Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0003028

Physical Location & Seq

Genomic Coordinates Reverse (-)

6569536 .. 6572373

Gene Structure 2838 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g09860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1767 bp

ATGCAACCCCAAGATTTTGAGCAAGTCATCAGCCCGGTCTCTGTTGCACACTTCTCACAGTACAAACTGATTAGGTTACTACTTAAGCAGCTTGAAAATCTCAGCTTCAAGTTCTGTACAACTGACGGGTTGGAAGGCCTCAACCATGGAACCTTTCAGGAAAAGCAACTATTAATGGGGCATGAGTGTGTTTCCATCAAAGCGAGTGAAGATTTTGTTTCTGTGACTGCATCTTTTCTCAAGGATGGGAAGCGTATGGAAAGGAATATCAGATGTAATATACTTGTTGGTACAGATGGAGCTGGAAGTACTGTACGTAAGCTGGCTGGAGTGGATATGAGAGGTGAAAGGGACTTGCAGAAGCTTGTGAGTGTCCATTTCTTGAGCAAAGTTCTTGGGAAGTATTTACTCAGTGAGAGACCTGGCATGCTGTTTTTCATCTTCAATACTGAAGCTATAGGGGTCCTTGTTGCTCATGATCTCGAGCAAGGGGAATTTGTATTACAGATTCCGTTTTATCCACCTCAGCAAAACCTTGAAGATTTCAGTCCCCAGATATGTGAGCAAATAATCTTCAAGTTGGTTGGTCGAGAGCTAGGAGACATAAATGTGATTGACATAAAACCATGGGTTATGCATGCTGAAGTTGCGGAGAAGTTTCTAAGTTGTGGCAACCGAATAATACTTGCTGGCGATGCTGCTCATCGGTTCCCTCCTGCCGGGGGGTTTGGAATGAATACTGGAATTCAGGACTCTCATAATCTTGCATGGAAAATAGCTTCGGTAGTAAAGGGTATTGCACCGTCTTCAATACTTAATTCTTATGAAACAGAACGTAGGCCGATTGCCGTTTTCAATACAGAACTTAGTATTGAGAACTTCAAAGCAGCCATGGCTGTTCCTGCTGCACTTGGTCTTGATCCAACTGTTGCAAACTCAGTACATCGCGTCATAAATGAGGGGGTTGGTTCCATTTTACCATCTGAATTACAGAGGGCCATATTGGATGGAATTTTCACGATAGGTCGTGCCCAGCTATCGGAATCTCTTTTGAATGAAAACAATCCACTTGGGTCGTCAAGGCTTGCTAATCTAAGGCGCATATTTGAAGAAGGAAAGAGCCTCCAACTCCAGTTCCCGGCAGAAGATCTTGGTTTTAGGTATCTAGAAGGTGCACTTATCCCTGATAGTGATGGTGGAATGAGTGCTCCAGAAGGACCTACTGGTCGCCGGAGGGACTATGTTCCTTCTGTGGTTCCAGGTGCAAGGCTCCCCCACATGAACGTGAGGATATTGTCAGATACCTCAAGTGAGGTTACTATTTCTACACTGGACCTTATACCTGGAGACAAGCTCGAGTTTCTCCTCATTATATCGCCAACAGAGCCGTCTTACCGTCTTGCTCATGCTGCATTCAAAGTGGCCGAGGAATTAAAAGTTTCTGCAAGGGTGTGTGTGTTGTGGCCTGCCGGCAGTGTTAAAGGAGTCGAAGTAAAAAGTAAGGCATCATTGGCACCCTGGGAGAATTACATTGACCACGAGAATTACATTGACCTCGTGGAAGTTAAAAAGTCACCGAATTCGTCATCGTGGTGGGATATCTGCCAAATGACTGACAAAGGAGCCATCTTAGTTCGACCGGATGAGCATGTTGCTTGGCGTGTGAAGTCAGGGGTTGTCCGTGACCCTATAACGGAAATGAGAAGGGTATTCTCGGCTACTCTCGGCGTAAAACCACATACTAAAGATCAAGAAACTGACACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_3

Protein Analysis

589

Amino Acids

64.98

Weight (kDa)

5.85

Isoelectric Point (pI)

