Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0006941

Physical Location & Seq

Genomic Coordinates Reverse (-)

33410964 .. 33418567

Gene Structure 7604 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G026340.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGACCCGACTCTCGGAAAAGCTCCGTCTGTCTCTCTTCCTTCTTCTGTACGATCCAACCCGGTTTCTCTCTCCTCCAAAGCAGCTCTTGGCCACTCTCTCAGTCTTCCGTACTTGTCTGGATTCCATTACATTTGCACTCTCCAATGCGATGAATATGGTAAGCAACATTTTCAGCATTTTTTCCTGTAATAATAGTTGGCGGAGCTTAAAGGGCAGATCTGATCAGAGCTTTCTTTGGCATTTATTAGTCTTCTCTTCTTGTAGGCATTATGATTTTAATACAGCAGCAATGGGTAATGTGAGCTTCTTTGGTGACGAAGAGCTTTTAAAGGATGTCTTTTCTTTACAAATTAGGCTCTTTGTTTCCTGGGAAACAAATTCATTGGTTGTAAAGATCAGCCAAAAGGATAATGCGGTTGATTCTTTCAAGAGAGCCTGCATTATTGTCAGTTCAGAGCCCAAGCCAATTGTCCTGGAATTGCATCTTCATGGATTTTCAGAGGTCAGAGGTTGGAGAAGTGATGACATGGCTGAAAACCACTTCAGTATTGATGGTTGTATTAGTGGTGGCTCTTCTAAAATGAATGGGAACATTTACTACGTCAATCCCTACTTAAACTCAAGCAACTCCTGGCGAAGTGCTGTTATGTATGGAGGAGTTGGTTCTTTAGGCTTAACTGGTATAAAGAATCTTGGGAATACTTGTTTTATGAACAGTGCAATCCAATGTTTGGTGCACACTCCAAAGCTTGTTGACTATTGTCTAGGAGATTACCGGAAGGACATGAACTATCAGAATCCATTGGGAATGAAAGGAGAGCTTGCTTTTGCATTTGGAGAATTATTGAGGAGATTTTGGGCTCCAGGTGCAAGGCCAGTGGCTCCAAGAATGTTCAAGCAAAAACTTGCCAGTTTTGCTCCTCAATTTAGTGGCTATAATCAATTGATTCCCAGGTTAGAACTCCTTGCTTTTTTGCTGGATGGTCTCCATGAAGATCTAAATCGTGTGAAATGCAAGCCATATTTTGAAGCTAAAGATGCAGAGGGTCGTCCAGATGAAGAAGTGGTGGAAGAATATTGGCGGAATCACCTGGCTCGCAATGATTCCATTATTGTTAATGCATACCAGGGTCAATACCGGTCAAAATTGGTTTGCCCCAATTGCAACAAGGTGTCCATTACATTTGACCCATTTATGTATCTATCACTGCCATTACCTTCTACTACAATGCGGAGTATGACTTTGACGGTTTTAAGCACAGATGGTGCTGCGTTGCCTACTACATTTACTGTAACAGTGCCAAAGAGTGGGAAGCTCGTGGATCTTACTGAAGCCTTAAGTATTGCCTGTTCTCTAAGAGATGATGAAACCCTGTTGGTGGCTGAGATATACCAGTGTCTCATATTTCGTTTATTGGAGGATCCATCTGATTCATTAGCCTTTGTTAGAGACGCTGACAAACTGGTTGCTTATCTCTTACCAAAAGATTTTGAGCGATCGCACTTGGTTGTGTTTCTTCATCAGGAGAAGGGAAAGTATTACTATAATCAAGACACAATTGGTATCCCACTTTTAGCAAGGGTGTCTGATCCTTGTTATGGATCTGATATTCGCAACGAATTCCTAAATAATTTAAATCCATTCTTGAAGCCTGATGGAGATATATCAGATGTTTTTGATGATGATTCTGGAAACCGTGCTAATGAAGACTCTAACAAGGAGGATGACAGTAGTCCTACAGTTTGGGATAATGATTCTGACACAGACAGGGGAACAATGGGTGAAGCGCTTAACCAGTTATCCAGTCGATACATGTTGTACGCAATCAGTAATCACTATGGTGGCTTGGGTGGTGGTCACTATACGGCATTTGTTCATCTCGGTAAGGGTTCAGGGTATGAGTTTGATGATGACAGAGTTTCTGCTGTTAATGAGGAGAGGATTAAGACTTCGGCAGCATATGTTCTTTTCTACCGTAGAGTACCAGATGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

