Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0006941

Physical Location & Seq

Genomic Coordinates Forward (+)

3023680 .. 3030588

Gene Structure 6909 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g03580.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2736 bp

ATGCTCTATTACAAAATGTCCTTTCTCGGCCACGCTCACATTCAGCGCGTTGAAGACACCCACATCCACCCATGTGGGGTCCACACAAATGGAGGGTGTGACTCACTCTGTATTATGACCCGGCGACTCTACGAGAAGCTCCGTCTCTCTCTCTTCCCCGACAAGCCGCCCCTCCGCTTTCTCTCTCTCCCCTCCACGCTCCACCTTTGCAAGTCCCTCGCACGCGCCGTCGCGGCCAAAACCCTAGCGCTCTTCTCCCCCCACTCCGAAGTTCACGACGCCATGGACGGTTCCTTCGGCGACGACGCCTTCTGGGACCTCGACTTCCGCCCCCATTTCCGCTCCCAGCGCCCCCGCCTCCACGACGACTACGACGACAACGGCGACAACGACGGCGTTCTGGGCAATGCGGTTGATAAGGTCTACCTCGTTCCCTACAGGTGGTGGAAGGAGGCTCGGACGGAGGAGGATCGCAATGGAGGGGTCCTGTACACTGCTACGATGGAGGACGACGACGACGACGCCGCCGCTGAAATTGTACTGAATTTGAAGAAGAACGACGTCGTCGAAGAGGGGTTTTCGGGGCGCGAGTACGCCTTGGTCCCTGAATCAACGTGGTGTCGCGCTCTCATACGGCATAATGATTTCAACGCAGCAAAGAAGGATAACGTGAGCTTTTTTGGTGCAGAAAACTTGTGGAAGGATATTTTTTCTCTACAAATTAGGCTATTTGTTTCCTGGGAAACAAATTCATTGTTCGTAAAGATCAGCCAAAAGGATAATGCAATAGTCTCGTACAAGAGGGCCTGTAATATTTTCAGTTCAGAGTATGTTCCGTTGCTTATTTGGGACTTCTCTGGGCAGACAACCCAATTTTTCATGAATGACAGAGTTGATTTGCTTAGCAATATTTCTGAACAGCTGAACAAAGAGATTCTCCTTGAATTGCGACTCCATGGATTTTCAGATTATATGAAAGGTACAGATTGGAGGAGCGATGAACTGGCTGATAAAGAGTCAAGTTTGGATGGTTCTACTTCTACTTATGGTGGCTCTATTAAGATGAATGGAACAACTGACTATGTGAATCCTTATTTAACTCCAACTAACTCCTTGCAAAGTGGTATAATCTATAGAGGAGTATGTTCCTTAGGCCTTACTGGACTAGAGAATCTTGGGAATACTTGTTTTATGAACAGTGCCATCCAATGCTTGGTGCATACTCCGAAGCTGGTTGATTACTTTCTAGGAGATTACCAGAAGGACATAAATTACACAAATCCACTAGGATTGAAAGGAGAGCTTGCTTTAGCATTTGGAGAGTTGTTGAGGAGGTTATGGGCTCCAGGTGCAAGGCCAGTGGCTCCAACAATGTTCAAGTTAAAACTTGCTAATTTTGCTCCCCAATTCAGTGGCTATAATCAGCATGATTCCCAGGAACTTCTTGCTTTTTTGTTGGATGGTCTCCATGAAGATCTAAATCGTGTAAAATGCAAGCCATATATTGAAGCTAAGGATGTAGAGGGTCGTCCTGATGATGAAGTAGCAGAAGAATATTGGCAAAATCACCTTGCTCGGAATGACTCAATCATTGTTGATGTGTGCCAAGGTCAGTACCGGTCAAAATTGGTTTGCCCTGCTTGCAACAAGGTGTCTGTTATGTTTGACCCATTTATGTACCTTTCGATACCGTTACCTTCAACATCAATGCGTACTATGACTTTGACGGTCCTAAGCACAGATGGGACTGCGATGCCGTCTACACTTACTGTGACGGTGCCCCAGGGCGGAAGGTTGATGGATCTTACTAATGCCTTAAGCACTGCATGTTGCTTAAGAGATGATGAAACTCTGTTGGTAGCTGAGATATACAAGAGTCGTATTTTTCGTCTGCTGGAAGATCCATTTGATTCATTTGTCTTGATCAGAGATGGTGACCTGTTGGTTGCTTATCGGTTGCCAAAGGATTGTGAGTCGTCCCTTTTGGTTACTTTTATTCATCAGCAGATGGACGTGGGCTACAGTAATGGAGACATGAGCTTAGTCCCACAGGCGTTTGGTGTTCCCCTCATAGCAAGGTTGCCTGATGTTTGCAATGGATCTGATATTCGTAACGAGTTCCTGAAAGTACTAAATCCATACTTGATGCCTACTGGAGATGCATTAGATATTTTTGATGATGGTACTGGAAATTATGCTACTGAAGATTCTAACAAGGAGGATGCTACTACTCCTACGATTATGGATAATGATGCTTACTCGGACAGGGAAGCAGGGGATGAAGCACATTTGGATAATGACTTCCAGTTTTACTTAACAGATACAAAGGCAGCTATCGAAGACACCTTGATAGAGAAGAATGAGCCAATAGTGCTCTCAAAGTTGCCTAAGAGGTTGAGTGTTCTTGTTTTATGGTCCGATAAAATGACTAAAAAGTACGATACATGCCTTCTAAGCAATTTGCCGGAAATTTTCAAGCCCCAATTTTTTGTGAGGAGGCCTCAAGAATCTGTTTCTCTGGACAAATGCCTGGAAGCCTTTATGAAGGAAGAACCTTTAGGACCAGAAGATATGTGGTACTGCCCTACCTGCAAGACGCCTCAGCAAGCTAGCAAAAAGTTAGATCTTTGGAGGTTGCCTGAGATTTTGGTTATTCATCTGAAAAGATTCTCGTACAGCCATTATTTTAAGAACAAGCTAGAAACATTTGTTGATTTTCCGATTCATCGATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

