Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0003193

Physical Location & Seq

Genomic Coordinates Reverse (-)

28551713 .. 28555381

Gene Structure 3669 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGACAATTTTCCGACGAGTGCTGACAGCTGCTCGGACATGGCGATCCGTCCCCGTCCGCAGAACCCCAAACCCTAATCCTCCGCGTGCTCTTTCACCTGACTTCGCTATTCCTCGCCTTCTCTGCCACCGGTCTTTTGAGCACCAATCTCTCGTGTTTCCAACTGTGTTGGCTGGTTTGATCGGACTTGGAGGCATAGAGGTGGCTTATGCAGATGCAGAGGAGGATATTTCCAAGCCCGCTTTGCCTGCTGACCCTCCTGCTAGTGGAAGTCATGTAGACCTGGAAGAAATTACCAAGAAACAACGACAGCAAATTCTAGACCTCCTCAGAAGTAAAGGAATTGGACGCGGTTTTTATCCCCCCTTTACCGTTGCTGTTAAGGGACAAAAGGTTTCCATCAAGTTCCAAATTCCTCCGGCGTGTGAAGCTTCACAGCTGATAGCAAATATTGCTTCTCATCTTGGAGTAAAGGTAGAAGAACGTGGTGGTGGTTTAGATATGTCACTACGTGCTTGGGACAGTGGAGCTGCTTGGCAACTCATGCTAACTCGCCCAGAAAAAAAGAAGGAAGCTGGAGGTGATGGAGGGGAATTAAAAGATGTGAGTAAGCATGAAGGAGATTTGCAAGTTCTCTTGTTCCACTCAGTAATTACCTCCTCAGATAGAGCTGAAATTGAATTTATGAAGGATGGGACCTTGAGTCCCAAAGAGCTGGATGCTCTGGTGTCTGCTTTGCTATTAGCAGGGACAAAGTTATGGCAAAATAGTACCATGGAAAGAAAACCGAGGGAAGATACCACGACACAAATGCCATCTGCAGATAAACTAATAGCTAGTCTTGAGTCCATGGGAGTGAGAATTTATGGAATTAATGAACCCAATGTTAGTTCCACAAGAAAAGAGATTTCATGGGACAATATTGCTGGATATGATCAGCAAAAACGAGATATAGAAGACACTATTCTGTTGGCTCTGCTTAGTCCTGAAACATATGATGATATTGCCCGTGGGACTCGTTGTAAATTTGAGTCAAATAGACCTCGAGCTGTACTCTTTGAAGGGCCACCAGGTACGGGGAAGACATCTTCTGCTCGTGTCATTGCTAATCAAGCGGGCATCCCATTGTTATACGTACCCCTTGAGGTTATCCTGTCCAAGTACTATGGTGAGAGTGAACGATTATTAGGAAAAGTCTTTTCACTTGCAAATCAGCTTCCAGATGGTGCTATCATTTTTCTGGATGAGATTGATTCTTTTGCTATTTCGCGTGATAGCGAAATGCATGAAGCCACACGGAGAGTCTTATCAGTTTTATTGCGACAGATTGATGGATTTGAACAAGATAAGAAAGTGGTTGTAATTGCTGCAACAAATAGAAAGCAAGATCTTGATCCGGCCTTGATTAGTCGGTTTGATTCAATTATCATGTTTGACCTACCTGATCAGCAAAATCGTAAGGAAATAGCCGCTCAGTATGCAAAGCACCTGAACGAAGCTGAATTAGAAGAATTAGCATCAGCAACCGAAGGAATGTCTGGAAGGGATATTAGAGATGTCTGTCAACAAGCTGAGCGGTCGTGGGCATCAAAGATAATCCGAGGACAAGTACCCAAAGATGGAGAACAAGGCCATCTTCCACCTCTGCATCATTACATCGATAGTGCTAGGAATCGACAGAAGGGTCTACTCAGTTCCGCACAGCAAACACCCCAAAATTCCGACTCCAGCACAGAGAAGCGCAGACTCGTAGTTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

