Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0006941

Physical Location & Seq

Genomic Coordinates Forward (+)

3640582 .. 3648769

Gene Structure 8188 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g03720.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2871 bp

ATGACCCGACGAATCTCCGAGAAGCTCCGACTCTCTCTCTTCCCCTACAAGTCGAGCCTTCCCTTTCTCTGTCCTCCTCCCCATTCCTCTCTCTCCTCCACGCTCCACCTCTGCAAGTCCCTCGCACGCGCCCTCGCCGCCAAAACCCTAGCCCTCTTCTCCCTCCCTTTTTCCGACCACGACCACGACCGCGACGCTATGGCCGATTCCTTCGGCGACGACTCCTTCTGGGACCTCGACTTCCGCCCCCATTTCCGCTCCCAGCGCCCCCGCCTCCATGACGACTACGACGACAACGGCGACAACGACGAGGTTTTGGGAAATGCCGTTGATAAGGTGTACCTCGTTCCTTACAGGTGGTGGAAGGAGGCTCGGACGGAGGATGATCGCAATGGAGGGGTCCTTTACACTGCTACGACGGAGGACGACAACGCTGGTGCTGAAATTGTATTGAATTTGAAGAAGAATGACGTCGTTGAAGAAGGGTTTTCCGGGCGCGAATACGCCTTGGTCTCTGAATCAACGTGGTGTCGCGCTCTCATACGGCATAATGATTTCAACGCAGCAGCGAAGGATAACGTGAGCTTTTTTGGTGCAGAAAACTTAAACGATATTTATTGTCTACAAATTAGGCTATTTGTTTCCTGGGAAACAAATTCATTGTCCGTAAAGATCACCCAAAAGGATAATGCAATAGTTTCCTACAAAAGGGCCTGTAATGTTTTCAGTTCAGAGTATGTTCCGTTGCATATTTGGGACTTCTCTGGGCAGACAACCCAATTTTTCATGAACGACAGAGTTAATTTGCCAAGCGATATTCCTGGACAACTGAACAAAGAGATTCTCCTTGAATTGCGACTCCATGGATTTTCAGACTATATGAAATGTTCAGATTGGAGGAGCGAAGAAGTGGCTGATAAAGAGTCAAGTTTGGATGGTTCTACTTATGGTGGCTCTATTAAGATGAATGGAAGCACTGACTATGTGAATCCTTATTTAACTTCAACCAACTCCTTGCAAATTGGTATAATCTATAGAAGAGTTGGGTCCTTAGGCCTTACTGGACTAGAGAATCTTGGGAACACTTGTTTTATGAACAGTGCCATCCAATGCTTGGTGCATACTCCAAAGCTGGTTGATTACTTTCTAGGAGATTACCGGAAGGACATAAATTATGCAAATCCACTAGGACTGAAAGGAGAGCTTGCTTTAGCATTTGGAGAGTTGTTGAGGAGGTTATGGGCTCCAGGTGCAAGGTCAGTGGCTCCAACGATGTTCAAGTTAAAACTTGCTAATTTTGCTCCCCAATTCAGTGGCTATAATCAGCATGATTCCCAGGAACTTCTTGCTTTTTTGTTGGATGGTCTCCACGAAGATCTAAATCGTGTAAAATGCAAACCTTACATTGAAGCTAAGGATGTGGAAGGTCGTCCAGATGATGAGGTAGCAGAAGAATATTGGCAAAATCACCTTGCTCGGAATGACTCAATCGTTGTCGATGTGTGCCAAGGTCAGTACCGGTCAAAATTGGTGTGCCCTGTTTGCAACAAGGTGTCTGTTATGTTTGACCCATTTATGTACCTTTCGCTACCGTTACCTTCAACATCAATGCGGACTATGACTTTGACGGTCCTAAGTACAGATGGGACTGCAATGCCATCTACATGTACGGTGACAGTGCCCCAGGGTGGGAGGTTGATGGATCTTACTAATGCCTTAAGCACTGCATGTTTCTTAAGAGATGATGAAACTCTGATGGTAGCTGAGATATACAAGAGTCGCATTTTTCGTCTACTGGAAGATCCATTTGATTCATTAGCCTTGATCAGAGATGGTGACCTGTTGGTTGCTTATCGGTTACCAAAGGATTGTGAGTCGTCCCTTTTGGTTACGTTTATTCATCAGCAGATGGATGTGGGATTTAATAATGGAGAGATGGGATTAGTCCCACAGGCGTTTGGCGTACCCCTCATAGCAAGGTTGCCTGATGTTTGCAATGGATCTGATATTCGTAACAAGTTCCTGAAAGTACTAAACCCATACTTGATGCCTACTGGAGATGCATTAGATATTTTTGATTATGATGATATTGGAAATTATGCTACTGAAGATTCTAACAAGGAGGATGCTGCTACTTCTACGATTATGGATAATGATGCTTACGCGGACAGGGAATCAGGGGATGAAGCACATTTGGATAATGACTTCCAGTTTTACTTAACAGATACAAAGGGAGCAATAAGAGACACCTTGATAGACATGAATGAGCCAATAGTGGTCTCAGAGTTGCCTAAGAGGTTGAGTGTACTTGTTTTATGGTCTGATAAAATGACTAAAAAGTACGATACATGCCTTCTAAGCAATTTGCCGGAAATTTTCAAGCCCCAATTTTTGGTGAGGAGGCCTCAAGAATCCATTTCTCTGTACAAATGCCTTGAAGCCTTTATGAAGGAGGAACCTCTAGGGCCAGAAGATATGTGGTACTGCCCTACCTGCAAGAAGCCTCAACAAGCTAGCAAAAAGTTAGATCTTTGGAGATTGCCTGAGATTTTGGTTATTCATCTGAAAAGATTCTCGTACAGCCGTTATTTTAAGAACAAGCTAGAAACATTTGTTGACTTTCCAATTCATGATCTGGATTTTTCTTGCTACAGTGCCCACCAAAATAGCCAGTTATCCAGCCGATACATGTTGTATGCGATTAGTAATCACTATGGTGGCATGGGCGGTGGTCACTATACTGCATTTGCTCAACTCGGTAATGGTTCGTGGTATGAGTTTGATGATGACAGGGTTTGTCCTGTTGGGGAAGAGACAATCAAGACATCATCTGCATATGTTCTTTTCTACCGAAGAGTGGCAGATGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

