pycom10g12600

Ferric-chelate reductase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
16062926 .. 16063599
674 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 354 bp
ATGGGGCATTTTAATGATAATTGGAGTGTTTTTTGTGGATTTGTCTTAAACAATAAGCTCAATGCTGATGTCTCCACCCACAAATCTCTTGGTATCTTCATTCTTGTGCTCGGTTGTCTTCAGGTCATGGCTCTTTTGATTCGACCGGAGAAGGAATCGAAGGTGCGAAAGTACTGGAATTGGTACCATCAAGGTGTGGGAAGGATTCTGATCATTTTTGCGGTAGCAAATGTTTTCTATGGAATCCATTTGGGAGAGAAAGGAAAGGGATGGAGTGCTGGCTATGGAGTTGTTATTGCTATCTTATTTGTTACTGCTTTAATTTTTGAATTAAGATTGTGGCTTAGAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

118

Amino Acids

13.34

Weight (kDa)

9.74

Isoelectric Point (pI)

28.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 183
AccB1I GGYRCC 1 cut(s) 183
AciI CCGC 1 cut(s) 221
AcuI CTGAAG 1 cut(s) 104
AfaI GTAC 2 cut(s) 173, 185
AgsI TTSAA 1 cut(s) 329
AluBI AGCT 1 cut(s) 58
AluI AGCT 1 cut(s) 58
Alw21I GWGCWC 1 cut(s) 111
Alw26I GTCTC 1 cut(s) 76
Asp718I GGTACC 1 cut(s) 183
BanI GGYRCC 1 cut(s) 183
BbsI GAAGAC 1 cut(s) 110
Bbv12I GWGCWC 1 cut(s) 111
BccI CCATC 2 cut(s) 195, 264
BclI TGATCA 1 cut(s) 210
BcoDI GTCTC 1 cut(s) 76
BmcAI AGTACT 1 cut(s) 173
BmiI GGNNCC 1 cut(s) 185
BpiI GAAGAC 1 cut(s) 110
BsaBI GATNNNNATC 1 cut(s) 209
BsaWI WCCGGW 1 cut(s) 145
Bse1I ACTGG 1 cut(s) 179
Bse8I GATNNNNATC 1 cut(s) 209
BseGI GGATG 1 cut(s) 275
BseJI GATNNNNATC 1 cut(s) 209
BseNI ACTGG 1 cut(s) 179
Bsh1285I CGRYCG 1 cut(s) 146
BshNI GGYRCC 1 cut(s) 183
BsiEI CGRYCG 1 cut(s) 146
BsiHKAI GWGCWC 1 cut(s) 111
BsiSI CCGG 1 cut(s) 146
BsmAI GTCTC 1 cut(s) 76
Bsp1286I GDGCHC 1 cut(s) 111
Bsp143I GATC 1 cut(s) 210
BspACI CCGC 1 cut(s) 221
BspLI GGNNCC 1 cut(s) 185
BspT107I GGYRCC 1 cut(s) 183
BsrI ACTGG 1 cut(s) 179
BssMI GATC 1 cut(s) 210
BstC8I GCNNGC 1 cut(s) 280
BstDEI CTNAG 1 cut(s) 344
BstF5I GGATG 1 cut(s) 275
BstKTI GATC 1 cut(s) 213
BstMAI GTCTC 1 cut(s) 76
BstMBI GATC 1 cut(s) 210
BstMCI CGRYCG 1 cut(s) 146
BstV2I GAAGAC 1 cut(s) 110
BtsCI GGATG 1 cut(s) 275
Cac8I GCNNGC 1 cut(s) 280
Csp6I GTAC 2 cut(s) 172, 184
CviAII CATG 1 cut(s) 127
CviJI RGCY 4 cut(s) 58, 131, 282, 343
CviKI_1 RGCY 4 cut(s) 58, 131, 282, 343
CviQI GTAC 2 cut(s) 172, 184
DdeI CTNAG 1 cut(s) 344
DpnI GATC 1 cut(s) 212
DpnII GATC 1 cut(s) 210
Eco57I CTGAAG 1 cut(s) 104
FaeI CATG 1 cut(s) 130
FaiI YATR 3 cut(s) 128, 240, 285
FatI CATG 1 cut(s) 126
FbaI TGATCA 1 cut(s) 210
FokI GGATG 1 cut(s) 282
HapII CCGG 1 cut(s) 146
Hin1II CATG 1 cut(s) 130
HinfI GANTC 4 cut(s) 139, 155, 205, 243
HpaII CCGG 1 cut(s) 146
Hpy188I TCNGA 1 cut(s) 210
HpyAV CCTTC 3 cut(s) 145, 154, 195
HpyF3I CTNAG 1 cut(s) 344
Hsp92II CATG 1 cut(s) 130
KpnI GGTACC 1 cut(s) 187
Ksp22I TGATCA 1 cut(s) 210
Kzo9I GATC 1 cut(s) 210
LpnPI CCDG 4 cut(s) 107, 159, 160, 264
MaeIII GTNAC 1 cut(s) 310
MalI GATC 1 cut(s) 212
MboI GATC 1 cut(s) 210
MboII GAAGA 2 cut(s) 88, 110
MhlI GDGCHC 1 cut(s) 111
MluCI AATT 4 cut(s) 19, 178, 321, 329
MseI TTAA 4 cut(s) 12, 47, 320, 332
MslI CAYNNNNRTG 3 cut(s) 12, 104, 192
MspI CCGG 1 cut(s) 146
NdeII GATC 1 cut(s) 210
NlaIII CATG 1 cut(s) 130
NlaIV GGNNCC 1 cut(s) 185
PfeI GAWTC 4 cut(s) 139, 155, 205, 243
PspN4I GGNNCC 1 cut(s) 185
RsaI GTAC 2 cut(s) 173, 185
RsaNI GTAC 2 cut(s) 172, 184
RseI CAYNNNNRTG 3 cut(s) 12, 104, 192
SaqAI TTAA 4 cut(s) 12, 47, 320, 332
Sau3AI GATC 1 cut(s) 210
ScaI AGTACT 1 cut(s) 173
SduI GDGCHC 1 cut(s) 111
SetI ASST 4 cut(s) 60, 126, 165, 196
SgeI CNNG 9 cut(s) 101, 116, 122, 134, 139, 158, 187, 203, 291
SmiMI CAYNNNNRTG 3 cut(s) 12, 104, 192
Sse9I AATT 4 cut(s) 19, 178, 321, 329
SsiI CCGC 1 cut(s) 221
TaqI TCGA 2 cut(s) 142, 158
TasI AATT 4 cut(s) 19, 178, 321, 329
TatI WGTACW 1 cut(s) 171
TfiI GAWTC 4 cut(s) 139, 155, 205, 243
Tru1I TTAA 4 cut(s) 12, 47, 320, 332
Tru9I TTAA 4 cut(s) 12, 47, 320, 332
TspDTI ATGAA 1 cut(s) 88
XcmI CCANNNNNNNNNTGG 1 cut(s) 86
ZrmI AGTACT 1 cut(s) 173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.