Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0006402

Physical Location & Seq

Genomic Coordinates Forward (+)

5712008 .. 5723670

Gene Structure 11663 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG028200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2799 bp

ATGAGAAGCTCCAAACCCAATTGTCTCTTTTCTCTCTTCCTGTTCTTCCTATGCTTCCATCTCCTTCTTCACCTTTCACATTCACAAGTTCAAGAGCCATCGACTGAAGGCTATACCTGCTCAATCAATGAGACCACCACCAATCCATGCCAAGCCTATGCCTATTACAGAGCCTCGGCTCCTAACTTTCTTGACCTGGCCTCCATAGCTGACCTCTTCTCAGTTAGCCGCCTCATGATCTCCAAACCCAGCAACATCTCTTCCCCAACTTCACCTCTGATCCAAGACCAACCCCTGTTTGTTCCTCTATCTTGTTCCTGCAACTCAGTCAACGCCAGCACGACCATCTCCTATGCCAATCTCTCATACACAATCAATGAAGGTGACACATTTTACCTAGTCTCCACCAACAGCTTCCAAAACCTCACAACCTACCAATCTGTGGAGCTTGTGAACCCTACTCTTGTAGCCACCGACCTTACAATTGGGGTAACTGCATATTTCCCTATCTTTTGCAAGTGCCCCACCAAAACCCAGTCGCAAAACAACGTCAGTTATCTAGTCTCCTATGTGTTCCAACCTTCTGATAACTTGTCAACAGTTGCTTCAAGGTTTGGGGTCCAAACAAACTCTATAGTTGAAGTTAATGGCAATAATACTCAGCCTTTTGATACCATTTTCATTCCAGTGACTCAGCTTCCTGAGCTATCACAACCTACTGTTGTTCCTTCGCCTCCTTCAAATAAGACTGAGAGGAAAGGAGTGATTACAGGGTTGGCAGTTGGGTTGGGGATTACTGGGTTTTTGCTGATCTTGGCTGTCGGAGTTTTGATTTTTGGAGGTGGGTTGGTGAAGAAGAGGAGAGGTACAAGAGGAGATGAAGAGAAGAATCAGAATCTATATAAGAATGAGAAGGGAGATAAGAGGGCGAAGGAAATGGAAGTGAGTTTGATGGCTGATGTTTCAGATTGCTTGGACAAGTACAGAGTGTTTGGTATTGAAGATCTCAGAGAAGCTACTAATGGGTTTGGAGAGAATTGCTTGATTGAAGGGTCTGTTTACAAAGGAAATATTAATGGGGAGGTCTATGCCATCAAGAAGATGAAGTGGAACGCCTGTGAGGAGCTCAAGATCTTACAGAAGGTAAACCATGGCAATTTGGTAAAGCTAGAAGGCTTCTGCATAGACCCAGAGGATGCAAATTGCTATCTAGTTTATGAGTATGTCGAAAATGGCTCTCTCTATTCATGGCTGCATGAAAACCCGAAAGAAAAGTTAAGTTGGAAGACAAGGCTGCATATTGCTGCTGATGTCGCAAATGGTCTGCAATATATTCATGAGCACACTAGGCCAAGGGTCGTGCACAAAGACATAAAGAGCAGTAATATTCTCTTGGACTCCAACATGAGAGCCAAAATAGCCAATTTCGGGCTTGCCAAGTCTGGTTGCAATGCCATAACAATGCACATTGTTGGAACTCAAGGTTATATTGCCCCCGAGTATCTGACTGATGGGGTGGTGTCAACAAAAATGGATGTGTTCTCCTTTGGGGTAGTTTTACTAGAGCTTCTTTCAGGGAAAGAGGCCATTGATGAAGCTGGAAATGTTCTGTGGGCTAGCGCCGGTAGGATTTTGGAGGGAAGTGAGGAACAGAAGGCAGAGAAAGTAAAGCAATGGGTGGACAAGGAGCTTTTCCTTGAGTCATGCTCAATGGAGAGCATAGTGAATGTTGCAACTGTTGCCATTGCCTGTTTGCATAAAGATCCTTCTAAAAGGCCAAGTATGGTGGACATTGTTTATGCCTTGTGTAAGAGCGATGAATTGTTTTTCGATATCTCAGACGATGGATCATCAGCTCCCCCAGTAAGAGCACGGAAATATATGCCCTGCCAGTTTTGGTGTATGAAATCTTCATTTTCACATGGACGTAATTTCATAACTCCAAACAGAGGAAAAGGCAAGGTCAGGTCTCAAAAGACAGGCAATAAACTAGATTCCACTATGTACATAAATGTTGAAGATGACCCGGACACCGAACTTCTTTGGATAGAACAAGTAAAAAGTTCTCAGATTCACCTAGCTAAAGTCTTGATGGGATTGACGTGCTTGTATATTCCACTTAGACTGGCAAAGCTAAATGTCGTTGATACTTTCATTAAGATTGTCCAAGAAAGACTTCTCTGCACTGTTCAAAATTTAGGGGCCGCCACCTTGCCTTTTGCCTGTGCTTCTAATTCTCTGAATAAACCACTGCCTCTTGGATTGGATGTGTCGTTGCCATCATTTCAAGATGTTAGATGGAGCTTTCAACGATTATTGTATCTTTTTAACGTCCAACTTGAGAAAAATGTTGCTACGTTCTTCATAGTGCTCCTGGTAGCATGTTTCTCATTTGTTATCATTGGTGGTTTCCTATTCTTCAAGTTTAGGGGTAGTAAAGAATCTTTGGAGGACTGCTTCTGGGAAGCTTGGGCATGCCTATGTTCATCATCGACACATCTAAAGCAAAGAACACGTATTGAACGTGTTATTGGTTTCGTTCTTGCTATATGGGGCATATTATTTTACTCCCGCTTATTGAGCACAATGACTGAACAGTTCCGGAGTAATATGTACAAGCTCAGAGAAGGGGCACAAATGCAAGTACTGGAGACTGATCACATCATTATTTGTGGAGTGAACAGTCATCTTTCTTTCATACTAAAGCAAATAAACAAGTATCATGAATTTGCTGTCCGCTTAGGAAGCAAAGAATTCTTCTTATGTCTGACTTACCAAGAAAGCAGATGGACAAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase

Protein Analysis

932

Amino Acids

104.38

Weight (kDa)

7.18

Isoelectric Point (pI)

41.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	50 - 107	2.1e-17	NFP/LYK LysM1 domain
LysM2_NFP	PF23457	117 - 171	6.2e-22	NFP LysM2 domain
LysM2_CERK1_LYK3_4_5	PF23472	119 - 164	3.9e-07	LYK3/4/5 LysM2 domain
LysM3_NFP	PF23462	186 - 230	1.1e-07	NFP LysM3 domain
Pkinase	PF00069	352 - 599	1.5e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	369 - 601	2.6e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006402)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02221
malus_domestica	MD13G1203700.v1.1 MD13G1203800.v1.1 MD16G1205900.v1.1
prunus_persica	Prupe.1G027000_v2.0.a1 Prupe.1G027000_v2.0.a1 Prupe.1G027000_v2.0.a1
pyrus_communis	pycom13g17710 pycom16g17320
rosa_chinensis	RchiOBHm_Chr4g0389541
rosa_laevigata	RLG00000009973 RLG00000009975