AAA

Protein Analysis

587

Amino Acids

64.85

Weight (kDa)

6.2

Isoelectric Point (pI)

52.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	351 - 479	1.3e-36	ATPase family associated with various cellular activities (AAA)
AAA_5	PF07728	351 - 472	5.8e-06	AAA domain (dynein-related subfamily)
AAA_lid_3	PF17862	501 - 526	2.3e-06	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003193)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04180 AT4G04180
fragaria_vesca	FvH4_3g01380 FvH4_6g05890 FvH4_6g05890 FvH4_6g05890 FvH4_6g05890 FvH4_6g05890 FvH4_6g05890 FvH4_6g05890
malus_domestica	MD10G1327000.v1.1 MD10G1327200.v1.1
prunus_persica	Prupe.4G014800_v2.0.a1 Prupe.4G015000_v2.0.a1 Prupe.4G015000_v2.0.a1
pyrus_communis	pycom10g27670
rosa_chinensis	RchiOBHm_Chr5g0002011 RchiOBHm_Chr5g0002051
rosa_laevigata	RLG00000025404 RLG00000030988 RLG00000030992
rosa_multiflora	Rmu_sc0000378.1_g000019 Rmu_sc0012328.1_g000001 Rmu_sc0017901.1_g000001
rosa_roxburghii	Rroxscaffold_1G00074350 Rroxscaffold_6G00424700
rosa_rugosa	Rorug04G0394300
rosa_samantha	Rh3DG064500 Rh5AG015500 Rh5AG015700 Rh5AG015800 Rh5BG019100 Rh5CG016800 Rh5CG017100 Rh5DG017400
rosa_wichuraiana	Rw5G001520 Rw5G001540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1683
AccBSI	CCGCTC	2 cut(s)	1472, 1576
AccI	GTMKAC	2 cut(s)	279, 1687
AccII	CGCG	3 cut(s)	85, 351, 1270
AciI	CCGC	8 cut(s)	58, 83, 240, 351, 1115, 1470, 1576, 1698
AclWI	GGATC	2 cut(s)	39, 1388
AcsI	RAATTY	6 cut(s)	315, 411, 680, 861, 1025, 1717
AdeI	CACNNNGTG	1 cut(s)	512
AfaI	GTAC	6 cut(s)	772, 1053, 1075, 1137, 1163, 1611
AfiI	CCNNNNNNNGG	3 cut(s)	266, 1076, 1619
AgeI	ACCGGT	1 cut(s)	129
AgsI	TTSAA	4 cut(s)	680, 1061, 1340, 1422
AhdI	GACNNNNNGTC	1 cut(s)	702
AjnI	CCWGG	2 cut(s)	282, 1069
Alw21I	GWGCWC	2 cut(s)	91, 144
AlwI	GGATC	2 cut(s)	39, 1388
Ama87I	CYCGRG	1 cut(s)	1044
AoxI	GGCC	3 cut(s)	1064, 1398, 1630
ApeKI	GCWGC	3 cut(s)	29, 530, 1367
ApoI	RAATTY	6 cut(s)	315, 411, 680, 861, 1025, 1717
AseI	ATTAAT	1 cut(s)	873
AsiGI	ACCGGT	1 cut(s)	129
AspLEI	GCGC	1 cut(s)	1743
AspS9I	GGNCC	2 cut(s)	696, 1064
AsuHPI	GGTGA	3 cut(s)	87, 593, 1181
