Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0003028

Physical Location & Seq

Genomic Coordinates Reverse (-)

11957099 .. 11961039

Gene Structure 3941 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006928

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGGGGTCTTCACGGTTGTTGTTCAAGAGGTTTTGCGGCCTCTACAAACCCATTGCCAGAATCCAAGCATACCCATCTGCCTACGTCCCCACAAGAGCCCTATCACACTCCAAGCTTTTCAGCAATGGCGACAATTCTGTGCTTCCGGTTCTGATAGTGGGTGCAGGACCTGTGGGTCTCGTTCTTTCTATACTCCTAACAAAGCTAGGGGTCAAATGCGTGGTTTTGGAGAAAAGTACAAGTTTCTCCAGACATCCACAGGCACACTTCATTAACAATCGGTCGATGGAGGTATTTCGCAAATTGGATGGCTTGGCAGAGGAGATCCAGAGGTCTCAACCACCAGTAGATTTGTGGAGAAAATTTATATATTGCACTTCGCTCTCTGGTTCCATTCTTGGCTCAGTAGACCATATGCAACCTCAAGATTTTGAGCAAGTTGTCAGCCCGGTCTCTGTTGCACACTTCTCTCAGTACAAACTGAATGCATTACTACTTAAGCAGCTTGAAAATCTCAGCTTCAAGTATTGTACCCCTGAAGGGTTGAAAGGCCTTGACCATGAACCCCTTGAGGCAAGGCAAATATTGATGGGCCATGAGTGTGTTTCCATCAATGCCAGTGATGATATTGTTTCCGTGACTGCATCTTTTCTCAAGGATGGGAAACATATGGAGAGGAATATCAGATGCAATATGATTGTAGGTACAGATGGTGCTGGAAGTACTGTACGTAAGCTGGCTGGTATAGATATGAGAGGTGAAAAGGACTTGCAGAAGCTTGTGAGTGTCCATTTCTTGAGCAGAGACCTTGGAAATTACTTGCTCAGTGAGAGACCTGGCATGCTGTTTTTTATCTTCAATACTGAAGCTATAGGGGTCCTTGTTGCACATGATCTCAAGCAAGGGGAATTTGTATTGCAGATGCCATTTTATCCACCCCAGCAAAACCTTGAAGATTTCAGTCCCAAGACATGTGAGAGGATGATCTTCAAATTGGTAGGTCGAGAGCTTGGAGACATAAATGTGATTGACATAAAACCTTGGGTGATGCATGCTGAAGTTGCCGAGAAGTTTCTAAGTAGTCAAAACCGTGTAATTCTTGCTGGTGATGCTGCTCATCGATTCCCTCCTGCTGGTGGATTTGGTATGAATACCGGAATTCAGGATTCTCATAACCTTGCCTGGAAGATAGCTTCTGTAGTAAAGGGTATTGCACCACCTTCAATGCTTAATACTTATGAAACAGAACGTAGGCCGATTGCCATTTTCAATACAACTCTTAGTATTCAGAACTTCAAAGCAGCCATGGCTGTTCCTGGTGCGCTTGGTCTTGATCCAACTATTGCAAACTCAGTACATCGAGTAATAAATAAGGGGGTTGGGTCCATTTTACCATCCGGACTACAGAGTGCCATTTTGGATGGAATTTTCACCTTAGGTCGTGCACAGTTATCAGAAAGTCTTTTGAATGAAAACAACCCACTTGGAGCTTTAAGGCTTGCTAATCTGAGACGCATATTTGAAGAAGGAAAGAGTCTCCAGCTCCAGTTCCCAGCAGAAGATCTTGGTTTCAGGTACCAAGAAGGCGCACTTGTTCCTGACCATGATGGTGCACTGGGTGGCCCAGATGGACCTACTGGTCGCCGGAGGGACTATGTTCCTACTGCAGATCCAGGTTCAAGGCTTCCTCACATGAATGTGAGGATATTGTCAAATTCATCGAGTGAGGCAACTATTTCTACACTGGATCTTATATCTGGAGACAAAATTGAGTTTCTCGTTATTATAGCACCGATAGAGCCATCCTACCATCTTGCTCATGCTGCATTGAAGGTGGCTGAGGAATTCAAAGTTTCTGCCAGGGTGTGCGTGTTGTGGCCTGCTGGTAGTGCTAAGGGAGTTGAGGTAGGAAGTAAGGCATCATTGAAACCGTGGGAGAATTACATAGATGTTATGGAAGTTAAAAAGTCATCAGATGCTTCGTCATGGTGGGACATCTGTCAAATGACTGATAAAGGAGCCATCCTAGTTCGGCCTGATGAGCATGTTGCTTGGCGTCTGAAGTCTGGAGTTGTTGGGGACCCTATGAGGGAAATGAGAAGGGCTTTTTCTGCTGCCCTAGGCTTGAAGTCACATATTAAAGACCAAGAAGCTGATCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_3

Protein Analysis

721

Amino Acids

79.13

Weight (kDa)

7.99

Isoelectric Point (pI)

37.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	49 - 421	1.2e-70	FAD binding domain
Rng_hyd_C	PF21274	639 - 706	4.4e-07	Aromatic-ring hydroxylase, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003028)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24340
fragaria_vesca	FvH4_4g24220 FvH4_4g24220 FvH4_4g24220 FvH4_4g24220 FvH4_4g24220 FvH4_4g24220 FvH4_4g24220 FvH4_4g24220 FvH4_4g24220 FvH4_4g24220
malus_domestica	MD13G1113200.v1.1 MD16G1112300.v1.1
prunus_persica	Prupe.1G232900_v2.0.a1
pyrus_communis	pycom13g09860
rosa_chinensis	RchiOBHm_Chr4g0431061
rosa_laevigata	RLG00000006928 RLG00000016399
rosa_multiflora	Rmu_co8265599.1_g000001 Rmu_sc0003592.1_g000008 Rmu_sc0010203.1_g000008 Rmu_sc0041255.1_g000001 Rmu_sc0043112.1_g000001
rosa_roxburghii	Rroxscaffold_2G00114870 Rroxscaffold_2G00148110 Rroxscaffold_5G00372680
rosa_rugosa	Rorug02G0035800 Rorug02G0035800 Rorug02G0035900 Rorug02G0035900 Rorug04G0247900
rosa_samantha	Rh2DG080900 Rh2DG081100 Rh4AG304600 Rh4BG311800 Rh4CG328100 Rh4DG308300
rosa_wichuraiana	Rw4G026450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	174, 1638
Acc65I	GGTACC	1 cut(s)	1575
AccB1I	GGYRCC	1 cut(s)	1575
AccI	GTMKAC	1 cut(s)	408
AccIII	TCCGGA	1 cut(s)	1397
AciI	CCGC	1 cut(s)	36
AclWI	GGATC	4 cut(s)	319, 1328, 1664, 1755
AcsI	RAATTY	6 cut(s)	362, 908, 1158, 1425, 1714, 1844
AcuI	CTGAAG	4 cut(s)	558, 885, 1077, 2081
AcyI	GRCGYC	1 cut(s)	2056
AdeI	CACNNNGTG	1 cut(s)	1619
AfaI	GTAC	8 cut(s)	238, 476, 532, 706, 724, 729, 1356, 1577
AfiI	CCNNNNNNNGG	4 cut(s)	540, 1133, 1136, 2089
AflII	CTTAAG	1 cut(s)	497
AflIII	ACRYGT	1 cut(s)	971
AjnI	CCWGG	5 cut(s)	835, 1181, 1315, 1672, 1859
Alw21I	GWGCWC	2 cut(s)	1447, 1615
Alw26I	GTCTC	9 cut(s)	182, 339, 457, 798, 826, 1008, 1504, 1541, 1755