UCH

Protein Analysis

957

Amino Acids

108.47

Weight (kDa)

5.04

Isoelectric Point (pI)

41.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006941)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g20680 FvH4_6g20680 FvH4_6g20680
malus_domestica	MD00G1072700.v1.1 MD12G1043100.v1.1 MD14G1042200.v1.1
prunus_persica	Prupe.7G091700_v2.0.a1 Prupe.7G091700_v2.0.a1 Prupe.7G091700_v2.0.a1 Prupe.7G091700_v2.0.a1
pyrus_communis	pycom12g03720 pycom14g03580
rosa_chinensis	RchiOBHm_Chr3g0476581
rosa_laevigata	RLG00000001984 RLG00000023761
rosa_multiflora	Rmu_sc0008241.1_g000007 Rmu_sc0020945.1_g000001
rosa_roxburghii	Rroxscaffold_6G00405190
rosa_rugosa	Rorug03G0155400
rosa_samantha	Rh3AG206000 Rh3BG238600 Rh3CG232300 Rh3DG232200 Rh7DG310400
rosa_wichuraiana	Rw3G018760 Rw7G026340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	474
Acc36I	ACCTGC	1 cut(s)	2501
AccB7I	CCANNNNNTGG	2 cut(s)	1114, 2392
AccBSI	CCGCTC	1 cut(s)	258
AccI	GTMKAC	2 cut(s)	622, 1792
AccII	CGCG	5 cut(s)	129, 192, 498, 534, 2165
AciI	CCGC	8 cut(s)	138, 190, 244, 256, 271, 1612, 2165, 2727
AclWI	GGATC	3 cut(s)	1710, 1796, 2008
AcoI	YGGCCR	1 cut(s)	201
AcsI	RAATTY	3 cut(s)	454, 655, 2373
AcuI	CTGAAG	1 cut(s)	2127
AcyI	GRCGYC	1 cut(s)	471
AfiI	CCNNNNNNNGG	6 cut(s)	708, 1114, 1688, 1689, 2392, 2857
AflII	CTTAAG	2 cut(s)	1717, 1735
AflIII	ACRYGT	2 cut(s)	1664, 2688
AgeI	ACCGGT	1 cut(s)	1518
AjnI	CCWGG	5 cut(s)	644, 820, 1246, 1335, 1683
AleI	CACNNNNGTG	1 cut(s)	2715
AluBI	AGCT	8 cut(s)	25, 585, 1132, 1204, 1412, 1763, 2513, 2602
AluI	AGCT	8 cut(s)	25, 585, 1132, 1204, 1412, 1763, 2513, 2602
Alw26I	GTCTC	5 cut(s)	517, 1370, 2238, 2284, 2807
AlwI	GGATC	3 cut(s)	1710, 1796, 2008
AoxI	GGCC	5 cut(s)	201, 711, 1054, 2402, 2465
ApeKI	GCWGC	3 cut(s)	563, 566, 2129
ApoI	RAATTY	3 cut(s)	454, 655, 2373
ArsI	GACNNNNNNTTYG	4 cut(s)	647, 679, 1606, 1638
AsiGI	ACCGGT	1 cut(s)	1518
Asp700I	GAANNNNTTC	1 cut(s)	2570
AspLEI	GCGC	4 cut(s)	131, 267, 498, 536
AspS9I	GGNCC	6 cut(s)	232, 400, 711, 1047, 1630, 2465
AsuC2I	CCSGG	1 cut(s)	493
AsuHPI	GGTGA	5 cut(s)	667, 1460, 1684, 1847, 2407
AsuNHI	GCTAGC	1 cut(s)	2513