UCH

Protein Analysis

665

Amino Acids

74.94

Weight (kDa)

5.57

Isoelectric Point (pI)

38.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ubiquitin_UBP8	PF25242	118 - 157	8e-15	UBP8-like, ubiquitin-like domain
UCH	PF00443	227 - 659	1.2e-45	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006941)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g20680 FvH4_6g20680 FvH4_6g20680
malus_domestica	MD00G1072700.v1.1 MD12G1043100.v1.1 MD14G1042200.v1.1
prunus_persica	Prupe.7G091700_v2.0.a1 Prupe.7G091700_v2.0.a1 Prupe.7G091700_v2.0.a1 Prupe.7G091700_v2.0.a1
pyrus_communis	pycom12g03720 pycom14g03580
rosa_chinensis	RchiOBHm_Chr3g0476581
rosa_laevigata	RLG00000001984 RLG00000023761
rosa_multiflora	Rmu_sc0008241.1_g000007 Rmu_sc0020945.1_g000001
rosa_roxburghii	Rroxscaffold_6G00405190
rosa_rugosa	Rorug03G0155400
rosa_samantha	Rh3AG206000 Rh3BG238600 Rh3CG232300 Rh3DG232200 Rh7DG310400
rosa_wichuraiana	Rw3G018760 Rw7G026340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	733, 1310
AciI	CCGC	4 cut(s)	202, 416, 1084, 1234
AclWI	GGATC	6 cut(s)	47, 1332, 1418, 1431, 1586, 1612
AcoI	YGGCCR	1 cut(s)	90
AcsI	RAATTY	2 cut(s)	379, 1622
AcuI	CTGAAG	2 cut(s)	529, 1353
AfaI	GTAC	4 cut(s)	50, 112, 1823, 1986
AfeI	AGCGCT	1 cut(s)	1791
AfiI	CCNNNNNNNGG	5 cut(s)	13, 733, 1310, 1381, 1601
AflII	CTTAAG	1 cut(s)	1339
AflIII	ACRYGT	1 cut(s)	1815
AgeI	ACCGGT	1 cut(s)	1140
AgsI	TTSAA	4 cut(s)	430, 898, 1031, 1651
AjnI	CCWGG	7 cut(s)	368, 474, 632, 865, 953, 1092, 1128
AleI	CACNNNNGTG	1 cut(s)	1842
Alw21I	GWGCWC	1 cut(s)	741
Alw26I	GTCTC	4 cut(s)	36, 992, 1406, 1446
Alw44I	GTGCAC	1 cut(s)	737
AlwI	GGATC	6 cut(s)	47, 1332, 1418, 1431, 1586, 1612
Aor51HI	AGCGCT	1 cut(s)	1791
AoxI	GGCC	2 cut(s)	90, 875
ApaLI	GTGCAC	1 cut(s)	737
ApeKI	GCWGC	4 cut(s)	82, 287, 1271, 1958
ApoI	RAATTY	2 cut(s)	379, 1622
AsiGI	ACCGGT	1 cut(s)	1140
AsiSI	GCGATCGC	1 cut(s)	1502
AspLEI	GCGC	1 cut(s)	1792
AsuC2I	CCSGG	1 cut(s)	61
AsuHPI	GGTGA	3 cut(s)	326, 1082, 1796
BaeGI	GKGCMC	1 cut(s)	741
BalI	TGGCCA	1 cut(s)	92
BamHI	GGATCC	1 cut(s)	1423
BanII	GRGCYC	2 cut(s)	462, 865
BauI	CACGAG	1 cut(s)	1319
BbsI	GAAGAC	3 cut(s)	97, 244, 1716
Bbv12I	GWGCWC	1 cut(s)	741
BbvI	GCAGC	4 cut(s)	94, 299, 1258, 1970