rosa_multiflora	Rmu_co8296341.1_g000001 Rmu_co8368025.1_g000001 Rmu_sc0002498.1_g000001 Rmu_sc0003347.1_g000004 Rmu_sc0003582.1_g000008 Rmu_sc0016342.1_g000011
rosa_roxburghii	Rroxscaffold_5G00335500
rosa_rugosa	Rorug03G0323800
rosa_samantha	Rh4AG028200 Rh4BG021400 Rh4CG030100 Rh4DG021900
rosa_wichuraiana	Rw0G017330 Rw4G002050 Rw4G002090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	125
AccB7I	CCANNNNNTGG	1 cut(s)	442
AccIII	TCCGGA	1 cut(s)	2601
AciI	CCGC	4 cut(s)	229, 2205, 2572, 2737
AclWI	GGATC	3 cut(s)	274, 1757, 1855
AcsI	RAATTY	3 cut(s)	2194, 2726, 2753
AcuI	CTGAAG	1 cut(s)	126
AfaI	GTAC	5 cut(s)	868, 983, 2006, 2615, 2646
AfiI	CCNNNNNNNGG	3 cut(s)	442, 1428, 1949
AflIII	ACRYGT	2 cut(s)	2513, 2524
AjiI	CACGTC	1 cut(s)	2103
AjnI	CCWGG	2 cut(s)	195, 2373
AjuI	GAANNNNNNNTTGG	4 cut(s)	2160, 2192, 2514, 2546
Alw21I	GWGCWC	6 cut(s)	1128, 1344, 1365, 1873, 2373, 2585
Alw26I	GTCTC	6 cut(s)	29, 125, 406, 568, 1974, 2645
Alw44I	GTGCAC	1 cut(s)	1361
AlwI	GGATC	3 cut(s)	274, 1757, 1855
Ama87I	CYCGRG	1 cut(s)	1496
Aor13HI	TCCGGA	1 cut(s)	2601
AoxI	GGCC	5 cut(s)	198, 1349, 1584, 1775, 2202
ApaLI	GTGCAC	1 cut(s)	1361
ApeKI	GCWGC	3 cut(s)	1252, 1294, 1304
ApoI	RAATTY	3 cut(s)	2194, 2726, 2753
AseI	ATTAAT	1 cut(s)	1074
Asp700I	GAANNNNTTC	1 cut(s)	2175
AspLEI	GCGC	1 cut(s)	1622
AspS9I	GGNCC	2 cut(s)	619, 2202
AsuC2I	CCSGG	1 cut(s)	2027
AsuHPI	GGTGA	5 cut(s)	62, 264, 395, 862, 2066
AsuNHI	GCTAGC	1 cut(s)	1616
AvaI	CYCGRG	1 cut(s)	1496
AvaII	GGWCC	1 cut(s)	619
BaeGI	GKGCMC	3 cut(s)	524, 1365, 2635
BanII	GRGCYC	1 cut(s)	1128
BarI	GAAGNNNNNNTAC	2 cut(s)	1894, 1926
BbsI	GAAGAC	1 cut(s)	1292
Bbv12I	GWGCWC	6 cut(s)	1128, 1344, 1365, 1873, 2373, 2585
BbvI	GCAGC	3 cut(s)	1239, 1281, 1291
BciT130I	CCWGG	2 cut(s)	197, 2375
BclI	TGATCA	1 cut(s)	2656
BcnI	CCSGG	1 cut(s)	2027
BcoDI	GTCTC	6 cut(s)	29, 125, 406, 568, 1974, 2645
BfaI	CTAG	9 cut(s)	398, 560, 1169, 1211, 1347, 1562, 1617, 1991, 2078
BfmI	CTRYAG	1 cut(s)	633
BfoI	RGCGCY	1 cut(s)	1623
BfuAI	ACCTGC	1 cut(s)	125
BglII	AGATCT	2 cut(s)	1003, 1131