Alw44I	GTGCAC	2 cut(s)	1443, 1611
AlwI	GGATC	4 cut(s)	319, 1328, 1664, 1755
AlwNI	CAGNNNCTG	1 cut(s)	170
Aor13HI	TCCGGA	1 cut(s)	1397
AoxI	GGCC	7 cut(s)	37, 550, 592, 1253, 1621, 1877, 2033
ApaLI	GTGCAC	2 cut(s)	1443, 1611
ApeKI	GCWGC	5 cut(s)	502, 1112, 1301, 1823, 2114
ApoI	RAATTY	6 cut(s)	362, 908, 1158, 1425, 1714, 1844
Asp718I	GGTACC	1 cut(s)	1575
AspA2I	CCTAGG	1 cut(s)	2119
AspLEI	GCGC	2 cut(s)	1324, 1589
AspS9I	GGNCC	7 cut(s)	167, 592, 877, 1383, 1622, 1631, 2080
AsuC2I	CCSGG	1 cut(s)	449
AsuHPI	GGTGA	4 cut(s)	770, 1057, 1118, 1423
AvaII	GGWCC	5 cut(s)	167, 877, 1383, 1631, 2080
AvrII	CCTAGG	1 cut(s)	2119
AxyI	CCTNAGG	1 cut(s)	1435
BaeGI	GKGCMC	2 cut(s)	1447, 1615
BanI	GGYRCC	1 cut(s)	1575
BanII	GRGCYC	1 cut(s)	100
Bbv12I	GWGCWC	2 cut(s)	1447, 1615
BbvCI	CCTCAGC	1 cut(s)	1839
BbvI	GCAGC	5 cut(s)	514, 1099, 1313, 1810, 2101
BciT130I	CCWGG	5 cut(s)	837, 1183, 1317, 1674, 1861
BclI	TGATCA	1 cut(s)	2155
BcnI	CCSGG	1 cut(s)	449
BcoDI	GTCTC	9 cut(s)	182, 339, 457, 798, 826, 1008, 1504, 1541, 1755
BfaI	CTAG	3 cut(s)	206, 2027, 2120
BfmI	CTRYAG	4 cut(s)	870, 1197, 1403, 1665
BfrI	CTTAAG	1 cut(s)	497
BglII	AGATCT	1 cut(s)	1561
BisI	GCNGC	6 cut(s)	37, 503, 1113, 1302, 1824, 2115
BlnI	CCTAGG	1 cut(s)	2119
BlsI	GCNGC	6 cut(s)	38, 504, 1114, 1303, 1825, 2116
BmcAI	AGTACT	1 cut(s)	724
Bme1390I	CCNGG	6 cut(s)	449, 837, 1183, 1317, 1674, 1861
Bme18I	GGWCC	5 cut(s)	167, 877, 1383, 1631, 2080
BmgT120I	GGNCC	7 cut(s)	167, 592, 877, 1383, 1622, 1631, 2080
BmiI	GGNNCC	7 cut(s)	391, 878, 1384, 1577, 2020, 2081, 2082
BmrFI	CCNGG	6 cut(s)	449, 837, 1183, 1317, 1674, 1861
BmrI	ACTGGG	1 cut(s)	1625
BmsI	GCATC	7 cut(s)	653, 677, 912, 1038, 1099, 1928, 1966
BmuI	ACTGGG	1 cut(s)	1625
BoxI	GACNNNNGTC	1 cut(s)	1998
BpmI	CTGGAG	5 cut(s)	232, 1523, 1529, 1779, 2088
Bpu10I	CCTNAGC	2 cut(s)	1839, 1893
BpuEI	CTTGAG	5 cut(s)	408, 590, 638, 817, 881
BpuMI	CCSGG	1 cut(s)	449
Bsa29I	ATCGAT	1 cut(s)	1120
BsaAI	YACGTR	1 cut(s)	731
BsaHI	GRCGYC	1 cut(s)	2056
BsaI	GGTCTC	5 cut(s)	182, 339, 457, 798, 826
BsaJI	CCNNGG	6 cut(s)	808, 1040, 1305, 1860, 1931, 2119
BsaWI	WCCGGW	3 cut(s)	145, 1154, 1397
BsaXI	ACNNNNNCTCC	2 cut(s)	1890, 1920