BccI	CCATC	5 cut(s)	548, 977, 1259, 1435, 1652
BceAI	ACGGC	1 cut(s)	1884
BciT130I	CCWGG	7 cut(s)	370, 476, 634, 867, 955, 1094, 1130
BciVI	GTATCC	1 cut(s)	1577
BclI	TGATCA	1 cut(s)	223
BcnI	CCSGG	1 cut(s)	61
BcoDI	GTCTC	4 cut(s)	36, 992, 1406, 1446
BfaI	CTAG	1 cut(s)	767
BfmI	CTRYAG	1 cut(s)	1740
BfoI	RGCGCY	1 cut(s)	1793
BfrI	CTTAAG	1 cut(s)	1339
BfuI	GTATCC	1 cut(s)	1577
BglII	AGATCT	2 cut(s)	218, 997
BisI	GCNGC	4 cut(s)	83, 288, 1272, 1959
BlsI	GCNGC	4 cut(s)	84, 289, 1273, 1960
Bme1390I	CCNGG	8 cut(s)	61, 370, 476, 634, 867, 955, 1094, 1130
BmiI	GGNNCC	3 cut(s)	864, 885, 1425
BmrFI	CCNGG	8 cut(s)	61, 370, 476, 634, 867, 955, 1094, 1130
BmsI	GCATC	2 cut(s)	493, 1030
BoxI	GACNNNNGTC	2 cut(s)	762, 1734
BpiI	GAAGAC	3 cut(s)	97, 244, 1716
BpmI	CTGGAG	1 cut(s)	849
BpuEI	CTTGAG	1 cut(s)	607
BpuMI	CCSGG	1 cut(s)	61
BsaBI	GATNNNNATC	1 cut(s)	1002
BsaI	GGTCTC	1 cut(s)	992
BsaJI	CCNNGG	3 cut(s)	369, 953, 1129
BsaWI	WCCGGW	2 cut(s)	777, 1140
Bsc4I	CCNNNNNNNGG	5 cut(s)	13, 733, 1310, 1381, 1601
Bse118I	RCCGGY	1 cut(s)	1140
Bse1I	ACTGG	7 cut(s)	685, 878, 912, 1396, 1470, 1798, 1806
Bse3DI	GCAATG	2 cut(s)	297, 1108
Bse8I	GATNNNNATC	1 cut(s)	1002
BseBI	CCWGG	7 cut(s)	370, 476, 634, 867, 955, 1094, 1130
BseDI	CCNNGG	3 cut(s)	369, 953, 1129
BseGI	GGATG	3 cut(s)	340, 988, 1732
BseJI	GATNNNNATC	1 cut(s)	1002
BseLI	CCNNNNNNNGG	5 cut(s)	13, 733, 1310, 1381, 1601
BseMI	GCAATG	2 cut(s)	297, 1108
BseMII	CTCAG	2 cut(s)	114, 1377
BseNI	ACTGG	7 cut(s)	685, 878, 912, 1396, 1470, 1798, 1806
BseRI	GAGGAG	5 cut(s)	63, 672, 865, 912, 1952
BseSI	GKGCMC	1 cut(s)	741
BseXI	GCAGC	4 cut(s)	94, 299, 1258, 1970
Bsh1285I	CGRYCG	1 cut(s)	1502
BshFI	GGCC	2 cut(s)	92, 877
BshTI	ACCGGT	1 cut(s)	1140
BsiEI	CGRYCG	1 cut(s)	1502
BsiHKAI	GWGCWC	1 cut(s)	741
BsiSI	CCGG	3 cut(s)	61, 778, 1141
BslI	CCNNNNNNNGG	5 cut(s)	13, 733, 1310, 1381, 1601
BsmAI	GTCTC	4 cut(s)	36, 992, 1406, 1446
BsmBI	CGTCTC	1 cut(s)	1446
BsnI	GGCC	2 cut(s)	92, 877
Bso31I	GGTCTC	1 cut(s)	992
Bsp1286I	GDGCHC	3 cut(s)	462, 741, 865
BspACI	CCGC	4 cut(s)	202, 416, 1084, 1234
BspANI	GGCC	2 cut(s)	92, 877
BspCNI	CTCAG	2 cut(s)	113, 1378
BspLI	GGNNCC	3 cut(s)	864, 885, 1425
BspPI	GGATC	6 cut(s)	47, 1332, 1418, 1431, 1586, 1612
BspQI	GCTCTTC	2 cut(s)	315, 580
