Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0002215

Physical Location & Seq

Genomic Coordinates Forward (+)

5381316 .. 5382827

Gene Structure 1512 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

ATGGCGGGAAAGGCTTCGAATTTCTCGGATCTGATTCAGCGAGTGGCGGCTTCTTGCTTGCTCCATCCACTCGCCGCCGGCCGCTACGATTCCTGTGATTCACCTGTGAATCGACGCGCCGGCGATGAGGAGGACGAAATGTACGAGCACGAAGCCGGCGACAAGCACGACGGAAAGGAGGAAGACGAAGACGATGAAGTGATTGACGGGGGAGGTTTAGGGGTAACGGTTGGGGAGGATCGGGGGTCGACGAAGGCGAAGGAGGTGGTGGAGATGGAGATGGCAATGAGGGAGGTGTTCGACGCCGTTGCAGCGATGAAGAAGGCGTACGTCAGCCTCCAAGAGGCCCACATCCCGTGGGACCCGGAGAAGCTCAGGGCAGCTGACGCGGCGGTGGTCGGTGAGCTGAGAAAAATTGGGGTACTGAGAGAGAGGTTCCGAAGAAGGCGTTGTAGCGGCGGCGGAGAGCGAGTAATGGCGGGGAGTATGTTGAGAGAGGTGGTGGCTCCGTACGAAGCGGCAGTGGACGAGCTGAAGAGAGAGGTGAAGTCCAGAGAGGTCGAGATCCAGAACCTCAAGGAGAAGCTAAACGGCGCCGTTAACGGGTCCCACTCGAAGAAGGGCAGGTCCGTGTCCAGAAGAAAAGTCGGCTGCATCACTCTAGCCGAAGTTGCAGTATCTCCGGCGCCGGAGCTGTTCGAGGCGACGATGCGCCAAGTGAGAGAGGCATCCAAGTCGTTCACGTCGCTGCTCCTCTCCCTCATGCGCGCGGCCCACTGGGACATCGCCGCCGCTGTGCGATCAATCGAAGCCGCCACCGCCACCACCGGCGGGATCAACACGACGTCATCGGTCATCGCAACGCAGAACGGCAACGCCAAGTACGCGCTGCAGTCCTACATTTCGCGGAAGCTCTTCCAGGGCTTCGATCACGAGACGTTCTACATGGACGGCAGCCTCTCGTCGCTGCTCAACCCGGACCAGCACCGCCGCGACTGCTTCGCCCGGTACCGCGACTTCAAGGCCATGGACCCCACCGAGCTGCTCGGGATCCTGCCCACGTGTCAGTTCGGGAAGTTCTGCTCCACCAAGTACCTGGCCGTCGTCCATCCCAAGATGGAGGAGTCGTTGTTCGGGGACTTGGAGCAGAGACGACATGTCGTAGAAGGGGGGCACCCGAGGAGCGAGTTTTACGGGGAGTTTCTGGGTCTGGCGAAGGCGGTGTGGCTGCTGCACTTGCTGGCGTTTTCGCTCGACCCGCCGCCGAGTCAGTTCGAGGCGAGTCGAGGGGCGGAGTTTCATCCGGGTTATATGGAGAGTGTTGTGACGTTTGCGGGCGGGCGGGTTTCGGCGGGTCAGGTTGTCGGGTTTCCGGTGTGTCCCGGGTTTAAGCTTGGGAATGGATCAGTTATTAAGGCTAGGGTTTATCTGATAAATAGGAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009639 GO:0009959 GO:0050896

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF641

Protein Analysis

482

Amino Acids

52.87

Weight (kDa)

6.39

Isoelectric Point (pI)

