Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0003524

Physical Location & Seq

Genomic Coordinates Forward (+)

5855610 .. 5867070

Gene Structure 11461 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g06020.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2988 bp

ATGAGCGCTGTTTCGGGGATGATTTCGCGCCAAGTTTTGCCTGCCTGTGGCAGCCTTTGCTTCTTCTGCCCGGCATTGCGAGCCAGGTCTAGACAGCCGGTTAAGAGGTACAAGAAGCTCATTGCTGATATTTTCCCTCGGAACCAGGAAGAGGAACCTAATGATCGGAAGATTGGGAAGTTGTGCGAATATGTTGCCAAAAATCCTTTGCGAATCCCAAAGATTACAACTTATCTTGAGCAAAGGTGCTACAAAGAATTGAGGAACGAGAACTTTCGATCCGCAAAAATTGTAATGTGCATTTACAACAAATTGCTGATTTCTTGTAAGGAGCAAATGCCTCTTTTTGCAAGTAGCTTGCTTAGCATTATGCATACACTTCTGGATCAAACACGGCAAGATGAAATGCAAATTATAGGATGTCAGACTCTTTTCAACTTTGTAAATAATCAGACAGATGGAACTTACACGTTCAACTTAGAAGGCTTTATTCCAAAACTCTGTCAGATAGCTCAAGAGCCGGGGGAAGATGAAAGGGCAAGTAATCTACGTTCAGCTGCACTCCAAGCCCTTTCTTCAATGGTTTGGTTTATGGGTGAGAACTCTCATATATCAGTTGAGTTCGATAACATTGTTGCAGTTGTCTTAGAAAATTATGGAAGCTCAAATAAAACTACAGAGAACCTTGAAGGCTCAAAGAATCGGTGGGTACAGGAAGTGCAAAGTAACGAGGGTCATTGTTCTTCTTCCCCAGATGTCGCCATCAGGCTTACATCTTGGAGCACCCTTGTGGATGACAAAGGCGAACTAAATGTGACAGTGGAAGATGCCAAGAACCCCTGCTTTTGGTCTAGGGTCTGCCTGCACAACATGGCCAAGCTAGCCAAGGAGGCTACAACAATCAGACGTGTCTTGGAATCTCTGTTCCGTTACTTCGACACAGGGAACTTATGGTCTCCCAAATATGGTCTTGCTATCCCAGTCCTAAAGGATATACAAGTTTTAATGGATGATTGTGGGAAAAGTACACATATTTTGCTTTCCATTCTAATCAAGCATTTGGATCACAAAAATGTCCTCAAACAACCCAACATGCAGCTCGAAATAGCGGAGGTTACCACCACTCTTTCTCAACTTGCCAAGGTTGAGCCCTCTGTGGCAATAATTGGTGCAGTAAGTGATGCCATGAGGCATTTGAGGAAGAGCATTCACTGCTCACTTGATGATGCTAATCTGGGAACAGATGTAACAAAATGGAACAGAAGCTTTAGAGAAGCGGTGGATAAGTGCCTTGTACAGTTATGTTATAAGGTTGGAGAACCAGGACCAATCCTTGATGCTATGGCTGTTATGTTGGAAAATATCTCGACTATTACAGTTATAGCCAGAAATACAATCTCTGCTGTTTATCGTACCGCTCAAATTGTAGCTTCCTTACCAAATTTGTCCTATCAAAACAAGGCTTTCCCTGAGGCATTGTTTCATCAATTACTGCCAGCTATGGTCCATCCAGACCATGAAACACGTGTTGGAGCACATCGCATCTTCTCTGTTGTTCTTGTGCCATCTTCAGTTTGTCCTAGTCGATCCTCACCTAATACCGAGTCAAAAAAGGCATTGAATTTTCCCAGGACACTCTCAAGAACTGTATCTGTCTTTTCTTCTTCAGCTGCCCTCTTTGAGAAGCTGAGGAGAGAGAAAATTTCTTCACGAGAAAGTATTTGTGAAGAGGACAATGAAAATACAGGTAATGAGGGGGAACAAAGAGATACCAATAATGGGATTCTGAGCAGATTGAGGTCTTCTTATAGTCGGTCATATAGCATAAAAAGTTCTCCTGCACCTTCAGCAACAAAAGAAAATTCTGTCAACAGTTCGACTAAGGAACCTGAAGCTAATTCCCTCAGATTGAGCAGCCACCAGATAACTCTATTGCTTTTATCAATTTGGGCGCAATCCATCTCTCCTGGGAACATGCCGGAAAACTATGAAGCAATTGCTCATACGCTTAGCCTTGTAGTACTGTTTTCTCAGGCCAAGAATTCCAGAATTGAGGTTCTTGTTCGAAGTTTTCAACTGGCATTTTCCTTGCGGAACATCTCTCTTAATGAAGGAGGGCCGCTGCCACCATCCCGTCGCAGGTCCCTTTTTACCCTTGCAACTTCAATGATTCTCTTTCTATCAAAAGCATACAATATTGTTTCTCTTGTTCGTAGAGCCAAGGCGGTACTTGTGGATAAAATAGTTGATCCGTTCCTGCATTTGGTTGAAGATCGCAAGTTACAGGCTGTCAAGACTGGACCGGACCATCCCAGACATCTTGATCGATCTGAAGAAGATGATAACATGGCATTAAAATCTCTATCAGAGATAAATATTACTGAAGAGCAAACCAAGGAATTTTTTGCTTCTGAAGTTGTGAAGAGCTTGGAAAGATTGTTAGATGCTGAAATGTCTACTATAAGGGAGGAGCTGCTCAGTGAATTCTTACCTGATGATGTGTGTCCACTGGGAGCCCAGTTGTGTATGGATGCCCCGCAAAAGTTGTATCAGGTTGATTCGAGAGACAGTAAATCTATGAAAGAGGTCCTGGAGACAGCACATCAAGTTGGAAGAGTATCGGTCTCAAATGCACCTGACGTGCCATACAAGGAAATGGCCGGCCACTGTGAGGCACTCCTGTTAGGAAAGCAGCAAAAGATGTCAAATTTGATGAGTTCCCAACCAAAGCAGGAATATTTGATGAATCAGTCTTTCCAAAATCACAGTGATGATGCCAAATGGATGACATCCGACTTCCATGTTGGCTTCGGCTCACATAGGAGCGGAAATCCATTTGTTGACGACACTGCGAATTCATACAAACCATCCCCTAGCGCAGGCCATGCCCCGACGATGTGTGTAACCGAATACCAGCATCATCCGCACTCTTTCAGACTACCAGCGTCGAGTCCGTATGATAACTTCCTAAAAGCCGCAGGTTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

