Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0006402

Physical Location & Seq

Genomic Coordinates Forward (+)

13552569 .. 13556470

Gene Structure 3902 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g17710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGTCGAGACCCGCCAACTTATATACGCACACATCAGAAGCCATTCAGCATAAAAACAAAAAACCAGAAAATATGAGAACCAAAACTCTGAACGTCTCCTCCGCCCTGCTCTGCTTCTTCTTTCTCAGCTGCCACCACCTCCTCCGCCATGCAGAAGCTCAAGTTCCGAGCACAGAAGGATACACCTGCTCAGCCAAAGCCAACCAAACCGCCGACCCATGCCAGACCTACGCCTTGTACCGAGCCCTCTCCCCCGACTTCCTCGACCTCGCCGCCATCGGAGACCTCTTCCAAGTCAGCCGCCTCATGATCTCCAACCCCAGCAACATCTCCTCCCCGAATGCCTCCCTTGTCGCCGGCCAACCCCTCTTCGTCCCCCTCTCATGCTCCTGCAAGTCCCCCAACTCCTCCATCTCCATTTCCTACGCCAATATCTCCTTCACCATCAAAGCCGGCGACACTTTCTACCAGATCTCCACCCACAACTTCCAAAACCTCACCACCTACCAGTCCGTCGAGCTCGTAAACCCTGATCTGGTCGCCACCAACCTAACCATCGGCGTCACCGCCTATTTTCCCATCTTCTGCAAGTGCCCCAGCAAAACCCAGGTCGGAAACGGAACCAATTACCTCATCTCGTACGTTTTCCGGCCGTCTGACAACATCTCGACCGTTGCTTCATTTTTCGGGGTGCAAGCAAAGGCCATAACCGATTTAAACGGCAACAACATCCAGCCTTTTGACACGGTTTTCGTGCCGGTGGCTCGCCTTCCAGTACTCTCCCAACCCACTGTTGTTCCTTCTGCTGCACCGTCTGGGAAGACAGAGAGGAAAGGAGTGATCAGAGGGCTGGCAATTGGGCTGGGAATTACCGGACTTGTGCTGATTTTCGTTGTCGGGTTTTTGATTTACAGAGACGGATTGCTGAAGAAGAAGATTGGTGGGAAGGGAGATGAGGAGAATAAGGTTCTGTACAAGAGCAAGCAGGGGTCGGAGAGGGCGAAGGAAATGGAGGTGGGTTTGTTGGCGGATGTTTCGGATTGCTTGGACAAGTACAAAGTGTTTGGGATTGAAGAGTTGAGAGAGGCCACAGATGGGTTCAGAGAAAGTAGCTTGATTGAAGGGTCCGTGTATAAAGGCTCCATTAATGGAGATTTCTATGCCATCAAGAAGATGAAGTGGAATGCCTACGAGGAGCTCAAGATTTTGCAAAAGGTAAACCATGGCAGTTTGGTGAAGCTAGAGGGTTTCTGCATAGACTCGGAGGATGATTCTTGCTATCTAATTTACGAGTATGTCGAAAATGGTTCTCTTTATTCATGGCTGCATGAAAACAAGAATGAAAAATTGAGTTGGAAGACAAGGCTGCAAGTTGCTATCGACGTTGCAAACGGTCTCCAATACATTCACGAGCACACTAGGCCGAGGGTTGTGCACAAAGACATCAAGAGCAGCAATATTCTCTTAGATTCGAACATGAGAGCCAAAATAGCCAATTTTGGGCTAGCAAAGACTGGTTGCAATGCCATAACAATGCACATTGTTGGAACTCAAGGCTACATTGCACCAGAGTATCTAGCTGACGGGGTGGTGTCAACAAAAATGGATGTTTTCTCTTTTGGAGTGGTGTTATTAGAGCTCGTTTCGGGGAAGGAAGCGATTGATGAAGATGGAAATGTTTTGTGGGCAAGTGCTGGTAGGATTTTGGAGGGAAATGAGGAAGAGAAGGCAAGGAAACTCAGGGAGTGGGTGGACACTGAAGTTTTCTCGGAGTCATGCTCAGTGGAGAGCATACTGAATGTTGTGACTGTTGCCATTGCTTGTGTGCATAAAGATCCTTCAAAAAGGCCAACTATGGTGGATATTGTCTATGCCTTGAGTAAGAGTGATGATTTGTTTTTTGACGTCTCCGATAATGGATCATCGGCTCCCCCAGTCAGAGCAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase

Protein Analysis

650

Amino Acids

71.37

Weight (kDa)

6.39

Isoelectric Point (pI)

41.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	74 - 131	6.6e-17	NFP/LYK LysM1 domain
LysM2_NFP	PF23457	141 - 195	8.7e-22	NFP LysM2 domain
LysM2_CERK1_LYK3_4_5	PF23472	143 - 189	7.9e-07	LYK3/4/5 LysM2 domain
LysM3_NFP	PF23462	210 - 248	3.6e-06	NFP LysM3 domain
Pkinase	PF00069	383 - 623	4.8e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	393 - 625	1.2e-37	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006402)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02221
malus_domestica	MD13G1203700.v1.1 MD13G1203800.v1.1 MD16G1205900.v1.1
prunus_persica	Prupe.1G027000_v2.0.a1 Prupe.1G027000_v2.0.a1 Prupe.1G027000_v2.0.a1
pyrus_communis	pycom13g17710 pycom16g17320
rosa_chinensis	RchiOBHm_Chr4g0389541
rosa_laevigata	RLG00000009973 RLG00000009975
rosa_multiflora	Rmu_co8296341.1_g000001 Rmu_co8368025.1_g000001 Rmu_sc0002498.1_g000001 Rmu_sc0003347.1_g000004 Rmu_sc0003582.1_g000008 Rmu_sc0016342.1_g000011
rosa_roxburghii	Rroxscaffold_5G00335500
rosa_rugosa	Rorug03G0323800
rosa_samantha	Rh4AG028200 Rh4BG021400 Rh4CG030100 Rh4DG021900
rosa_wichuraiana	Rw0G017330 Rw4G002050 Rw4G002090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	194
AatII	GACGTC	1 cut(s)	1908
Acc36I	ACCTGC	1 cut(s)	194
AciI	CCGC	8 cut(s)	12, 102, 145, 210, 273, 301, 567, 1028
AclWI	GGATC	2 cut(s)	1829, 1927
AcoI	YGGCCR	2 cut(s)	358, 650
AcuI	CTGAAG	2 cut(s)	947, 1779
AcyI	GRCGYC	2 cut(s)	561, 1905
AfaI	GTAC	5 cut(s)	239, 641, 777, 974, 1055
AfiI	CCNNNNNNNGG	3 cut(s)	535, 1095, 1500
AgsI	TTSAA	3 cut(s)	1073, 1121, 1842
AjnI	CCWGG	1 cut(s)	606
AjuI	GAANNNNNNNTTGG	2 cut(s)	422, 454
AloI	GAACNNNNNNTCC	2 cut(s)	83, 115
AluBI	AGCT	8 cut(s)	129, 158, 520, 1113, 1198, 1240, 1580, 1639
AluI	AGCT	8 cut(s)	129, 158, 520, 1113, 1198, 1240, 1580, 1639
Alw21I	GWGCWC	6 cut(s)	173, 522, 1200, 1416, 1437, 1641
Alw26I	GTCTC	5 cut(s)	100, 276, 909, 1400, 1912
Alw44I	GTGCAC	1 cut(s)	1433
AlwI	GGATC	2 cut(s)	1829, 1927
AoxI	GGCC	6 cut(s)	358, 650, 702, 1086, 1421, 1847
ApaLI	GTGCAC	1 cut(s)	1433
ApeKI	GCWGC	5 cut(s)	129, 806, 1324, 1366, 1452
ArsI	GACNNNNNNTTYG	4 cut(s)	594, 626, 734, 766
AseI	ATTAAT	1 cut(s)	1146
Asp700I	GAANNNNTTC	1 cut(s)	42
AspS9I	GGNCC	1 cut(s)	1125