AvaI	CYCGRG	1 cut(s)	1044
AvaII	GGWCC	1 cut(s)	696
BauI	CACGAG	2 cut(s)	152, 1095
BbsI	GAAGAC	2 cut(s)	963, 1088
Bbv12I	GWGCWC	2 cut(s)	91, 144
BbvI	GCAGC	3 cut(s)	16, 517, 1354
BccI	CCATC	8 cut(s)	407, 578, 686, 823, 1217, 1325, 1613, 1641
BcgI	CGANNNNNNTGC	2 cut(s)	793, 827
BciT130I	CCWGG	2 cut(s)	284, 1071
BclI	TGATCA	2 cut(s)	934, 1444
BfaI	CTAG	4 cut(s)	264, 320, 837, 1668
BfmI	CTRYAG	1 cut(s)	819
BglII	AGATCT	1 cut(s)	1387
BisI	GCNGC	4 cut(s)	30, 531, 1368, 1470
BlpI	GCTNAGC	1 cut(s)	1572
BlsI	GCNGC	4 cut(s)	31, 532, 1369, 1471
BmcAI	AGTACT	1 cut(s)	1163
Bme1390I	CCNGG	2 cut(s)	284, 1071
Bme18I	GGWCC	1 cut(s)	696
BmeRI	GACNNNNNGTC	1 cut(s)	702
BmeT110I	CYCGRG	1 cut(s)	1044
BmgT120I	GGNCC	2 cut(s)	696, 1064
BmiI	GGNNCC	1 cut(s)	697
BmrFI	CCNGG	2 cut(s)	284, 1071
BmsI	GCATC	6 cut(s)	205, 709, 1128, 1526, 1595, 1657
BpiI	GAAGAC	2 cut(s)	963, 1088
BplI	GAGNNNNNCTC	2 cut(s)	1038, 1070
BpmI	CTGGAG	2 cut(s)	597, 1711
Bpu1102I	GCTNAGC	1 cut(s)	1572
BpuEI	CTTGAG	3 cut(s)	721, 863, 1163
Bsa29I	ATCGAT	1 cut(s)	1659
BsaAI	YACGTR	2 cut(s)	512, 1135
BsaBI	GATNNNNATC	1 cut(s)	1392
BsaJI	CCNNGG	5 cut(s)	774, 788, 849, 1009, 1600
BsaWI	WCCGGW	1 cut(s)	129
BsaXI	ACNNNNNCTCC	2 cut(s)	459, 489
Bsc4I	CCNNNNNNNGG	3 cut(s)	266, 1076, 1619
Bse118I	RCCGGY	1 cut(s)	129
Bse3DI	GCAATG	1 cut(s)	1101
Bse8I	GATNNNNATC	1 cut(s)	1392
BseBI	CCWGG	2 cut(s)	284, 1071
BseCI	ATCGAT	1 cut(s)	1659
BseDI	CCNNGG	5 cut(s)	774, 788, 849, 1009, 1600
BseGI	GGATG	4 cut(s)	697, 724, 1119, 1249
BseJI	GATNNNNATC	1 cut(s)	1392
BseLI	CCNNNNNNNGG	3 cut(s)	266, 1076, 1619
BseMI	GCAATG	1 cut(s)	1101
BseMII	CTCAG	6 cut(s)	343, 660, 675, 1487, 1563, 1705
BseRI	GAGGAG	3 cut(s)	236, 317, 649
BseXI	GCAGC	3 cut(s)	16, 517, 1354
Bsh1236I	CGCG	3 cut(s)	85, 351, 1270
Bsh1285I	CGRYCG	1 cut(s)	1580
BshFI	GGCC	3 cut(s)	1066, 1400, 1632
BshTI	ACCGGT	1 cut(s)	129
BshVI	ATCGAT	1 cut(s)	1659
BsiEI	CGRYCG	1 cut(s)	1580
BsiHKAI	GWGCWC	2 cut(s)	91, 144
BsiHKCI	CYCGRG	1 cut(s)	1044
BsiSI	CCGG	3 cut(s)	130, 419, 1397
BslFI	GGGAC	8 cut(s)	35, 399, 533, 690, 709, 763, 929, 1027
BslI	CCNNNNNNNGG	3 cut(s)	266, 1076, 1619