996

Amino Acids

111.41

Weight (kDa)

7.32

Isoelectric Point (pI)

51.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003524)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41830 AT2G41830
fragaria_vesca	FvH4_6g23620 FvH4_6g23620 FvH4_6g23620 FvH4_6g23620 FvH4_6g23620 FvH4_6g23620 FvH4_6g23620 FvH4_6g23620
malus_domestica	MD12G1077200.v1.1 MD14G1070800.v1.1
prunus_persica	Prupe.7G063500_v2.0.a1 Prupe.7G063500_v2.0.a1
pyrus_communis	pycom12g06250 pycom14g06020
rosa_chinensis	RchiOBHm_Chr3g0481871
rosa_laevigata	RLG00000023380
rosa_multiflora	Rmu_ssc0000267.1_g000017
rosa_roxburghii	Rroxscaffold_6G00399810 Rroxscaffold_6G00400140
rosa_rugosa	Rorug03G0194100 Rorug03G0194200
rosa_samantha	Rh1AG268100 Rh3AG245100 Rh3BG280300 Rh3CG275200 Rh3CG275600 Rh3CG276300 Rh3CG276400 Rh4CG314400
rosa_wichuraiana	Rw0G004350 Rw3G021880 Rw3G021900 Rw3G021930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1308
Acc36I	ACCTGC	2 cut(s)	2130, 2969
AccBSI	CCGCTC	2 cut(s)	1418, 2826
AccI	GTMKAC	1 cut(s)	2456
AccII	CGCG	1 cut(s)	28
AclWI	GGATC	5 cut(s)	273, 393, 1071, 1581, 2243
AcoI	YGGCCR	3 cut(s)	873, 2658, 2662
AcsI	RAATTY	9 cut(s)	1441, 1621, 1701, 1861, 2041, 2399, 2483, 2707, 2854
AcuI	CTGAAG	7 cut(s)	1554, 1650, 1830, 1911, 2352, 2403, 2433
AcvI	CACGTG	1 cut(s)	1526
AfaI	GTAC	7 cut(s)	110, 711, 1027, 1296, 1414, 2022, 2229
AfeI	AGCGCT	1 cut(s)	7
AfiI	CCNNNNNNNGG	9 cut(s)	47, 151, 846, 965, 1779, 2139, 2263, 2671, 2879
AflIII	ACRYGT	4 cut(s)	468, 907, 1523, 1525
AgsI	TTSAA	8 cut(s)	436, 475, 579, 689, 1621, 2075, 2166, 2270
AjiI	CACGTC	2 cut(s)	908, 2641
AjnI	CCWGG	6 cut(s)	83, 144, 1321, 1628, 1966, 2589
AjuI	GAANNNNNNNTTGG	2 cut(s)	1512, 1544
AleI	CACNNNNGTG	1 cut(s)	788
AloI	GAACNNNNNNTCC	4 cut(s)	263, 295, 908, 940
Alw21I	GWGCWC	2 cut(s)	785, 1537
Alw26I	GTCTC	4 cut(s)	960, 2559, 2588, 2629
AlwI	GGATC	5 cut(s)	273, 393, 1071, 1581, 2243
Aor51HI	AGCGCT	1 cut(s)	7
AoxI	GGCC	6 cut(s)	873, 2034, 2117, 2658, 2662, 2881
ApeKI	GCWGC	8 cut(s)	51, 557, 1096, 1670, 1914, 2122, 2473, 2692
ApoI	RAATTY	9 cut(s)	1441, 1621, 1701, 1861, 2041, 2399, 2483, 2707, 2854
AspLEI	GCGC	4 cut(s)	8, 30, 1954, 2879
AspS9I	GGNCC	7 cut(s)	1325, 1504, 2117, 2142, 2300, 2305, 2587
AsuC2I	CCSGG	2 cut(s)	71, 522
AsuHPI	GGTGA	2 cut(s)	608, 1584
AsuII	TTCGAA	1 cut(s)	2065
AsuNHI	GCTAGC	1 cut(s)	880
AvaII	GGWCC	6 cut(s)	1325, 1504, 2142, 2300, 2305, 2587
AxyI	CCTNAGG	1 cut(s)	1470
BalI	TGGCCA	1 cut(s)	875
BanII	GRGCYC	2 cut(s)	1152, 2518
