Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0006402

Physical Location & Seq

Genomic Coordinates Forward (+)

3854936 .. 3858196

Gene Structure 3261 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G002090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGAGAAGCTCCAAACCCAATTGTCTCTTTTCTCTCTTCCTGTTCTTCCTATGCTTCCATCTCCTTCTTCACCTTTCACAAGCTCAAGAGCCATCAACTGAAGGCTATACCTGCTCAATCAATGAGACCACCACCAATCCATGCCAAGCCTATGCCTATTACAGAGCCTCGGCTCCTAACTTTCTTGACCTGGCCTCCATAGCTGACCTCTTCTCAGTTAGCCGCCTCATGATCTCCAAACCCAGCAACATCTCTTCCCCAACTTCACCTCTGAACCCAGACCAACCCCTGTTTGTTCCTCTGTCTTGTTCCTGCAACTCAGTCAACGCCAGCATGACCATCTCCTATGCCAATCTCTCGTACACAATCAATGGAGGTGACACATTTTACCTAGTTTCCACCAACAGCTTCCAAAACCTCACAACCTACCAATCTGTGGAGCTTGTGAACCCTACTCTTGTAGCCACCGACCTTGCAATTGGGGTAACTGCATATTTCCCTATCTTTTGCAAGTGCCCCACCAAAACCCAGTCGCAAAACAACGTCAGTTATCTAGTCTCCTATGTGTTCCAACCTTCTGATAACTTGTCAACCGTTGCTTCAAGGTTTGGGGTCCAAACAAACTCTATAGTTGAAGTTAATGGCAATCGTACTCAGCCTTTTGATACCATTTTCATTCCAGTGACTCAGCTTCCTGAGCTATCACAACCTACTGTTGTTCCTTCGCCTCCTTCAAATAAGACTGAGAGGAAAGGAGTGATTACAGGGTTGGCAGTTGGGTTGGGGATTACTGGGTTTTTGCTGATCTTGGCTGTCGGAGTTTTGATTTTTGGAGGTGGGTTGGTGAAGAAGAGGAGAGGTACAAAAGGAGATGAAGAGAAGAATCAGAATCTATATAAGAATGAGAAGGGAGATAAGAGGGCGAAGGAAATGGAAGTGAGTTTGATGGCTGATGTTTCAGATTGCTTGGACAAGTACAGAGTGTTTGGTATTGAAGAACTCAGAGAAGCTACTAATGGGTTTGGAGAGAATTGCTTGATTGAAGGGTCTGTTTACAAAGGAAATATTAATGGGGAGGTCTATGCCATCAAGAAGATGAAGTGGAACGCCTGTGAGGAGCTCAAGATCTTACAGAAGGTAAACCATGGCAATTTGGTGAAGCTAGAAGGCTTCTGCATAGACCCAGAGGATGCAAATTGCTATCTAGTTTATGAGTATGTCGAAAATGGCTCTCTCTATTCATGGCTGCATGAAAACCCGAATGAAAAGGTAAGTTGGAAGACAAGGCTGCATATTGCTGCTGATGTCGCAAATGGTCTGCAATATATTCATGAGCACACTAGGCCAAGGGTCGTGCACAAAGACATAAAGAGCAGTAATATTCTCTTGGACTCCAACATGAGAGCCAAAATAGCCAATTTCGGGCTTGCAAAGTCTGGTTGCAATGCCATAACAATGCACATTGTTGGAACTCAAGGTTATATTGCCCCCGAGTATCTGACTGATGGGGTGGTGTCAACAAAAATGGATGTGTTCTCCTTTGGGGTAGTTTTACTAGAGCTTCTTTCAGGGAAAGAGGCCATTGATGAAGCTGGAAATGTTCTGTGGGCTAGCGCTGGTAGGATTTTGGAGGGAAGTGAGGAACAGAAGGCAGAGAAAGTAAAGCAATGGGTGGACAAGGAGCTTTTCCTTGAGTCATGCTCAATGGAGAGCATAGTGAATGTTGCGACTGTTGCCATTGCCTGTTTGCATAAAGATCCTTCTAAAAGGCCAAGTATGGTGGACATTGTTTATGCCTTGTGTAAGAGCGATGAATTGTTTTTCGATATCTCAGACGATGGATCATCAGCTCCCCCAGTAAGAGCACGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase

Protein Analysis

623

Amino Acids

68.6

Weight (kDa)

5.63

Isoelectric Point (pI)

39.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	48 - 105	3.7e-18	NFP/LYK LysM1 domain
LysM2_NFP	PF23457	115 - 169	9.5e-22	NFP LysM2 domain
LysM2_CERK1_LYK3_4_5	PF23472	117 - 162	8.1e-07	LYK3/4/5 LysM2 domain
LysM3_NFP	PF23462	184 - 228	6.8e-08	NFP LysM3 domain
Pkinase	PF00069	350 - 597	9.6e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	367 - 599	2.5e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006402)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02221
malus_domestica	MD13G1203700.v1.1 MD13G1203800.v1.1 MD16G1205900.v1.1
prunus_persica	Prupe.1G027000_v2.0.a1 Prupe.1G027000_v2.0.a1 Prupe.1G027000_v2.0.a1
pyrus_communis	pycom13g17710 pycom16g17320
rosa_chinensis	RchiOBHm_Chr4g0389541
rosa_laevigata	RLG00000009973 RLG00000009975
rosa_multiflora	Rmu_co8296341.1_g000001 Rmu_co8368025.1_g000001 Rmu_sc0002498.1_g000001 Rmu_sc0003347.1_g000004 Rmu_sc0003582.1_g000008 Rmu_sc0016342.1_g000011
rosa_roxburghii	Rroxscaffold_5G00335500
rosa_rugosa	Rorug03G0323800
rosa_samantha	Rh4AG028200 Rh4BG021400 Rh4CG030100 Rh4DG021900
rosa_wichuraiana	Rw0G017330 Rw4G002050 Rw4G002090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	119
AccB7I	CCANNNNNTGG	1 cut(s)	436
AciI	CCGC	1 cut(s)	223
AclWI	GGATC	2 cut(s)	1751, 1849
AcuI	CTGAAG	1 cut(s)	120
AfaI	GTAC	4 cut(s)	362, 652, 862, 977
AfeI	AGCGCT	1 cut(s)	1615
AfiI	CCNNNNNNNGG	2 cut(s)	436, 1422
AgsI	TTSAA	5 cut(s)	603, 635, 735, 995, 1043
AjnI	CCWGG	1 cut(s)	189
Alw21I	GWGCWC	4 cut(s)	1122, 1338, 1359, 1867
Alw26I	GTCTC	3 cut(s)	29, 119, 562
Alw44I	GTGCAC	1 cut(s)	1355
AlwI	GGATC	2 cut(s)	1751, 1849
Ama87I	CYCGRG	1 cut(s)	1490
Aor51HI	AGCGCT	1 cut(s)	1615
AoxI	GGCC	4 cut(s)	192, 1343, 1578, 1769
ApaLI	GTGCAC	1 cut(s)	1355
ApeKI	GCWGC	3 cut(s)	1246, 1288, 1298
AseI	ATTAAT	1 cut(s)	1068
AspLEI	GCGC	1 cut(s)	1616
AspS9I	GGNCC	1 cut(s)	613
AsuHPI	GGTGA	5 cut(s)	62, 258, 389, 856, 1168
AsuNHI	GCTAGC	1 cut(s)	1610
AvaI	CYCGRG	1 cut(s)	1490
AvaII	GGWCC	1 cut(s)	613
BaeGI	GKGCMC	2 cut(s)	518, 1359
BanII	GRGCYC	1 cut(s)	1122
BbsI	GAAGAC	1 cut(s)	1286
Bbv12I	GWGCWC	4 cut(s)	1122, 1338, 1359, 1867