AvaII	GGWCC	4 cut(s)	232, 400, 1047, 1630
AxyI	CCTNAGG	1 cut(s)	1051
BaeGI	GKGCMC	3 cut(s)	1538, 1683, 2659
BanII	GRGCYC	1 cut(s)	1246
BbvI	GCAGC	3 cut(s)	575, 578, 2116
BceAI	ACGGC	4 cut(s)	311, 313, 560, 2568
BcgI	CGANNNNNNTGC	2 cut(s)	103, 137
BciT130I	CCWGG	5 cut(s)	646, 822, 1248, 1337, 1685
BclI	TGATCA	1 cut(s)	1824
BcnI	CCSGG	1 cut(s)	493
BcoDI	GTCTC	5 cut(s)	517, 1370, 2238, 2284, 2807
BfaI	CTAG	7 cut(s)	149, 1067, 1148, 1187, 2462, 2514, 2603
BfmI	CTRYAG	2 cut(s)	1033, 2650
BfoI	RGCGCY	1 cut(s)	268
BfrI	CTTAAG	2 cut(s)	1717, 1735
BfuAI	ACCTGC	1 cut(s)	2501
BglII	AGATCT	2 cut(s)	1375, 2527
BisI	GCNGC	4 cut(s)	138, 564, 567, 2130
BlsI	GCNGC	4 cut(s)	139, 565, 568, 2131
BmcAI	AGTACT	1 cut(s)	2031
Bme1390I	CCNGG	6 cut(s)	493, 646, 822, 1248, 1337, 1685
Bme18I	GGWCC	4 cut(s)	232, 400, 1047, 1630
BmgT120I	GGNCC	6 cut(s)	232, 400, 711, 1047, 1630, 2465
BmiI	GGNNCC	6 cut(s)	233, 401, 1048, 1245, 1266, 2457
BmrFI	CCNGG	6 cut(s)	493, 646, 822, 1248, 1337, 1685
BmsI	GCATC	4 cut(s)	2037, 2050, 2116, 2146
BmtI	GCTAGC	1 cut(s)	2517
BplI	GAGNNNNNCTC	2 cut(s)	2389, 2421
BpmI	CTGGAG	2 cut(s)	1230, 2076
Bpu10I	CCTNAGC	1 cut(s)	1413
BpuEI	CTTGAG	1 cut(s)	2391
BpuMI	CCSGG	1 cut(s)	493
BsaBI	GATNNNNATC	1 cut(s)	1380
BsaHI	GRCGYC	1 cut(s)	471
BsaI	GGTCTC	3 cut(s)	517, 1370, 2284
BsaJI	CCNNGG	7 cut(s)	507, 645, 862, 1335, 1507, 1683, 1684
BsaWI	WCCGGW	2 cut(s)	1158, 1518
Bsc4I	CCNNNNNNNGG	6 cut(s)	708, 1114, 1688, 1689, 2392, 2857
Bse118I	RCCGGY	1 cut(s)	1518
Bse1I	ACTGG	5 cut(s)	1066, 1800, 2059, 2209, 2671
Bse21I	CCTNAGG	1 cut(s)	1051
Bse3DI	GCAATG	3 cut(s)	397, 1659, 2002
Bse8I	GATNNNNATC	1 cut(s)	1380
BseBI	CCWGG	5 cut(s)	646, 822, 1248, 1337, 1685
BseDI	CCNNGG	7 cut(s)	507, 645, 862, 1335, 1507, 1683, 1684
BseGI	GGATG	8 cut(s)	388, 940, 1104, 1366, 1423, 1918, 2131, 2188
BseJI	GATNNNNATC	1 cut(s)	1380
BseLI	CCNNNNNNNGG	6 cut(s)	708, 1114, 1688, 1689, 2392, 2857
BseMI	GCAATG	3 cut(s)	397, 1659, 2002
BseMII	CTCAG	3 cut(s)	1755, 2295, 2535
BseNI	ACTGG	5 cut(s)	1066, 1800, 2059, 2209, 2671
BseRI	GAGGAG	5 cut(s)	66, 85, 913, 1246, 2413
BseSI	GKGCMC	3 cut(s)	1538, 1683, 2659