BisI	GCNGC	5 cut(s)	229, 1253, 1295, 1305, 2205
BlsI	GCNGC	5 cut(s)	230, 1254, 1296, 1306, 2206
BmcAI	AGTACT	1 cut(s)	2646
Bme1390I	CCNGG	3 cut(s)	197, 2027, 2375
Bme18I	GGWCC	1 cut(s)	619
BmeT110I	CYCGRG	1 cut(s)	1496
BmgBI	CACGTC	1 cut(s)	2103
BmgT120I	GGNCC	2 cut(s)	619, 2202
BmiI	GGNNCC	3 cut(s)	180, 620, 2203
BmrFI	CCNGG	3 cut(s)	197, 2027, 2375
BmrI	ACTGGG	3 cut(s)	529, 807, 1856
BmsI	GCATC	1 cut(s)	1186
BmtI	GCTAGC	1 cut(s)	1620
BmuI	ACTGGG	3 cut(s)	529, 807, 1856
BpiI	GAAGAC	1 cut(s)	1292
BplI	GAGNNNNNCTC	2 cut(s)	1691, 1723
BpmI	CTGGAG	1 cut(s)	2669
Bpu10I	CCTNAGC	2 cut(s)	702, 2740
BpuEI	CTTGAG	4 cut(s)	1112, 1464, 1718, 2360
BpuMI	CCSGG	1 cut(s)	2027
BsaAI	YACGTR	1 cut(s)	2516
BsaI	GGTCTC	2 cut(s)	125, 1974
BsaJI	CCNNGG	3 cut(s)	174, 1150, 1352
BsaWI	WCCGGW	1 cut(s)	2601
BsaXI	ACNNNNNCTCC	4 cut(s)	185, 215, 386, 416
Bsc4I	CCNNNNNNNGG	3 cut(s)	442, 1428, 1949
Bse118I	RCCGGY	1 cut(s)	1622
Bse1I	ACTGG	7 cut(s)	535, 686, 802, 1862, 1891, 2130, 2652
Bse3DI	GCAATG	3 cut(s)	1456, 1679, 1743
BseAI	TCCGGA	1 cut(s)	2601
BseBI	CCWGG	2 cut(s)	197, 2375
BseDI	CCNNGG	3 cut(s)	174, 1150, 1352
BseGI	GGATG	3 cut(s)	1201, 1540, 2272
BseLI	CCNNNNNNNGG	3 cut(s)	442, 1428, 1949
BseMI	GCAATG	3 cut(s)	1456, 1679, 1743
BseNI	ACTGG	7 cut(s)	535, 686, 802, 1862, 1891, 2130, 2652
BseRI	GAGGAG	3 cut(s)	874, 888, 1136
BseSI	GKGCMC	3 cut(s)	524, 1365, 2635
BseXI	GCAGC	3 cut(s)	1239, 1281, 1291
BseYI	CCCAGC	1 cut(s)	248
BsgI	GTGCAG	1 cut(s)	2167
BshFI	GGCC	5 cut(s)	200, 1351, 1586, 1777, 2204
BsiHKAI	GWGCWC	6 cut(s)	1128, 1344, 1365, 1873, 2373, 2585
BsiHKCI	CYCGRG	1 cut(s)	1496
BsiSI	CCGG	3 cut(s)	1623, 2027, 2602
BslI	CCNNNNNNNGG	3 cut(s)	442, 1428, 1949
BsmAI	GTCTC	6 cut(s)	29, 125, 406, 568, 1974, 2645
BsnI	GGCC	5 cut(s)	200, 1351, 1586, 1777, 2204
Bso31I	GGTCTC	2 cut(s)	125, 1974
BsoBI	CYCGRG	1 cut(s)	1496
Bsp1286I	GDGCHC	8 cut(s)	524, 1128, 1344, 1365, 1873, 2373, 2585, 2635
Bsp13I	TCCGGA	1 cut(s)	2601
Bsp1407I	TGTACA	2 cut(s)	2004, 2613
Bsp143I	GATC	8 cut(s)	237, 279, 810, 1003, 1131, 1762, 1847, 2656