41.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	56 - 283	3.3e-46	FAD binding domain
Rng_hyd_C	PF21274	503 - 571	6.1e-06	Aromatic-ring hydroxylase, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003028)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24340
fragaria_vesca	FvH4_4g24220 FvH4_4g24220 FvH4_4g24220 FvH4_4g24220 FvH4_4g24220 FvH4_4g24220 FvH4_4g24220 FvH4_4g24220 FvH4_4g24220 FvH4_4g24220
malus_domestica	MD13G1113200.v1.1 MD16G1112300.v1.1
prunus_persica	Prupe.1G232900_v2.0.a1
pyrus_communis	pycom13g09860
rosa_chinensis	RchiOBHm_Chr4g0431061
rosa_laevigata	RLG00000006928 RLG00000016399
rosa_multiflora	Rmu_co8265599.1_g000001 Rmu_sc0003592.1_g000008 Rmu_sc0010203.1_g000008 Rmu_sc0041255.1_g000001 Rmu_sc0043112.1_g000001
rosa_roxburghii	Rroxscaffold_2G00114870 Rroxscaffold_2G00148110 Rroxscaffold_5G00372680
rosa_rugosa	Rorug02G0035800 Rorug02G0035800 Rorug02G0035900 Rorug02G0035900 Rorug04G0247900
rosa_samantha	Rh2DG080900 Rh2DG081100 Rh4AG304600 Rh4BG311800 Rh4CG328100 Rh4DG308300
rosa_wichuraiana	Rw4G026450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1224
AccB1I	GGYRCC	1 cut(s)	1513
AccII	CGCG	1 cut(s)	948
AciI	CCGC	1 cut(s)	650
AclWI	GGATC	1 cut(s)	914
AcoI	YGGCCR	1 cut(s)	1422
AcsI	RAATTY	4 cut(s)	494, 744, 1011, 1579
AcuI	CTGAAG	2 cut(s)	471, 663
AfaI	GTAC	6 cut(s)	62, 118, 292, 310, 315, 942
AfiI	CCNNNNNNNGG	5 cut(s)	719, 722, 1039, 1138, 1693
AflII	CTTAAG	1 cut(s)	83
AjnI	CCWGG	4 cut(s)	421, 1258, 1342, 1517
Alw21I	GWGCWC	2 cut(s)	1177, 1210
Alw26I	GTCTC	4 cut(s)	43, 412, 594, 1341
Alw44I	GTGCAC	1 cut(s)	1173
AlwI	GGATC	1 cut(s)	914
Ama87I	CYCGRG	2 cut(s)	482, 1355
AoxI	GGCC	5 cut(s)	136, 839, 996, 1422, 1463
ApaLI	GTGCAC	1 cut(s)	1173
ApeKI	GCWGC	5 cut(s)	88, 698, 887, 905, 1409
ApoI	RAATTY	4 cut(s)	494, 744, 1011, 1579
AseI	ATTAAT	1 cut(s)	173
AspLEI	GCGC	1 cut(s)	1101
AspS9I	GGNCC	4 cut(s)	463, 996, 1217, 1333
AsuC2I	CCSGG	3 cut(s)	35, 721, 1139
AsuHPI	GGTGA	2 cut(s)	356, 1566
AvaI	CYCGRG	2 cut(s)	482, 1355
AvaII	GGWCC	3 cut(s)	463, 1217, 1333
BaeGI	GKGCMC	2 cut(s)	1033, 1177
BanI	GGYRCC	1 cut(s)	1513
BauI	CACGAG	2 cut(s)	1538, 1556
BbsI	GAAGAC	1 cut(s)	798
Bbv12I	GWGCWC	2 cut(s)	1177, 1210
BbvCI	CCTCAGC	1 cut(s)	525