BseXI	GCAGC	3 cut(s)	575, 578, 2116
BseYI	CCCAGC	1 cut(s)	261
BsgI	GTGCAG	1 cut(s)	615
Bsh1236I	CGCG	5 cut(s)	129, 192, 498, 534, 2165
Bsh1285I	CGRYCG	1 cut(s)	190
BshFI	GGCC	5 cut(s)	203, 713, 1056, 2404, 2467
BshTI	ACCGGT	1 cut(s)	1518
BsiEI	CGRYCG	1 cut(s)	190
BsiSI	CCGG	4 cut(s)	492, 1159, 1519, 2369
BslFI	GGGAC	6 cut(s)	103, 245, 770, 1660, 1864, 1931
BslI	CCNNNNNNNGG	6 cut(s)	708, 1114, 1688, 1689, 2392, 2857
BsmAI	GTCTC	5 cut(s)	517, 1370, 2238, 2284, 2807
BsmFI	GGGAC	6 cut(s)	103, 245, 770, 1660, 1864, 1931
BsnI	GGCC	5 cut(s)	203, 713, 1056, 2404, 2467
Bso31I	GGTCTC	3 cut(s)	517, 1370, 2284
Bsp1286I	GDGCHC	4 cut(s)	1246, 1538, 1683, 2659
Bsp1407I	TGTACA	1 cut(s)	2424
Bsp143I	GATC	9 cut(s)	385, 672, 1375, 1702, 1801, 1824, 2000, 2527, 2632
Bsp19I	CCATGG	1 cut(s)	862
BspACI	CCGC	8 cut(s)	138, 190, 244, 256, 271, 1612, 2165, 2727
BspANI	GGCC	5 cut(s)	203, 713, 1056, 2404, 2467
BspCNI	CTCAG	3 cut(s)	1756, 2294, 2536
BspFNI	CGCG	5 cut(s)	129, 192, 498, 534, 2165
BspHI	TCATGA	2 cut(s)	786, 2629
BspLI	GGNNCC	6 cut(s)	233, 401, 1048, 1245, 1266, 2457
BspMI	ACCTGC	1 cut(s)	2501
BspOI	GCTAGC	1 cut(s)	2517
BspPI	GGATC	3 cut(s)	1710, 1796, 2008
BspTI	CTTAAG	2 cut(s)	1717, 1735
BspTNI	GGTCTC	3 cut(s)	517, 1370, 2284
BsrBI	CCGCTC	1 cut(s)	258
BsrDI	GCAATG	3 cut(s)	397, 1659, 2002
BsrFI	RCCGGY	1 cut(s)	1518
BsrGI	TGTACA	1 cut(s)	2424
BsrI	ACTGG	5 cut(s)	1066, 1800, 2059, 2209, 2671
BssAI	RCCGGY	1 cut(s)	1518
BssECI	CCNNGG	7 cut(s)	507, 645, 862, 1335, 1507, 1683, 1684
BssMI	GATC	9 cut(s)	385, 672, 1375, 1702, 1801, 1824, 2000, 2527, 2632
BssNI	GRCGYC	1 cut(s)	471
BssT1I	CCWWGG	3 cut(s)	507, 862, 1507
Bst2UI	CCWGG	5 cut(s)	646, 822, 1248, 1337, 1685
Bst4CI	ACNGT	6 cut(s)	1100, 1593, 1630, 1672, 1678, 2654
Bst6I	CTCTTC	5 cut(s)	44, 161, 1033, 2805, 2848
BstACI	GRCGYC	1 cut(s)	471
BstAFI	CTTAAG	2 cut(s)	1717, 1735
BstAUI	TGTACA	1 cut(s)	2424
BstC8I	GCNNGC	3 cut(s)	127, 1206, 2515
BstDEI	CTNAG	8 cut(s)	1051, 1413, 1634, 1764, 2281, 2292, 2357, 2544
BstDSI	CCRYGG	1 cut(s)	862
BstEII	GGTNACC	2 cut(s)	1835, 1857
BstENI	CCTNNNNNAGG	1 cut(s)	706