UCH

Protein Analysis

912

Amino Acids

103.45

Weight (kDa)

5.03

Isoelectric Point (pI)

40.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006941)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g20680 FvH4_6g20680 FvH4_6g20680
malus_domestica	MD00G1072700.v1.1 MD12G1043100.v1.1 MD14G1042200.v1.1
prunus_persica	Prupe.7G091700_v2.0.a1 Prupe.7G091700_v2.0.a1 Prupe.7G091700_v2.0.a1 Prupe.7G091700_v2.0.a1
pyrus_communis	pycom12g03720 pycom14g03580
rosa_chinensis	RchiOBHm_Chr3g0476581
rosa_laevigata	RLG00000001984 RLG00000023761
rosa_multiflora	Rmu_sc0008241.1_g000007 Rmu_sc0020945.1_g000001
rosa_roxburghii	Rroxscaffold_6G00405190
rosa_rugosa	Rorug03G0155400
rosa_samantha	Rh3AG206000 Rh3BG238600 Rh3CG232300 Rh3DG232200 Rh7DG310400
rosa_wichuraiana	Rw3G018760 Rw7G026340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	564
Acc36I	ACCTGC	1 cut(s)	2597
AccB1I	GGYRCC	1 cut(s)	1777
AccB7I	CCANNNNNTGG	1 cut(s)	1213
AccBSI	CCGCTC	1 cut(s)	342
AccI	GTMKAC	2 cut(s)	423, 1760
AccII	CGCG	5 cut(s)	48, 225, 233, 588, 624
AclWI	GGATC	4 cut(s)	477, 1809, 1895, 2107
AcoI	YGGCCR	2 cut(s)	28, 234
AcsI	RAATTY	3 cut(s)	544, 748, 2469
AcuI	CTGAAG	1 cut(s)	2223
AcyI	GRCGYC	5 cut(s)	279, 306, 522, 561, 2597
AfeI	AGCGCT	1 cut(s)	249
AfiI	CCNNNNNNNGG	4 cut(s)	76, 441, 1213, 1787
AflII	CTTAAG	2 cut(s)	1816, 1834
AgeI	ACCGGT	1 cut(s)	1617
AgsI	TTSAA	9 cut(s)	53, 550, 649, 944, 1294, 1378, 1508, 1701, 2476
AjiI	CACGTC	1 cut(s)	2014
AjnI	CCWGG	5 cut(s)	737, 1345, 1434, 1782, 2529
AleI	CACNNNNGTG	1 cut(s)	72
Alw21I	GWGCWC	1 cut(s)	2376
Alw26I	GTCTC	4 cut(s)	149, 796, 1469, 2025
AlwI	GGATC	4 cut(s)	477, 1809, 1895, 2107
Aor51HI	AGCGCT	1 cut(s)	249
AoxI	GGCC	6 cut(s)	28, 234, 804, 1153, 1355, 2498
ApeKI	GCWGC	2 cut(s)	653, 2330
ApoI	RAATTY	3 cut(s)	544, 748, 2469
ArsI	GACNNNNNNTTYG	2 cut(s)	278, 310
AsiGI	ACCGGT	1 cut(s)	1617
Asp700I	GAANNNNTTC	1 cut(s)	2666
AspLEI	GCGC	6 cut(s)	48, 227, 250, 351, 588, 626
AspS9I	GGNCC	8 cut(s)	79, 316, 484, 601, 804, 1729, 2415, 2561
AsuC2I	CCSGG	1 cut(s)	121
AsuHPI	GGTGA	2 cut(s)	1559, 1946
AsuNHI	GCTAGC	1 cut(s)	2609
AvaII	GGWCC	7 cut(s)	79, 316, 484, 601, 1729, 2415, 2561
AxyI	CCTNAGG	1 cut(s)	1150
BaeGI	GKGCMC	1 cut(s)	1782
BanI	GGYRCC	1 cut(s)	1777
BanII	GRGCYC	1 cut(s)	1345
BbsI	GAAGAC	2 cut(s)	60, 2346