Bsc4I	CCNNNNNNNGG	4 cut(s)	540, 1133, 1136, 2089
Bse1I	ACTGG	6 cut(s)	344, 618, 1546, 1620, 1642, 1749
Bse21I	CCTNAGG	1 cut(s)	1435
Bse3DI	GCAATG	2 cut(s)	51, 130
BseAI	TCCGGA	1 cut(s)	1397
BseBI	CCWGG	5 cut(s)	837, 1183, 1317, 1674, 1861
BseCI	ATCGAT	1 cut(s)	1120
BseDI	CCNNGG	6 cut(s)	808, 1040, 1305, 1860, 1931, 2119
BseGI	GGATG	8 cut(s)	253, 313, 664, 987, 1394, 1426, 1802, 2022
BseLI	CCNNNNNNNGG	4 cut(s)	540, 1133, 1136, 2089
BseMI	GCAATG	2 cut(s)	51, 130
BseMII	CTCAG	7 cut(s)	417, 485, 529, 838, 1365, 1499, 1830
BseNI	ACTGG	6 cut(s)	344, 618, 1546, 1620, 1642, 1749
BseRI	GAGGAG	1 cut(s)	335
BseSI	GKGCMC	2 cut(s)	1447, 1615
BseXI	GCAGC	5 cut(s)	514, 1099, 1313, 1810, 2101
BseYI	CCCAGC	2 cut(s)	939, 1552
BsgI	GTGCAG	1 cut(s)	183
Bsh1285I	CGRYCG	1 cut(s)	284
BshFI	GGCC	7 cut(s)	39, 552, 594, 1255, 1623, 1879, 2035
BshNI	GGYRCC	1 cut(s)	1575
BshVI	ATCGAT	1 cut(s)	1120
BsiEI	CGRYCG	1 cut(s)	284
BsiHKAI	GWGCWC	2 cut(s)	1447, 1615
BsiSI	CCGG	5 cut(s)	146, 449, 1155, 1398, 1645
BslFI	GGGAC	5 cut(s)	71, 948, 1664, 2006, 2093
BslI	CCNNNNNNNGG	4 cut(s)	540, 1133, 1136, 2089
BsmAI	GTCTC	9 cut(s)	182, 339, 457, 798, 826, 1008, 1504, 1541, 1755
BsmBI	CGTCTC	1 cut(s)	1504
BsmFI	GGGAC	5 cut(s)	71, 948, 1664, 2006, 2093
BsmI	GAATGC	1 cut(s)	490
BsnI	GGCC	7 cut(s)	39, 552, 594, 1255, 1623, 1879, 2035
Bso31I	GGTCTC	5 cut(s)	182, 339, 457, 798, 826
Bsp1286I	GDGCHC	3 cut(s)	100, 1447, 1615
Bsp13I	TCCGGA	1 cut(s)	1397
Bsp143I	GATC	8 cut(s)	324, 892, 984, 1333, 1561, 1669, 1747, 2155
Bsp19I	CCATGG	1 cut(s)	1305
BspACI	CCGC	1 cut(s)	36
BspANI	GGCC	7 cut(s)	39, 552, 594, 1255, 1623, 1879, 2035
BspCNI	CTCAG	7 cut(s)	416, 484, 528, 837, 1364, 1500, 1831
BspDI	ATCGAT	1 cut(s)	1120
BspEI	TCCGGA	1 cut(s)	1397
BspLI	GGNNCC	7 cut(s)	391, 878, 1384, 1577, 2020, 2081, 2082
BspMAI	CTGCAG	1 cut(s)	1669
BspPI	GGATC	4 cut(s)	319, 1328, 1664, 1755
BspT107I	GGYRCC	1 cut(s)	1575
BspTI	CTTAAG	1 cut(s)	497
BspTNI	GGTCTC	5 cut(s)	182, 339, 457, 798, 826
BsrDI	GCAATG	2 cut(s)	51, 130
BsrI	ACTGG	6 cut(s)	344, 618, 1546, 1620, 1642, 1749
BssECI	CCNNGG	6 cut(s)	808, 1040, 1305, 1860, 1931, 2119
BssMI	GATC	8 cut(s)	324, 892, 984, 1333, 1561, 1669, 1747, 2155