44.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF641	PF04859	89 - 204	6e-34	Plant protein of unknown function (DUF641)
GIL1_IRKI_C	PF24994	425 - 476	6.6e-11	GIL1/IRKI C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002215)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58960 AT5G58960 AT5G58960
fragaria_vesca	FvH4_3g37820 FvH4_3g37850
malus_domestica	MD03G1078100.v1.1 MD11G1082800.v1.1
prunus_persica	Prupe.6G063100_v2.0.a1
pyrus_communis	pycom03g06240 pycom11g07090
rosa_chinensis	RchiOBHm_Chr5g0068001 RchiOBHm_Chr5g0068051 RchiOBHm_Chr5g0068071
rosa_laevigata	RLG00000035951 RLG00000035952
rosa_multiflora	Rmu_co8216896.1_g000001 Rmu_co8424771.1_g000001 Rmu_sc0000435.1_g000019 Rmu_sc0000435.1_g000025 Rmu_sc0000435.1_g000034
rosa_roxburghii	Rroxscaffold_1G00012550 Rroxscaffold_1G00012560 Rroxscaffold_1G00013280 Rroxscaffold_1G00013290
rosa_rugosa	Rorug05G0387200 Rorug05G0387600 Rorug05G0388100
rosa_samantha	Rh5AG446100 Rh5AG446300 Rh5AG446400 Rh5BG463600 Rh5BG464000 Rh5BG464300 Rh5CG485500 Rh5CG486000 Rh5CG486300 Rh5DG477600 Rh5DG478000 Rh5DG478300
rosa_wichuraiana	Rw5G041670 Rw5G041680 Rw5G041710 Rw5G041720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	848
Acc36I	ACCTGC	1 cut(s)	615
Acc65I	GGTACC	1 cut(s)	1008
AccB1I	GGYRCC	4 cut(s)	593, 685, 1008, 1173
AccI	GTMKAC	1 cut(s)	248
AccII	CGCG	8 cut(s)	117, 389, 768, 770, 887, 907, 993, 1014
AclWI	GGATC	7 cut(s)	36, 246, 559, 842, 1045, 1058, 1411
AcoI	YGGCCR	2 cut(s)	79, 1098
AcsI	RAATTY	1 cut(s)	19
AcuI	CTGAAG	1 cut(s)	554
AcvI	CACGTG	1 cut(s)	1062
AcyI	GRCGYC	4 cut(s)	303, 594, 686, 845
AfaI	GTAC	7 cut(s)	143, 329, 423, 512, 884, 1010, 1094
AfiI	CCNNNNNNNGG	3 cut(s)	343, 603, 831
AflIII	ACRYGT	2 cut(s)	1061, 1156
AgsI	TTSAA	1 cut(s)	1021
AhdI	GACNNNNNGTC	1 cut(s)	1157
AjiI	CACGTC	1 cut(s)	744
AjnI	CCWGG	2 cut(s)	918, 1095
AloI	GAACNNNNNNTCC	2 cut(s)	1115, 1147
AluBI	AGCT	9 cut(s)	373, 383, 406, 532, 586, 694, 913, 1042, 1393
AluI	AGCT	9 cut(s)	373, 383, 406, 532, 586, 694, 913, 1042, 1393
Alw21I	GWGCWC	1 cut(s)	150
Alw26I	GTCTC	2 cut(s)	929, 1144