BstF5I	GGATG	8 cut(s)	388, 940, 1104, 1366, 1423, 1918, 2131, 2188
BstFNI	CGCG	5 cut(s)	129, 192, 498, 534, 2165
BstH2I	RGCGCY	1 cut(s)	268
BstHHI	GCGC	4 cut(s)	131, 267, 498, 536
BstKTI	GATC	9 cut(s)	388, 675, 1378, 1705, 1804, 1827, 2003, 2530, 2635
BstMAI	GTCTC	5 cut(s)	517, 1370, 2238, 2284, 2807
BstMBI	GATC	9 cut(s)	385, 672, 1375, 1702, 1801, 1824, 2000, 2527, 2632
BstMCI	CGRYCG	1 cut(s)	190
BstMWI	GCNNNNNNNGC	7 cut(s)	137, 264, 1250, 1298, 1542, 2358, 2493
BstNI	CCWGG	5 cut(s)	646, 822, 1248, 1337, 1685
BstNSI	RCATGY	4 cut(s)	1668, 1731, 2352, 2692
BstPI	GGTNACC	2 cut(s)	1835, 1857
BstSCI	CCNGG	6 cut(s)	491, 644, 820, 1246, 1335, 1683
BstSFI	CTRYAG	2 cut(s)	1033, 2650
BstSLI	GKGCMC	3 cut(s)	1538, 1683, 2659
BstUI	CGCG	5 cut(s)	129, 192, 498, 534, 2165
BstV1I	GCAGC	3 cut(s)	575, 578, 2116
BstX2I	RGATCY	5 cut(s)	1375, 1702, 1801, 2000, 2527
BstXI	CCANNNNNNTGG	1 cut(s)	1313
BstYI	RGATCY	5 cut(s)	1375, 1702, 1801, 2000, 2527
Bsu36I	CCTNAGG	1 cut(s)	1051
BsuRI	GGCC	5 cut(s)	203, 713, 1056, 2404, 2467
BtgI	CCRYGG	1 cut(s)	862
BtsCI	GGATG	8 cut(s)	388, 940, 1104, 1366, 1423, 1918, 2131, 2188
BtsI	GCAGTG	2 cut(s)	408, 1722
BtsIMutI	CAGTG	8 cut(s)	408, 975, 1105, 1266, 1318, 1683, 1722, 2659
BveI	ACCTGC	1 cut(s)	2501
Cac8I	GCNNGC	3 cut(s)	127, 1206, 2515
CciI	TCATGA	2 cut(s)	786, 2629
CfoI	GCGC	4 cut(s)	131, 267, 498, 536
Cfr10I	RCCGGY	1 cut(s)	1518
Cfr13I	GGNCC	6 cut(s)	232, 400, 711, 1047, 1630, 2465
CseI	GACGC	1 cut(s)	203
CspAI	ACCGGT	1 cut(s)	1518
CspCI	CAANNNNNGTGG	2 cut(s)	1242, 1277
DdeI	CTNAG	8 cut(s)	1051, 1413, 1634, 1764, 2281, 2292, 2357, 2544
DpnI	GATC	9 cut(s)	387, 674, 1377, 1704, 1803, 1826, 2002, 2529, 2634
DpnII	GATC	9 cut(s)	385, 672, 1375, 1702, 1801, 1824, 2000, 2527, 2632
EaeI	YGGCCR	1 cut(s)	201
Eam1104I	CTCTTC	5 cut(s)	44, 161, 1033, 2805, 2848
EarI	CTCTTC	5 cut(s)	44, 161, 1033, 2805, 2848
EciI	GGCGGA	1 cut(s)	233
Eco130I	CCWWGG	3 cut(s)	507, 862, 1507
Eco147I	AGGCCT	2 cut(s)	1056, 2404
Eco24I	GRGCYC	1 cut(s)	1246
Eco31I	GGTCTC	3 cut(s)	517, 1370, 2284
Eco47I	GGWCC	4 cut(s)	232, 400, 1047, 1630
Eco57I	CTGAAG	1 cut(s)	2127
Eco81I	CCTNAGG	1 cut(s)	1051