BssNI	GRCGYC	1 cut(s)	2056
BssT1I	CCWWGG	4 cut(s)	808, 1040, 1305, 2119
Bst2UI	CCWGG	5 cut(s)	837, 1183, 1317, 1674, 1861
Bst4CI	ACNGT	5 cut(s)	15, 727, 1091, 1449, 1932
BstACI	GRCGYC	1 cut(s)	2056
BstAFI	CTTAAG	1 cut(s)	497
BstBAI	YACGTR	1 cut(s)	731
BstC8I	GCNNGC	5 cut(s)	738, 842, 1053, 1500, 1881
BstDSI	CCRYGG	2 cut(s)	1305, 1931
BstF5I	GGATG	8 cut(s)	253, 313, 664, 987, 1394, 1426, 1802, 2022
BstHHI	GCGC	2 cut(s)	1324, 1589
BstKTI	GATC	8 cut(s)	327, 895, 987, 1336, 1564, 1672, 1750, 2158
BstMAI	GTCTC	9 cut(s)	182, 339, 457, 798, 826, 1008, 1504, 1541, 1755
BstMBI	GATC	8 cut(s)	324, 892, 984, 1333, 1561, 1669, 1747, 2155
BstMCI	CGRYCG	1 cut(s)	284
BstMWI	GCNNNNNNNGC	7 cut(s)	1061, 1109, 1307, 1823, 1889, 2041, 2111
BstNI	CCWGG	5 cut(s)	837, 1183, 1317, 1674, 1861
BstNSI	RCATGY	4 cut(s)	844, 975, 1055, 2048
BstPAI	GACNNNNGTC	1 cut(s)	1998
BstSCI	CCNGG	6 cut(s)	447, 835, 1181, 1315, 1672, 1859
BstSFI	CTRYAG	4 cut(s)	870, 1197, 1403, 1665
BstSLI	GKGCMC	2 cut(s)	1447, 1615
BstSNI	TACGTA	1 cut(s)	731
BstV1I	GCAGC	5 cut(s)	514, 1099, 1313, 1810, 2101
BstX2I	RGATCY	4 cut(s)	324, 1561, 1669, 1747
BstYI	RGATCY	4 cut(s)	324, 1561, 1669, 1747
Bsu15I	ATCGAT	1 cut(s)	1120
Bsu36I	CCTNAGG	1 cut(s)	1435
BsuRI	GGCC	7 cut(s)	39, 552, 594, 1255, 1623, 1879, 2035
BsuTUI	ATCGAT	1 cut(s)	1120
BtgI	CCRYGG	2 cut(s)	1305, 1931
BtsCI	GGATG	8 cut(s)	253, 313, 664, 987, 1394, 1426, 1802, 2022
BtsIMutI	CAGTG	4 cut(s)	625, 832, 1613, 1742
Cac8I	GCNNGC	5 cut(s)	738, 842, 1053, 1500, 1881
CaiI	CAGNNNCTG	1 cut(s)	170
CfoI	GCGC	2 cut(s)	1324, 1589
Cfr13I	GGNCC	7 cut(s)	167, 592, 877, 1383, 1622, 1631, 2080
ClaI	ATCGAT	1 cut(s)	1120
CseI	GACGC	2 cut(s)	1521, 2045
Csp6I	GTAC	8 cut(s)	237, 475, 531, 705, 723, 728, 1355, 1576
CviQI	GTAC	8 cut(s)	237, 475, 531, 705, 723, 728, 1355, 1576
DpnI	GATC	8 cut(s)	326, 894, 986, 1335, 1563, 1671, 1749, 2157
DpnII	GATC	8 cut(s)	324, 892, 984, 1333, 1561, 1669, 1747, 2155
DraIII	CACNNNGTG	1 cut(s)	1619
DrdI	GACNNNNNNGTC	2 cut(s)	174, 1638
DseDI	GACNNNNNNGTC	2 cut(s)	174, 1638
Eco105I	TACGTA	1 cut(s)	731
Eco130I	CCWWGG	4 cut(s)	808, 1040, 1305, 2119
Eco147I	AGGCCT	1 cut(s)	552
Eco24I	GRGCYC	1 cut(s)	100