AsuHPI	GGTGA	4 cut(s)	433, 490, 556, 1246
AsuII	TTCGAA	1 cut(s)	1472
AsuNHI	GCTAGC	1 cut(s)	1504
AvaII	GGWCC	1 cut(s)	1125
BaeGI	GKGCMC	2 cut(s)	596, 1437
BaeI	ACNNNNGTAYC	2 cut(s)	1556, 1589
BanII	GRGCYC	4 cut(s)	247, 522, 1200, 1641
BauI	CACGAG	1 cut(s)	1409
BbsI	GAAGAC	2 cut(s)	827, 1364
Bbv12I	GWGCWC	6 cut(s)	173, 522, 1200, 1416, 1437, 1641
BbvI	GCAGC	5 cut(s)	116, 793, 1311, 1353, 1464
BccI	CCATC	8 cut(s)	284, 419, 452, 563, 587, 1088, 1172, 1664
BceAI	ACGGC	2 cut(s)	637, 736
BcgI	CGANNNNNNTGC	2 cut(s)	1414, 1448
BciT130I	CCWGG	1 cut(s)	608
BciVI	GTATCC	1 cut(s)	173
BclI	TGATCA	1 cut(s)	840
BcoDI	GTCTC	5 cut(s)	100, 276, 909, 1400, 1912
BfaI	CTAG	4 cut(s)	1241, 1419, 1505, 1577
BfuAI	ACCTGC	1 cut(s)	194
BfuI	GTATCC	1 cut(s)	173
BglII	AGATCT	1 cut(s)	471
BisI	GCNGC	7 cut(s)	130, 273, 301, 807, 1325, 1367, 1453
BlpI	GCTNAGC	1 cut(s)	190
BlsI	GCNGC	7 cut(s)	131, 274, 302, 808, 1326, 1368, 1454
BmcAI	AGTACT	1 cut(s)	777
Bme1390I	CCNGG	1 cut(s)	608
Bme18I	GGWCC	1 cut(s)	1125
BmgT120I	GGNCC	1 cut(s)	1125
BmiI	GGNNCC	4 cut(s)	622, 1126, 1141, 1929
BmrFI	CCNGG	1 cut(s)	608
BmrI	ACTGGG	1 cut(s)	1928
BmtI	GCTAGC	1 cut(s)	1508
BmuI	ACTGGG	1 cut(s)	1928
BpiI	GAAGAC	2 cut(s)	827, 1364
BplI	GAGNNNNNCTC	2 cut(s)	1763, 1795
Bpu1102I	GCTNAGC	1 cut(s)	190
Bpu14I	TTCGAA	1 cut(s)	1472
BpuEI	CTTGAG	4 cut(s)	144, 1184, 1536, 1897
BsaHI	GRCGYC	2 cut(s)	561, 1905
BsaI	GGTCTC	2 cut(s)	276, 1400
BsaJI	CCNNGG	3 cut(s)	606, 1222, 1424
BsaWI	WCCGGW	1 cut(s)	872
BsaXI	ACNNNNNCTCC	6 cut(s)	83, 113, 317, 347, 458, 488
Bsc4I	CCNNNNNNNGG	3 cut(s)	535, 1095, 1500
Bse118I	RCCGGY	3 cut(s)	356, 452, 757
Bse1I	ACTGG	4 cut(s)	508, 773, 1519, 1934
Bse3DI	GCAATG	3 cut(s)	1528, 1560, 1815
BseBI	CCWGG	1 cut(s)	608
BseDI	CCNNGG	3 cut(s)	606, 1222, 1424
BseGI	GGATG	4 cut(s)	729, 1036, 1273, 1612
BseLI	CCNNNNNNNGG	3 cut(s)	535, 1095, 1500
BseMI	GCAATG	3 cut(s)	1528, 1560, 1815
BseMII	CTCAG	4 cut(s)	139, 204, 1753, 1794
BseNI	ACTGG	4 cut(s)	508, 773, 1519, 1934
BseRI	GAGGAG	6 cut(s)	88, 131, 322, 397, 971, 1208
BseSI	GKGCMC	2 cut(s)	596, 1437
BseX3I	CGGCCG	1 cut(s)	650
BseXI	GCAGC	5 cut(s)	116, 793, 1311, 1353, 1464
BseYI	CCCAGC	3 cut(s)	320, 596, 862
BsgI	GTGCAG	1 cut(s)	792
Bsh1285I	CGRYCG	2 cut(s)	653, 672
BshFI	GGCC	6 cut(s)	360, 652, 704, 1088, 1423, 1849
BsiEI	CGRYCG	2 cut(s)	653, 672