BbvI	GCAGC	5 cut(s)	100, 685, 892, 899, 1396
BccI	CCATC	7 cut(s)	203, 239, 290, 988, 1001, 1187, 1634
BceAI	ACGGC	2 cut(s)	833, 1372
BciT130I	CCWGG	4 cut(s)	423, 1260, 1344, 1519
BcnI	CCSGG	3 cut(s)	35, 721, 1139
BcoDI	GTCTC	4 cut(s)	43, 412, 594, 1341
BfaI	CTAG	2 cut(s)	596, 1166
BfmI	CTRYAG	1 cut(s)	456
BfrI	CTTAAG	1 cut(s)	83
BglII	AGATCT	1 cut(s)	1147
BisI	GCNGC	5 cut(s)	89, 699, 888, 906, 1410
BlsI	GCNGC	5 cut(s)	90, 700, 889, 907, 1411
BmcAI	AGTACT	1 cut(s)	310
Bme1390I	CCNGG	7 cut(s)	35, 423, 721, 1139, 1260, 1344, 1519
Bme18I	GGWCC	3 cut(s)	463, 1217, 1333
BmeT110I	CYCGRG	2 cut(s)	482, 1355
BmgT120I	GGNCC	4 cut(s)	463, 996, 1217, 1333
BmiI	GGNNCC	8 cut(s)	151, 464, 710, 970, 1257, 1271, 1515, 1624
BmrFI	CCNGG	7 cut(s)	35, 423, 721, 1139, 1260, 1344, 1519
BmsI	GCATC	3 cut(s)	239, 685, 1514
BpiI	GAAGAC	1 cut(s)	798
BplI	GAGNNNNNCTC	2 cut(s)	1338, 1370
BpmI	CTGGAG	4 cut(s)	348, 1115, 1194, 1365
Bpu10I	CCTNAGC	1 cut(s)	525
BpuEI	CTTGAG	3 cut(s)	224, 403, 1291
BpuMI	CCSGG	3 cut(s)	35, 721, 1139
BsaAI	YACGTR	1 cut(s)	317
BsaI	GGTCTC	2 cut(s)	43, 412
BsaJI	CCNNGG	7 cut(s)	145, 626, 720, 891, 1425, 1517, 1518
BsaWI	WCCGGW	1 cut(s)	1639
BsaXI	ACNNNNNCTCC	2 cut(s)	1476, 1506
Bsc4I	CCNNNNNNNGG	5 cut(s)	719, 722, 1039, 1138, 1693
Bse118I	RCCGGY	1 cut(s)	1469
Bse1I	ACTGG	4 cut(s)	745, 1132, 1228, 1335
BseBI	CCWGG	4 cut(s)	423, 1260, 1344, 1519
BseDI	CCNNGG	7 cut(s)	145, 626, 720, 891, 1425, 1517, 1518
BseGI	GGATG	3 cut(s)	250, 1012, 1648
BseLI	CCNNNNNNNGG	5 cut(s)	719, 722, 1039, 1138, 1693
BseMII	CTCAG	4 cut(s)	115, 424, 539, 951
BseNI	ACTGG	4 cut(s)	745, 1132, 1228, 1335
BseRI	GAGGAG	1 cut(s)	1355
BseSI	GKGCMC	2 cut(s)	1033, 1177
BseXI	GCAGC	5 cut(s)	100, 685, 892, 899, 1396
BseYI	CCCAGC	1 cut(s)	1032
BsgI	GTGCAG	1 cut(s)	891
Bsh1236I	CGCG	1 cut(s)	948
Bsh1285I	CGRYCG	1 cut(s)	1640
BshFI	GGCC	5 cut(s)	138, 841, 998, 1424, 1465
BshNI	GGYRCC	1 cut(s)	1513
BsiEI	CGRYCG	1 cut(s)	1640
BsiHKAI	GWGCWC	2 cut(s)	1177, 1210
BsiHKCI	CYCGRG	2 cut(s)	482, 1355
BsiSI	CCGG	6 cut(s)	35, 720, 1139, 1231, 1470, 1640
BslFI	GGGAC	3 cut(s)	365, 534, 1250
BslI	CCNNNNNNNGG	5 cut(s)	719, 722, 1039, 1138, 1693
BsmAI	GTCTC	4 cut(s)	43, 412, 594, 1341
BsmFI	GGGAC	3 cut(s)	365, 534, 1250