Eco31I	GGTCTC	5 cut(s)	182, 339, 457, 798, 826
Eco47I	GGWCC	5 cut(s)	167, 877, 1383, 1631, 2080
Eco57I	CTGAAG	4 cut(s)	558, 885, 1077, 2081
Eco81I	CCTNAGG	1 cut(s)	1435
EcoO109I	RGGNCCY	3 cut(s)	167, 877, 2080
EcoRI	GAATTC	2 cut(s)	1158, 1844
EcoRII	CCWGG	5 cut(s)	835, 1181, 1315, 1672, 1859
EcoT14I	CCWWGG	4 cut(s)	808, 1040, 1305, 2119
EcoT22I	ATGCAT	2 cut(s)	490, 1053
EcoT38I	GRGCYC	1 cut(s)	100
ErhI	CCWWGG	4 cut(s)	808, 1040, 1305, 2119
Esp3I	CGTCTC	1 cut(s)	1504
FalI	AAGNNNNNCTT	2 cut(s)	1575, 1607
FaqI	GGGAC	5 cut(s)	71, 948, 1664, 2006, 2093
FauNDI	CATATG	2 cut(s)	414, 669
FbaI	TGATCA	1 cut(s)	2155
FblI	GTMKAC	1 cut(s)	408
Fnu4HI	GCNGC	6 cut(s)	37, 503, 1113, 1302, 1824, 2115
FokI	GGATG	8 cut(s)	240, 320, 671, 994, 1381, 1433, 1789, 2009
FriOI	GRGCYC	1 cut(s)	100
Fsp4HI	GCNGC	6 cut(s)	37, 503, 1113, 1302, 1824, 2115
FspBI	CTAG	3 cut(s)	206, 2027, 2120
GlaI	GCGC	2 cut(s)	1323, 1588
GluI	GCNGC	6 cut(s)	37, 503, 1113, 1302, 1824, 2115
GsaI	CCCAGC	2 cut(s)	943, 1556
GsuI	CTGGAG	5 cut(s)	232, 1523, 1529, 1779, 2088
HaeIII	GGCC	7 cut(s)	39, 552, 594, 1255, 1623, 1879, 2035
HapII	CCGG	5 cut(s)	146, 449, 1155, 1398, 1645
HgaI	GACGC	2 cut(s)	1521, 2045
HhaI	GCGC	2 cut(s)	1324, 1589
Hin1I	GRCGYC	1 cut(s)	2056
Hin6I	GCGC	2 cut(s)	1322, 1587
HinP1I	GCGC	2 cut(s)	1322, 1587
HindIII	AAGCTT	2 cut(s)	113, 776
HinfI	GANTC	4 cut(s)	60, 1122, 1166, 1534
HpaII	CCGG	5 cut(s)	146, 449, 1155, 1398, 1645
HphI	GGTGA	4 cut(s)	770, 1057, 1118, 1423
Hpy166II	GTNNAC	3 cut(s)	409, 1445, 1613
Hpy188I	TCNGA	7 cut(s)	153, 686, 1290, 1456, 1509, 1975, 2061
Hpy8I	GTNNAC	3 cut(s)	409, 1445, 1613
HpyAV	CCTTC	6 cut(s)	533, 1230, 1520, 1577, 1825, 2094
HpyCH4III	ACNGT	5 cut(s)	15, 727, 1091, 1449, 1932
HpyCH4IV	ACGT	3 cut(s)	84, 730, 1249
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1061, 1109, 1307, 1823, 1889, 2041, 2111
HpySE526I	ACGT	3 cut(s)	84, 730, 1249
Hsp92I	GRCGYC	1 cut(s)	2056
HspAI	GCGC	2 cut(s)	1322, 1587
KflI	GGGWCCC	1 cut(s)	2080
Kpn2I	TCCGGA	1 cut(s)	1397
KpnI	GGTACC	1 cut(s)	1579
Ksp22I	TGATCA	1 cut(s)	2155
Kzo9I	GATC	8 cut(s)	324, 892, 984, 1333, 1561, 1669, 1747, 2155
LmnI	GCTCC	3 cut(s)	1487, 1548, 2018
