Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0006402

Physical Location & Seq

Genomic Coordinates Forward (+)

3590036 .. 3593770

Gene Structure 3735 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG021900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGAGAAGCTCCAAACCCAAGTGTCTCTTTTCTCTCTTCCTGTTCTTCCTATGCTTCCATCTCCTTCTTCACCTTTCACATTCACAAGCTCAAGAGCCAACAACTGAAGGCTATACCTGCTCAATCAATGAGACCACCACCAATCCATGCCAAGCCTATGCCTATTACAGAGCCACGGCTCCTAACTTTCTTGACCTGGCCTCCATAGCTGACCTCTTCTCAGTTAGCCGCCTCATGATCTCCAAACCCAGCAACATCTCTTCCCCAACTTCACCTCTGATCCAAGACCAAGCCCTGTTTGTTCCTCTATCTTGTTCCTGCAACTCAGTCAACACCAGCACGACCATCTCCTATGCCAATCTCTCATACACAATCAATCCAAATGACACATTTTACCAAGTCTCCACCTACAGCTTCCTAAACCTCACAACCTACCAATCTGTGGAGCTTGTGAACCCTACTCTTGTAGCCACCAACCTTACAATTGGGGTAACTGCATATTTCCCAATCTTTTGCAAGTGCCCCACCAAAACCCAGTCGCAAAACAACGTCAGTTATCTAGTCTCCTATGTGTTCCAACCTTCTGATAACTTGTCAACAGTTGCTTCAAGGTTTGGGGTCCAAACAAACTCTATAGTTGAAGTTAATGGCAATAATACTCAGCCTTTTGATACCATTTTCATTCCAGTGACTCAGCTTCCTGAGCTATCACAACCTACTGTTTTTCCTTCACCTCCTTCACCTCCTGGGAATAAGACTGAGAGGAAAGGAGTGATTACAGGGTTGGCAGTTGGGTTGGGGATTACTGGGTTTTTGCTGATCTTGGCTGTGGGAGTTTTGATTTTTGGAGGTGGGTTGGTGAAGAAGAGGAGAGGTATAAGAGGAGATGAAGAGAGGAATCTGAATCTATATAAGAATGAGAAGGGAGATAAGAGGGCGAAGGAAATGGAAGTGAGTTTGATGGCTGATGTTTCAGATTGCTTGGACAAGTACAGAGTGTTTGGTATTGAAGAACTCAGAGAAGCTACTAATGGGTTTGGAGAGAATTGCTTGATTGAAGGGTCTGTTTACAAAGGAAATATTAATGGGGAGGTCTATGCCATCAAGAAGATGAAGTGGAACGCCTGTGAGGAGCTCAAGATCTTACAGAAGGTAAACCATGGCAATTTGGTGAAGCTAGAAGGCTTCTGCATAGACCCGGAGGATGCAAATTGCTATCTAGTTTACGAGTATGTCGAAAATGGCTCTCTCTATTCATGGCTGCATGAAAACCCGAATGAAAAGTTAAGTTGGAAGACAAGGCTGCATATTGCTGCTGATGTCGCAAATGGTCTGCAATATATTCATGAGCACACTAGGCCAAGGGTCGTGCACAAAGACATAAAGAGCAGTAATATTCTCTTGGACTCCAACATGAGAGCCAAAATAGCCAATTTCGGGCTTGCAAAGTCTGGTTGCAATGCCATAACAATGCACATTGTTGGAACTCAAGGTTATATTGCCCCTGAGTATCTAACTGATGGGGTGGTGTCAACAAAAATGGATGTGTTCTCCTTTGGGGTAGTTTTGCTAGAGCTTCTTTCAGGGAAGGAGGCCATTGATGAAGCTGGAAATATTCTGTGGGCTAGCGCCGGTAGGATTTTGGAGGGAAGTGAGGAACAGAAGGCAGAGAAACTAAAGCAGTGGGTGGACAAGCAGCTTTTCCTTGAGTCATGCTCAATGGAGAGCATAGTGAATGTTGCGACCGTTGCCATTGCCTGTTTGCACAAAGATCCTTCTAAAAGGCCAAGTATGGTGGACATTGTTTATGCCTTGTGTAAGAGCGATGAATTGTTTTTCGATATCTCAGACGATGGATCATCAGCTCCCCCAGTAAGAGCACGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase

Protein Analysis

628

Amino Acids

69.4

Weight (kDa)

5.86

Isoelectric Point (pI)

40.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	50 - 107	1.1e-17	NFP/LYK LysM1 domain
LysM2_NFP	PF23457	117 - 171	1.4e-19	NFP LysM2 domain
LysM3_NFP	PF23462	186 - 230	6.7e-08	NFP LysM3 domain
Pkinase	PF00069	355 - 602	6.6e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	372 - 604	3.4e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006402)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02221
malus_domestica	MD13G1203700.v1.1 MD13G1203800.v1.1 MD16G1205900.v1.1
prunus_persica	Prupe.1G027000_v2.0.a1 Prupe.1G027000_v2.0.a1 Prupe.1G027000_v2.0.a1
pyrus_communis	pycom13g17710 pycom16g17320
rosa_chinensis	RchiOBHm_Chr4g0389541
rosa_laevigata	RLG00000009973 RLG00000009975
rosa_multiflora	Rmu_co8296341.1_g000001 Rmu_co8368025.1_g000001 Rmu_sc0002498.1_g000001 Rmu_sc0003347.1_g000004 Rmu_sc0003582.1_g000008 Rmu_sc0016342.1_g000011
rosa_roxburghii	Rroxscaffold_5G00335500
rosa_rugosa	Rorug03G0323800
rosa_samantha	Rh4AG028200 Rh4BG021400 Rh4CG030100 Rh4DG021900
rosa_wichuraiana	Rw0G017330 Rw4G002050 Rw4G002090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	125
AccB7I	CCANNNNNTGG	1 cut(s)	442
AciI	CCGC	1 cut(s)	229
AclWI	GGATC	3 cut(s)	274, 1766, 1864
AcuI	CTGAAG	1 cut(s)	126
AfaI	GTAC	1 cut(s)	992
AfiI	CCNNNNNNNGG	2 cut(s)	442, 1437
AgsI	TTSAA	4 cut(s)	609, 641, 1010, 1058
AjnI	CCWGG	2 cut(s)	195, 745
Alw21I	GWGCWC	4 cut(s)	1137, 1353, 1374, 1882
Alw26I	GTCTC	4 cut(s)	29, 125, 406, 568
Alw44I	GTGCAC	1 cut(s)	1370
AlwI	GGATC	3 cut(s)	274, 1766, 1864
AoxI	GGCC	4 cut(s)	198, 1358, 1593, 1784
ApaLI	GTGCAC	1 cut(s)	1370
ApeKI	GCWGC	4 cut(s)	1261, 1303, 1313, 1696
AseI	ATTAAT	1 cut(s)	1083
AspLEI	GCGC	1 cut(s)	1631
AspS9I	GGNCC	1 cut(s)	619
AsuC2I	CCSGG	1 cut(s)	1199
AsuHPI	GGTGA	6 cut(s)	62, 264, 723, 732, 871, 1183
AsuNHI	GCTAGC	1 cut(s)	1625
AvaII	GGWCC	1 cut(s)	619
BaeGI	GKGCMC	2 cut(s)	524, 1374
BanII	GRGCYC	1 cut(s)	1137
BbsI	GAAGAC	1 cut(s)	1301
Bbv12I	GWGCWC	4 cut(s)	1137, 1353, 1374, 1882
BbvI	GCAGC	4 cut(s)	1248, 1290, 1300, 1708
BccI	CCATC	6 cut(s)	66, 353, 955, 1109, 1514, 1847
BceAI	ACGGC	1 cut(s)	192
BciT130I	CCWGG	2 cut(s)	197, 747
BcnI	CCSGG	1 cut(s)	1199
BcoDI	GTCTC	4 cut(s)	29, 125, 406, 568