Eco91I	GGTNACC	2 cut(s)	1835, 1857
EcoNI	CCTNNNNNAGG	1 cut(s)	706
EcoO109I	RGGNCCY	4 cut(s)	232, 400, 711, 1047
EcoO65I	GGTNACC	2 cut(s)	1835, 1857
EcoRII	CCWGG	5 cut(s)	644, 820, 1246, 1335, 1683
EcoT14I	CCWWGG	3 cut(s)	507, 862, 1507
EcoT22I	ATGCAT	1 cut(s)	2065
EcoT38I	GRGCYC	1 cut(s)	1246
ErhI	CCWWGG	3 cut(s)	507, 862, 1507
FalI	AAGNNNNNCTT	2 cut(s)	1188, 1220
FaqI	GGGAC	6 cut(s)	103, 245, 770, 1660, 1864, 1931
FauI	CCCGC	1 cut(s)	278
FauNDI	CATATG	1 cut(s)	2836
FbaI	TGATCA	1 cut(s)	1824
FblI	GTMKAC	2 cut(s)	622, 1792
Fnu4HI	GCNGC	4 cut(s)	138, 564, 567, 2130
FokI	GGATG	8 cut(s)	395, 947, 1091, 1373, 1430, 1925, 2138, 2195
FriOI	GRGCYC	1 cut(s)	1246
Fsp4HI	GCNGC	4 cut(s)	138, 564, 567, 2130
FspBI	CTAG	7 cut(s)	149, 1067, 1148, 1187, 2462, 2514, 2603
GlaI	GCGC	4 cut(s)	130, 266, 497, 535
GluI	GCNGC	4 cut(s)	138, 564, 567, 2130
GsaI	CCCAGC	1 cut(s)	265
GsuI	CTGGAG	2 cut(s)	1230, 2076
HaeII	RGCGCY	1 cut(s)	268
HaeIII	GGCC	5 cut(s)	203, 713, 1056, 2404, 2467
HapII	CCGG	4 cut(s)	492, 1159, 1519, 2369
HgaI	GACGC	1 cut(s)	203
HhaI	GCGC	4 cut(s)	131, 267, 498, 536
Hin1I	GRCGYC	1 cut(s)	471
Hin6I	GCGC	4 cut(s)	129, 265, 496, 534
HinP1I	GCGC	4 cut(s)	129, 265, 496, 534
HincII	GTYRAC	1 cut(s)	2617
HindII	GTYRAC	1 cut(s)	2617
HpaII	CCGG	4 cut(s)	492, 1159, 1519, 2369
HphI	GGTGA	5 cut(s)	667, 1460, 1684, 1847, 2407
Hpy166II	GTNNAC	5 cut(s)	340, 623, 1793, 2306, 2617
Hpy188III	TCNNGA	7 cut(s)	787, 1433, 2023, 2408, 2630, 2636, 2821
Hpy8I	GTNNAC	5 cut(s)	340, 623, 1793, 2306, 2617
Hpy99I	CGWCG	7 cut(s)	12, 197, 221, 293, 311, 421, 476
HpyCH4III	ACNGT	6 cut(s)	1100, 1593, 1630, 1672, 1678, 2654
HpyCH4IV	ACGT	4 cut(s)	471, 524, 579, 1892
HpyF10VI	GCNNNNNNNGC	7 cut(s)	137, 264, 1250, 1298, 1542, 2358, 2493
HpyF3I	CTNAG	8 cut(s)	1051, 1413, 1634, 1764, 2281, 2292, 2357, 2544
HpySE526I	ACGT	4 cut(s)	471, 524, 579, 1892
Hsp92I	GRCGYC	1 cut(s)	471
HspAI	GCGC	4 cut(s)	129, 265, 496, 534
Ksp22I	TGATCA	1 cut(s)	1824
Kzo9I	GATC	9 cut(s)	385, 672, 1375, 1702, 1801, 1824, 2000, 2527, 2632
LmnI	GCTCC	8 cut(s)	30, 108, 263, 900, 1249, 1270, 1306, 2234