BbvI	GCAGC	3 cut(s)	1233, 1275, 1285
BccI	CCATC	7 cut(s)	66, 100, 347, 940, 1094, 1499, 1832
BciT130I	CCWGG	1 cut(s)	191
BcoDI	GTCTC	3 cut(s)	29, 119, 562
BfaI	CTAG	7 cut(s)	392, 554, 1163, 1205, 1341, 1556, 1611
BfmI	CTRYAG	1 cut(s)	627
BfoI	RGCGCY	1 cut(s)	1617
BfuAI	ACCTGC	1 cut(s)	119
BglII	AGATCT	1 cut(s)	1125
BisI	GCNGC	4 cut(s)	223, 1247, 1289, 1299
BlsI	GCNGC	4 cut(s)	224, 1248, 1290, 1300
Bme1390I	CCNGG	1 cut(s)	191
Bme18I	GGWCC	1 cut(s)	613
BmeT110I	CYCGRG	1 cut(s)	1490
BmgT120I	GGNCC	1 cut(s)	613
BmiI	GGNNCC	2 cut(s)	174, 614
BmrFI	CCNGG	1 cut(s)	191
BmrI	ACTGGG	3 cut(s)	523, 801, 1850
BmsI	GCATC	1 cut(s)	1180
BmtI	GCTAGC	1 cut(s)	1614
BmuI	ACTGGG	3 cut(s)	523, 801, 1850
BpiI	GAAGAC	1 cut(s)	1286
BplI	GAGNNNNNCTC	2 cut(s)	1685, 1717
Bpu10I	CCTNAGC	1 cut(s)	696
BpuEI	CTTGAG	4 cut(s)	69, 1106, 1458, 1712
BsaI	GGTCTC	1 cut(s)	119
BsaJI	CCNNGG	3 cut(s)	168, 1144, 1346
BsaXI	ACNNNNNCTCC	2 cut(s)	179, 209
Bsc4I	CCNNNNNNNGG	2 cut(s)	436, 1422
Bse1I	ACTGG	4 cut(s)	529, 680, 796, 1856
Bse3DI	GCAATG	3 cut(s)	1450, 1673, 1737
BseBI	CCWGG	1 cut(s)	191
BseDI	CCNNGG	3 cut(s)	168, 1144, 1346
BseGI	GGATG	2 cut(s)	1195, 1534
BseLI	CCNNNNNNNGG	2 cut(s)	436, 1422
BseMI	GCAATG	3 cut(s)	1450, 1673, 1737
BseMII	CTCAG	8 cut(s)	228, 333, 668, 687, 701, 735, 1015, 1845
BseNI	ACTGG	4 cut(s)	529, 680, 796, 1856
BseRI	GAGGAG	2 cut(s)	868, 1130
BseSI	GKGCMC	2 cut(s)	518, 1359
BseXI	GCAGC	3 cut(s)	1233, 1275, 1285
BseYI	CCCAGC	1 cut(s)	242
BshFI	GGCC	4 cut(s)	194, 1345, 1580, 1771
BsiHKAI	GWGCWC	4 cut(s)	1122, 1338, 1359, 1867
BsiHKCI	CYCGRG	1 cut(s)	1490
BslI	CCNNNNNNNGG	2 cut(s)	436, 1422
BsmAI	GTCTC	3 cut(s)	29, 119, 562
BsnI	GGCC	4 cut(s)	194, 1345, 1580, 1771
Bso31I	GGTCTC	1 cut(s)	119
BsoBI	CYCGRG	1 cut(s)	1490
Bsp1286I	GDGCHC	5 cut(s)	518, 1122, 1338, 1359, 1867
Bsp143I	GATC	5 cut(s)	231, 804, 1125, 1756, 1841
Bsp19I	CCATGG	1 cut(s)	1144
BspACI	CCGC	1 cut(s)	223
BspANI	GGCC	4 cut(s)	194, 1345, 1580, 1771
BspCNI	CTCAG	8 cut(s)	227, 332, 667, 688, 700, 736, 1014, 1844
BspHI	TCATGA	2 cut(s)	228, 1330
BspLI	GGNNCC	2 cut(s)	174, 614
BspMI	ACCTGC	1 cut(s)	119
BspOI	GCTAGC	1 cut(s)	1614
BspPI	GGATC	2 cut(s)	1751, 1849
BspTNI	GGTCTC	1 cut(s)	119
BsrDI	GCAATG	3 cut(s)	1450, 1673, 1737