AlwI	GGATC	7 cut(s)	36, 246, 559, 842, 1045, 1058, 1411
Ama87I	CYCGRG	3 cut(s)	1046, 1177, 1382
AoxI	GGCC	5 cut(s)	79, 345, 771, 1023, 1098
ApoI	RAATTY	1 cut(s)	19
Asp700I	GAANNNNTTC	2 cut(s)	13, 914
Asp718I	GGTACC	1 cut(s)	1008
AspLEI	GCGC	7 cut(s)	119, 596, 688, 714, 768, 770, 889
AspS9I	GGNCC	7 cut(s)	346, 361, 606, 627, 772, 979, 1030
AsuC2I	CCSGG	6 cut(s)	365, 977, 1006, 1305, 1383, 1384
AsuHPI	GGTGA	3 cut(s)	93, 413, 556
AsuII	TTCGAA	1 cut(s)	17
AvaI	CYCGRG	3 cut(s)	1046, 1177, 1382
AvaII	GGWCC	5 cut(s)	361, 606, 627, 979, 1030
BaeGI	GKGCMC	1 cut(s)	1176
BamHI	GGATCC	1 cut(s)	1050
BanI	GGYRCC	4 cut(s)	593, 685, 1008, 1173
BarI	GAAGNNNNNNTAC	4 cut(s)	311, 343, 1001, 1033
BauI	CACGAG	1 cut(s)	932
BbrPI	CACGTG	1 cut(s)	1062
BbsI	GAAGAC	2 cut(s)	189, 195
Bbv12I	GWGCWC	1 cut(s)	150
BccI	CCATC	5 cut(s)	72, 268, 274, 1111, 1116
BceAI	ACGGC	6 cut(s)	290, 581, 607, 886, 967, 1085
BcgI	CGANNNNNNTGC	4 cut(s)	290, 324, 717, 751
BciT130I	CCWGG	2 cut(s)	920, 1097
BcnI	CCSGG	6 cut(s)	365, 977, 1006, 1305, 1383, 1384
BcoDI	GTCTC	2 cut(s)	929, 1144
BfaI	CTAG	2 cut(s)	662, 1419
BfmI	CTRYAG	1 cut(s)	890
BfoI	RGCGCY	2 cut(s)	597, 689
BfuAI	ACCTGC	1 cut(s)	615
Bme1390I	CCNGG	8 cut(s)	365, 920, 977, 1006, 1097, 1305, 1383, 1384
Bme18I	GGWCC	5 cut(s)	361, 606, 627, 979, 1030
BmeRI	GACNNNNNGTC	1 cut(s)	1157
BmeT110I	CYCGRG	3 cut(s)	1046, 1177, 1382
BmgBI	CACGTC	1 cut(s)	744
BmgT120I	GGNCC	7 cut(s)	346, 361, 606, 627, 772, 979, 1030
BmrFI	CCNGG	8 cut(s)	365, 920, 977, 1006, 1097, 1305, 1383, 1384
BmrI	ACTGGG	1 cut(s)	787
BmsI	GCATC	3 cut(s)	663, 699, 737
BmuI	ACTGGG	1 cut(s)	787
BpiI	GAAGAC	2 cut(s)	189, 195
Bpu10I	CCTNAGC	1 cut(s)	374
Bpu14I	TTCGAA	1 cut(s)	17
BpuEI	CTTGAG	1 cut(s)	560
BpuMI	CCSGG	6 cut(s)	365, 977, 1006, 1305, 1383, 1384
BsaAI	YACGTR	1 cut(s)	1062
BsaHI	GRCGYC	4 cut(s)	303, 594, 686, 845
BsaJI	CCNNGG	5 cut(s)	356, 919, 1026, 1178, 1382
BsaWI	WCCGGW	1 cut(s)	1372
BsaXI	ACNNNNNCTCC	6 cut(s)	456, 486, 1112, 1115, 1142, 1145
Bsc4I	CCNNNNNNNGG	3 cut(s)	343, 603, 831
Bse118I	RCCGGY	4 cut(s)	77, 119, 155, 827
Bse1I	ACTGG	1 cut(s)	782
Bse3DI	GCAATG	1 cut(s)	291