BsiHKAI	GWGCWC	6 cut(s)	173, 522, 1200, 1416, 1437, 1641
BsiSI	CCGG	5 cut(s)	357, 453, 649, 758, 873
BsiWI	CGTACG	1 cut(s)	639
BslFI	GGGAC	2 cut(s)	359, 382
BslI	CCNNNNNNNGG	3 cut(s)	535, 1095, 1500
BsmAI	GTCTC	5 cut(s)	100, 276, 909, 1400, 1912
BsmBI	CGTCTC	3 cut(s)	100, 909, 1912
BsmFI	GGGAC	2 cut(s)	359, 382
BsmI	GAATGC	2 cut(s)	346, 1189
BsnI	GGCC	6 cut(s)	360, 652, 704, 1088, 1423, 1849
Bso31I	GGTCTC	2 cut(s)	276, 1400
Bsp119I	TTCGAA	1 cut(s)	1472
Bsp1286I	GDGCHC	8 cut(s)	173, 247, 522, 596, 1200, 1416, 1437, 1641
Bsp1407I	TGTACA	1 cut(s)	972
Bsp143I	GATC	6 cut(s)	309, 471, 532, 840, 1834, 1919
Bsp1720I	GCTNAGC	1 cut(s)	190
Bsp19I	CCATGG	1 cut(s)	1222
BspACI	CCGC	8 cut(s)	12, 102, 145, 210, 273, 301, 567, 1028
BspANI	GGCC	6 cut(s)	360, 652, 704, 1088, 1423, 1849
BspCNI	CTCAG	4 cut(s)	138, 203, 1752, 1793
BspHI	TCATGA	1 cut(s)	306
BspLI	GGNNCC	4 cut(s)	622, 1126, 1141, 1929
BspMI	ACCTGC	1 cut(s)	194
BspOI	GCTAGC	1 cut(s)	1508
BspPI	GGATC	2 cut(s)	1829, 1927
BspT104I	TTCGAA	1 cut(s)	1472
BspTNI	GGTCTC	2 cut(s)	276, 1400
BsrDI	GCAATG	3 cut(s)	1528, 1560, 1815
BsrFI	RCCGGY	3 cut(s)	356, 452, 757
BsrGI	TGTACA	1 cut(s)	972
BsrI	ACTGG	4 cut(s)	508, 773, 1519, 1934
BssAI	RCCGGY	3 cut(s)	356, 452, 757
BssECI	CCNNGG	3 cut(s)	606, 1222, 1424
BssMI	GATC	6 cut(s)	309, 471, 532, 840, 1834, 1919
BssNI	GRCGYC	2 cut(s)	561, 1905
BssSI	CACGAG	1 cut(s)	1409
BssT1I	CCWWGG	1 cut(s)	1222
Bst2BI	CACGAG	1 cut(s)	1409
Bst2UI	CCWGG	1 cut(s)	608
Bst4CI	ACNGT	6 cut(s)	673, 748, 793, 813, 1394, 1810
Bst6I	CTCTTC	4 cut(s)	293, 374, 1068, 1716
BstACI	GRCGYC	2 cut(s)	561, 1905
BstAUI	TGTACA	1 cut(s)	972
BstBI	TTCGAA	1 cut(s)	1472
BstC8I	GCNNGC	7 cut(s)	358, 454, 696, 766, 852, 983, 1506
BstDEI	CTNAG	5 cut(s)	125, 190, 1465, 1739, 1780
BstDSI	CCRYGG	1 cut(s)	1222
BstF5I	GGATG	4 cut(s)	729, 1036, 1273, 1612
BstKTI	GATC	6 cut(s)	312, 474, 535, 843, 1837, 1922
BstMAI	GTCTC	5 cut(s)	100, 276, 909, 1400, 1912
BstMBI	GATC	6 cut(s)	309, 471, 532, 840, 1834, 1919
BstMCI	CGRYCG	2 cut(s)	653, 672
BstMWI	GCNNNNNNNGC	2 cut(s)	1420, 1490
BstNI	CCWGG	1 cut(s)	608
BstSCI	CCNGG	1 cut(s)	606
BstSLI	GKGCMC	2 cut(s)	596, 1437
BstV1I	GCAGC	5 cut(s)	116, 793, 1311, 1353, 1464
BstV2I	GAAGAC	2 cut(s)	827, 1364
BstX2I	RGATCY	2 cut(s)	471, 1834
BstYI	RGATCY	2 cut(s)	471, 1834