BspTI	CTTAAG	1 cut(s)	1339
BspTNI	GGTCTC	1 cut(s)	992
BsrDI	GCAATG	2 cut(s)	297, 1108
BsrFI	RCCGGY	1 cut(s)	1140
BsrI	ACTGG	7 cut(s)	685, 878, 912, 1396, 1470, 1798, 1806
BssAI	RCCGGY	1 cut(s)	1140
BssECI	CCNNGG	3 cut(s)	369, 953, 1129
BssSI	CACGAG	1 cut(s)	1319
Bst2BI	CACGAG	1 cut(s)	1319
Bst2UI	CCWGG	7 cut(s)	370, 476, 634, 867, 955, 1094, 1130
Bst4CI	ACNGT	8 cut(s)	719, 1252, 1294, 1300, 1700, 1733, 1744, 1979
Bst6I	CTCTTC	4 cut(s)	41, 262, 315, 580
BstAFI	CTTAAG	1 cut(s)	1339
BstC8I	GCNNGC	4 cut(s)	439, 825, 1019, 1099
BstDEI	CTNAG	3 cut(s)	100, 1358, 1386
BstF5I	GGATG	3 cut(s)	340, 988, 1732
BstH2I	RGCGCY	1 cut(s)	1793
BstHHI	GCGC	1 cut(s)	1792
BstMAI	GTCTC	4 cut(s)	36, 992, 1406, 1446
BstMCI	CGRYCG	1 cut(s)	1502
BstMWI	GCNNNNNNNGC	5 cut(s)	213, 869, 917, 1040, 1164
BstNI	CCWGG	7 cut(s)	370, 476, 634, 867, 955, 1094, 1130
BstNSI	RCATGY	1 cut(s)	1819
BstPAI	GACNNNNGTC	2 cut(s)	762, 1734
BstSCI	CCNGG	8 cut(s)	59, 368, 474, 632, 865, 953, 1092, 1128
BstSFI	CTRYAG	1 cut(s)	1740
BstSLI	GKGCMC	1 cut(s)	741
BstV1I	GCAGC	4 cut(s)	94, 299, 1258, 1970
BstV2I	GAAGAC	3 cut(s)	97, 244, 1716
BstX2I	RGATCY	5 cut(s)	218, 997, 1324, 1423, 1604
BstYI	RGATCY	5 cut(s)	218, 997, 1324, 1423, 1604
BsuI	GTATCC	1 cut(s)	1577
BsuRI	GGCC	2 cut(s)	92, 877
BtgZI	GCGATG	1 cut(s)	164
BtsCI	GGATG	3 cut(s)	340, 988, 1732
BtsI	GCAGTG	1 cut(s)	1208
BtsIMutI	CAGTG	5 cut(s)	724, 885, 1208, 1305, 1403
Cac8I	GCNNGC	4 cut(s)	439, 825, 1019, 1099
CfoI	GCGC	1 cut(s)	1792
Cfr10I	RCCGGY	1 cut(s)	1140
CseI	GACGC	1 cut(s)	1463
Csp6I	GTAC	4 cut(s)	49, 111, 1822, 1985
CspAI	ACCGGT	1 cut(s)	1140
CspCI	CAANNNNNGTGG	2 cut(s)	861, 896
CviAII	CATG	5 cut(s)	491, 529, 787, 992, 1816
CviQI	GTAC	4 cut(s)	49, 111, 1822, 1985
DdeI	CTNAG	3 cut(s)	100, 1358, 1386
DraI	TTTAAA	2 cut(s)	330, 1638
EaeI	YGGCCR	1 cut(s)	90
Eam1104I	CTCTTC	4 cut(s)	41, 262, 315, 580
EarI	CTCTTC	4 cut(s)	41, 262, 315, 580
EciI	GGCGGA	2 cut(s)	217, 1099
Eco24I	GRGCYC	2 cut(s)	462, 865
Eco31I	GGTCTC	1 cut(s)	992
Eco47III	AGCGCT	1 cut(s)	1791
Eco57I	CTGAAG	2 cut(s)	529, 1353
EcoRI	GAATTC	1 cut(s)	1622
EcoRII	CCWGG	7 cut(s)	368, 474, 632, 865, 953, 1092, 1128
EcoT22I	ATGCAT	1 cut(s)	1126
EcoT38I	GRGCYC	2 cut(s)	462, 865
Esp3I	CGTCTC	1 cut(s)	1446