Bbv12I	GWGCWC	1 cut(s)	2376
BbvCI	CCTCAGC	1 cut(s)	2601
BbvI	GCAGC	2 cut(s)	665, 2342
BccI	CCATC	9 cut(s)	496, 1022, 1211, 1454, 1736, 1792, 1925, 2002, 2174
BceAI	ACGGC	5 cut(s)	212, 397, 409, 650, 1741
BcgI	CGANNNNNNTGC	4 cut(s)	199, 233, 774, 808
BciT130I	CCWGG	5 cut(s)	739, 1347, 1436, 1784, 2531
BclI	TGATCA	1 cut(s)	1923
BcnI	CCSGG	1 cut(s)	121
BcoDI	GTCTC	4 cut(s)	149, 796, 1469, 2025
BfaI	CTAG	6 cut(s)	245, 1166, 1247, 1286, 2610, 2699
BfmI	CTRYAG	3 cut(s)	436, 1132, 2020
BfoI	RGCGCY	2 cut(s)	251, 352
BfrI	CTTAAG	2 cut(s)	1816, 1834
BfuAI	ACCTGC	1 cut(s)	2597
BglI	GCCNNNNNGGC	1 cut(s)	233
BglII	AGATCT	2 cut(s)	1474, 2623
BisI	GCNGC	6 cut(s)	167, 234, 525, 528, 654, 2331
BlpI	GCTNAGC	1 cut(s)	902
BlsI	GCNGC	6 cut(s)	168, 235, 526, 529, 655, 2332
BmcAI	AGTACT	1 cut(s)	2130
Bme1390I	CCNGG	6 cut(s)	121, 739, 1347, 1436, 1784, 2531
Bme18I	GGWCC	7 cut(s)	79, 316, 484, 601, 1729, 2415, 2561
BmgBI	CACGTC	1 cut(s)	2014
BmgT120I	GGNCC	8 cut(s)	79, 316, 484, 601, 804, 1729, 2415, 2561
BmiI	GGNNCC	8 cut(s)	80, 292, 317, 485, 603, 1344, 1365, 1779
BmrFI	CCNGG	6 cut(s)	121, 739, 1347, 1436, 1784, 2531
BmsI	GCATC	5 cut(s)	1743, 2136, 2149, 2212, 2242
BmtI	GCTAGC	1 cut(s)	2613
BpiI	GAAGAC	2 cut(s)	60, 2346
BplI	GAGNNNNNCTC	2 cut(s)	2485, 2517
BpmI	CTGGAG	2 cut(s)	1329, 2175
Bpu10I	CCTNAGC	3 cut(s)	1512, 1733, 2601
Bpu1102I	GCTNAGC	1 cut(s)	902
BpuEI	CTTGAG	1 cut(s)	2487
BpuMI	CCSGG	1 cut(s)	121
Bsa29I	ATCGAT	1 cut(s)	2728
BsaBI	GATNNNNATC	1 cut(s)	1479
BsaHI	GRCGYC	5 cut(s)	279, 306, 522, 561, 2597
BsaI	GGTCTC	1 cut(s)	1469
BsaJI	CCNNGG	8 cut(s)	282, 597, 738, 955, 1434, 1606, 1782, 1783
BsaWI	WCCGGW	1 cut(s)	1617
Bsc4I	CCNNNNNNNGG	4 cut(s)	76, 441, 1213, 1787
Bse118I	RCCGGY	1 cut(s)	1617
Bse1I	ACTGG	6 cut(s)	1008, 1165, 1358, 2158, 2191, 2305
Bse21I	CCTNAGG	1 cut(s)	1150
Bse3DI	GCAATG	3 cut(s)	412, 481, 2101
Bse8I	GATNNNNATC	1 cut(s)	1479
BseBI	CCWGG	5 cut(s)	739, 1347, 1436, 1784, 2531
BseCI	ATCGAT	1 cut(s)	2728
BseDI	CCNNGG	8 cut(s)	282, 597, 738, 955, 1434, 1606, 1782, 1783
BseGI	GGATG	7 cut(s)	63, 1033, 1203, 1465, 1522, 2227, 2284
BseJI	GATNNNNATC	1 cut(s)	1479
BseLI	CCNNNNNNNGG	4 cut(s)	76, 441, 1213, 1787
BseMI	GCAATG	3 cut(s)	412, 481, 2101
BseMII	CTCAG	3 cut(s)	1854, 2615, 2631
BseNI	ACTGG	6 cut(s)	1008, 1165, 1358, 2158, 2191, 2305