BfaI	CTAG	6 cut(s)	560, 1178, 1220, 1356, 1571, 1626
BfmI	CTRYAG	2 cut(s)	409, 633
BfoI	RGCGCY	1 cut(s)	1632
BfuAI	ACCTGC	1 cut(s)	125
BglII	AGATCT	1 cut(s)	1140
BisI	GCNGC	5 cut(s)	229, 1262, 1304, 1314, 1697
BlsI	GCNGC	5 cut(s)	230, 1263, 1305, 1315, 1698
Bme1390I	CCNGG	3 cut(s)	197, 747, 1199
Bme18I	GGWCC	1 cut(s)	619
BmgT120I	GGNCC	1 cut(s)	619
BmiI	GGNNCC	2 cut(s)	180, 620
BmrFI	CCNGG	3 cut(s)	197, 747, 1199
BmrI	ACTGGG	3 cut(s)	529, 816, 1865
BmsI	GCATC	1 cut(s)	1195
BmtI	GCTAGC	1 cut(s)	1629
BmuI	ACTGGG	3 cut(s)	529, 816, 1865
BpiI	GAAGAC	1 cut(s)	1301
BplI	GAGNNNNNCTC	2 cut(s)	1700, 1732
Bpu10I	CCTNAGC	1 cut(s)	702
BpuEI	CTTGAG	4 cut(s)	75, 1121, 1473, 1727
BpuMI	CCSGG	1 cut(s)	1199
BsaI	GGTCTC	1 cut(s)	125
BsaJI	CCNNGG	4 cut(s)	174, 746, 1159, 1361
BsaXI	ACNNNNNCTCC	4 cut(s)	185, 215, 386, 416
Bsc4I	CCNNNNNNNGG	2 cut(s)	442, 1437
Bse118I	RCCGGY	1 cut(s)	1631
Bse1I	ACTGG	4 cut(s)	535, 686, 811, 1871
Bse3DI	GCAATG	2 cut(s)	1465, 1752
BseBI	CCWGG	2 cut(s)	197, 747
BseDI	CCNNGG	4 cut(s)	174, 746, 1159, 1361
BseGI	GGATG	2 cut(s)	1210, 1549
BseLI	CCNNNNNNNGG	2 cut(s)	442, 1437
BseMI	GCAATG	2 cut(s)	1465, 1752
BseMII	CTCAG	9 cut(s)	234, 339, 674, 693, 707, 750, 1030, 1497, 1860
BseNI	ACTGG	4 cut(s)	535, 686, 811, 1871
BseRI	GAGGAG	3 cut(s)	883, 897, 1145
BseSI	GKGCMC	2 cut(s)	524, 1374
BseXI	GCAGC	4 cut(s)	1248, 1290, 1300, 1708
BseYI	CCCAGC	1 cut(s)	248
Bsh1285I	CGRYCG	1 cut(s)	1746
BshFI	GGCC	4 cut(s)	200, 1360, 1595, 1786
BsiEI	CGRYCG	1 cut(s)	1746
BsiHKAI	GWGCWC	4 cut(s)	1137, 1353, 1374, 1882
BsiSI	CCGG	2 cut(s)	1199, 1632
BslI	CCNNNNNNNGG	2 cut(s)	442, 1437
BsmAI	GTCTC	4 cut(s)	29, 125, 406, 568
BsnI	GGCC	4 cut(s)	200, 1360, 1595, 1786
Bso31I	GGTCTC	1 cut(s)	125
Bsp1286I	GDGCHC	5 cut(s)	524, 1137, 1353, 1374, 1882
Bsp143I	GATC	6 cut(s)	237, 279, 819, 1140, 1771, 1856
Bsp19I	CCATGG	1 cut(s)	1159
BspACI	CCGC	1 cut(s)	229
BspANI	GGCC	4 cut(s)	200, 1360, 1595, 1786
BspCNI	CTCAG	9 cut(s)	233, 338, 673, 694, 706, 751, 1029, 1498, 1859
BspHI	TCATGA	2 cut(s)	234, 1345
BspLI	GGNNCC	2 cut(s)	180, 620
BspMI	ACCTGC	1 cut(s)	125
BspOI	GCTAGC	1 cut(s)	1629
BspPI	GGATC	3 cut(s)	274, 1766, 1864
BspTNI	GGTCTC	1 cut(s)	125
BsrDI	GCAATG	2 cut(s)	1465, 1752
BsrFI	RCCGGY	1 cut(s)	1631
BsrI	ACTGG	4 cut(s)	535, 686, 811, 1871