FaeI	CATG	5 cut(s)	494, 532, 790, 995, 1819
FalI	AAGNNNNNCTT	6 cut(s)	71, 103, 323, 355, 807, 839
FatI	CATG	5 cut(s)	490, 528, 786, 991, 1815
FauNDI	CATATG	1 cut(s)	1963
FbaI	TGATCA	1 cut(s)	223
Fnu4HI	GCNGC	4 cut(s)	83, 288, 1272, 1959
FokI	GGATG	3 cut(s)	347, 995, 1739
FriOI	GRGCYC	2 cut(s)	462, 865
Fsp4HI	GCNGC	4 cut(s)	83, 288, 1272, 1959
FspBI	CTAG	1 cut(s)	767
GlaI	GCGC	1 cut(s)	1791
GluI	GCNGC	4 cut(s)	83, 288, 1272, 1959
GsuI	CTGGAG	1 cut(s)	849
HaeII	RGCGCY	1 cut(s)	1793
HaeIII	GGCC	2 cut(s)	92, 877
HapII	CCGG	3 cut(s)	61, 778, 1141
HgaI	GACGC	1 cut(s)	1463
HhaI	GCGC	1 cut(s)	1792
Hin1II	CATG	5 cut(s)	494, 532, 790, 995, 1819
Hin6I	GCGC	1 cut(s)	1790
HinP1I	GCGC	1 cut(s)	1790
HincII	GTYRAC	1 cut(s)	757
HindII	GTYRAC	1 cut(s)	757
HindIII	AAGCTT	1 cut(s)	749
HpaII	CCGG	3 cut(s)	61, 778, 1141
HphI	GGTGA	3 cut(s)	326, 1082, 1796
Hpy166II	GTNNAC	2 cut(s)	739, 757
Hpy188III	TCNNGA	7 cut(s)	119, 430, 1055, 1526, 1553, 1648, 1692
Hpy8I	GTNNAC	2 cut(s)	739, 757
HpyAV	CCTTC	4 cut(s)	50, 775, 1230, 1525
HpyCH4III	ACNGT	8 cut(s)	719, 1252, 1294, 1300, 1700, 1733, 1744, 1979
HpyCH4IV	ACGT	1 cut(s)	603
HpyF10VI	GCNNNNNNNGC	5 cut(s)	213, 869, 917, 1040, 1164
HpyF3I	CTNAG	3 cut(s)	100, 1358, 1386
HpySE526I	ACGT	1 cut(s)	603
Hsp92II	CATG	5 cut(s)	494, 532, 790, 995, 1819
HspAI	GCGC	1 cut(s)	1790
Ksp22I	TGATCA	1 cut(s)	223
LguI	GCTCTTC	2 cut(s)	315, 580
LmnI	GCTCC	5 cut(s)	27, 204, 868, 889, 925
Lsp1109I	GCAGC	4 cut(s)	94, 299, 1258, 1970
LweI	GCATC	2 cut(s)	493, 1030
MaeI	CTAG	1 cut(s)	767
MaeII	ACGT	1 cut(s)	603
MaeIII	GTNAC	3 cut(s)	314, 1294, 1859
MfeI	CAATTG	4 cut(s)	468, 944, 1162, 1560
MflI	RGATCY	5 cut(s)	218, 997, 1324, 1423, 1604
MhlI	GDGCHC	3 cut(s)	462, 741, 865
MlsI	TGGCCA	1 cut(s)	92
MluNI	TGGCCA	1 cut(s)	92
MlyI	GAGTC	2 cut(s)	3, 1706
MmeI	TCCRAC	2 cut(s)	80, 494
Mox20I	TGGCCA	1 cut(s)	92
Mph1103I	ATGCAT	1 cut(s)	1126
MscI	TGGCCA	1 cut(s)	92
MslI	CAYNNNNRTG	2 cut(s)	489, 1842
Msp20I	TGGCCA	1 cut(s)	92
MspCI	CTTAAG	1 cut(s)	1339
MspI	CCGG	3 cut(s)	61, 778, 1141
MspR9I	CCNGG	8 cut(s)	61, 370, 476, 634, 867, 955, 1094, 1130
MunI	CAATTG	4 cut(s)	468, 944, 1162, 1560
MvaI	CCWGG	7 cut(s)	370, 476, 634, 867, 955, 1094, 1130
MwoI	GCNNNNNNNGC	5 cut(s)	213, 869, 917, 1040, 1164