BstZI	CGGCCG	1 cut(s)	650
BsuI	GTATCC	1 cut(s)	173
BsuRI	GGCC	6 cut(s)	360, 652, 704, 1088, 1423, 1849
BtgI	CCRYGG	1 cut(s)	1222
BtsCI	GGATG	4 cut(s)	729, 1036, 1273, 1612
BtsIMutI	CAGTG	3 cut(s)	789, 1755, 1788
BveI	ACCTGC	1 cut(s)	194
Cac8I	GCNNGC	7 cut(s)	358, 454, 696, 766, 852, 983, 1506
CciI	TCATGA	1 cut(s)	306
Cfr10I	RCCGGY	3 cut(s)	356, 452, 757
Cfr13I	GGNCC	1 cut(s)	1125
CseI	GACGC	1 cut(s)	550
Csp6I	GTAC	5 cut(s)	238, 640, 776, 973, 1054
CspCI	CAANNNNNGTGG	2 cut(s)	1839, 1874
CviAII	CATG	9 cut(s)	149, 219, 307, 384, 1223, 1320, 1328, 1477, 1776
CviQI	GTAC	5 cut(s)	238, 640, 776, 973, 1054
DdeI	CTNAG	5 cut(s)	125, 190, 1465, 1739, 1780
DpnI	GATC	6 cut(s)	311, 473, 534, 842, 1836, 1921
DpnII	GATC	6 cut(s)	309, 471, 532, 840, 1834, 1919
DraI	TTTAAA	1 cut(s)	717
EaeI	YGGCCR	2 cut(s)	358, 650
EagI	CGGCCG	1 cut(s)	650
Eam1104I	CTCTTC	4 cut(s)	293, 374, 1068, 1716
EarI	CTCTTC	4 cut(s)	293, 374, 1068, 1716
EciI	GGCGGA	3 cut(s)	91, 134, 1043
Ecl136II	GAGCTC	3 cut(s)	520, 1198, 1639
EclXI	CGGCCG	1 cut(s)	650
Eco130I	CCWWGG	1 cut(s)	1222
Eco24I	GRGCYC	4 cut(s)	247, 522, 1200, 1641
Eco31I	GGTCTC	2 cut(s)	276, 1400
Eco47I	GGWCC	1 cut(s)	1125
Eco52I	CGGCCG	1 cut(s)	650
Eco53kI	GAGCTC	3 cut(s)	520, 1198, 1639
Eco57I	CTGAAG	2 cut(s)	947, 1779
EcoICRI	GAGCTC	3 cut(s)	520, 1198, 1639
EcoRII	CCWGG	1 cut(s)	606
EcoT14I	CCWWGG	1 cut(s)	1222
EcoT38I	GRGCYC	4 cut(s)	247, 522, 1200, 1641
ErhI	CCWWGG	1 cut(s)	1222
Esp3I	CGTCTC	3 cut(s)	100, 909, 1912
FaeI	CATG	9 cut(s)	152, 222, 310, 387, 1226, 1323, 1331, 1480, 1779
FaqI	GGGAC	2 cut(s)	359, 382
FatI	CATG	9 cut(s)	148, 218, 306, 383, 1222, 1319, 1327, 1476, 1775
FauI	CCCGC	1 cut(s)	19
FbaI	TGATCA	1 cut(s)	840
Fnu4HI	GCNGC	7 cut(s)	130, 273, 301, 807, 1325, 1367, 1453
FokI	GGATG	4 cut(s)	716, 1043, 1280, 1619
FriOI	GRGCYC	4 cut(s)	247, 522, 1200, 1641
Fsp4HI	GCNGC	7 cut(s)	130, 273, 301, 807, 1325, 1367, 1453
FspBI	CTAG	4 cut(s)	1241, 1419, 1505, 1577
GluI	GCNGC	7 cut(s)	130, 273, 301, 807, 1325, 1367, 1453
GsaI	CCCAGC	3 cut(s)	324, 600, 866
HaeIII	GGCC	6 cut(s)	360, 652, 704, 1088, 1423, 1849
HapII	CCGG	5 cut(s)	357, 453, 649, 758, 873
HgaI	GACGC	1 cut(s)	550
Hin1I	GRCGYC	2 cut(s)	561, 1905
Hin1II	CATG	9 cut(s)	152, 222, 310, 387, 1226, 1323, 1331, 1480, 1779
HincII	GTYRAC	1 cut(s)	1596
HindII	GTYRAC	1 cut(s)	1596