BsrI	ACTGG	4 cut(s)	529, 680, 796, 1856
BssECI	CCNNGG	3 cut(s)	168, 1144, 1346
BssMI	GATC	5 cut(s)	231, 804, 1125, 1756, 1841
BssT1I	CCWWGG	2 cut(s)	1144, 1346
Bst2UI	CCWGG	1 cut(s)	191
Bst4CI	ACNGT	4 cut(s)	595, 715, 1732, 1869
Bst6I	CTCTTC	5 cut(s)	41, 215, 259, 845, 870
BstC8I	GCNNGC	3 cut(s)	331, 1428, 1612
BstDEI	CTNAG	8 cut(s)	214, 319, 654, 687, 696, 744, 1001, 1831
BstDSI	CCRYGG	1 cut(s)	1144
BstF5I	GGATG	2 cut(s)	1195, 1534
BstH2I	RGCGCY	1 cut(s)	1617
BstHHI	GCGC	1 cut(s)	1616
BstKTI	GATC	5 cut(s)	234, 807, 1128, 1759, 1844
BstMAI	GTCTC	3 cut(s)	29, 119, 562
BstMBI	GATC	5 cut(s)	231, 804, 1125, 1756, 1841
BstMWI	GCNNNNNNNGC	7 cut(s)	111, 200, 697, 1307, 1342, 1412, 1733
BstNI	CCWGG	1 cut(s)	191
BstSCI	CCNGG	1 cut(s)	189
BstSFI	CTRYAG	1 cut(s)	627
BstSLI	GKGCMC	2 cut(s)	518, 1359
BstV1I	GCAGC	3 cut(s)	1233, 1275, 1285
BstV2I	GAAGAC	1 cut(s)	1286
BstX2I	RGATCY	2 cut(s)	1125, 1756
BstYI	RGATCY	2 cut(s)	1125, 1756
BsuRI	GGCC	4 cut(s)	194, 1345, 1580, 1771
BtgI	CCRYGG	1 cut(s)	1144
BtgZI	GCGATG	1 cut(s)	1824
BtsCI	GGATG	2 cut(s)	1195, 1534
BtsIMutI	CAGTG	1 cut(s)	687
BveI	ACCTGC	1 cut(s)	119
Cac8I	GCNNGC	3 cut(s)	331, 1428, 1612
CciI	TCATGA	2 cut(s)	228, 1330
CfoI	GCGC	1 cut(s)	1616
Cfr13I	GGNCC	1 cut(s)	613
Csp6I	GTAC	4 cut(s)	361, 651, 861, 976
CspCI	CAANNNNNGTGG	4 cut(s)	454, 489, 1761, 1796
CviAII	CATG	9 cut(s)	141, 229, 334, 1145, 1242, 1250, 1331, 1399, 1698
CviQI	GTAC	4 cut(s)	361, 651, 861, 976
DdeI	CTNAG	8 cut(s)	214, 319, 654, 687, 696, 744, 1001, 1831
DpnI	GATC	5 cut(s)	233, 806, 1127, 1758, 1843
DpnII	GATC	5 cut(s)	231, 804, 1125, 1756, 1841
Eam1104I	CTCTTC	5 cut(s)	41, 215, 259, 845, 870
EarI	CTCTTC	5 cut(s)	41, 215, 259, 845, 870
Ecl136II	GAGCTC	1 cut(s)	1120
Eco130I	CCWWGG	2 cut(s)	1144, 1346
Eco24I	GRGCYC	1 cut(s)	1122
Eco31I	GGTCTC	1 cut(s)	119
Eco32I	GATATC	1 cut(s)	1828
Eco47I	GGWCC	1 cut(s)	613
Eco47III	AGCGCT	1 cut(s)	1615
Eco53kI	GAGCTC	1 cut(s)	1120
Eco57I	CTGAAG	1 cut(s)	120
Eco88I	CYCGRG	1 cut(s)	1490
EcoICRI	GAGCTC	1 cut(s)	1120
EcoRII	CCWGG	1 cut(s)	189
EcoRV	GATATC	1 cut(s)	1828
EcoT14I	CCWWGG	2 cut(s)	1144, 1346
EcoT38I	GRGCYC	1 cut(s)	1122
ErhI	CCWWGG	2 cut(s)	1144, 1346