BseRI	GAGGAG	5 cut(s)	479, 1006, 1152, 1345, 2509
BseSI	GKGCMC	1 cut(s)	1782
BseXI	GCAGC	2 cut(s)	665, 2342
BseYI	CCCAGC	1 cut(s)	345
BsgI	GTGCAG	1 cut(s)	705
Bsh1236I	CGCG	5 cut(s)	48, 225, 233, 588, 624
BshFI	GGCC	6 cut(s)	30, 236, 806, 1155, 1357, 2500
BshNI	GGYRCC	1 cut(s)	1777
BshTI	ACCGGT	1 cut(s)	1617
BshVI	ATCGAT	1 cut(s)	2728
BsiHKAI	GWGCWC	1 cut(s)	2376
BsiSI	CCGG	3 cut(s)	121, 1618, 2465
BslFI	GGGAC	7 cut(s)	199, 329, 587, 863, 1759, 1963, 2030
BslI	CCNNNNNNNGG	4 cut(s)	76, 441, 1213, 1787
BsmAI	GTCTC	4 cut(s)	149, 796, 1469, 2025
BsmBI	CGTCTC	1 cut(s)	149
BsmFI	GGGAC	7 cut(s)	199, 329, 587, 863, 1759, 1963, 2030
BsnI	GGCC	6 cut(s)	30, 236, 806, 1155, 1357, 2500
Bso31I	GGTCTC	1 cut(s)	1469
Bsp1286I	GDGCHC	3 cut(s)	1345, 1782, 2376
Bsp1407I	TGTACA	1 cut(s)	489
Bsp143I	GATC	9 cut(s)	469, 765, 1474, 1801, 1900, 1923, 2099, 2623, 2729
Bsp1720I	GCTNAGC	1 cut(s)	902
Bsp19I	CCATGG	2 cut(s)	282, 955
BspANI	GGCC	6 cut(s)	30, 236, 806, 1155, 1357, 2500
BspCNI	CTCAG	3 cut(s)	1855, 2614, 2632
BspDI	ATCGAT	1 cut(s)	2728
BspFNI	CGCG	5 cut(s)	48, 225, 233, 588, 624
BspHI	TCATGA	1 cut(s)	879
BspLI	GGNNCC	8 cut(s)	80, 292, 317, 485, 603, 1344, 1365, 1779
BspMI	ACCTGC	1 cut(s)	2597
BspOI	GCTAGC	1 cut(s)	2613
BspPI	GGATC	4 cut(s)	477, 1809, 1895, 2107
BspQI	GCTCTTC	1 cut(s)	257
BspT107I	GGYRCC	1 cut(s)	1777
BspTI	CTTAAG	2 cut(s)	1816, 1834
BspTNI	GGTCTC	1 cut(s)	1469
BsrBI	CCGCTC	1 cut(s)	342
BsrDI	GCAATG	3 cut(s)	412, 481, 2101
BsrFI	RCCGGY	1 cut(s)	1617
BsrGI	TGTACA	1 cut(s)	489
BsrI	ACTGG	6 cut(s)	1008, 1165, 1358, 2158, 2191, 2305
BssAI	RCCGGY	1 cut(s)	1617
BssECI	CCNNGG	8 cut(s)	282, 597, 738, 955, 1434, 1606, 1782, 1783
BssMI	GATC	9 cut(s)	469, 765, 1474, 1801, 1900, 1923, 2099, 2623, 2729
BssNI	GRCGYC	5 cut(s)	279, 306, 522, 561, 2597
BssT1I	CCWWGG	4 cut(s)	282, 597, 955, 1606
Bst2UI	CCWGG	5 cut(s)	739, 1347, 1436, 1784, 2531
Bst4CI	ACNGT	7 cut(s)	290, 1199, 1692, 1729, 1771, 1777, 2024
Bst6I	CTCTTC	3 cut(s)	158, 257, 564
BstACI	GRCGYC	5 cut(s)	279, 306, 522, 561, 2597
BstAFI	CTTAAG	2 cut(s)	1816, 1834
BstAUI	TGTACA	1 cut(s)	489
BstC8I	GCNNGC	6 cut(s)	223, 1305, 1496, 1642, 2607, 2611
BstDSI	CCRYGG	2 cut(s)	282, 955
BstEII	GGTNACC	1 cut(s)	1934
BstF5I	GGATG	7 cut(s)	63, 1033, 1203, 1465, 1522, 2227, 2284