HinfI	GANTC	4 cut(s)	1259, 1271, 1469, 1772
HpaII	CCGG	5 cut(s)	357, 453, 649, 758, 873
HphI	GGTGA	4 cut(s)	433, 490, 556, 1246
Hpy166II	GTNNAC	5 cut(s)	526, 1219, 1435, 1596, 1753
Hpy188III	TCNNGA	7 cut(s)	6, 307, 667, 1168, 1201, 1409, 1447
Hpy8I	GTNNAC	5 cut(s)	526, 1219, 1435, 1596, 1753
Hpy99I	CGWCG	2 cut(s)	518, 1385
HpyCH4III	ACNGT	6 cut(s)	673, 748, 793, 813, 1394, 1810
HpyCH4IV	ACGT	4 cut(s)	93, 642, 1383, 1905
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1420, 1490
HpyF3I	CTNAG	5 cut(s)	125, 190, 1465, 1739, 1780
HpySE526I	ACGT	4 cut(s)	93, 642, 1383, 1905
Hsp92I	GRCGYC	2 cut(s)	561, 1905
Hsp92II	CATG	9 cut(s)	152, 222, 310, 387, 1226, 1323, 1331, 1480, 1779
KroI	GCCGGC	2 cut(s)	356, 452
KroNI	GCCGGC	2 cut(s)	358, 454
Ksp22I	TGATCA	1 cut(s)	840
Kzo9I	GATC	6 cut(s)	309, 471, 532, 840, 1834, 1919
LmnI	GCTCC	4 cut(s)	392, 1145, 1195, 1933
Lsp1109I	GCAGC	5 cut(s)	116, 793, 1311, 1353, 1464
MaeI	CTAG	4 cut(s)	1241, 1419, 1505, 1577
MaeII	ACGT	4 cut(s)	93, 642, 1383, 1905
MaeIII	GTNAC	2 cut(s)	562, 1804
MalI	GATC	6 cut(s)	311, 473, 534, 842, 1836, 1921
MboI	GATC	6 cut(s)	309, 471, 532, 840, 1834, 1919
MfeI	CAATTG	1 cut(s)	855
MflI	RGATCY	2 cut(s)	471, 1834
MhlI	GDGCHC	8 cut(s)	173, 247, 522, 596, 1200, 1416, 1437, 1641
MluCI	AATT	6 cut(s)	625, 855, 867, 1284, 1346, 1495
MlyI	GAGTC	2 cut(s)	1253, 1781
MmeI	TCCRAC	5 cut(s)	339, 592, 972, 1334, 1525
MroNI	GCCGGC	2 cut(s)	356, 452
MroXI	GAANNNNTTC	1 cut(s)	42
MseI	TTAA	2 cut(s)	716, 1146
MslI	CAYNNNNRTG	1 cut(s)	1532
MspA1I	CMGCKG	1 cut(s)	129
MspI	CCGG	5 cut(s)	357, 453, 649, 758, 873
MspR9I	CCNGG	1 cut(s)	608
MunI	CAATTG	1 cut(s)	855
Mva1269I	GAATGC	2 cut(s)	346, 1189
MvaI	CCWGG	1 cut(s)	608
MwoI	GCNNNNNNNGC	2 cut(s)	1420, 1490
NaeI	GCCGGC	2 cut(s)	358, 454
NcoI	CCATGG	1 cut(s)	1222
NdeII	GATC	6 cut(s)	309, 471, 532, 840, 1834, 1919
NgoMIV	GCCGGC	2 cut(s)	356, 452
NheI	GCTAGC	1 cut(s)	1504
NlaIII	CATG	9 cut(s)	152, 222, 310, 387, 1226, 1323, 1331, 1480, 1779
NlaIV	GGNNCC	4 cut(s)	622, 1126, 1141, 1929
NmeAIII	GCCGAG	1 cut(s)	1449
NmuCI	GTSAC	2 cut(s)	562, 1804
NspV	TTCGAA	1 cut(s)	1472
PagI	TCATGA	1 cut(s)	306
PaqCI	CACCTGC	1 cut(s)	194
PcsI	WCGNNNNNNNCGW	2 cut(s)	998, 1296
PctI	GAATGC	2 cut(s)	346, 1189
PdiI	GCCGGC	2 cut(s)	358, 454
PdmI	GAANNNNTTC	1 cut(s)	42