Bsp19I	CCATGG	1 cut(s)	1150
BspACI	CCGC	4 cut(s)	229, 2205, 2572, 2737
BspANI	GGCC	5 cut(s)	200, 1351, 1586, 1777, 2204
BspEI	TCCGGA	1 cut(s)	2601
BspHI	TCATGA	3 cut(s)	234, 1336, 2722
BspLI	GGNNCC	3 cut(s)	180, 620, 2203
BspMI	ACCTGC	1 cut(s)	125
BspOI	GCTAGC	1 cut(s)	1620
BspPI	GGATC	3 cut(s)	274, 1757, 1855
BspTNI	GGTCTC	2 cut(s)	125, 1974
BsrDI	GCAATG	3 cut(s)	1456, 1679, 1743
BsrFI	RCCGGY	1 cut(s)	1622
BsrGI	TGTACA	2 cut(s)	2004, 2613
BsrI	ACTGG	7 cut(s)	535, 686, 802, 1862, 1891, 2130, 2652
BssAI	RCCGGY	1 cut(s)	1622
BssECI	CCNNGG	3 cut(s)	174, 1150, 1352
BssMI	GATC	8 cut(s)	237, 279, 810, 1003, 1131, 1762, 1847, 2656
BssT1I	CCWWGG	2 cut(s)	1150, 1352
Bst2UI	CCWGG	2 cut(s)	197, 2375
Bst4CI	ACNGT	6 cut(s)	601, 721, 1738, 2188, 2598, 2684
Bst6I	CTCTTC	5 cut(s)	41, 221, 265, 851, 876
BstAPI	GCANNNNNTGC	1 cut(s)	1739
BstAUI	TGTACA	2 cut(s)	2004, 2613
BstBAI	YACGTR	1 cut(s)	2516
BstC8I	GCNNGC	4 cut(s)	337, 1434, 1618, 2476
BstDSI	CCRYGG	1 cut(s)	1150
BstF5I	GGATG	3 cut(s)	1201, 1540, 2272
BstH2I	RGCGCY	1 cut(s)	1623
BstHHI	GCGC	1 cut(s)	1622
BstKTI	GATC	8 cut(s)	240, 282, 813, 1006, 1134, 1765, 1850, 2659
BstMAI	GTCTC	6 cut(s)	29, 125, 406, 568, 1974, 2645
BstMBI	GATC	8 cut(s)	237, 279, 810, 1003, 1131, 1762, 1847, 2656
BstMWI	GCNNNNNNNGC	9 cut(s)	117, 206, 703, 1313, 1348, 1418, 1739, 2580, 2745
BstNI	CCWGG	2 cut(s)	197, 2375
BstNSI	RCATGY	2 cut(s)	2385, 2478
BstSCI	CCNGG	3 cut(s)	195, 2025, 2373
BstSFI	CTRYAG	1 cut(s)	633
BstSLI	GKGCMC	3 cut(s)	524, 1365, 2635
BstV1I	GCAGC	3 cut(s)	1239, 1281, 1291
BstV2I	GAAGAC	1 cut(s)	1292
BstX2I	RGATCY	3 cut(s)	1003, 1131, 1762
BstYI	RGATCY	3 cut(s)	1003, 1131, 1762
BsuRI	GGCC	5 cut(s)	200, 1351, 1586, 1777, 2204
BtgI	CCRYGG	1 cut(s)	1150
BtgZI	GCGATG	1 cut(s)	1830
BtrI	CACGTC	1 cut(s)	2103
BtsCI	GGATG	3 cut(s)	1201, 1540, 2272
BtsI	GCAGTG	1 cut(s)	2249
BtsIMutI	CAGTG	3 cut(s)	693, 2184, 2249
BveI	ACCTGC	1 cut(s)	125
Cac8I	GCNNGC	4 cut(s)	337, 1434, 1618, 2476
CciI	TCATGA	3 cut(s)	234, 1336, 2722