BseBI	CCWGG	2 cut(s)	920, 1097
BseDI	CCNNGG	5 cut(s)	356, 919, 1026, 1178, 1382
BseGI	GGATG	5 cut(s)	64, 351, 728, 1108, 1300
BseLI	CCNNNNNNNGG	3 cut(s)	343, 603, 831
BseMI	GCAATG	1 cut(s)	291
BseMII	CTCAG	3 cut(s)	388, 398, 416
BseNI	ACTGG	1 cut(s)	782
BsePI	GCGCGC	1 cut(s)	766
BseRI	GAGGAG	4 cut(s)	143, 743, 1136, 1195
BseSI	GKGCMC	1 cut(s)	1176
BseX3I	CGGCCG	1 cut(s)	79
BsgI	GTGCAG	1 cut(s)	1217
Bsh1236I	CGCG	8 cut(s)	117, 389, 768, 770, 887, 907, 993, 1014
Bsh1285I	CGRYCG	1 cut(s)	82
BshFI	GGCC	5 cut(s)	81, 347, 773, 1025, 1100
BshNI	GGYRCC	4 cut(s)	593, 685, 1008, 1173
BsiEI	CGRYCG	1 cut(s)	82
BsiHKAI	GWGCWC	1 cut(s)	150
BsiHKCI	CYCGRG	3 cut(s)	1046, 1177, 1382
BsiWI	CGTACG	2 cut(s)	327, 510
BslFI	GGGAC	5 cut(s)	374, 592, 794, 1151, 1365
BslI	CCNNNNNNNGG	3 cut(s)	343, 603, 831
BsmAI	GTCTC	2 cut(s)	929, 1144
BsmBI	CGTCTC	2 cut(s)	929, 1144
BsmFI	GGGAC	5 cut(s)	374, 592, 794, 1151, 1365
BsnI	GGCC	5 cut(s)	81, 347, 773, 1025, 1100
BsoBI	CYCGRG	3 cut(s)	1046, 1177, 1382
Bsp119I	TTCGAA	1 cut(s)	17
Bsp1286I	GDGCHC	2 cut(s)	150, 1176
Bsp143I	GATC	8 cut(s)	28, 238, 564, 800, 834, 928, 1050, 1403
Bsp19I	CCATGG	1 cut(s)	1026
BspANI	GGCC	5 cut(s)	81, 347, 773, 1025, 1100
BspCNI	CTCAG	3 cut(s)	387, 399, 417
BspFNI	CGCG	8 cut(s)	117, 389, 768, 770, 887, 907, 993, 1014
BspMAI	CTGCAG	1 cut(s)	894
BspMI	ACCTGC	1 cut(s)	615
BspPI	GGATC	7 cut(s)	36, 246, 559, 842, 1045, 1058, 1411
BspQI	GCTCTTC	1 cut(s)	920
BspT104I	TTCGAA	1 cut(s)	17
BspT107I	GGYRCC	4 cut(s)	593, 685, 1008, 1173
BsrDI	GCAATG	1 cut(s)	291
BsrFI	RCCGGY	4 cut(s)	77, 119, 155, 827
BsrI	ACTGG	1 cut(s)	782
BssAI	RCCGGY	4 cut(s)	77, 119, 155, 827
BssECI	CCNNGG	5 cut(s)	356, 919, 1026, 1178, 1382
BssHII	GCGCGC	1 cut(s)	766
BssMI	GATC	8 cut(s)	28, 238, 564, 800, 834, 928, 1050, 1403
BssNI	GRCGYC	4 cut(s)	303, 594, 686, 845
BssSI	CACGAG	1 cut(s)	932
BssT1I	CCWWGG	1 cut(s)	1026
Bst2BI	CACGAG	1 cut(s)	932
Bst2UI	CCWGG	2 cut(s)	920, 1097
Bst4CI	ACNGT	1 cut(s)	229
Bst6I	CTCTTC	2 cut(s)	530, 920
BstACI	GRCGYC	4 cut(s)	303, 594, 686, 845
BstBAI	YACGTR	1 cut(s)	1062
BstBI	TTCGAA	1 cut(s)	17