BstFNI	CGCG	5 cut(s)	48, 225, 233, 588, 624
BstH2I	RGCGCY	2 cut(s)	251, 352
BstHHI	GCGC	6 cut(s)	48, 227, 250, 351, 588, 626
BstKTI	GATC	9 cut(s)	472, 768, 1477, 1804, 1903, 1926, 2102, 2626, 2732
BstMAI	GTCTC	4 cut(s)	149, 796, 1469, 2025
BstMBI	GATC	9 cut(s)	469, 765, 1474, 1801, 1900, 1923, 2099, 2623, 2729
BstMWI	GCNNNNNNNGC	9 cut(s)	233, 348, 402, 1349, 1397, 1641, 2371, 2454, 2589
BstNI	CCWGG	5 cut(s)	739, 1347, 1436, 1784, 2531
BstNSI	RCATGY	2 cut(s)	1830, 2448
BstPI	GGTNACC	1 cut(s)	1934
BstSCI	CCNGG	6 cut(s)	119, 737, 1345, 1434, 1782, 2529
BstSFI	CTRYAG	3 cut(s)	436, 1132, 2020
BstSLI	GKGCMC	1 cut(s)	1782
BstUI	CGCG	5 cut(s)	48, 225, 233, 588, 624
BstV1I	GCAGC	2 cut(s)	665, 2342
BstV2I	GAAGAC	2 cut(s)	60, 2346
BstX2I	RGATCY	5 cut(s)	1474, 1801, 1900, 2099, 2623
BstXI	CCANNNNNNTGG	3 cut(s)	74, 89, 1412
BstYI	RGATCY	5 cut(s)	1474, 1801, 1900, 2099, 2623
Bsu15I	ATCGAT	1 cut(s)	2728
Bsu36I	CCTNAGG	1 cut(s)	1150
BsuRI	GGCC	6 cut(s)	30, 236, 806, 1155, 1357, 2500
BsuTUI	ATCGAT	1 cut(s)	2728
BtgI	CCRYGG	2 cut(s)	282, 955
BtgZI	GCGATG	2 cut(s)	1011, 1766
BtrI	CACGTC	1 cut(s)	2014
BtsCI	GGATG	7 cut(s)	63, 1033, 1203, 1465, 1522, 2227, 2284
BtsI	GCAGTG	2 cut(s)	492, 1821
BtsIMutI	CAGTG	5 cut(s)	492, 1204, 1365, 1417, 1821
BveI	ACCTGC	1 cut(s)	2597
Cac8I	GCNNGC	6 cut(s)	223, 1305, 1496, 1642, 2607, 2611
CciI	TCATGA	1 cut(s)	879
CfoI	GCGC	6 cut(s)	48, 227, 250, 351, 588, 626
Cfr10I	RCCGGY	1 cut(s)	1617
Cfr13I	GGNCC	8 cut(s)	79, 316, 484, 601, 804, 1729, 2415, 2561
ClaI	ATCGAT	1 cut(s)	2728
CseI	GACGC	4 cut(s)	287, 314, 530, 2605
CspAI	ACCGGT	1 cut(s)	1617
CspCI	CAANNNNNGTGG	4 cut(s)	1272, 1307, 1341, 1376
CviAII	CATG	9 cut(s)	72, 283, 880, 956, 1427, 1469, 1827, 2035, 2445
DpnI	GATC	9 cut(s)	471, 767, 1476, 1803, 1902, 1925, 2101, 2625, 2731
DpnII	GATC	9 cut(s)	469, 765, 1474, 1801, 1900, 1923, 2099, 2623, 2729
EaeI	YGGCCR	2 cut(s)	28, 234
Eam1104I	CTCTTC	3 cut(s)	158, 257, 564
EarI	CTCTTC	3 cut(s)	158, 257, 564
EciI	GGCGGA	2 cut(s)	317, 1803
Eco130I	CCWWGG	4 cut(s)	282, 597, 955, 1606
Eco147I	AGGCCT	2 cut(s)	1155, 2500
Eco24I	GRGCYC	1 cut(s)	1345
Eco31I	GGTCTC	1 cut(s)	1469
Eco47I	GGWCC	7 cut(s)	79, 316, 484, 601, 1729, 2415, 2561
Eco47III	AGCGCT	1 cut(s)	249
Eco57I	CTGAAG	1 cut(s)	2223
Eco81I	CCTNAGG	1 cut(s)	1150