NciI	CCSGG	1 cut(s)	61
NdeI	CATATG	1 cut(s)	1963
NlaIII	CATG	5 cut(s)	494, 532, 790, 995, 1819
NlaIV	GGNNCC	3 cut(s)	864, 885, 1425
NmuCI	GTSAC	2 cut(s)	314, 1859
NsiI	ATGCAT	1 cut(s)	1126
NspI	RCATGY	1 cut(s)	1819
OliI	CACNNNNGTG	1 cut(s)	1842
PciI	ACATGT	1 cut(s)	1815
PciSI	GCTCTTC	2 cut(s)	315, 580
PflMI	CCANNNNNTGG	2 cut(s)	733, 1310
PfoI	TCCNGGA	1 cut(s)	474
PinAI	ACCGGT	1 cut(s)	1140
PkrI	GCNGC	4 cut(s)	84, 289, 1273, 1960
Ple19I	CGATCG	1 cut(s)	1502
PleI	GAGTC	2 cut(s)	3, 1706
PpsI	GAGTC	2 cut(s)	3, 1706
PscI	ACATGT	1 cut(s)	1815
PshAI	GACNNNNGTC	2 cut(s)	762, 1734
Psp6I	CCWGG	7 cut(s)	368, 474, 632, 865, 953, 1092, 1128
PspGI	CCWGG	7 cut(s)	368, 474, 632, 865, 953, 1092, 1128
PspN4I	GGNNCC	3 cut(s)	864, 885, 1425
PsrI	GAACNNNNNNTAC	4 cut(s)	584, 616, 1336, 1368
PsuI	RGATCY	5 cut(s)	218, 997, 1324, 1423, 1604
PvuI	CGATCG	1 cut(s)	1502
RgaI	GCGATCGC	1 cut(s)	1502
RsaI	GTAC	4 cut(s)	50, 112, 1823, 1986
RsaNI	GTAC	4 cut(s)	49, 111, 1822, 1985
RseI	CAYNNNNRTG	2 cut(s)	489, 1842
SapI	GCTCTTC	2 cut(s)	315, 580
SatI	GCNGC	4 cut(s)	83, 288, 1272, 1959
SchI	GAGTC	2 cut(s)	3, 1706
ScrFI	CCNGG	8 cut(s)	61, 370, 476, 634, 867, 955, 1094, 1130
SduI	GDGCHC	3 cut(s)	462, 741, 865
SfaAI	GCGATCGC	1 cut(s)	1502
SfaNI	GCATC	2 cut(s)	493, 1030
SfcI	CTRYAG	1 cut(s)	1740
SgfI	GCGATCGC	1 cut(s)	1502
SmiI	ATTTAAAT	1 cut(s)	1638
SmiMI	CAYNNNNRTG	2 cut(s)	489, 1842
SmlI	CTYRAG	2 cut(s)	622, 1339
SmoI	CTYRAG	2 cut(s)	622, 1339
SsiI	CCGC	4 cut(s)	202, 416, 1084, 1234
SspI	AATATT	1 cut(s)	1079
SspMI	CTAG	1 cut(s)	767
StyD4I	CCNGG	8 cut(s)	59, 368, 474, 632, 865, 953, 1092, 1128
SwaI	ATTTAAAT	1 cut(s)	1638
TaaI	ACNGT	8 cut(s)	719, 1252, 1294, 1300, 1700, 1733, 1744, 1979
TaiI	ACGT	1 cut(s)	606
TaqI	TCGA	1 cut(s)	1810
TscAI	CASTG	5 cut(s)	724, 885, 1215, 1305, 1403
TseFI	GTSAC	2 cut(s)	314, 1859
TseI	GCWGC	4 cut(s)	82, 287, 1271, 1958
Tsp45I	GTSAC	2 cut(s)	314, 1859
TspGWI	ACGGA	2 cut(s)	14, 98
TspRI	CASTG	5 cut(s)	724, 885, 1215, 1305, 1403
Van91I	CCANNNNNTGG	2 cut(s)	733, 1310
Vha464I	CTTAAG	1 cut(s)	1339
VneI	GTGCAC	1 cut(s)	737
XapI	RAATTY	2 cut(s)	379, 1622
XceI	RCATGY	1 cut(s)	1819
XspI	CTAG	1 cut(s)	767
Zsp2I	ATGCAT	1 cut(s)	1126

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.