BstC8I	GCNNGC	8 cut(s)	59, 79, 121, 157, 768, 1242, 1336, 1340
BstDEI	CTNAG	3 cut(s)	374, 407, 425
BstDSI	CCRYGG	2 cut(s)	356, 1026
BstENI	CCTNNNNNAGG	1 cut(s)	341
BstF5I	GGATG	5 cut(s)	64, 351, 728, 1108, 1300
BstFNI	CGCG	8 cut(s)	117, 389, 768, 770, 887, 907, 993, 1014
BstH2I	RGCGCY	2 cut(s)	597, 689
BstHHI	GCGC	7 cut(s)	119, 596, 688, 714, 768, 770, 889
BstKTI	GATC	8 cut(s)	31, 241, 567, 803, 837, 931, 1053, 1406
BstMAI	GTCTC	2 cut(s)	929, 1144
BstMBI	GATC	8 cut(s)	28, 238, 564, 800, 834, 928, 1050, 1403
BstMCI	CGRYCG	1 cut(s)	82
BstNI	CCWGG	2 cut(s)	920, 1097
BstNSI	RCATGY	1 cut(s)	1160
BstSCI	CCNGG	8 cut(s)	363, 918, 975, 1004, 1095, 1303, 1381, 1382
BstSFI	CTRYAG	1 cut(s)	890
BstSLI	GKGCMC	1 cut(s)	1176
BstUI	CGCG	8 cut(s)	117, 389, 768, 770, 887, 907, 993, 1014
BstV2I	GAAGAC	2 cut(s)	189, 195
BstX2I	RGATCY	3 cut(s)	28, 564, 1050
BstXI	CCANNNNNNTGG	1 cut(s)	1096
BstYI	RGATCY	3 cut(s)	28, 564, 1050
BstZI	CGGCCG	1 cut(s)	79
BsuRI	GGCC	5 cut(s)	81, 347, 773, 1025, 1100
BtgI	CCRYGG	2 cut(s)	356, 1026
BtgZI	GCGATG	4 cut(s)	138, 329, 769, 841
BtrI	CACGTC	1 cut(s)	744
BtsCI	GGATG	5 cut(s)	64, 351, 728, 1108, 1300
BtsI	GCAGTG	1 cut(s)	528
BtsIMutI	CAGTG	2 cut(s)	528, 775
BveI	ACCTGC	1 cut(s)	615
Cac8I	GCNNGC	8 cut(s)	59, 79, 121, 157, 768, 1242, 1336, 1340
CfoI	GCGC	7 cut(s)	119, 596, 688, 714, 768, 770, 889
Cfr10I	RCCGGY	4 cut(s)	77, 119, 155, 827
Cfr13I	GGNCC	7 cut(s)	346, 361, 606, 627, 772, 979, 1030
Cfr9I	CCCGGG	1 cut(s)	1382
CseI	GACGC	3 cut(s)	123, 311, 395
Csp6I	GTAC	7 cut(s)	142, 328, 422, 511, 883, 1009, 1093
CviAII	CATG	4 cut(s)	763, 946, 1027, 1157
CviQI	GTAC	7 cut(s)	142, 328, 422, 511, 883, 1009, 1093
DdeI	CTNAG	3 cut(s)	374, 407, 425
DinI	GGCGCC	2 cut(s)	595, 687
DpnI	GATC	8 cut(s)	30, 240, 566, 802, 836, 930, 1052, 1405
DpnII	GATC	8 cut(s)	28, 238, 564, 800, 834, 928, 1050, 1403
DriI	GACNNNNNGTC	1 cut(s)	1157
EaeI	YGGCCR	2 cut(s)	79, 1098
EagI	CGGCCG	1 cut(s)	79
Eam1104I	CTCTTC	2 cut(s)	530, 920
Eam1105I	GACNNNNNGTC	1 cut(s)	1157
EarI	CTCTTC	2 cut(s)	530, 920
EciI	GGCGGA	2 cut(s)	477, 1307
EclXI	CGGCCG	1 cut(s)	79