BssAI	RCCGGY	1 cut(s)	1631
BssECI	CCNNGG	4 cut(s)	174, 746, 1159, 1361
BssMI	GATC	6 cut(s)	237, 279, 819, 1140, 1771, 1856
BssT1I	CCWWGG	2 cut(s)	1159, 1361
Bst2UI	CCWGG	2 cut(s)	197, 747
Bst4CI	ACNGT	4 cut(s)	601, 721, 1747, 1884
Bst6I	CTCTTC	5 cut(s)	41, 221, 265, 860, 885
BstC8I	GCNNGC	2 cut(s)	1443, 1627
BstDEI	CTNAG	9 cut(s)	220, 325, 660, 693, 702, 759, 1016, 1506, 1846
BstDSI	CCRYGG	2 cut(s)	174, 1159
BstF5I	GGATG	2 cut(s)	1210, 1549
BstH2I	RGCGCY	1 cut(s)	1632
BstHHI	GCGC	1 cut(s)	1631
BstKTI	GATC	6 cut(s)	240, 282, 822, 1143, 1774, 1859
BstMAI	GTCTC	4 cut(s)	29, 125, 406, 568
BstMBI	GATC	6 cut(s)	237, 279, 819, 1140, 1771, 1856
BstMCI	CGRYCG	1 cut(s)	1746
BstMWI	GCNNNNNNNGC	7 cut(s)	117, 206, 703, 1322, 1357, 1427, 1748
BstNI	CCWGG	2 cut(s)	197, 747
BstSCI	CCNGG	3 cut(s)	195, 745, 1197
BstSFI	CTRYAG	2 cut(s)	409, 633
BstSLI	GKGCMC	2 cut(s)	524, 1374
BstV1I	GCAGC	4 cut(s)	1248, 1290, 1300, 1708
BstV2I	GAAGAC	1 cut(s)	1301
BstX2I	RGATCY	2 cut(s)	1140, 1771
BstYI	RGATCY	2 cut(s)	1140, 1771
BsuRI	GGCC	4 cut(s)	200, 1360, 1595, 1786
BtgI	CCRYGG	2 cut(s)	174, 1159
BtgZI	GCGATG	1 cut(s)	1839
BtsCI	GGATG	2 cut(s)	1210, 1549
BtsI	GCAGTG	1 cut(s)	1688
BtsIMutI	CAGTG	2 cut(s)	693, 1688
BveI	ACCTGC	1 cut(s)	125
Cac8I	GCNNGC	2 cut(s)	1443, 1627
CciI	TCATGA	2 cut(s)	234, 1345
CfoI	GCGC	1 cut(s)	1631
Cfr10I	RCCGGY	1 cut(s)	1631
Cfr13I	GGNCC	1 cut(s)	619
Csp6I	GTAC	1 cut(s)	991
CspCI	CAANNNNNGTGG	2 cut(s)	1776, 1811
CviAII	CATG	8 cut(s)	147, 235, 1160, 1257, 1265, 1346, 1414, 1713
CviQI	GTAC	1 cut(s)	991
DdeI	CTNAG	9 cut(s)	220, 325, 660, 693, 702, 759, 1016, 1506, 1846
DpnI	GATC	6 cut(s)	239, 281, 821, 1142, 1773, 1858
DpnII	GATC	6 cut(s)	237, 279, 819, 1140, 1771, 1856
Eam1104I	CTCTTC	5 cut(s)	41, 221, 265, 860, 885
EarI	CTCTTC	5 cut(s)	41, 221, 265, 860, 885
Ecl136II	GAGCTC	1 cut(s)	1135
Eco130I	CCWWGG	2 cut(s)	1159, 1361
Eco24I	GRGCYC	1 cut(s)	1137
Eco31I	GGTCTC	1 cut(s)	125
Eco32I	GATATC	1 cut(s)	1843
Eco47I	GGWCC	1 cut(s)	619
Eco53kI	GAGCTC	1 cut(s)	1135
Eco57I	CTGAAG	1 cut(s)	126
EcoICRI	GAGCTC	1 cut(s)	1135
EcoRII	CCWGG	2 cut(s)	195, 745
EcoRV	GATATC	1 cut(s)	1843
EcoT14I	CCWWGG	2 cut(s)	1159, 1361
EcoT38I	GRGCYC	1 cut(s)	1137
ErhI	CCWWGG	2 cut(s)	1159, 1361
FaeI	CATG	8 cut(s)	150, 238, 1163, 1260, 1268, 1349, 1417, 1716