BarI	GAAGNNNNNNTAC	2 cut(s)	2948, 2980
BauI	CACGAG	1 cut(s)	1710
BbrPI	CACGTG	1 cut(s)	1526
BbsI	GAAGAC	1 cut(s)	1794
Bbv12I	GWGCWC	2 cut(s)	785, 1537
BbvCI	CCTCAGC	1 cut(s)	1688
BbvI	GCAGC	8 cut(s)	63, 544, 1108, 1657, 1926, 2109, 2460, 2704
BccI	CCATC	8 cut(s)	452, 770, 1515, 1573, 1967, 2137, 2316, 2875
BceAI	ACGGC	1 cut(s)	410
BcgI	CGANNNNNNTGC	2 cut(s)	176, 210
BciT130I	CCWGG	6 cut(s)	85, 146, 1323, 1630, 1968, 2591
BcnI	CCSGG	2 cut(s)	71, 522
BcoDI	GTCTC	4 cut(s)	960, 2559, 2588, 2629
BfaI	CTAG	5 cut(s)	90, 852, 881, 1581, 2874
BfmI	CTRYAG	1 cut(s)	675
BfoI	RGCGCY	1 cut(s)	9
BfuAI	ACCTGC	2 cut(s)	2130, 2969
BglI	GCCNNNNNGGC	1 cut(s)	890
BlpI	GCTNAGC	2 cut(s)	362, 2009
BmcAI	AGTACT	1 cut(s)	2022
Bme1390I	CCNGG	8 cut(s)	71, 85, 146, 522, 1323, 1630, 1968, 2591
Bme18I	GGWCC	6 cut(s)	1325, 1504, 2142, 2300, 2305, 2587
BmgBI	CACGTC	2 cut(s)	908, 2641
BmgT120I	GGNCC	7 cut(s)	1325, 1504, 2117, 2142, 2300, 2305, 2587
BmiI	GGNNCC	5 cut(s)	143, 156, 1887, 2144, 2515
BmrFI	CCNGG	8 cut(s)	71, 85, 146, 522, 1323, 1630, 1968, 2591
BmrI	ACTGGG	3 cut(s)	974, 2512, 2519
BmsI	GCATC	9 cut(s)	817, 1171, 1216, 1327, 1551, 2434, 2521, 2764, 2926
BmtI	GCTAGC	1 cut(s)	884
BmuI	ACTGGG	3 cut(s)	974, 2512, 2519
BpiI	GAAGAC	1 cut(s)	1794
BpmI	CTGGAG	1 cut(s)	2612
Bpu10I	CCTNAGC	1 cut(s)	1688
Bpu1102I	GCTNAGC	2 cut(s)	362, 2009
Bpu14I	TTCGAA	1 cut(s)	2065
BpuEI	CTTGAG	3 cut(s)	257, 498, 1624
BpuMI	CCSGG	2 cut(s)	71, 522
Bsa29I	ATCGAT	1 cut(s)	2326
BsaAI	YACGTR	1 cut(s)	1526
BsaBI	GATNNNNATC	1 cut(s)	1230
BsaI	GGTCTC	2 cut(s)	960, 2629
BsaJI	CCNNGG	8 cut(s)	137, 521, 885, 1140, 1628, 1967, 2220, 2394
BsaWI	WCCGGW	1 cut(s)	2302
Bsc4I	CCNNNNNNNGG	9 cut(s)	47, 151, 846, 965, 1779, 2139, 2263, 2671, 2879
Bse118I	RCCGGY	2 cut(s)	97, 2660
Bse1I	ACTGG	5 cut(s)	980, 2082, 2302, 2514, 2518
Bse21I	CCTNAGG	1 cut(s)	1470
Bse3DI	GCAATG	2 cut(s)	74, 120
Bse8I	GATNNNNATC	1 cut(s)	1230
BseBI	CCWGG	6 cut(s)	85, 146, 1323, 1630, 1968, 2591
BseCI	ATCGAT	1 cut(s)	2326
BseDI	CCNNGG	8 cut(s)	137, 521, 885, 1140, 1628, 1967, 2220, 2394
BseJI	GATNNNNATC	1 cut(s)	1230
BseLI	CCNNNNNNNGG	9 cut(s)	47, 151, 846, 965, 1779, 2139, 2263, 2671, 2879
BseMI	GCAATG	2 cut(s)	74, 120
BseMII	CTCAG	6 cut(s)	1461, 1679, 1778, 1918, 2045, 2491
BseNI	ACTGG	5 cut(s)	980, 2082, 2302, 2514, 2518
BseRI	GAGGAG	2 cut(s)	1705, 2483
BseXI	GCAGC	8 cut(s)	63, 544, 1108, 1657, 1926, 2109, 2460, 2704
BsgI	GTGCAG	4 cut(s)	543, 848, 1191, 1824
Bsh1236I	CGCG	1 cut(s)	28