BsmI	GAATGC	1 cut(s)	1412
BsnI	GGCC	5 cut(s)	138, 841, 998, 1424, 1465
Bso31I	GGTCTC	2 cut(s)	43, 412
BsoBI	CYCGRG	2 cut(s)	482, 1355
Bsp1286I	GDGCHC	3 cut(s)	1033, 1177, 1210
Bsp1407I	TGTACA	1 cut(s)	116
Bsp143I	GATC	4 cut(s)	478, 919, 1147, 1747
Bsp19I	CCATGG	3 cut(s)	145, 626, 891
BspACI	CCGC	1 cut(s)	650
BspANI	GGCC	5 cut(s)	138, 841, 998, 1424, 1465
BspCNI	CTCAG	4 cut(s)	114, 423, 538, 950
BspFNI	CGCG	1 cut(s)	948
BspHI	TCATGA	1 cut(s)	475
BspLI	GGNNCC	8 cut(s)	151, 464, 710, 970, 1257, 1271, 1515, 1624
BspPI	GGATC	1 cut(s)	914
BspT107I	GGYRCC	1 cut(s)	1513
BspTI	CTTAAG	1 cut(s)	83
BspTNI	GGTCTC	2 cut(s)	43, 412
BsrFI	RCCGGY	1 cut(s)	1469
BsrGI	TGTACA	1 cut(s)	116
BsrI	ACTGG	4 cut(s)	745, 1132, 1228, 1335
BssAI	RCCGGY	1 cut(s)	1469
BssECI	CCNNGG	7 cut(s)	145, 626, 720, 891, 1425, 1517, 1518
BssMI	GATC	4 cut(s)	478, 919, 1147, 1747
BssSI	CACGAG	2 cut(s)	1538, 1556
BssT1I	CCWWGG	3 cut(s)	145, 626, 891
Bst2BI	CACGAG	2 cut(s)	1538, 1556
Bst2UI	CCWGG	4 cut(s)	423, 1260, 1344, 1519
Bst4CI	ACNGT	5 cut(s)	60, 313, 804, 928, 1397
BstAFI	CTTAAG	1 cut(s)	83
BstAUI	TGTACA	1 cut(s)	116
BstBAI	YACGTR	1 cut(s)	317
BstC8I	GCNNGC	7 cut(s)	324, 428, 639, 691, 1086, 1467, 1471
BstDEI	CTNAG	8 cut(s)	101, 410, 525, 662, 866, 937, 1094, 1630
BstDSI	CCRYGG	3 cut(s)	145, 626, 891
BstF5I	GGATG	3 cut(s)	250, 1012, 1648
BstFNI	CGCG	1 cut(s)	948
BstHHI	GCGC	1 cut(s)	1101
BstKTI	GATC	4 cut(s)	481, 922, 1150, 1750
BstMAI	GTCTC	4 cut(s)	43, 412, 594, 1341
BstMBI	GATC	4 cut(s)	478, 919, 1147, 1747
BstMCI	CGRYCG	1 cut(s)	1640
BstMWI	GCNNNNNNNGC	7 cut(s)	647, 695, 893, 902, 1384, 1409, 1511
BstNI	CCWGG	4 cut(s)	423, 1260, 1344, 1519
BstNSI	RCATGY	3 cut(s)	430, 641, 1652
BstSCI	CCNGG	7 cut(s)	33, 421, 719, 1137, 1258, 1342, 1517
BstSFI	CTRYAG	1 cut(s)	456
BstSLI	GKGCMC	2 cut(s)	1033, 1177
BstSNI	TACGTA	1 cut(s)	317
BstUI	CGCG	1 cut(s)	948
BstV1I	GCAGC	5 cut(s)	100, 685, 892, 899, 1396
BstV2I	GAAGAC	1 cut(s)	798
BstX2I	RGATCY	1 cut(s)	1147
BstYI	RGATCY	1 cut(s)	1147
BsuRI	GGCC	5 cut(s)	138, 841, 998, 1424, 1465
BtgI	CCRYGG	3 cut(s)	145, 626, 891
BtgZI	GCGATG	2 cut(s)	708, 929
BtsCI	GGATG	3 cut(s)	250, 1012, 1648
BtsI	GCAGTG	1 cut(s)	1480
BtsIMutI	CAGTG	3 cut(s)	418, 1328, 1480