BsmFI	GGGAC	8 cut(s)	35, 399, 533, 690, 709, 763, 929, 1027
BsnI	GGCC	3 cut(s)	1066, 1400, 1632
BsoBI	CYCGRG	1 cut(s)	1044
Bsp1286I	GDGCHC	2 cut(s)	91, 144
Bsp143I	GATC	6 cut(s)	44, 180, 934, 1387, 1393, 1444
Bsp1720I	GCTNAGC	1 cut(s)	1572
Bsp19I	CCATGG	2 cut(s)	774, 849
BspACI	CCGC	8 cut(s)	58, 83, 240, 351, 1115, 1470, 1576, 1698
BspANI	GGCC	3 cut(s)	1066, 1400, 1632
BspCNI	CTCAG	6 cut(s)	342, 659, 674, 1486, 1564, 1704
BspDI	ATCGAT	1 cut(s)	1659
BspFNI	CGCG	3 cut(s)	85, 351, 1270
BspLI	GGNNCC	1 cut(s)	697
BspMAI	CTGCAG	1 cut(s)	823
BspPI	GGATC	2 cut(s)	39, 1388
BsrBI	CCGCTC	2 cut(s)	1472, 1576
BsrDI	GCAATG	1 cut(s)	1101
BsrFI	RCCGGY	1 cut(s)	129
BssAI	RCCGGY	1 cut(s)	129
BssECI	CCNNGG	5 cut(s)	774, 788, 849, 1009, 1600
BssMI	GATC	6 cut(s)	44, 180, 934, 1387, 1393, 1444
BssSI	CACGAG	2 cut(s)	152, 1095
BssT1I	CCWWGG	2 cut(s)	774, 849
Bst2BI	CACGAG	2 cut(s)	152, 1095
Bst2UI	CCWGG	2 cut(s)	284, 1071
Bst4CI	ACNGT	3 cut(s)	166, 373, 524
BstAPI	GCANNNNNTGC	2 cut(s)	452, 544
BstBAI	YACGTR	2 cut(s)	512, 1135
BstC8I	GCNNGC	4 cut(s)	87, 240, 249, 1117
BstDEI	CTNAG	7 cut(s)	329, 646, 661, 980, 1473, 1572, 1691
BstDSI	CCRYGG	3 cut(s)	774, 849, 1009
BstF5I	GGATG	4 cut(s)	697, 724, 1119, 1249
BstFNI	CGCG	3 cut(s)	85, 351, 1270
BstHHI	GCGC	1 cut(s)	1743
BstKTI	GATC	6 cut(s)	47, 183, 937, 1390, 1396, 1447
BstMBI	GATC	6 cut(s)	44, 180, 934, 1387, 1393, 1444
BstMCI	CGRYCG	1 cut(s)	1580
BstMWI	GCNNNNNNNGC	8 cut(s)	123, 244, 248, 428, 452, 544, 1112, 1478
BstNI	CCWGG	2 cut(s)	284, 1071
BstSCI	CCNGG	2 cut(s)	282, 1069
BstSFI	CTRYAG	1 cut(s)	819
BstSNI	TACGTA	1 cut(s)	1135
BstUI	CGCG	3 cut(s)	85, 351, 1270
BstV1I	GCAGC	3 cut(s)	16, 517, 1354
BstV2I	GAAGAC	2 cut(s)	963, 1088
BstX2I	RGATCY	1 cut(s)	1387
BstXI	CCANNNNNNTGG	1 cut(s)	715
BstYI	RGATCY	1 cut(s)	1387
Bsu15I	ATCGAT	1 cut(s)	1659
BsuRI	GGCC	3 cut(s)	1066, 1400, 1632
BsuTUI	ATCGAT	1 cut(s)	1659
BtgI	CCRYGG	3 cut(s)	774, 849, 1009
BtsCI	GGATG	4 cut(s)	697, 724, 1119, 1249
BtsIMutI	CAGTG	1 cut(s)	529
Cac8I	GCNNGC	4 cut(s)	87, 240, 249, 1117
CfoI	GCGC	1 cut(s)	1743
Cfr10I	RCCGGY	1 cut(s)	129
Cfr13I	GGNCC	2 cut(s)	696, 1064