CfoI	GCGC	1 cut(s)	1622
Cfr10I	RCCGGY	1 cut(s)	1622
Cfr13I	GGNCC	2 cut(s)	619, 2202
Csp6I	GTAC	5 cut(s)	867, 982, 2005, 2614, 2645
CspCI	CAANNNNNGTGG	2 cut(s)	1767, 1802
CviQI	GTAC	5 cut(s)	867, 982, 2005, 2614, 2645
DpnI	GATC	8 cut(s)	239, 281, 812, 1005, 1133, 1764, 1849, 2658
DpnII	GATC	8 cut(s)	237, 279, 810, 1003, 1131, 1762, 1847, 2656
Eam1104I	CTCTTC	5 cut(s)	41, 221, 265, 851, 876
EarI	CTCTTC	5 cut(s)	41, 221, 265, 851, 876
Ecl136II	GAGCTC	1 cut(s)	1126
Eco130I	CCWWGG	2 cut(s)	1150, 1352
Eco24I	GRGCYC	1 cut(s)	1128
Eco31I	GGTCTC	2 cut(s)	125, 1974
Eco32I	GATATC	1 cut(s)	1834
Eco47I	GGWCC	1 cut(s)	619
Eco53kI	GAGCTC	1 cut(s)	1126
Eco57I	CTGAAG	1 cut(s)	126
Eco88I	CYCGRG	1 cut(s)	1496
EcoICRI	GAGCTC	1 cut(s)	1126
EcoRI	GAATTC	1 cut(s)	2753
EcoRII	CCWGG	2 cut(s)	195, 2373
EcoRV	GATATC	1 cut(s)	1834
EcoT14I	CCWWGG	2 cut(s)	1150, 1352
EcoT38I	GRGCYC	1 cut(s)	1128
ErhI	CCWWGG	2 cut(s)	1150, 1352
FalI	AAGNNNNNCTT	2 cut(s)	2160, 2192
FauI	CCCGC	1 cut(s)	2579
FbaI	TGATCA	1 cut(s)	2656
Fnu4HI	GCNGC	5 cut(s)	229, 1253, 1295, 1305, 2205
FokI	GGATG	3 cut(s)	1208, 1547, 2279
FriOI	GRGCYC	1 cut(s)	1128
Fsp4HI	GCNGC	5 cut(s)	229, 1253, 1295, 1305, 2205
FspBI	CTAG	9 cut(s)	398, 560, 1169, 1211, 1347, 1562, 1617, 1991, 2078
GlaI	GCGC	1 cut(s)	1621
GluI	GCNGC	5 cut(s)	229, 1253, 1295, 1305, 2205
GsaI	CCCAGC	1 cut(s)	252
GsuI	CTGGAG	1 cut(s)	2669
HaeII	RGCGCY	1 cut(s)	1623
HaeIII	GGCC	5 cut(s)	200, 1351, 1586, 1777, 2204
HapII	CCGG	3 cut(s)	1623, 2027, 2602
HhaI	GCGC	1 cut(s)	1622
Hin6I	GCGC	1 cut(s)	1620
HinP1I	GCGC	1 cut(s)	1620
HincII	GTYRAC	3 cut(s)	331, 597, 1524
HindII	GTYRAC	3 cut(s)	331, 597, 1524
HindIII	AAGCTT	1 cut(s)	2466
HinfI	GANTC	8 cut(s)	691, 889, 895, 1397, 1700, 1994, 2071, 2441
HpaII	CCGG	3 cut(s)	1623, 2027, 2602
HphI	GGTGA	5 cut(s)	62, 264, 395, 862, 2066
HpyCH4III	ACNGT	6 cut(s)	601, 721, 1738, 2188, 2598, 2684
HpyCH4IV	ACGT	7 cut(s)	549, 1927, 2102, 2331, 2357, 2515, 2524
HpyF10VI	GCNNNNNNNGC	9 cut(s)	117, 206, 703, 1313, 1348, 1418, 1739, 2580, 2745