Cac8I	GCNNGC	7 cut(s)	324, 428, 639, 691, 1086, 1467, 1471
CciI	TCATGA	1 cut(s)	475
CfoI	GCGC	1 cut(s)	1101
Cfr10I	RCCGGY	1 cut(s)	1469
Cfr13I	GGNCC	4 cut(s)	463, 996, 1217, 1333
CseI	GACGC	1 cut(s)	937
Csp6I	GTAC	6 cut(s)	61, 117, 291, 309, 314, 941
CviQI	GTAC	6 cut(s)	61, 117, 291, 309, 314, 941
DdeI	CTNAG	8 cut(s)	101, 410, 525, 662, 866, 937, 1094, 1630
DpnI	GATC	4 cut(s)	480, 921, 1149, 1749
DpnII	GATC	4 cut(s)	478, 919, 1147, 1747
DrdI	GACNNNNNNGTC	1 cut(s)	1224
DseDI	GACNNNNNNGTC	1 cut(s)	1224
EaeI	YGGCCR	1 cut(s)	1422
Eco105I	TACGTA	1 cut(s)	317
Eco130I	CCWWGG	3 cut(s)	145, 626, 891
Eco147I	AGGCCT	1 cut(s)	138
Eco31I	GGTCTC	2 cut(s)	43, 412
Eco32I	GATATC	1 cut(s)	1600
Eco47I	GGWCC	3 cut(s)	463, 1217, 1333
Eco57I	CTGAAG	2 cut(s)	471, 663
Eco88I	CYCGRG	2 cut(s)	482, 1355
EcoO109I	RGGNCCY	2 cut(s)	463, 1217
EcoRI	GAATTC	2 cut(s)	744, 1579
EcoRII	CCWGG	4 cut(s)	421, 1258, 1342, 1517
EcoRV	GATATC	1 cut(s)	1600
EcoT14I	CCWWGG	3 cut(s)	145, 626, 891
EcoT22I	ATGCAT	1 cut(s)	639
ErhI	CCWWGG	3 cut(s)	145, 626, 891
FalI	AAGNNNNNCTT	2 cut(s)	1161, 1193
FaqI	GGGAC	3 cut(s)	365, 534, 1250
Fnu4HI	GCNGC	5 cut(s)	89, 699, 888, 906, 1410
FokI	GGATG	3 cut(s)	257, 1019, 1655
Fsp4HI	GCNGC	5 cut(s)	89, 699, 888, 906, 1410
FspBI	CTAG	2 cut(s)	596, 1166
GlaI	GCGC	1 cut(s)	1100
GluI	GCNGC	5 cut(s)	89, 699, 888, 906, 1410
GsaI	CCCAGC	1 cut(s)	1036
GsuI	CTGGAG	4 cut(s)	348, 1115, 1194, 1365
HaeIII	GGCC	5 cut(s)	138, 841, 998, 1424, 1465
HapII	CCGG	6 cut(s)	35, 720, 1139, 1231, 1470, 1640
HgaI	GACGC	1 cut(s)	937
HhaI	GCGC	1 cut(s)	1101
Hin6I	GCGC	1 cut(s)	1099
HinP1I	GCGC	1 cut(s)	1099
HindIII	AAGCTT	1 cut(s)	362
HinfI	GANTC	4 cut(s)	508, 752, 1043, 1485
HpaII	CCGG	6 cut(s)	35, 720, 1139, 1231, 1470, 1640
HphI	GGTGA	2 cut(s)	356, 1566
Hpy166II	GTNNAC	1 cut(s)	1175
Hpy188I	TCNGA	4 cut(s)	272, 985, 1042, 1300
Hpy8I	GTNNAC	1 cut(s)	1175
HpyAV	CCTTC	6 cut(s)	128, 1106, 1163, 1208, 1257, 1698
HpyCH4III	ACNGT	5 cut(s)	60, 313, 804, 928, 1397
HpyCH4IV	ACGT	3 cut(s)	316, 835, 1284
HpyF10VI	GCNNNNNNNGC	7 cut(s)	647, 695, 893, 902, 1384, 1409, 1511
HpyF3I	CTNAG	8 cut(s)	101, 410, 525, 662, 866, 937, 1094, 1630
HpySE526I	ACGT	3 cut(s)	316, 835, 1284
HspAI	GCGC	1 cut(s)	1099