BshFI	GGCC	6 cut(s)	875, 2036, 2119, 2660, 2664, 2883
BshVI	ATCGAT	1 cut(s)	2326
BsiHKAI	GWGCWC	2 cut(s)	785, 1537
BsiSI	CCGG	6 cut(s)	71, 98, 521, 1979, 2303, 2661
BslFI	GGGAC	1 cut(s)	2128
BslI	CCNNNNNNNGG	9 cut(s)	47, 151, 846, 965, 1779, 2139, 2263, 2671, 2879
BsmAI	GTCTC	4 cut(s)	960, 2559, 2588, 2629
BsmFI	GGGAC	1 cut(s)	2128
BsmI	GAATGC	1 cut(s)	1206
BsnI	GGCC	6 cut(s)	875, 2036, 2119, 2660, 2664, 2883
Bso31I	GGTCTC	2 cut(s)	960, 2629
Bsp119I	TTCGAA	1 cut(s)	2065
Bsp1286I	GDGCHC	4 cut(s)	785, 1152, 1537, 2518
Bsp1407I	TGTACA	1 cut(s)	1294
Bsp143I	GATC	9 cut(s)	163, 278, 385, 1063, 1586, 2248, 2272, 2323, 2327
Bsp1720I	GCTNAGC	2 cut(s)	362, 2009
BspANI	GGCC	6 cut(s)	875, 2036, 2119, 2660, 2664, 2883
BspCNI	CTCAG	6 cut(s)	1462, 1680, 1779, 1917, 2044, 2490
BspDI	ATCGAT	1 cut(s)	2326
BspFNI	CGCG	1 cut(s)	28
BspLI	GGNNCC	5 cut(s)	143, 156, 1887, 2144, 2515
BspMI	ACCTGC	2 cut(s)	2130, 2969
BspOI	GCTAGC	1 cut(s)	884
BspPI	GGATC	5 cut(s)	273, 393, 1071, 1581, 2243
BspQI	GCTCTTC	3 cut(s)	1196, 2379, 2417
BspT104I	TTCGAA	1 cut(s)	2065
BspTNI	GGTCTC	2 cut(s)	960, 2629
BsrBI	CCGCTC	2 cut(s)	1418, 2826
BsrDI	GCAATG	2 cut(s)	74, 120
BsrFI	RCCGGY	2 cut(s)	97, 2660
BsrGI	TGTACA	1 cut(s)	1294
BsrI	ACTGG	5 cut(s)	980, 2082, 2302, 2514, 2518
BssAI	RCCGGY	2 cut(s)	97, 2660
BssECI	CCNNGG	8 cut(s)	137, 521, 885, 1140, 1628, 1967, 2220, 2394
BssMI	GATC	9 cut(s)	163, 278, 385, 1063, 1586, 2248, 2272, 2323, 2327
BssSI	CACGAG	1 cut(s)	1710
BssT1I	CCWWGG	4 cut(s)	885, 1140, 2220, 2394
Bst2BI	CACGAG	1 cut(s)	1710
Bst2UI	CCWGG	6 cut(s)	85, 146, 1323, 1630, 1968, 2591
Bst4CI	ACNGT	9 cut(s)	820, 1299, 1378, 1648, 1874, 2025, 2570, 2669, 2768
Bst6I	CTCTTC	6 cut(s)	144, 1196, 1722, 2379, 2417, 2608
BstAPI	GCANNNNNTGC	3 cut(s)	57, 1212, 2885
BstAUI	TGTACA	1 cut(s)	1294
BstBAI	YACGTR	1 cut(s)	1526
BstBI	TTCGAA	1 cut(s)	2065
BstC8I	GCNNGC	8 cut(s)	42, 81, 359, 863, 882, 1497, 2662, 2881
BstEII	GGTNACC	1 cut(s)	1114
BstENI	CCTNNNNNAGG	1 cut(s)	2877
BstFNI	CGCG	1 cut(s)	28
BstH2I	RGCGCY	1 cut(s)	9
BstHHI	GCGC	4 cut(s)	8, 30, 1954, 2879
BstKTI	GATC	9 cut(s)	166, 281, 388, 1066, 1589, 2251, 2275, 2326, 2330
BstMAI	GTCTC	4 cut(s)	960, 2559, 2588, 2629
BstMBI	GATC	9 cut(s)	163, 278, 385, 1063, 1586, 2248, 2272, 2323, 2327
BstNI	CCWGG	6 cut(s)	85, 146, 1323, 1630, 1968, 2591
BstNSI	RCATGY	2 cut(s)	1096, 1978
BstPI	GGTNACC	1 cut(s)	1114
BstSCI	CCNGG	8 cut(s)	69, 83, 144, 520, 1321, 1628, 1966, 2589
BstSFI	CTRYAG	1 cut(s)	675
BstUI	CGCG	1 cut(s)	28