Lsp1109I	GCAGC	3 cut(s)	575, 578, 2116
LweI	GCATC	4 cut(s)	2037, 2050, 2116, 2146
MaeI	CTAG	7 cut(s)	149, 1067, 1148, 1187, 2462, 2514, 2603
MaeII	ACGT	4 cut(s)	471, 524, 579, 1892
MaeIII	GTNAC	7 cut(s)	1593, 1672, 1835, 1857, 1888, 2012, 2732
MalI	GATC	9 cut(s)	387, 674, 1377, 1704, 1803, 1826, 2002, 2529, 2634
MbiI	CCGCTC	1 cut(s)	258
MboI	GATC	9 cut(s)	385, 672, 1375, 1702, 1801, 1824, 2000, 2527, 2632
MflI	RGATCY	5 cut(s)	1375, 1702, 1801, 2000, 2527
MhlI	GDGCHC	4 cut(s)	1246, 1538, 1683, 2659
MlyI	GAGTC	7 cut(s)	24, 215, 852, 932, 1478, 1786, 1883
MmeI	TCCRAC	4 cut(s)	52, 198, 1292, 1338
Mph1103I	ATGCAT	1 cut(s)	2065
MroXI	GAANNNNTTC	1 cut(s)	2570
MslI	CAYNNNNRTG	2 cut(s)	1663, 2715
MspCI	CTTAAG	2 cut(s)	1717, 1735
MspI	CCGG	4 cut(s)	492, 1159, 1519, 2369
MspR9I	CCNGG	6 cut(s)	493, 646, 822, 1248, 1337, 1685
MvaI	CCWGG	5 cut(s)	646, 822, 1248, 1337, 1685
MvnI	CGCG	5 cut(s)	129, 192, 498, 534, 2165
MwoI	GCNNNNNNNGC	7 cut(s)	137, 264, 1250, 1298, 1542, 2358, 2493
NciI	CCSGG	1 cut(s)	493
NcoI	CCATGG	1 cut(s)	862
NdeI	CATATG	1 cut(s)	2836
NdeII	GATC	9 cut(s)	385, 672, 1375, 1702, 1801, 1824, 2000, 2527, 2632
NheI	GCTAGC	1 cut(s)	2513
NlaIV	GGNNCC	6 cut(s)	233, 401, 1048, 1245, 1266, 2457
NmuCI	GTSAC	3 cut(s)	1672, 1835, 2732
NsiI	ATGCAT	1 cut(s)	2065
NspI	RCATGY	4 cut(s)	1668, 1731, 2352, 2692
OliI	CACNNNNGTG	1 cut(s)	2715
PagI	TCATGA	2 cut(s)	786, 2629
PasI	CCCWGGG	1 cut(s)	1684
PceI	AGGCCT	2 cut(s)	1056, 2404
PciI	ACATGT	2 cut(s)	1664, 2688
PcsI	WCGNNNNNNNCGW	5 cut(s)	201, 288, 297, 303, 1786
PdmI	GAANNNNTTC	1 cut(s)	2570
PflMI	CCANNNNNTGG	2 cut(s)	1114, 2392
PfoI	TCCNGGA	1 cut(s)	820
PinAI	ACCGGT	1 cut(s)	1518
PkrI	GCNGC	4 cut(s)	139, 565, 568, 2131
PleI	GAGTC	7 cut(s)	24, 215, 852, 931, 1478, 1785, 1882
PpsI	GAGTC	7 cut(s)	24, 215, 852, 931, 1478, 1785, 1882
PpuMI	RGGWCCY	3 cut(s)	232, 400, 1047
PscI	ACATGT	2 cut(s)	1664, 2688
Psp5II	RGGWCCY	3 cut(s)	232, 400, 1047
Psp6I	CCWGG	5 cut(s)	644, 820, 1246, 1335, 1683
PspEI	GGTNACC	2 cut(s)	1835, 1857
PspFI	CCCAGC	1 cut(s)	261
PspGI	CCWGG	5 cut(s)	644, 820, 1246, 1335, 1683
PspN4I	GGNNCC	6 cut(s)	233, 401, 1048, 1245, 1266, 2457