Eco130I	CCWWGG	1 cut(s)	1026
Eco47I	GGWCC	5 cut(s)	361, 606, 627, 979, 1030
Eco52I	CGGCCG	1 cut(s)	79
Eco57I	CTGAAG	1 cut(s)	554
Eco72I	CACGTG	1 cut(s)	1062
Eco88I	CYCGRG	3 cut(s)	1046, 1177, 1382
EcoNI	CCTNNNNNAGG	1 cut(s)	341
EcoO109I	RGGNCCY	2 cut(s)	361, 606
EcoRII	CCWGG	2 cut(s)	918, 1095
EcoT14I	CCWWGG	1 cut(s)	1026
EgeI	GGCGCC	2 cut(s)	595, 687
EheI	GGCGCC	2 cut(s)	595, 687
ErhI	CCWWGG	1 cut(s)	1026
Esp3I	CGTCTC	2 cut(s)	929, 1144
FaeI	CATG	4 cut(s)	766, 949, 1030, 1160
FaiI	YATR	7 cut(s)	488, 764, 947, 1028, 1158, 1311, 1313
FaqI	GGGAC	5 cut(s)	374, 592, 794, 1151, 1365
FatI	CATG	4 cut(s)	762, 945, 1026, 1156
FauI	CCCGC	7 cut(s)	472, 824, 1266, 1327, 1331, 1335, 1345
FblI	GTMKAC	1 cut(s)	248
FokI	GGATG	5 cut(s)	51, 338, 715, 1095, 1287
FspBI	CTAG	2 cut(s)	662, 1419
GlaI	GCGC	7 cut(s)	118, 595, 687, 713, 767, 769, 888
HaeII	RGCGCY	2 cut(s)	597, 689
HaeIII	GGCC	5 cut(s)	81, 347, 773, 1025, 1100
HgaI	GACGC	3 cut(s)	123, 311, 395
HhaI	GCGC	7 cut(s)	119, 596, 688, 714, 768, 770, 889
Hin1I	GRCGYC	4 cut(s)	303, 594, 686, 845
Hin1II	CATG	4 cut(s)	766, 949, 1030, 1160
Hin6I	GCGC	7 cut(s)	117, 594, 686, 712, 766, 768, 887
HinP1I	GCGC	7 cut(s)	117, 594, 686, 712, 766, 768, 887
HincII	GTYRAC	2 cut(s)	249, 601
HindII	GTYRAC	2 cut(s)	249, 601
HindIII	AAGCTT	1 cut(s)	1391
HinfI	GANTC	7 cut(s)	34, 89, 98, 109, 1124, 1267, 1282
HpaI	GTTAAC	1 cut(s)	601
HphI	GGTGA	3 cut(s)	93, 413, 556
Hpy166II	GTNNAC	4 cut(s)	249, 526, 601, 741
Hpy188I	TCNGA	4 cut(s)	28, 33, 440, 1431
Hpy188III	TCNNGA	7 cut(s)	552, 562, 568, 636, 932, 1048, 1072
Hpy8I	GTNNAC	4 cut(s)	249, 526, 601, 741
Hpy99I	CGWCG	9 cut(s)	117, 173, 253, 305, 709, 748, 847, 967, 1106
HpyAV	CCTTC	7 cut(s)	247, 253, 316, 438, 613, 1160, 1210
HpyCH4III	ACNGT	1 cut(s)	229
HpyCH4IV	ACGT	6 cut(s)	330, 743, 845, 938, 1061, 1328
HpyCH4V	TGCA	5 cut(s)	311, 654, 674, 892, 1234
HpyF3I	CTNAG	3 cut(s)	374, 407, 425
HpySE526I	ACGT	6 cut(s)	330, 743, 845, 938, 1061, 1328
Hsp92I	GRCGYC	4 cut(s)	303, 594, 686, 845
Hsp92II	CATG	4 cut(s)	766, 949, 1030, 1160
HspAI	GCGC	7 cut(s)	117, 594, 686, 712, 766, 768, 887