ClaI	ATCGAT	1 cut(s)	1659
CseI	GACGC	1 cut(s)	357
CsiI	ACCWGGT	1 cut(s)	1069
Csp6I	GTAC	6 cut(s)	771, 1052, 1074, 1136, 1162, 1610
CspAI	ACCGGT	1 cut(s)	129
CviAII	CATG	9 cut(s)	39, 275, 544, 614, 775, 850, 912, 1286, 1429
CviQI	GTAC	6 cut(s)	771, 1052, 1074, 1136, 1162, 1610
DdeI	CTNAG	7 cut(s)	329, 646, 661, 980, 1473, 1572, 1691
DpnI	GATC	6 cut(s)	46, 182, 936, 1389, 1395, 1446
DpnII	GATC	6 cut(s)	44, 180, 934, 1387, 1393, 1444
DraIII	CACNNNGTG	1 cut(s)	512
DrdI	GACNNNNNNGTC	1 cut(s)	1683
DriI	GACNNNNNGTC	1 cut(s)	702
DseDI	GACNNNNNNGTC	1 cut(s)	1683
Eam1105I	GACNNNNNGTC	1 cut(s)	702
Eco105I	TACGTA	1 cut(s)	1135
Eco130I	CCWWGG	2 cut(s)	774, 849
Eco47I	GGWCC	1 cut(s)	696
Eco88I	CYCGRG	1 cut(s)	1044
EcoO109I	RGGNCCY	1 cut(s)	696
EcoRII	CCWGG	2 cut(s)	282, 1069
EcoT14I	CCWWGG	2 cut(s)	774, 849
EcoT22I	ATGCAT	1 cut(s)	1287
ErhI	CCWWGG	2 cut(s)	774, 849
FaeI	CATG	9 cut(s)	42, 278, 547, 617, 778, 853, 915, 1289, 1432
FalI	AAGNNNNNCTT	2 cut(s)	1620, 1652
FaqI	GGGAC	8 cut(s)	35, 399, 533, 690, 709, 763, 929, 1027
FatI	CATG	9 cut(s)	38, 274, 543, 613, 774, 849, 911, 1285, 1428
FauI	CCCGC	2 cut(s)	247, 1108
FauNDI	CATATG	1 cut(s)	994
FbaI	TGATCA	2 cut(s)	934, 1444
FblI	GTMKAC	2 cut(s)	279, 1687
Fnu4HI	GCNGC	4 cut(s)	30, 531, 1368, 1470
FokI	GGATG	4 cut(s)	704, 731, 1106, 1256
Fsp4HI	GCNGC	4 cut(s)	30, 531, 1368, 1470
FspBI	CTAG	4 cut(s)	264, 320, 837, 1668
GlaI	GCGC	1 cut(s)	1742
GluI	GCNGC	4 cut(s)	30, 531, 1368, 1470
GsuI	CTGGAG	2 cut(s)	597, 1711
HaeIII	GGCC	3 cut(s)	1066, 1400, 1632
HapII	CCGG	3 cut(s)	130, 419, 1397
HgaI	GACGC	1 cut(s)	357
HhaI	GCGC	1 cut(s)	1743
Hin1II	CATG	9 cut(s)	42, 278, 547, 617, 778, 853, 915, 1289, 1432
Hin6I	GCGC	1 cut(s)	1741
HinP1I	GCGC	1 cut(s)	1741
HincII	GTYRAC	1 cut(s)	1565
HindII	GTYRAC	1 cut(s)	1565
HindIII	AAGCTT	1 cut(s)	429
HpaII	CCGG	3 cut(s)	130, 419, 1397
HphI	GGTGA	3 cut(s)	87, 593, 1181
Hpy166II	GTNNAC	4 cut(s)	280, 1178, 1565, 1688
Hpy188I	TCNGA	7 cut(s)	14, 36, 185, 332, 664, 1601, 1723
Hpy188III	TCNNGA	7 cut(s)	320, 842, 986, 1220, 1241, 1391, 1539
Hpy8I	GTNNAC	4 cut(s)	280, 1178, 1565, 1688
Hpy99I	CGWCG	1 cut(s)	18