Lsp1109I	GCAGC	5 cut(s)	514, 1099, 1313, 1810, 2101
LweI	GCATC	7 cut(s)	653, 677, 912, 1038, 1099, 1928, 1966
MaeI	CTAG	3 cut(s)	206, 2027, 2120
MaeII	ACGT	3 cut(s)	84, 730, 1249
MaeIII	GTNAC	2 cut(s)	637, 2130
MalI	GATC	8 cut(s)	326, 894, 986, 1335, 1563, 1671, 1749, 2157
MboI	GATC	8 cut(s)	324, 892, 984, 1333, 1561, 1669, 1747, 2155
MboII	GAAGA	6 cut(s)	847, 965, 979, 1198, 1535, 1571
MflI	RGATCY	4 cut(s)	324, 1561, 1669, 1747
MhlI	GDGCHC	3 cut(s)	100, 1447, 1615
MlyI	GAGTC	1 cut(s)	1543
MmeI	TCCRAC	1 cut(s)	1361
Mph1103I	ATGCAT	2 cut(s)	490, 1053
MroI	TCCGGA	1 cut(s)	1397
MseI	TTAA	6 cut(s)	273, 498, 1230, 1493, 1962, 2139
MslI	CAYNNNNRTG	5 cut(s)	600, 1022, 1608, 1695, 1697
MspCI	CTTAAG	1 cut(s)	497
MspI	CCGG	5 cut(s)	146, 449, 1155, 1398, 1645
MspR9I	CCNGG	6 cut(s)	449, 837, 1183, 1317, 1674, 1861
Mva1269I	GAATGC	1 cut(s)	490
MvaI	CCWGG	5 cut(s)	837, 1183, 1317, 1674, 1861
MwoI	GCNNNNNNNGC	7 cut(s)	1061, 1109, 1307, 1823, 1889, 2041, 2111
NciI	CCSGG	1 cut(s)	449
NcoI	CCATGG	1 cut(s)	1305
NdeI	CATATG	2 cut(s)	414, 669
NdeII	GATC	8 cut(s)	324, 892, 984, 1333, 1561, 1669, 1747, 2155
NlaIV	GGNNCC	7 cut(s)	391, 878, 1384, 1577, 2020, 2081, 2082
NmeAIII	GCCGAG	1 cut(s)	1090
NmuCI	GTSAC	2 cut(s)	637, 2130
NsiI	ATGCAT	2 cut(s)	490, 1053
NspI	RCATGY	4 cut(s)	844, 975, 1055, 2048
PaeI	GCATGC	2 cut(s)	844, 1055
PceI	AGGCCT	1 cut(s)	552
PciI	ACATGT	1 cut(s)	971
PctI	GAATGC	1 cut(s)	490
PfeI	GAWTC	3 cut(s)	60, 1122, 1166
PkrI	GCNGC	6 cut(s)	38, 504, 1114, 1303, 1825, 2116
PleI	GAGTC	1 cut(s)	1542
PpsI	GAGTC	1 cut(s)	1542
Ppu21I	YACGTR	1 cut(s)	731
PpuMI	RGGWCCY	3 cut(s)	167, 877, 2080
PscI	ACATGT	1 cut(s)	971
PshAI	GACNNNNGTC	1 cut(s)	1998
Psp5II	RGGWCCY	3 cut(s)	167, 877, 2080
Psp6I	CCWGG	5 cut(s)	835, 1181, 1315, 1672, 1859
PspFI	CCCAGC	2 cut(s)	939, 1552
PspGI	CCWGG	5 cut(s)	835, 1181, 1315, 1672, 1859
PspN4I	GGNNCC	7 cut(s)	391, 878, 1384, 1577, 2020, 2081, 2082
PspPI	GGNCC	7 cut(s)	167, 592, 877, 1383, 1622, 1631, 2080
PspPPI	RGGWCCY	3 cut(s)	167, 877, 2080
PstI	CTGCAG	1 cut(s)	1669
PstNI	CAGNNNCTG	1 cut(s)	170
PsuI	RGATCY	4 cut(s)	324, 1561, 1669, 1747
RsaI	GTAC	8 cut(s)	238, 476, 532, 706, 724, 729, 1356, 1577