KasI	GGCGCC	2 cut(s)	593, 685
KflI	GGGWCCC	2 cut(s)	361, 606
KpnI	GGTACC	1 cut(s)	1012
KroI	GCCGGC	3 cut(s)	77, 119, 155
KroNI	GCCGGC	3 cut(s)	79, 121, 157
KspAI	GTTAAC	1 cut(s)	601
Kzo9I	GATC	8 cut(s)	28, 238, 564, 800, 834, 928, 1050, 1403
LguI	GCTCTTC	1 cut(s)	920
LmnI	GCTCC	7 cut(s)	66, 511, 691, 756, 1088, 1144, 1182
LweI	GCATC	3 cut(s)	663, 699, 737
MaeI	CTAG	2 cut(s)	662, 1419
MaeII	ACGT	6 cut(s)	330, 743, 845, 938, 1061, 1328
MaeIII	GTNAC	2 cut(s)	223, 1324
MalI	GATC	8 cut(s)	30, 240, 566, 802, 836, 930, 1052, 1405
MboI	GATC	8 cut(s)	28, 238, 564, 800, 834, 928, 1050, 1403
MboII	GAAGA	8 cut(s)	194, 200, 331, 453, 547, 628, 651, 907
MflI	RGATCY	3 cut(s)	28, 564, 1050
MhlI	GDGCHC	2 cut(s)	150, 1176
MluCI	AATT	3 cut(s)	19, 414, 1441
Mly113I	GGCGCC	2 cut(s)	594, 686
MlyI	GAGTC	3 cut(s)	1133, 1276, 1291
MreI	CGCCGGCG	1 cut(s)	119
MroNI	GCCGGC	3 cut(s)	77, 119, 155
MroXI	GAANNNNTTC	2 cut(s)	13, 914
MseI	TTAA	4 cut(s)	600, 1389, 1413, 1444
MspA1I	CMGCKG	2 cut(s)	383, 794
MspR9I	CCNGG	8 cut(s)	365, 920, 977, 1006, 1097, 1305, 1383, 1384
MvaI	CCWGG	2 cut(s)	920, 1097
MvnI	CGCG	8 cut(s)	117, 389, 768, 770, 887, 907, 993, 1014
NaeI	GCCGGC	3 cut(s)	79, 121, 157
NarI	GGCGCC	2 cut(s)	594, 686
NciI	CCSGG	6 cut(s)	365, 977, 1006, 1305, 1383, 1384
NcoI	CCATGG	1 cut(s)	1026
NdeII	GATC	8 cut(s)	28, 238, 564, 800, 834, 928, 1050, 1403
NgoMIV	GCCGGC	3 cut(s)	77, 119, 155
NlaIII	CATG	4 cut(s)	766, 949, 1030, 1160
NmeAIII	GCCGAG	1 cut(s)	1290
NmuCI	GTSAC	1 cut(s)	1324
NspI	RCATGY	1 cut(s)	1160
NspV	TTCGAA	1 cut(s)	17
PauI	GCGCGC	1 cut(s)	766
PciI	ACATGT	1 cut(s)	1156
PciSI	GCTCTTC	1 cut(s)	920
PcsI	WCGNNNNNNNCGW	3 cut(s)	141, 156, 254
PdiI	GCCGGC	3 cut(s)	79, 121, 157
PdmI	GAANNNNTTC	2 cut(s)	13, 914
PfeI	GAWTC	4 cut(s)	34, 89, 98, 109
Pfl23II	CGTACG	2 cut(s)	327, 510
PleI	GAGTC	3 cut(s)	1132, 1275, 1290
PluTI	GGCGCC	2 cut(s)	597, 689
PmaCI	CACGTG	1 cut(s)	1062
PmlI	CACGTG	1 cut(s)	1062
PpsI	GAGTC	3 cut(s)	1132, 1275, 1290
Ppu21I	YACGTR	1 cut(s)	1062
PpuMI	RGGWCCY	2 cut(s)	361, 606
PscI	ACATGT	1 cut(s)	1156
Psp5II	RGGWCCY	2 cut(s)	361, 606