Eco91I	GGTNACC	1 cut(s)	1934
EcoO109I	RGGNCCY	3 cut(s)	316, 484, 804
EcoO65I	GGTNACC	1 cut(s)	1934
EcoRII	CCWGG	5 cut(s)	737, 1345, 1434, 1782, 2529
EcoT14I	CCWWGG	4 cut(s)	282, 597, 955, 1606
EcoT22I	ATGCAT	1 cut(s)	2164
EcoT38I	GRGCYC	1 cut(s)	1345
ErhI	CCWWGG	4 cut(s)	282, 597, 955, 1606
Esp3I	CGTCTC	1 cut(s)	149
FaeI	CATG	9 cut(s)	75, 286, 883, 959, 1430, 1472, 1830, 2038, 2448
FalI	AAGNNNNNCTT	2 cut(s)	1287, 1319
FaqI	GGGAC	7 cut(s)	199, 329, 587, 863, 1759, 1963, 2030
FatI	CATG	9 cut(s)	71, 282, 879, 955, 1426, 1468, 1826, 2034, 2444
FauI	CCCGC	1 cut(s)	362
FbaI	TGATCA	1 cut(s)	1923
FblI	GTMKAC	2 cut(s)	423, 1760
Fnu4HI	GCNGC	6 cut(s)	167, 234, 525, 528, 654, 2331
FokI	GGATG	7 cut(s)	50, 1040, 1190, 1472, 1529, 2234, 2291
FriOI	GRGCYC	1 cut(s)	1345
Fsp4HI	GCNGC	6 cut(s)	167, 234, 525, 528, 654, 2331
FspBI	CTAG	6 cut(s)	245, 1166, 1247, 1286, 2610, 2699
GlaI	GCGC	6 cut(s)	47, 226, 249, 350, 587, 625
GluI	GCNGC	6 cut(s)	167, 234, 525, 528, 654, 2331
GsaI	CCCAGC	1 cut(s)	349
GsuI	CTGGAG	2 cut(s)	1329, 2175
HaeII	RGCGCY	2 cut(s)	251, 352
HaeIII	GGCC	6 cut(s)	30, 236, 806, 1155, 1357, 2500
HapII	CCGG	3 cut(s)	121, 1618, 2465
HgaI	GACGC	4 cut(s)	287, 314, 530, 2605
HhaI	GCGC	6 cut(s)	48, 227, 250, 351, 588, 626
Hin1I	GRCGYC	5 cut(s)	279, 306, 522, 561, 2597
Hin1II	CATG	9 cut(s)	75, 286, 883, 959, 1430, 1472, 1830, 2038, 2448
Hin6I	GCGC	6 cut(s)	46, 225, 248, 349, 586, 624
HinP1I	GCGC	6 cut(s)	46, 225, 248, 349, 586, 624
HpaII	CCGG	3 cut(s)	121, 1618, 2465
HphI	GGTGA	2 cut(s)	1559, 1946
Hpy166II	GTNNAC	5 cut(s)	82, 274, 424, 492, 1761
Hpy188III	TCNNGA	8 cut(s)	275, 880, 1532, 1921, 2122, 2504, 2519, 2733
Hpy8I	GTNNAC	5 cut(s)	82, 274, 424, 492, 1761
HpyCH4III	ACNGT	7 cut(s)	290, 1199, 1692, 1729, 1771, 1777, 2024
HpyCH4IV	ACGT	4 cut(s)	561, 614, 669, 2013
HpyF10VI	GCNNNNNNNGC	9 cut(s)	233, 348, 402, 1349, 1397, 1641, 2371, 2454, 2589
HpySE526I	ACGT	4 cut(s)	561, 614, 669, 2013
Hsp92I	GRCGYC	5 cut(s)	279, 306, 522, 561, 2597
Hsp92II	CATG	9 cut(s)	75, 286, 883, 959, 1430, 1472, 1830, 2038, 2448
HspAI	GCGC	6 cut(s)	46, 225, 248, 349, 586, 624
Ksp22I	TGATCA	1 cut(s)	1923
Kzo9I	GATC	9 cut(s)	469, 765, 1474, 1801, 1900, 1923, 2099, 2623, 2729
LguI	GCTCTTC	1 cut(s)	257
LmnI	GCTCC	7 cut(s)	144, 204, 347, 993, 1348, 1369, 1405