RsaNI	GTAC	8 cut(s)	237, 475, 531, 705, 723, 728, 1355, 1576
RseI	CAYNNNNRTG	5 cut(s)	600, 1022, 1608, 1695, 1697
SaqAI	TTAA	6 cut(s)	273, 498, 1230, 1493, 1962, 2139
SatI	GCNGC	6 cut(s)	37, 503, 1113, 1302, 1824, 2115
Sau3AI	GATC	8 cut(s)	324, 892, 984, 1333, 1561, 1669, 1747, 2155
Sau96I	GGNCC	7 cut(s)	167, 592, 877, 1383, 1622, 1631, 2080
ScaI	AGTACT	1 cut(s)	724
SchI	GAGTC	1 cut(s)	1543
ScrFI	CCNGG	6 cut(s)	449, 837, 1183, 1317, 1674, 1861
SduI	GDGCHC	3 cut(s)	100, 1447, 1615
SfaNI	GCATC	7 cut(s)	653, 677, 912, 1038, 1099, 1928, 1966
SfcI	CTRYAG	4 cut(s)	870, 1197, 1403, 1665
SinI	GGWCC	5 cut(s)	167, 877, 1383, 1631, 2080
SmiMI	CAYNNNNRTG	5 cut(s)	600, 1022, 1608, 1695, 1697
SmlI	CTYRAG	6 cut(s)	423, 497, 569, 653, 796, 896
SmoI	CTYRAG	6 cut(s)	423, 497, 569, 653, 796, 896
SnaBI	TACGTA	1 cut(s)	731
SphI	GCATGC	2 cut(s)	844, 1055
SseBI	AGGCCT	1 cut(s)	552
SsiI	CCGC	1 cut(s)	36
SspI	AATATT	1 cut(s)	585
SspMI	CTAG	3 cut(s)	206, 2027, 2120
StuI	AGGCCT	1 cut(s)	552
StyD4I	CCNGG	6 cut(s)	447, 835, 1181, 1315, 1672, 1859
StyI	CCWWGG	4 cut(s)	808, 1040, 1305, 2119
TaaI	ACNGT	5 cut(s)	15, 727, 1091, 1449, 1932
TaiI	ACGT	3 cut(s)	87, 733, 1252
TaqI	TCGA	5 cut(s)	284, 1003, 1120, 1360, 1721
TaqII	GACCGA	1 cut(s)	270
TatI	WGTACW	4 cut(s)	236, 474, 722, 1354
TauI	GCSGC	1 cut(s)	39
TfiI	GAWTC	3 cut(s)	60, 1122, 1166
Tru1I	TTAA	6 cut(s)	273, 498, 1230, 1493, 1962, 2139
Tru9I	TTAA	6 cut(s)	273, 498, 1230, 1493, 1962, 2139
TscAI	CASTG	4 cut(s)	625, 832, 1620, 1749
TseFI	GTSAC	2 cut(s)	637, 2130
TseI	GCWGC	5 cut(s)	502, 1112, 1301, 1823, 2114
Tsp45I	GTSAC	2 cut(s)	637, 2130
TspDTI	ATGAA	7 cut(s)	259, 576, 1163, 1254, 1485, 1707, 1709
TspGWI	ACGGA	1 cut(s)	625
TspRI	CASTG	4 cut(s)	625, 832, 1620, 1749
Vha464I	CTTAAG	1 cut(s)	497
VneI	GTGCAC	2 cut(s)	1443, 1611
VpaK11BI	GGWCC	5 cut(s)	167, 877, 1383, 1631, 2080
XapI	RAATTY	6 cut(s)	362, 908, 1158, 1425, 1714, 1844
XceI	RCATGY	4 cut(s)	844, 975, 1055, 2048
XcmI	CCANNNNNNNNNTGG	1 cut(s)	351
XmaJI	CCTAGG	1 cut(s)	2119
XmiI	GTMKAC	1 cut(s)	408
XspI	CTAG	3 cut(s)	206, 2027, 2120
ZrmI	AGTACT	1 cut(s)	724
Zsp2I	ATGCAT	2 cut(s)	490, 1053

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.