KroI	GCCGGC	1 cut(s)	1469
KroNI	GCCGGC	1 cut(s)	1471
Kzo9I	GATC	4 cut(s)	478, 919, 1147, 1747
LmnI	GCTCC	4 cut(s)	299, 1213, 1275, 1622
Lsp1109I	GCAGC	5 cut(s)	100, 685, 892, 899, 1396
LweI	GCATC	3 cut(s)	239, 685, 1514
MaeI	CTAG	2 cut(s)	596, 1166
MaeII	ACGT	3 cut(s)	316, 835, 1284
MaeIII	GTNAC	5 cut(s)	75, 223, 1315, 1572, 1682
MalI	GATC	4 cut(s)	480, 921, 1149, 1749
MboI	GATC	4 cut(s)	478, 919, 1147, 1747
MboII	GAAGA	7 cut(s)	221, 433, 551, 565, 798, 1121, 1157
MflI	RGATCY	1 cut(s)	1147
MhlI	GDGCHC	3 cut(s)	1033, 1177, 1210
MluCI	AATT	9 cut(s)	494, 744, 817, 986, 1011, 1430, 1525, 1543, 1579
MlyI	GAGTC	2 cut(s)	746, 1494
MmeI	TCCRAC	3 cut(s)	111, 947, 1150
Mph1103I	ATGCAT	1 cut(s)	639
MroNI	GCCGGC	1 cut(s)	1469
MseI	TTAA	6 cut(s)	84, 173, 816, 1433, 1479, 1566
MslI	CAYNNNNRTG	4 cut(s)	186, 608, 1283, 1591
MspCI	CTTAAG	1 cut(s)	83
MspI	CCGG	6 cut(s)	35, 720, 1139, 1231, 1470, 1640
MspR9I	CCNGG	7 cut(s)	35, 423, 721, 1139, 1260, 1344, 1519
Mva1269I	GAATGC	1 cut(s)	1412
MvaI	CCWGG	4 cut(s)	423, 1260, 1344, 1519
MvnI	CGCG	1 cut(s)	948
MwoI	GCNNNNNNNGC	7 cut(s)	647, 695, 893, 902, 1384, 1409, 1511
NaeI	GCCGGC	1 cut(s)	1471
NciI	CCSGG	3 cut(s)	35, 721, 1139
NcoI	CCATGG	3 cut(s)	145, 626, 891
NdeII	GATC	4 cut(s)	478, 919, 1147, 1747
NgoMIV	GCCGGC	1 cut(s)	1469
NlaIV	GGNNCC	8 cut(s)	151, 464, 710, 970, 1257, 1271, 1515, 1624
NmeAIII	GCCGAG	3 cut(s)	1450, 1694, 1704
NmuCI	GTSAC	3 cut(s)	223, 1572, 1682
NsiI	ATGCAT	1 cut(s)	639
NspI	RCATGY	3 cut(s)	430, 641, 1652
PaeI	GCATGC	2 cut(s)	430, 641
PaeR7I	CTCGAG	2 cut(s)	482, 1355
PagI	TCATGA	1 cut(s)	475
PasI	CCCWGGG	1 cut(s)	1518
PceI	AGGCCT	1 cut(s)	138
PctI	GAATGC	1 cut(s)	1412
PdiI	GCCGGC	1 cut(s)	1471
PfeI	GAWTC	2 cut(s)	508, 1043
PkrI	GCNGC	5 cut(s)	90, 700, 889, 907, 1411
PleI	GAGTC	2 cut(s)	746, 1493
PpsI	GAGTC	2 cut(s)	746, 1493
Ppu21I	YACGTR	1 cut(s)	317
PpuMI	RGGWCCY	2 cut(s)	463, 1217
PshBI	ATTAAT	1 cut(s)	173
Psp5II	RGGWCCY	2 cut(s)	463, 1217
Psp6I	CCWGG	4 cut(s)	421, 1258, 1342, 1517
PspFI	CCCAGC	1 cut(s)	1032
PspGI	CCWGG	4 cut(s)	421, 1258, 1342, 1517
PspN4I	GGNNCC	8 cut(s)	151, 464, 710, 970, 1257, 1271, 1515, 1624
PspPI	GGNCC	4 cut(s)	463, 996, 1217, 1333
PspPPI	RGGWCCY	2 cut(s)	463, 1217