HpySE526I	ACGT	7 cut(s)	549, 1927, 2102, 2331, 2357, 2515, 2524
HspAI	GCGC	1 cut(s)	1620
Kpn2I	TCCGGA	1 cut(s)	2601
Ksp22I	TGATCA	1 cut(s)	2656
Kzo9I	GATC	8 cut(s)	237, 279, 810, 1003, 1131, 1762, 1847, 2656
LmnI	GCTCC	8 cut(s)	14, 184, 445, 1123, 1687, 1861, 2301, 2376
Lsp1109I	GCAGC	3 cut(s)	1239, 1281, 1291
LweI	GCATC	1 cut(s)	1186
MaeI	CTAG	9 cut(s)	398, 560, 1169, 1211, 1347, 1562, 1617, 1991, 2078
MaeII	ACGT	7 cut(s)	549, 1927, 2102, 2331, 2357, 2515, 2524
MaeIII	GTNAC	3 cut(s)	383, 490, 688
MalI	GATC	8 cut(s)	239, 281, 812, 1005, 1133, 1764, 1849, 2658
MboI	GATC	8 cut(s)	237, 279, 810, 1003, 1131, 1762, 1847, 2656
MfeI	CAATTG	2 cut(s)	19, 483
MflI	RGATCY	3 cut(s)	1003, 1131, 1762
MhlI	GDGCHC	8 cut(s)	524, 1128, 1344, 1365, 1873, 2373, 2585, 2635
MlyI	GAGTC	3 cut(s)	685, 1391, 1709
MmeI	TCCRAC	6 cut(s)	601, 802, 1262, 1425, 1453, 2359
MroI	TCCGGA	1 cut(s)	2601
MroXI	GAANNNNTTC	1 cut(s)	2175
MseI	TTAA	5 cut(s)	645, 1074, 1277, 2157, 2328
MslI	CAYNNNNRTG	3 cut(s)	686, 1460, 2479
MspI	CCGG	3 cut(s)	1623, 2027, 2602
MspR9I	CCNGG	3 cut(s)	197, 2027, 2375
MunI	CAATTG	2 cut(s)	19, 483
MvaI	CCWGG	2 cut(s)	197, 2375
MwoI	GCNNNNNNNGC	9 cut(s)	117, 206, 703, 1313, 1348, 1418, 1739, 2580, 2745
NciI	CCSGG	1 cut(s)	2027
NcoI	CCATGG	1 cut(s)	1150
NdeII	GATC	8 cut(s)	237, 279, 810, 1003, 1131, 1762, 1847, 2656
NheI	GCTAGC	1 cut(s)	1616
NlaIV	GGNNCC	3 cut(s)	180, 620, 2203
NmeAIII	GCCGAG	1 cut(s)	155
NmuCI	GTSAC	2 cut(s)	383, 688
NspI	RCATGY	2 cut(s)	2385, 2478
PaeI	GCATGC	1 cut(s)	2478
PagI	TCATGA	3 cut(s)	234, 1336, 2722
PcsI	WCGNNNNNNNCGW	1 cut(s)	2521
PdmI	GAANNNNTTC	1 cut(s)	2175
PfeI	GAWTC	5 cut(s)	889, 895, 1994, 2071, 2441
PflMI	CCANNNNNTGG	1 cut(s)	442
PkrI	GCNGC	5 cut(s)	230, 1254, 1296, 1306, 2206
PleI	GAGTC	3 cut(s)	685, 1391, 1708
PpsI	GAGTC	3 cut(s)	685, 1391, 1708
Ppu21I	YACGTR	1 cut(s)	2516
PshBI	ATTAAT	1 cut(s)	1074
Psp124BI	GAGCTC	1 cut(s)	1128
Psp6I	CCWGG	2 cut(s)	195, 2373
PspFI	CCCAGC	1 cut(s)	248
PspGI	CCWGG	2 cut(s)	195, 2373
PspN4I	GGNNCC	3 cut(s)	180, 620, 2203