FalI	AAGNNNNNCTT	2 cut(s)	11, 43
FatI	CATG	8 cut(s)	146, 234, 1159, 1256, 1264, 1345, 1413, 1712
Fnu4HI	GCNGC	5 cut(s)	229, 1262, 1304, 1314, 1697
FokI	GGATG	2 cut(s)	1217, 1556
FriOI	GRGCYC	1 cut(s)	1137
Fsp4HI	GCNGC	5 cut(s)	229, 1262, 1304, 1314, 1697
FspBI	CTAG	6 cut(s)	560, 1178, 1220, 1356, 1571, 1626
GlaI	GCGC	1 cut(s)	1630
GluI	GCNGC	5 cut(s)	229, 1262, 1304, 1314, 1697
GsaI	CCCAGC	1 cut(s)	252
HaeII	RGCGCY	1 cut(s)	1632
HaeIII	GGCC	4 cut(s)	200, 1360, 1595, 1786
HapII	CCGG	2 cut(s)	1199, 1632
HhaI	GCGC	1 cut(s)	1631
Hin1II	CATG	8 cut(s)	150, 238, 1163, 1260, 1268, 1349, 1417, 1716
Hin6I	GCGC	1 cut(s)	1629
HinP1I	GCGC	1 cut(s)	1629
HincII	GTYRAC	3 cut(s)	331, 597, 1533
HindII	GTYRAC	3 cut(s)	331, 597, 1533
HinfI	GANTC	5 cut(s)	691, 898, 904, 1406, 1709
HpaII	CCGG	2 cut(s)	1199, 1632
HphI	GGTGA	6 cut(s)	62, 264, 723, 732, 871, 1183
Hpy188I	TCNGA	6 cut(s)	279, 586, 903, 976, 1019, 1849
Hpy188III	TCNNGA	7 cut(s)	92, 191, 235, 701, 1105, 1138, 1346
HpyCH4III	ACNGT	4 cut(s)	601, 721, 1747, 1884
HpyCH4IV	ACGT	1 cut(s)	549
HpyF10VI	GCNNNNNNNGC	7 cut(s)	117, 206, 703, 1322, 1357, 1427, 1748
HpyF3I	CTNAG	9 cut(s)	220, 325, 660, 693, 702, 759, 1016, 1506, 1846
HpySE526I	ACGT	1 cut(s)	549
Hsp92II	CATG	8 cut(s)	150, 238, 1163, 1260, 1268, 1349, 1417, 1716
HspAI	GCGC	1 cut(s)	1629
Kzo9I	GATC	6 cut(s)	237, 279, 819, 1140, 1771, 1856
LmnI	GCTCC	5 cut(s)	14, 184, 445, 1132, 1870
Lsp1109I	GCAGC	4 cut(s)	1248, 1290, 1300, 1708
LweI	GCATC	1 cut(s)	1195
MaeI	CTAG	6 cut(s)	560, 1178, 1220, 1356, 1571, 1626
MaeII	ACGT	1 cut(s)	549
MaeIII	GTNAC	2 cut(s)	490, 688
MalI	GATC	6 cut(s)	239, 281, 821, 1142, 1773, 1858
MboI	GATC	6 cut(s)	237, 279, 819, 1140, 1771, 1856
MfeI	CAATTG	1 cut(s)	483
MflI	RGATCY	2 cut(s)	1140, 1771
MhlI	GDGCHC	5 cut(s)	524, 1137, 1353, 1374, 1882
MluCI	AATT	6 cut(s)	483, 1045, 1165, 1210, 1432, 1829
MlyI	GAGTC	3 cut(s)	685, 1400, 1718
MmeI	TCCRAC	4 cut(s)	601, 1271, 1434, 1462
MseI	TTAA	3 cut(s)	645, 1083, 1286
MslI	CAYNNNNRTG	2 cut(s)	686, 1469
MspI	CCGG	2 cut(s)	1199, 1632
MspR9I	CCNGG	3 cut(s)	197, 747, 1199
MunI	CAATTG	1 cut(s)	483
MvaI	CCWGG	2 cut(s)	197, 747
MwoI	GCNNNNNNNGC	7 cut(s)	117, 206, 703, 1322, 1357, 1427, 1748
NciI	CCSGG	1 cut(s)	1199
NcoI	CCATGG	1 cut(s)	1159
NdeII	GATC	6 cut(s)	237, 279, 819, 1140, 1771, 1856