FaeI	CATG	9 cut(s)	144, 232, 337, 1148, 1245, 1253, 1334, 1402, 1701
FatI	CATG	9 cut(s)	140, 228, 333, 1144, 1241, 1249, 1330, 1398, 1697
Fnu4HI	GCNGC	4 cut(s)	223, 1247, 1289, 1299
FokI	GGATG	2 cut(s)	1202, 1541
FriOI	GRGCYC	1 cut(s)	1122
Fsp4HI	GCNGC	4 cut(s)	223, 1247, 1289, 1299
FspBI	CTAG	7 cut(s)	392, 554, 1163, 1205, 1341, 1556, 1611
GlaI	GCGC	1 cut(s)	1615
GluI	GCNGC	4 cut(s)	223, 1247, 1289, 1299
GsaI	CCCAGC	1 cut(s)	246
HaeII	RGCGCY	1 cut(s)	1617
HaeIII	GGCC	4 cut(s)	194, 1345, 1580, 1771
HhaI	GCGC	1 cut(s)	1616
Hin1II	CATG	9 cut(s)	144, 232, 337, 1148, 1245, 1253, 1334, 1402, 1701
Hin6I	GCGC	1 cut(s)	1614
HinP1I	GCGC	1 cut(s)	1614
HincII	GTYRAC	3 cut(s)	325, 591, 1518
HindII	GTYRAC	3 cut(s)	325, 591, 1518
HinfI	GANTC	5 cut(s)	685, 883, 889, 1391, 1694
HphI	GGTGA	5 cut(s)	62, 258, 389, 856, 1168
Hpy188I	TCNGA	8 cut(s)	273, 580, 818, 888, 961, 1004, 1500, 1834
Hpy188III	TCNNGA	7 cut(s)	86, 185, 229, 695, 1090, 1123, 1331
HpyCH4III	ACNGT	4 cut(s)	595, 715, 1732, 1869
HpyCH4IV	ACGT	1 cut(s)	543
HpyF10VI	GCNNNNNNNGC	7 cut(s)	111, 200, 697, 1307, 1342, 1412, 1733
HpyF3I	CTNAG	8 cut(s)	214, 319, 654, 687, 696, 744, 1001, 1831
HpySE526I	ACGT	1 cut(s)	543
Hsp92II	CATG	9 cut(s)	144, 232, 337, 1148, 1245, 1253, 1334, 1402, 1701
HspAI	GCGC	1 cut(s)	1614
Kzo9I	GATC	5 cut(s)	231, 804, 1125, 1756, 1841
LmnI	GCTCC	6 cut(s)	14, 178, 439, 1117, 1681, 1855
Lsp1109I	GCAGC	3 cut(s)	1233, 1275, 1285
LweI	GCATC	1 cut(s)	1180
MaeI	CTAG	7 cut(s)	392, 554, 1163, 1205, 1341, 1556, 1611
MaeII	ACGT	1 cut(s)	543
MaeIII	GTNAC	3 cut(s)	377, 484, 682
MalI	GATC	5 cut(s)	233, 806, 1127, 1758, 1843
MboI	GATC	5 cut(s)	231, 804, 1125, 1756, 1841
MfeI	CAATTG	2 cut(s)	19, 477
MflI	RGATCY	2 cut(s)	1125, 1756
MhlI	GDGCHC	5 cut(s)	518, 1122, 1338, 1359, 1867
MluCI	AATT	7 cut(s)	19, 477, 1030, 1150, 1195, 1417, 1814
MlyI	GAGTC	3 cut(s)	679, 1385, 1703
MmeI	TCCRAC	5 cut(s)	595, 796, 1256, 1419, 1447
MseI	TTAA	2 cut(s)	639, 1068
MslI	CAYNNNNRTG	2 cut(s)	680, 1454
MspR9I	CCNGG	1 cut(s)	191
MunI	CAATTG	2 cut(s)	19, 477
MvaI	CCWGG	1 cut(s)	191
MwoI	GCNNNNNNNGC	7 cut(s)	111, 200, 697, 1307, 1342, 1412, 1733
NcoI	CCATGG	1 cut(s)	1144
NdeII	GATC	5 cut(s)	231, 804, 1125, 1756, 1841
NheI	GCTAGC	1 cut(s)	1610