PspPI	GGNCC	2 cut(s)	619, 2202
PsuI	RGATCY	3 cut(s)	1003, 1131, 1762
RsaI	GTAC	5 cut(s)	868, 983, 2006, 2615, 2646
RsaNI	GTAC	5 cut(s)	867, 982, 2005, 2614, 2645
RseI	CAYNNNNRTG	3 cut(s)	686, 1460, 2479
SacI	GAGCTC	1 cut(s)	1128
SaqAI	TTAA	5 cut(s)	645, 1074, 1277, 2157, 2328
SatI	GCNGC	5 cut(s)	229, 1253, 1295, 1305, 2205
Sau3AI	GATC	8 cut(s)	237, 279, 810, 1003, 1131, 1762, 1847, 2656
Sau96I	GGNCC	2 cut(s)	619, 2202
ScaI	AGTACT	1 cut(s)	2646
SchI	GAGTC	3 cut(s)	685, 1391, 1709
ScrFI	CCNGG	3 cut(s)	197, 2027, 2375
SduI	GDGCHC	8 cut(s)	524, 1128, 1344, 1365, 1873, 2373, 2585, 2635
SfaNI	GCATC	1 cut(s)	1186
SfcI	CTRYAG	1 cut(s)	633
SinI	GGWCC	1 cut(s)	619
SmiMI	CAYNNNNRTG	3 cut(s)	686, 1460, 2479
SmlI	CTYRAG	4 cut(s)	1127, 1479, 1697, 2339
SmoI	CTYRAG	4 cut(s)	1127, 1479, 1697, 2339
SphI	GCATGC	1 cut(s)	2478
SsiI	CCGC	4 cut(s)	229, 2205, 2572, 2737
SspI	AATATT	2 cut(s)	1072, 1387
SspMI	CTAG	9 cut(s)	398, 560, 1169, 1211, 1347, 1562, 1617, 1991, 2078
SstI	GAGCTC	1 cut(s)	1128
StyD4I	CCNGG	3 cut(s)	195, 2025, 2373
StyI	CCWWGG	2 cut(s)	1150, 1352
TaaI	ACNGT	6 cut(s)	601, 721, 1738, 2188, 2598, 2684
TaiI	ACGT	7 cut(s)	552, 1930, 2105, 2334, 2360, 2518, 2527
TaqI	TCGA	4 cut(s)	101, 1227, 1830, 2492
TatI	WGTACW	4 cut(s)	981, 2004, 2613, 2644
TauI	GCSGC	2 cut(s)	231, 2207
TfiI	GAWTC	5 cut(s)	889, 895, 1994, 2071, 2441
Tru1I	TTAA	5 cut(s)	645, 1074, 1277, 2157, 2328
Tru9I	TTAA	5 cut(s)	645, 1074, 1277, 2157, 2328
TscAI	CASTG	3 cut(s)	693, 2191, 2256
TseFI	GTSAC	2 cut(s)	383, 688
TseI	GCWGC	3 cut(s)	1252, 1294, 1304
Tsp45I	GTSAC	2 cut(s)	383, 688
TspGWI	ACGGA	1 cut(s)	1888
TspRI	CASTG	3 cut(s)	693, 2191, 2256
Van91I	CCANNNNNTGG	1 cut(s)	442
VneI	GTGCAC	1 cut(s)	1361
VpaK11BI	GGWCC	1 cut(s)	619
VspI	ATTAAT	1 cut(s)	1074
XapI	RAATTY	3 cut(s)	2194, 2726, 2753
XceI	RCATGY	2 cut(s)	2385, 2478
XmnI	GAANNNNTTC	1 cut(s)	2175
XspI	CTAG	9 cut(s)	398, 560, 1169, 1211, 1347, 1562, 1617, 1991, 2078
ZrmI	AGTACT	1 cut(s)	2646

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.