Psp6I	CCWGG	2 cut(s)	918, 1095
PspCI	CACGTG	1 cut(s)	1062
PspGI	CCWGG	2 cut(s)	918, 1095
PspLI	CGTACG	2 cut(s)	327, 510
PspPI	GGNCC	7 cut(s)	346, 361, 606, 627, 772, 979, 1030
PspPPI	RGGWCCY	2 cut(s)	361, 606
PstI	CTGCAG	1 cut(s)	894
PsuI	RGATCY	3 cut(s)	28, 564, 1050
PteI	GCGCGC	1 cut(s)	766
PvuII	CAGCTG	1 cut(s)	383
RsaI	GTAC	7 cut(s)	143, 329, 423, 512, 884, 1010, 1094
RsaNI	GTAC	7 cut(s)	142, 328, 422, 511, 883, 1009, 1093
SalI	GTCGAC	1 cut(s)	247
SapI	GCTCTTC	1 cut(s)	920
SaqAI	TTAA	4 cut(s)	600, 1389, 1413, 1444
Sau3AI	GATC	8 cut(s)	28, 238, 564, 800, 834, 928, 1050, 1403
Sau96I	GGNCC	7 cut(s)	346, 361, 606, 627, 772, 979, 1030
SchI	GAGTC	3 cut(s)	1133, 1276, 1291
ScrFI	CCNGG	8 cut(s)	365, 920, 977, 1006, 1097, 1305, 1383, 1384
SduI	GDGCHC	2 cut(s)	150, 1176
SfaNI	GCATC	3 cut(s)	663, 699, 737
SfcI	CTRYAG	1 cut(s)	890
SfoI	GGCGCC	2 cut(s)	595, 687
SfuI	TTCGAA	1 cut(s)	17
SgrAI	CRCCGGYG	2 cut(s)	119, 827
SinI	GGWCC	5 cut(s)	361, 606, 627, 979, 1030
SmaI	CCCGGG	1 cut(s)	1384
SmlI	CTYRAG	1 cut(s)	575
SmoI	CTYRAG	1 cut(s)	575
Sse9I	AATT	3 cut(s)	19, 414, 1441
SspDI	GGCGCC	2 cut(s)	593, 685
SspMI	CTAG	2 cut(s)	662, 1419
StyD4I	CCNGG	8 cut(s)	363, 918, 975, 1004, 1095, 1303, 1381, 1382
StyI	CCWWGG	1 cut(s)	1026
TaaI	ACNGT	1 cut(s)	229
TaiI	ACGT	6 cut(s)	333, 746, 848, 941, 1064, 1331
TaqII	GACCGA	1 cut(s)	841
TasI	AATT	3 cut(s)	19, 414, 1441
TfiI	GAWTC	4 cut(s)	34, 89, 98, 109
Tru1I	TTAA	4 cut(s)	600, 1389, 1413, 1444
Tru9I	TTAA	4 cut(s)	600, 1389, 1413, 1444
TscAI	CASTG	2 cut(s)	528, 782
TseFI	GTSAC	1 cut(s)	1324
Tsp45I	GTSAC	1 cut(s)	1324
TspDTI	ATGAA	3 cut(s)	210, 332, 1289
TspGWI	ACGGA	3 cut(s)	186, 498, 619
TspMI	CCCGGG	1 cut(s)	1382
TspRI	CASTG	2 cut(s)	528, 782
VpaK11BI	GGWCC	5 cut(s)	361, 606, 627, 979, 1030
XagI	CCTNNNNNAGG	1 cut(s)	341
XapI	RAATTY	1 cut(s)	19
XceI	RCATGY	1 cut(s)	1160
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1093
XmaI	CCCGGG	1 cut(s)	1382
XmiI	GTMKAC	1 cut(s)	248
XmnI	GAANNNNTTC	2 cut(s)	13, 914
XspI	CTAG	2 cut(s)	662, 1419
ZraI	GACGTC	1 cut(s)	846

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.