PfeI	GAWTC	2 cut(s)	1271, 1469
Pfl23II	CGTACG	1 cut(s)	639
PkrI	GCNGC	7 cut(s)	131, 274, 302, 808, 1326, 1368, 1454
PleI	GAGTC	2 cut(s)	1253, 1780
PpsI	GAGTC	2 cut(s)	1253, 1780
PshBI	ATTAAT	1 cut(s)	1146
Psp124BI	GAGCTC	3 cut(s)	522, 1200, 1641
Psp6I	CCWGG	1 cut(s)	606
PspFI	CCCAGC	3 cut(s)	320, 596, 862
PspGI	CCWGG	1 cut(s)	606
PspLI	CGTACG	1 cut(s)	639
PspN4I	GGNNCC	4 cut(s)	622, 1126, 1141, 1929
PspPI	GGNCC	1 cut(s)	1125
PsuI	RGATCY	2 cut(s)	471, 1834
PvuII	CAGCTG	1 cut(s)	129
RsaI	GTAC	5 cut(s)	239, 641, 777, 974, 1055
RsaNI	GTAC	5 cut(s)	238, 640, 776, 973, 1054
RseI	CAYNNNNRTG	1 cut(s)	1532
SacI	GAGCTC	3 cut(s)	522, 1200, 1641
SaqAI	TTAA	2 cut(s)	716, 1146
SatI	GCNGC	7 cut(s)	130, 273, 301, 807, 1325, 1367, 1453
Sau3AI	GATC	6 cut(s)	309, 471, 532, 840, 1834, 1919
Sau96I	GGNCC	1 cut(s)	1125
ScaI	AGTACT	1 cut(s)	777
SchI	GAGTC	2 cut(s)	1253, 1781
ScrFI	CCNGG	1 cut(s)	608
SduI	GDGCHC	8 cut(s)	173, 247, 522, 596, 1200, 1416, 1437, 1641
SfuI	TTCGAA	1 cut(s)	1472
SinI	GGWCC	1 cut(s)	1125
SmiMI	CAYNNNNRTG	1 cut(s)	1532
SmlI	CTYRAG	4 cut(s)	159, 1199, 1551, 1876
SmoI	CTYRAG	4 cut(s)	159, 1199, 1551, 1876
Sse9I	AATT	6 cut(s)	625, 855, 867, 1284, 1346, 1495
SsiI	CCGC	8 cut(s)	12, 102, 145, 210, 273, 301, 567, 1028
SspI	AATATT	1 cut(s)	1459
SspMI	CTAG	4 cut(s)	1241, 1419, 1505, 1577
SstI	GAGCTC	3 cut(s)	522, 1200, 1641
StyD4I	CCNGG	1 cut(s)	606
StyI	CCWWGG	1 cut(s)	1222
TaaI	ACNGT	6 cut(s)	673, 748, 793, 813, 1394, 1810
TaiI	ACGT	4 cut(s)	96, 645, 1386, 1908
TaqI	TCGA	7 cut(s)	5, 264, 516, 668, 1299, 1380, 1472
TasI	AATT	6 cut(s)	625, 855, 867, 1284, 1346, 1495
TatI	WGTACW	3 cut(s)	775, 972, 1053
TauI	GCSGC	2 cut(s)	275, 303
TfiI	GAWTC	2 cut(s)	1271, 1469
Tru1I	TTAA	2 cut(s)	716, 1146
Tru9I	TTAA	2 cut(s)	716, 1146
TscAI	CASTG	3 cut(s)	796, 1762, 1788
TseFI	GTSAC	2 cut(s)	562, 1804
TseI	GCWGC	5 cut(s)	129, 806, 1324, 1366, 1452
Tsp45I	GTSAC	2 cut(s)	562, 1804
TspDTI	ATGAA	6 cut(s)	669, 1190, 1308, 1344, 1356, 1680
TspGWI	ACGGA	4 cut(s)	502, 633, 933, 1117
TspRI	CASTG	3 cut(s)	796, 1762, 1788
VneI	GTGCAC	1 cut(s)	1433
VpaK11BI	GGWCC	1 cut(s)	1125
VspI	ATTAAT	1 cut(s)	1146
XmnI	GAANNNNTTC	1 cut(s)	42
XspI	CTAG	4 cut(s)	1241, 1419, 1505, 1577
ZraI	GACGTC	1 cut(s)	1906
ZrmI	AGTACT	1 cut(s)	777

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.