PspXI	VCTCGAGB	1 cut(s)	1355
PsuI	RGATCY	1 cut(s)	1147
RsaI	GTAC	6 cut(s)	62, 118, 292, 310, 315, 942
RsaNI	GTAC	6 cut(s)	61, 117, 291, 309, 314, 941
RseI	CAYNNNNRTG	4 cut(s)	186, 608, 1283, 1591
SaqAI	TTAA	6 cut(s)	84, 173, 816, 1433, 1479, 1566
SatI	GCNGC	5 cut(s)	89, 699, 888, 906, 1410
Sau3AI	GATC	4 cut(s)	478, 919, 1147, 1747
Sau96I	GGNCC	4 cut(s)	463, 996, 1217, 1333
ScaI	AGTACT	1 cut(s)	310
SchI	GAGTC	2 cut(s)	746, 1494
ScrFI	CCNGG	7 cut(s)	35, 423, 721, 1139, 1260, 1344, 1519
SduI	GDGCHC	3 cut(s)	1033, 1177, 1210
SfaNI	GCATC	3 cut(s)	239, 685, 1514
SfcI	CTRYAG	1 cut(s)	456
Sfr274I	CTCGAG	2 cut(s)	482, 1355
SinI	GGWCC	3 cut(s)	463, 1217, 1333
SlaI	CTCGAG	2 cut(s)	482, 1355
SmiMI	CAYNNNNRTG	4 cut(s)	186, 608, 1283, 1591
SmlI	CTYRAG	6 cut(s)	83, 239, 382, 482, 1306, 1355
SmoI	CTYRAG	6 cut(s)	83, 239, 382, 482, 1306, 1355
SnaBI	TACGTA	1 cut(s)	317
SphI	GCATGC	2 cut(s)	430, 641
Sse9I	AATT	9 cut(s)	494, 744, 817, 986, 1011, 1430, 1525, 1543, 1579
SseBI	AGGCCT	1 cut(s)	138
SsiI	CCGC	1 cut(s)	650
SspMI	CTAG	2 cut(s)	596, 1166
StuI	AGGCCT	1 cut(s)	138
StyD4I	CCNGG	7 cut(s)	33, 421, 719, 1137, 1258, 1342, 1517
StyI	CCWWGG	3 cut(s)	145, 626, 891
TaaI	ACNGT	5 cut(s)	60, 313, 804, 928, 1397
TaiI	ACGT	3 cut(s)	319, 838, 1287
TaqI	TCGA	5 cut(s)	483, 589, 1356, 1488, 1636
TasI	AATT	9 cut(s)	494, 744, 817, 986, 1011, 1430, 1525, 1543, 1579
TatI	WGTACW	4 cut(s)	60, 116, 308, 940
TfiI	GAWTC	2 cut(s)	508, 1043
Tru1I	TTAA	6 cut(s)	84, 173, 816, 1433, 1479, 1566
Tru9I	TTAA	6 cut(s)	84, 173, 816, 1433, 1479, 1566
TscAI	CASTG	3 cut(s)	418, 1335, 1480
TseFI	GTSAC	3 cut(s)	223, 1572, 1682
TseI	GCWGC	5 cut(s)	88, 698, 887, 905, 1409
Tsp45I	GTSAC	3 cut(s)	223, 1572, 1682
TspDTI	ATGAA	5 cut(s)	427, 749, 840, 1071, 1295
TspGWI	ACGGA	3 cut(s)	501, 1670, 1709
TspRI	CASTG	3 cut(s)	418, 1335, 1480
Vha464I	CTTAAG	1 cut(s)	83
VneI	GTGCAC	1 cut(s)	1173
VpaK11BI	GGWCC	3 cut(s)	463, 1217, 1333
VspI	ATTAAT	1 cut(s)	173
XapI	RAATTY	4 cut(s)	494, 744, 1011, 1579
XbaI	TCTAGA	1 cut(s)	1165
XceI	RCATGY	3 cut(s)	430, 641, 1652
XhoI	CTCGAG	2 cut(s)	482, 1355
XspI	CTAG	2 cut(s)	596, 1166
ZrmI	AGTACT	1 cut(s)	310
Zsp2I	ATGCAT	1 cut(s)	639

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.