, 584, 751, 766
BstKTI GATC 3 cut(s) 60, 127, 480
BstMAI GTCTC 3 cut(s) 32, 108, 449
BstMBI GATC 3 cut(s) 57, 124, 477
BstMWI GCNNNNNNNGC 2 cut(s) 194, 705
BstNSI RCATGY 2 cut(s) 217, 657
BstSCI CCNGG 2 cut(s) 838, 839
BstV1I GCAGC 1 cut(s) 537
BstV2I GAAGAC 1 cut(s) 837
BstXI CCANNNNNNTGG 2 cut(s) 430, 649
Bsu36I CCTNAGG 2 cut(s) 96, 827
BsuRI GGCC 2 cut(s) 162, 284
BtgI CCRYGG 1 cut(s) 429
BtsCI GGATG 5 cut(s) 199, 206, 584, 751, 766
BtsIMutI CAGTG 2 cut(s) 559, 800
Cac8I GCNNGC 1 cut(s) 523
CciI TCATGA 2 cut(s) 178, 237
Cfr13I GGNCC 2 cut(s) 226, 259
Cfr9I CCCGGG 1 cut(s) 839
DdeI CTNAG 5 cut(s) 96, 141, 443, 792, 827
DpnI GATC 3 cut(s) 59, 126, 479
DpnII GATC 3 cut(s) 57, 124, 477
EaeI YGGCCR 2 cut(s) 160, 282
Eam1104I CTCTTC 2 cut(s) 106, 612
EarI CTCTTC 2 cut(s) 106, 612
Eco130I CCWWGG 1 cut(s) 429
Eco24I GRGCYC 1 cut(s) 803
Eco47I GGWCC 2 cut(s) 226, 259
Eco81I CCTNAGG 2 cut(s) 96, 827
Eco88I CYCGRG 1 cut(s) 839
EcoO109I RGGNCCY 1 cut(s) 259
EcoRI GAATTC 1 cut(s) 132
EcoT14I CCWWGG 1 cut(s) 429
EcoT22I ATGCAT 1 cut(s) 219
EcoT38I GRGCYC 1 cut(s) 803
ErhI CCWWGG 1 cut(s) 429
FalI AAGNNNNNCTT 4 cut(s) 292, 324, 426, 458
Fnu4HI GCNGC 1 cut(s) 526
FokI GGATG 5 cut(s) 186, 193, 571, 758, 773
FriOI GRGCYC 1 cut(s) 803
Fsp4HI GCNGC 1 cut(s) 526
FspBI CTAG 1 cut(s) 12
GluI GCNGC 1 cut(s) 526
GsaI CCCAGC 1 cut(s) 272
HaeIII GGCC 2 cut(s) 162, 284
HapII CCGG 1 cut(s) 840
HinfI GANTC 4 cut(s) 102, 410, 503, 889
HpaII CCGG 1 cut(s) 840
HphI GGTGA 3 cut(s) 164, 241, 752
Hpy166II GTNNAC 2 cut(s) 564, 721
Hpy188I TCNGA 1 cut(s) 536
Hpy188III TCNNGA 5 cut(s) 55, 179, 238, 407, 598
Hpy8I GTNNAC 2 cut(s) 564, 721
HpyAV CCTTC 7 cut(s) 21, 101, 250, 318, 367, 392, 409
HpyCH4III ACNGT 1 cut(s) 692
HpyCH4V TGCA 2 cut(s) 217, 521
HpyF10VI GCNNNNNNNGC 2 cut(s) 194, 705
HpyF3I CTNAG 5 cut(s) 96, 141, 443, 792, 827
Kzo9I GATC 3 cut(s) 57, 124, 477
LguI GCTCTTC 1 cut(s) 612
LmnI GCTCC 2 cut(s) 643, 798
LpnPI CCDG 7 cut(s) 27, 83, 254, 611, 853, 864, 882
Lsp1109I GCAGC 1 cut(s) 537
LweI GCATC 3 cut(s) 226, 537, 751
MaeI CTAG 1 cut(s) 12
MaeIII GTNAC 2 cut(s) 656, 692
MalI GATC 3 cut(s) 59, 126, 479
MboI GATC 3 cut(s) 57, 124, 477
MboII GAAGA 8 cut(s) 123, 141, 238, 377, 446, 523, 629, 837
MhlI GDGCHC 2 cut(s) 54, 803
MlsI TGGCCA 2 cut(s) 162, 284
MluCI AATT 2 cut(s) 132, 347