Lsp1109I	GCAGC	2 cut(s)	665, 2342
LweI	GCATC	5 cut(s)	1743, 2136, 2149, 2212, 2242
MaeI	CTAG	6 cut(s)	245, 1166, 1247, 1286, 2610, 2699
MaeII	ACGT	4 cut(s)	561, 614, 669, 2013
MaeIII	GTNAC	6 cut(s)	98, 1692, 1771, 1934, 1987, 2111
MalI	GATC	9 cut(s)	471, 767, 1476, 1803, 1902, 1925, 2101, 2625, 2731
MbiI	CCGCTC	1 cut(s)	342
MboI	GATC	9 cut(s)	469, 765, 1474, 1801, 1900, 1923, 2099, 2623, 2729
MflI	RGATCY	5 cut(s)	1474, 1801, 1900, 2099, 2623
MhlI	GDGCHC	3 cut(s)	1345, 1782, 2376
MlyI	GAGTC	7 cut(s)	95, 120, 945, 1025, 1577, 1885, 1982
MmeI	TCCRAC	3 cut(s)	1127, 1391, 1437
Mph1103I	ATGCAT	1 cut(s)	2164
MroXI	GAANNNNTTC	1 cut(s)	2666
MseI	TTAA	7 cut(s)	1059, 1097, 1382, 1817, 1835, 2315, 2688
MslI	CAYNNNNRTG	2 cut(s)	72, 87
MspA1I	CMGCKG	2 cut(s)	530, 922
MspCI	CTTAAG	2 cut(s)	1816, 1834
MspI	CCGG	3 cut(s)	121, 1618, 2465
MspR9I	CCNGG	6 cut(s)	121, 739, 1347, 1436, 1784, 2531
MvaI	CCWGG	5 cut(s)	739, 1347, 1436, 1784, 2531
MvnI	CGCG	5 cut(s)	48, 225, 233, 588, 624
MwoI	GCNNNNNNNGC	9 cut(s)	233, 348, 402, 1349, 1397, 1641, 2371, 2454, 2589
NciI	CCSGG	1 cut(s)	121
NcoI	CCATGG	2 cut(s)	282, 955
NdeII	GATC	9 cut(s)	469, 765, 1474, 1801, 1900, 1923, 2099, 2623, 2729
NheI	GCTAGC	1 cut(s)	2609
NlaIII	CATG	9 cut(s)	75, 286, 883, 959, 1430, 1472, 1830, 2038, 2448
NlaIV	GGNNCC	8 cut(s)	80, 292, 317, 485, 603, 1344, 1365, 1779
NmeAIII	GCCGAG	1 cut(s)	6
NmuCI	GTSAC	3 cut(s)	98, 1771, 1934
NsiI	ATGCAT	1 cut(s)	2164
NspI	RCATGY	2 cut(s)	1830, 2448
OliI	CACNNNNGTG	1 cut(s)	72
PagI	TCATGA	1 cut(s)	879
PasI	CCCWGGG	1 cut(s)	1783
PceI	AGGCCT	2 cut(s)	1155, 2500
PciSI	GCTCTTC	1 cut(s)	257
PcsI	WCGNNNNNNNCGW	8 cut(s)	225, 369, 372, 381, 387, 516, 564, 1885
PdmI	GAANNNNTTC	1 cut(s)	2666
PflFI	GACNNNGTC	1 cut(s)	563
PflMI	CCANNNNNTGG	1 cut(s)	1213
PinAI	ACCGGT	1 cut(s)	1617
PkrI	GCNGC	6 cut(s)	168, 235, 526, 529, 655, 2332
PleI	GAGTC	7 cut(s)	95, 120, 945, 1024, 1577, 1884, 1981
PpsI	GAGTC	7 cut(s)	95, 120, 945, 1024, 1577, 1884, 1981
PpuMI	RGGWCCY	2 cut(s)	316, 484
Psp5II	RGGWCCY	2 cut(s)	316, 484
Psp6I	CCWGG	5 cut(s)	737, 1345, 1434, 1782, 2529
PspEI	GGTNACC	1 cut(s)	1934
PspFI	CCCAGC	1 cut(s)	345
PspGI	CCWGG	5 cut(s)	737, 1345, 1434, 1782, 2529
PspN4I	GGNNCC	8 cut(s)	80, 292, 317, 485, 603, 1344, 1365, 1779
PspPI	GGNCC	8 cut(s)	79, 316, 484, 601, 804, 1729, 2415, 2561