NlaIII	CATG	9 cut(s)	144, 232, 337, 1148, 1245, 1253, 1334, 1402, 1701
NlaIV	GGNNCC	2 cut(s)	174, 614
NmeAIII	GCCGAG	1 cut(s)	149
NmuCI	GTSAC	2 cut(s)	377, 682
PagI	TCATGA	2 cut(s)	228, 1330
PfeI	GAWTC	2 cut(s)	883, 889
PflMI	CCANNNNNTGG	1 cut(s)	436
PkrI	GCNGC	4 cut(s)	224, 1248, 1290, 1300
PleI	GAGTC	3 cut(s)	679, 1385, 1702
PpsI	GAGTC	3 cut(s)	679, 1385, 1702
PshBI	ATTAAT	1 cut(s)	1068
Psp124BI	GAGCTC	1 cut(s)	1122
Psp6I	CCWGG	1 cut(s)	189
PspFI	CCCAGC	1 cut(s)	242
PspGI	CCWGG	1 cut(s)	189
PspN4I	GGNNCC	2 cut(s)	174, 614
PspPI	GGNCC	1 cut(s)	613
PsuI	RGATCY	2 cut(s)	1125, 1756
RsaI	GTAC	4 cut(s)	362, 652, 862, 977
RsaNI	GTAC	4 cut(s)	361, 651, 861, 976
RseI	CAYNNNNRTG	2 cut(s)	680, 1454
SacI	GAGCTC	1 cut(s)	1122
SaqAI	TTAA	2 cut(s)	639, 1068
SatI	GCNGC	4 cut(s)	223, 1247, 1289, 1299
Sau3AI	GATC	5 cut(s)	231, 804, 1125, 1756, 1841
Sau96I	GGNCC	1 cut(s)	613
SchI	GAGTC	3 cut(s)	679, 1385, 1703
ScrFI	CCNGG	1 cut(s)	191
SduI	GDGCHC	5 cut(s)	518, 1122, 1338, 1359, 1867
SfaNI	GCATC	1 cut(s)	1180
SfcI	CTRYAG	1 cut(s)	627
SinI	GGWCC	1 cut(s)	613
SmiMI	CAYNNNNRTG	2 cut(s)	680, 1454
SmlI	CTYRAG	4 cut(s)	84, 1121, 1473, 1691
SmoI	CTYRAG	4 cut(s)	84, 1121, 1473, 1691
Sse9I	AATT	7 cut(s)	19, 477, 1030, 1150, 1195, 1417, 1814
SsiI	CCGC	1 cut(s)	223
SspI	AATATT	2 cut(s)	1066, 1381
SspMI	CTAG	7 cut(s)	392, 554, 1163, 1205, 1341, 1556, 1611
SstI	GAGCTC	1 cut(s)	1122
StyD4I	CCNGG	1 cut(s)	189
StyI	CCWWGG	2 cut(s)	1144, 1346
TaaI	ACNGT	4 cut(s)	595, 715, 1732, 1869
TaiI	ACGT	1 cut(s)	546
TaqI	TCGA	2 cut(s)	1221, 1824
TasI	AATT	7 cut(s)	19, 477, 1030, 1150, 1195, 1417, 1814
TatI	WGTACW	1 cut(s)	975
TauI	GCSGC	1 cut(s)	225
TfiI	GAWTC	2 cut(s)	883, 889
Tru1I	TTAA	2 cut(s)	639, 1068
Tru9I	TTAA	2 cut(s)	639, 1068
TscAI	CASTG	1 cut(s)	687
TseFI	GTSAC	2 cut(s)	377, 682
TseI	GCWGC	3 cut(s)	1246, 1288, 1298
Tsp45I	GTSAC	2 cut(s)	377, 682
TspDTI	ATGAA	9 cut(s)	664, 888, 1112, 1230, 1266, 1278, 1319, 1602, 1827
TspRI	CASTG	1 cut(s)	687
Van91I	CCANNNNNTGG	1 cut(s)	436
VneI	GTGCAC	1 cut(s)	1355
VpaK11BI	GGWCC	1 cut(s)	613
VspI	ATTAAT	1 cut(s)	1068
XspI	CTAG	7 cut(s)	392, 554, 1163, 1205, 1341, 1556, 1611

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.