MluNI TGGCCA 2 cut(s) 162, 284
MlyI GAGTC 1 cut(s) 404
MnlI CCTC 7 cut(s) 105, 245, 373, 622, 736, 799, 907
Mox20I TGGCCA 2 cut(s) 162, 284
Mph1103I ATGCAT 1 cut(s) 219
MroXI GAANNNNTTC 2 cut(s) 307, 351
MscI TGGCCA 2 cut(s) 162, 284
MseI TTAA 1 cut(s) 834
MslI CAYNNNNRTG 2 cut(s) 183, 905
Msp20I TGGCCA 2 cut(s) 162, 284
MspI CCGG 1 cut(s) 840
MspR9I CCNGG 2 cut(s) 840, 841
MwoI GCNNNNNNNGC 2 cut(s) 194, 705
NciI CCSGG 2 cut(s) 840, 841
NcoI CCATGG 1 cut(s) 429
NdeII GATC 3 cut(s) 57, 124, 477
NlaIV GGNNCC 1 cut(s) 800
NmuCI GTSAC 2 cut(s) 656, 692
NsiI ATGCAT 1 cut(s) 219
NspI RCATGY 2 cut(s) 217, 657
OliI CACNNNNGTG 1 cut(s) 905
PagI TCATGA 2 cut(s) 178, 237
PciSI GCTCTTC 1 cut(s) 612
PcsI WCGNNNNNNNCGW 1 cut(s) 133
PdmI GAANNNNTTC 2 cut(s) 307, 351
PfeI GAWTC 3 cut(s) 102, 503, 889
PkrI GCNGC 1 cut(s) 527
PleI GAGTC 1 cut(s) 404
PpsI GAGTC 1 cut(s) 404
PpuMI RGGWCCY 1 cut(s) 259
Psp5II RGGWCCY 1 cut(s) 259
PspFI CCCAGC 1 cut(s) 268
PspN4I GGNNCC 1 cut(s) 800
PspPI GGNCC 2 cut(s) 226, 259
PspPPI RGGWCCY 1 cut(s) 259
PsrI GAACNNNNNNTAC 2 cut(s) 704, 736
RseI CAYNNNNRTG 2 cut(s) 183, 905
SapI GCTCTTC 1 cut(s) 612
SaqAI TTAA 1 cut(s) 834
SatI GCNGC 1 cut(s) 526
Sau3AI GATC 3 cut(s) 57, 124, 477
Sau96I GGNCC 2 cut(s) 226, 259
SchI GAGTC 1 cut(s) 404
ScrFI CCNGG 2 cut(s) 840, 841
SduI GDGCHC 2 cut(s) 54, 803
SfaNI GCATC 3 cut(s) 226, 537, 751
SinI GGWCC 2 cut(s) 226, 259
SmaI CCCGGG 1 cut(s) 841
SmiMI CAYNNNNRTG 2 cut(s) 183, 905
SmlI CTYRAG 1 cut(s) 405
SmoI CTYRAG 1 cut(s) 405
SpeI ACTAGT 1 cut(s) 11
Sse9I AATT 2 cut(s) 132, 347
SsiI CCGC 1 cut(s) 680
SspMI CTAG 1 cut(s) 12
StyD4I CCNGG 2 cut(s) 838, 839
StyI CCWWGG 1 cut(s) 429
TaaI ACNGT 1 cut(s) 692
TaqI TCGA 2 cut(s) 105, 127
TasI AATT 2 cut(s) 132, 347
TfiI GAWTC 3 cut(s) 102, 503, 889
Tru1I TTAA 1 cut(s) 834
Tru9I TTAA 1 cut(s) 834
TscAI CASTG 2 cut(s) 559, 800
TseFI GTSAC 2 cut(s) 656, 692
TseI GCWGC 1 cut(s) 525
Tsp45I GTSAC 2 cut(s) 656, 692
TspDTI ATGAA 5 cut(s) 59, 180, 720, 725, 804
TspMI CCCGGG 1 cut(s) 839
TspRI CASTG 2 cut(s) 559, 800
VpaK11BI GGWCC 2 cut(s) 226, 259
XapI RAATTY 1 cut(s) 132
XceI RCATGY 2 cut(s) 217, 657
XmaI CCCGGG 1 cut(s) 839
XmnI GAANNNNTTC 2 cut(s) 307, 351
XspI CTAG 1 cut(s) 12
Zsp2I ATGCAT 1 cut(s) 219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.