PspPPI	RGGWCCY	2 cut(s)	316, 484
PsuI	RGATCY	5 cut(s)	1474, 1801, 1900, 2099, 2623
PsyI	GACNNNGTC	1 cut(s)	563
PvuII	CAGCTG	1 cut(s)	922
RseI	CAYNNNNRTG	2 cut(s)	72, 87
SapI	GCTCTTC	1 cut(s)	257
SaqAI	TTAA	7 cut(s)	1059, 1097, 1382, 1817, 1835, 2315, 2688
SatI	GCNGC	6 cut(s)	167, 234, 525, 528, 654, 2331
Sau3AI	GATC	9 cut(s)	469, 765, 1474, 1801, 1900, 1923, 2099, 2623, 2729
Sau96I	GGNCC	8 cut(s)	79, 316, 484, 601, 804, 1729, 2415, 2561
ScaI	AGTACT	1 cut(s)	2130
SchI	GAGTC	7 cut(s)	95, 120, 945, 1025, 1577, 1885, 1982
ScrFI	CCNGG	6 cut(s)	121, 739, 1347, 1436, 1784, 2531
SduI	GDGCHC	3 cut(s)	1345, 1782, 2376
SfaNI	GCATC	5 cut(s)	1743, 2136, 2149, 2212, 2242
SfcI	CTRYAG	3 cut(s)	436, 1132, 2020
SinI	GGWCC	7 cut(s)	79, 316, 484, 601, 1729, 2415, 2561
SmiMI	CAYNNNNRTG	2 cut(s)	72, 87
SmlI	CTYRAG	3 cut(s)	1816, 1834, 2502
SmoI	CTYRAG	3 cut(s)	1816, 1834, 2502
SseBI	AGGCCT	2 cut(s)	1155, 2500
SspI	AATATT	3 cut(s)	814, 910, 1556
SspMI	CTAG	6 cut(s)	245, 1166, 1247, 1286, 2610, 2699
StuI	AGGCCT	2 cut(s)	1155, 2500
StyD4I	CCNGG	6 cut(s)	119, 737, 1345, 1434, 1782, 2529
StyI	CCWWGG	4 cut(s)	282, 597, 955, 1606
TaaI	ACNGT	7 cut(s)	290, 1199, 1692, 1729, 1771, 1777, 2024
TaiI	ACGT	4 cut(s)	564, 617, 672, 2016
TaqI	TCGA	5 cut(s)	321, 567, 1685, 2337, 2728
TatI	WGTACW	3 cut(s)	489, 538, 2128
TauI	GCSGC	4 cut(s)	169, 236, 527, 530
Tru1I	TTAA	7 cut(s)	1059, 1097, 1382, 1817, 1835, 2315, 2688
Tru9I	TTAA	7 cut(s)	1059, 1097, 1382, 1817, 1835, 2315, 2688
TscAI	CASTG	5 cut(s)	499, 1204, 1365, 1417, 1828
TseFI	GTSAC	3 cut(s)	98, 1771, 1934
TseI	GCWGC	2 cut(s)	653, 2330
Tsp45I	GTSAC	3 cut(s)	98, 1771, 1934
TspGWI	ACGGA	3 cut(s)	131, 476, 825
TspRI	CASTG	5 cut(s)	499, 1204, 1365, 1417, 1828
Tth111I	GACNNNGTC	1 cut(s)	563
Van91I	CCANNNNNTGG	1 cut(s)	1213
Vha464I	CTTAAG	2 cut(s)	1816, 1834
VpaK11BI	GGWCC	7 cut(s)	79, 316, 484, 601, 1729, 2415, 2561
XapI	RAATTY	3 cut(s)	544, 748, 2469
XceI	RCATGY	2 cut(s)	1830, 2448
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1210, 2571
XmiI	GTMKAC	2 cut(s)	423, 1760
XmnI	GAANNNNTTC	1 cut(s)	2666
XspI	CTAG	6 cut(s)	245, 1166, 1247, 1286, 2610, 2699
ZraI	GACGTC	1 cut(s)	562
ZrmI	AGTACT	1 cut(s)	2130
Zsp2I	ATGCAT	1 cut(s)	2164

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.