HpyAV	CCTTC	8 cut(s)	128, 562, 611, 682, 1055, 1523, 1536, 1675
HpyCH4III	ACNGT	3 cut(s)	166, 373, 524
HpyCH4IV	ACGT	3 cut(s)	484, 511, 1134
HpyCH4V	TGCA	9 cut(s)	212, 218, 628, 821, 1208, 1285, 1370, 1481, 1648
HpyF10VI	GCNNNNNNNGC	8 cut(s)	123, 244, 248, 428, 452, 544, 1112, 1478
HpyF3I	CTNAG	7 cut(s)	329, 646, 661, 980, 1473, 1572, 1691
HpySE526I	ACGT	3 cut(s)	484, 511, 1134
Hsp92II	CATG	9 cut(s)	42, 278, 547, 617, 778, 853, 915, 1289, 1432
HspAI	GCGC	1 cut(s)	1741
Ksp22I	TGATCA	2 cut(s)	934, 1444
Kzo9I	GATC	6 cut(s)	44, 180, 934, 1387, 1393, 1444
LmnI	GCTCC	1 cut(s)	527
Lsp1109I	GCAGC	3 cut(s)	16, 517, 1354
LweI	GCATC	6 cut(s)	205, 709, 1128, 1526, 1595, 1657
MabI	ACCWGGT	1 cut(s)	1069
MaeI	CTAG	4 cut(s)	264, 320, 837, 1668
MaeII	ACGT	3 cut(s)	484, 511, 1134
MaeIII	GTNAC	1 cut(s)	504
MalI	GATC	6 cut(s)	46, 182, 936, 1389, 1395, 1446
MbiI	CCGCTC	2 cut(s)	1472, 1576
MboI	GATC	6 cut(s)	44, 180, 934, 1387, 1393, 1444
MboII	GAAGA	8 cut(s)	299, 491, 806, 968, 1080, 1093, 1520, 1628
MflI	RGATCY	1 cut(s)	1387
MhlI	GDGCHC	2 cut(s)	91, 144
MlyI	GAGTC	7 cut(s)	712, 854, 1009, 1040, 1311, 1718, 1740
MmeI	TCCRAC	3 cut(s)	37, 185, 1746
Mph1103I	ATGCAT	1 cut(s)	1287
MseI	TTAA	4 cut(s)	381, 596, 873, 1759
MslI	CAYNNNNRTG	2 cut(s)	200, 854
MspA1I	CMGCKG	2 cut(s)	29, 439
MspI	CCGG	3 cut(s)	130, 419, 1397
MspR9I	CCNGG	2 cut(s)	284, 1071
MvaI	CCWGG	2 cut(s)	284, 1071
MvnI	CGCG	3 cut(s)	85, 351, 1270
MwoI	GCNNNNNNNGC	8 cut(s)	123, 244, 248, 428, 452, 544, 1112, 1478
NcoI	CCATGG	2 cut(s)	774, 849
NdeI	CATATG	1 cut(s)	994
NdeII	GATC	6 cut(s)	44, 180, 934, 1387, 1393, 1444
NlaIII	CATG	9 cut(s)	42, 278, 547, 617, 778, 853, 915, 1289, 1432
NlaIV	GGNNCC	1 cut(s)	697
NmuCI	GTSAC	1 cut(s)	504
NsiI	ATGCAT	1 cut(s)	1287
PaeR7I	CTCGAG	1 cut(s)	1044
PcsI	WCGNNNNNNNCGW	1 cut(s)	40
PfeI	GAWTC	3 cut(s)	1253, 1418, 1672
PinAI	ACCGGT	1 cut(s)	129
PkrI	GCNGC	4 cut(s)	31, 532, 1369, 1471
PleI	GAGTC	7 cut(s)	711, 853, 1009, 1039, 1310, 1718, 1740
PpsI	GAGTC	7 cut(s)	711, 853, 1009, 1039, 1310, 1718, 1740
Ppu21I	YACGTR	2 cut(s)	512, 1135
PpuMI	RGGWCCY	1 cut(s)	696
PshBI	ATTAAT	1 cut(s)	873