PspPI	GGNCC	6 cut(s)	232, 400, 711, 1047, 1630, 2465
PspPPI	RGGWCCY	3 cut(s)	232, 400, 1047
PsuI	RGATCY	5 cut(s)	1375, 1702, 1801, 2000, 2527
RseI	CAYNNNNRTG	2 cut(s)	1663, 2715
SatI	GCNGC	4 cut(s)	138, 564, 567, 2130
Sau3AI	GATC	9 cut(s)	385, 672, 1375, 1702, 1801, 1824, 2000, 2527, 2632
Sau96I	GGNCC	6 cut(s)	232, 400, 711, 1047, 1630, 2465
ScaI	AGTACT	1 cut(s)	2031
SchI	GAGTC	7 cut(s)	24, 215, 852, 932, 1478, 1786, 1883
ScrFI	CCNGG	6 cut(s)	493, 646, 822, 1248, 1337, 1685
SduI	GDGCHC	4 cut(s)	1246, 1538, 1683, 2659
SfaNI	GCATC	4 cut(s)	2037, 2050, 2116, 2146
SfcI	CTRYAG	2 cut(s)	1033, 2650
SinI	GGWCC	4 cut(s)	232, 400, 1047, 1630
SmiMI	CAYNNNNRTG	2 cut(s)	1663, 2715
SmlI	CTYRAG	3 cut(s)	1717, 1735, 2406
SmoI	CTYRAG	3 cut(s)	1717, 1735, 2406
SseBI	AGGCCT	2 cut(s)	1056, 2404
SsiI	CCGC	8 cut(s)	138, 190, 244, 256, 271, 1612, 2165, 2727
SspI	AATATT	1 cut(s)	1457
SspMI	CTAG	7 cut(s)	149, 1067, 1148, 1187, 2462, 2514, 2603
StuI	AGGCCT	2 cut(s)	1056, 2404
StyD4I	CCNGG	6 cut(s)	491, 644, 820, 1246, 1335, 1683
StyI	CCWWGG	3 cut(s)	507, 862, 1507
TaaI	ACNGT	6 cut(s)	1100, 1593, 1630, 1672, 1678, 2654
TaiI	ACGT	4 cut(s)	474, 527, 582, 1895
TaqI	TCGA	3 cut(s)	53, 237, 1497
TatI	WGTACW	4 cut(s)	1637, 2029, 2305, 2424
TauI	GCSGC	1 cut(s)	140
TscAI	CASTG	8 cut(s)	415, 982, 1105, 1266, 1318, 1683, 1729, 2659
TseFI	GTSAC	3 cut(s)	1672, 1835, 2732
TseI	GCWGC	3 cut(s)	563, 566, 2129
Tsp45I	GTSAC	3 cut(s)	1672, 1835, 2732
TspGWI	ACGGA	4 cut(s)	392, 434, 655, 732
TspRI	CASTG	8 cut(s)	415, 982, 1105, 1266, 1318, 1683, 1729, 2659
Van91I	CCANNNNNTGG	2 cut(s)	1114, 2392
Vha464I	CTTAAG	2 cut(s)	1717, 1735
VpaK11BI	GGWCC	4 cut(s)	232, 400, 1047, 1630
XagI	CCTNNNNNAGG	1 cut(s)	706
XapI	RAATTY	3 cut(s)	454, 655, 2373
XceI	RCATGY	4 cut(s)	1668, 1731, 2352, 2692
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1111, 2475
XmiI	GTMKAC	2 cut(s)	622, 1792
XmnI	GAANNNNTTC	1 cut(s)	2570
XspI	CTAG	7 cut(s)	149, 1067, 1148, 1187, 2462, 2514, 2603
ZraI	GACGTC	1 cut(s)	472
ZrmI	AGTACT	1 cut(s)	2031
Zsp2I	ATGCAT	1 cut(s)	2065

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.