NheI	GCTAGC	1 cut(s)	1625
NlaIII	CATG	8 cut(s)	150, 238, 1163, 1260, 1268, 1349, 1417, 1716
NlaIV	GGNNCC	2 cut(s)	180, 620
NmuCI	GTSAC	1 cut(s)	688
PagI	TCATGA	2 cut(s)	234, 1345
PcsI	WCGNNNNNNNCGW	1 cut(s)	1233
PfeI	GAWTC	2 cut(s)	898, 904
PflMI	CCANNNNNTGG	1 cut(s)	442
PkrI	GCNGC	5 cut(s)	230, 1263, 1305, 1315, 1698
PleI	GAGTC	3 cut(s)	685, 1400, 1717
PpsI	GAGTC	3 cut(s)	685, 1400, 1717
PshBI	ATTAAT	1 cut(s)	1083
Psp124BI	GAGCTC	1 cut(s)	1137
Psp6I	CCWGG	2 cut(s)	195, 745
PspFI	CCCAGC	1 cut(s)	248
PspGI	CCWGG	2 cut(s)	195, 745
PspN4I	GGNNCC	2 cut(s)	180, 620
PspPI	GGNCC	1 cut(s)	619
PsuI	RGATCY	2 cut(s)	1140, 1771
RsaI	GTAC	1 cut(s)	992
RsaNI	GTAC	1 cut(s)	991
RseI	CAYNNNNRTG	2 cut(s)	686, 1469
SacI	GAGCTC	1 cut(s)	1137
SaqAI	TTAA	3 cut(s)	645, 1083, 1286
SatI	GCNGC	5 cut(s)	229, 1262, 1304, 1314, 1697
Sau3AI	GATC	6 cut(s)	237, 279, 819, 1140, 1771, 1856
Sau96I	GGNCC	1 cut(s)	619
SchI	GAGTC	3 cut(s)	685, 1400, 1718
ScrFI	CCNGG	3 cut(s)	197, 747, 1199
SduI	GDGCHC	5 cut(s)	524, 1137, 1353, 1374, 1882
SfaNI	GCATC	1 cut(s)	1195
SfcI	CTRYAG	2 cut(s)	409, 633
SinI	GGWCC	1 cut(s)	619
SmiMI	CAYNNNNRTG	2 cut(s)	686, 1469
SmlI	CTYRAG	4 cut(s)	90, 1136, 1488, 1706
SmoI	CTYRAG	4 cut(s)	90, 1136, 1488, 1706
Sse9I	AATT	6 cut(s)	483, 1045, 1165, 1210, 1432, 1829
SsiI	CCGC	1 cut(s)	229
SspI	AATATT	3 cut(s)	1081, 1396, 1615
SspMI	CTAG	6 cut(s)	560, 1178, 1220, 1356, 1571, 1626
SstI	GAGCTC	1 cut(s)	1137
StyD4I	CCNGG	3 cut(s)	195, 745, 1197
StyI	CCWWGG	2 cut(s)	1159, 1361
TaaI	ACNGT	4 cut(s)	601, 721, 1747, 1884
TaiI	ACGT	1 cut(s)	552
TaqI	TCGA	2 cut(s)	1236, 1839
TasI	AATT	6 cut(s)	483, 1045, 1165, 1210, 1432, 1829
TatI	WGTACW	1 cut(s)	990
TauI	GCSGC	1 cut(s)	231
TfiI	GAWTC	2 cut(s)	898, 904
Tru1I	TTAA	3 cut(s)	645, 1083, 1286
Tru9I	TTAA	3 cut(s)	645, 1083, 1286
TscAI	CASTG	2 cut(s)	693, 1688
TseFI	GTSAC	1 cut(s)	688
TseI	GCWGC	4 cut(s)	1261, 1303, 1313, 1696
Tsp45I	GTSAC	1 cut(s)	688
TspDTI	ATGAA	9 cut(s)	670, 903, 1127, 1245, 1281, 1293, 1334, 1617, 1842
TspRI	CASTG	2 cut(s)	693, 1688
Van91I	CCANNNNNTGG	1 cut(s)	442
VneI	GTGCAC	1 cut(s)	1370
VpaK11BI	GGWCC	1 cut(s)	619
VspI	ATTAAT	1 cut(s)	1083
XspI	CTAG	6 cut(s)	560, 1178, 1220, 1356, 1571, 1626

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.