Psp5II	RGGWCCY	1 cut(s)	696
Psp6I	CCWGG	2 cut(s)	282, 1069
PspGI	CCWGG	2 cut(s)	282, 1069
PspN4I	GGNNCC	1 cut(s)	697
PspPI	GGNCC	2 cut(s)	696, 1064
PspPPI	RGGWCCY	1 cut(s)	696
PspXI	VCTCGAGB	1 cut(s)	1044
PstI	CTGCAG	1 cut(s)	823
PsuI	RGATCY	1 cut(s)	1387
PvuII	CAGCTG	2 cut(s)	29, 439
RsaI	GTAC	6 cut(s)	772, 1053, 1075, 1137, 1163, 1611
RsaNI	GTAC	6 cut(s)	771, 1052, 1074, 1136, 1162, 1610
RseI	CAYNNNNRTG	2 cut(s)	200, 854
SaqAI	TTAA	4 cut(s)	381, 596, 873, 1759
SatI	GCNGC	4 cut(s)	30, 531, 1368, 1470
Sau3AI	GATC	6 cut(s)	44, 180, 934, 1387, 1393, 1444
Sau96I	GGNCC	2 cut(s)	696, 1064
ScaI	AGTACT	1 cut(s)	1163
SchI	GAGTC	7 cut(s)	712, 854, 1009, 1040, 1311, 1718, 1740
ScrFI	CCNGG	2 cut(s)	284, 1071
SduI	GDGCHC	2 cut(s)	91, 144
SexAI	ACCWGGT	1 cut(s)	1069
SfaNI	GCATC	6 cut(s)	205, 709, 1128, 1526, 1595, 1657
SfcI	CTRYAG	1 cut(s)	819
Sfr274I	CTCGAG	1 cut(s)	1044
SinI	GGWCC	1 cut(s)	696
SlaI	CTCGAG	1 cut(s)	1044
SmiMI	CAYNNNNRTG	2 cut(s)	200, 854
SmlI	CTYRAG	4 cut(s)	700, 842, 1044, 1142
SmoI	CTYRAG	4 cut(s)	700, 842, 1044, 1142
SnaBI	TACGTA	1 cut(s)	1135
SsiI	CCGC	8 cut(s)	58, 83, 240, 351, 1115, 1470, 1576, 1698
SspI	AATATT	2 cut(s)	451, 922
SspMI	CTAG	4 cut(s)	264, 320, 837, 1668
StyD4I	CCNGG	2 cut(s)	282, 1069
StyI	CCWWGG	2 cut(s)	774, 849
TaaI	ACNGT	3 cut(s)	166, 373, 524
TaiI	ACGT	3 cut(s)	487, 514, 1137
TaqI	TCGA	3 cut(s)	1045, 1659, 1675
TatI	WGTACW	2 cut(s)	1051, 1161
TauI	GCSGC	1 cut(s)	1472
TfiI	GAWTC	3 cut(s)	1253, 1418, 1672
Tru1I	TTAA	4 cut(s)	381, 596, 873, 1759
Tru9I	TTAA	4 cut(s)	381, 596, 873, 1759
TscAI	CASTG	1 cut(s)	529
TseFI	GTSAC	1 cut(s)	504
TseI	GCWGC	3 cut(s)	29, 530, 1367
Tsp45I	GTSAC	1 cut(s)	504
TspDTI	ATGAA	5 cut(s)	630, 701, 891, 900, 1302
TspGWI	ACGGA	2 cut(s)	37, 1312
TspRI	CASTG	1 cut(s)	529
VpaK11BI	GGWCC	1 cut(s)	696
VspI	ATTAAT	1 cut(s)	873
XapI	RAATTY	6 cut(s)	315, 411, 680, 861, 1025, 1717
XbaI	TCTAGA	1 cut(s)	319
XhoI	CTCGAG	1 cut(s)	1044
XmiI	GTMKAC	2 cut(s)	279, 1687
XspI	CTAG	4 cut(s)	264, 320, 837, 1668
ZrmI	AGTACT	1 cut(s)	1163
Zsp2I	ATGCAT	1 cut(s)	1287

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.