BstV1I	GCAGC	8 cut(s)	63, 544, 1108, 1657, 1926, 2109, 2460, 2704
BstV2I	GAAGAC	1 cut(s)	1794
Bsu15I	ATCGAT	1 cut(s)	2326
Bsu36I	CCTNAGG	1 cut(s)	1470
BsuRI	GGCC	6 cut(s)	875, 2036, 2119, 2660, 2664, 2883
BsuTUI	ATCGAT	1 cut(s)	2326
BtgZI	GCGATG	1 cut(s)	1523
BtrI	CACGTC	2 cut(s)	908, 2641
BtsI	GCAGTG	2 cut(s)	1210, 2847
BtsIMutI	CAGTG	7 cut(s)	825, 1210, 2485, 2507, 2665, 2773, 2847
BveI	ACCTGC	2 cut(s)	2130, 2969
Cac8I	GCNNGC	8 cut(s)	42, 81, 359, 863, 882, 1497, 2662, 2881
CfoI	GCGC	4 cut(s)	8, 30, 1954, 2879
Cfr10I	RCCGGY	2 cut(s)	97, 2660
Cfr13I	GGNCC	7 cut(s)	1325, 1504, 2117, 2142, 2300, 2305, 2587
ClaI	ATCGAT	1 cut(s)	2326
CseI	GACGC	1 cut(s)	2934
Csp6I	GTAC	7 cut(s)	109, 710, 1026, 1295, 1413, 2021, 2228
CviAII	CATG	8 cut(s)	871, 1093, 1186, 1517, 1975, 2347, 2801, 2885
CviQI	GTAC	7 cut(s)	109, 710, 1026, 1295, 1413, 2021, 2228
DpnI	GATC	9 cut(s)	165, 280, 387, 1065, 1588, 2250, 2274, 2325, 2329
DpnII	GATC	9 cut(s)	163, 278, 385, 1063, 1586, 2248, 2272, 2323, 2327
EaeI	YGGCCR	3 cut(s)	873, 2658, 2662
Eam1104I	CTCTTC	6 cut(s)	144, 1196, 1722, 2379, 2417, 2608
EarI	CTCTTC	6 cut(s)	144, 1196, 1722, 2379, 2417, 2608
Eco130I	CCWWGG	4 cut(s)	885, 1140, 2220, 2394
Eco24I	GRGCYC	2 cut(s)	1152, 2518
Eco31I	GGTCTC	2 cut(s)	960, 2629
Eco47I	GGWCC	6 cut(s)	1325, 1504, 2142, 2300, 2305, 2587
Eco47III	AGCGCT	1 cut(s)	7
Eco57I	CTGAAG	7 cut(s)	1554, 1650, 1830, 1911, 2352, 2403, 2433
Eco72I	CACGTG	1 cut(s)	1526
Eco81I	CCTNAGG	1 cut(s)	1470
Eco91I	GGTNACC	1 cut(s)	1114
EcoNI	CCTNNNNNAGG	1 cut(s)	2877
EcoO109I	RGGNCCY	2 cut(s)	2142, 2587
EcoO65I	GGTNACC	1 cut(s)	1114
EcoRI	GAATTC	3 cut(s)	2041, 2483, 2854
EcoRII	CCWGG	6 cut(s)	83, 144, 1321, 1628, 1966, 2589
EcoT14I	CCWWGG	4 cut(s)	885, 1140, 2220, 2394
EcoT22I	ATGCAT	1 cut(s)	375
EcoT38I	GRGCYC	2 cut(s)	1152, 2518
ErhI	CCWWGG	4 cut(s)	885, 1140, 2220, 2394
FaeI	CATG	8 cut(s)	874, 1096, 1189, 1520, 1978, 2350, 2804, 2888
FaqI	GGGAC	1 cut(s)	2128
FatI	CATG	8 cut(s)	870, 1092, 1185, 1516, 1974, 2346, 2800, 2884
FauI	CCCGC	1 cut(s)	2544
FblI	GTMKAC	1 cut(s)	2456
FriOI	GRGCYC	2 cut(s)	1152, 2518
FseI	GGCCGGCC	1 cut(s)	2664
FspBI	CTAG	5 cut(s)	90, 852, 881, 1581, 2874
GlaI	GCGC	4 cut(s)	7, 29, 1953, 2878
GsuI	CTGGAG	1 cut(s)	2612
HaeII	RGCGCY	1 cut(s)	9
HaeIII	GGCC	6 cut(s)	875, 2036, 2119, 2660, 2664, 2883
HapII	CCGG	6 cut(s)	71, 98, 521, 1979, 2303, 2661
HgaI	GACGC	1 cut(s)	2934
HhaI	GCGC	4 cut(s)	8, 30, 1954, 2879
Hin1II	CATG	8 cut(s)	874, 1096, 1189, 1520, 1978, 2350, 2804, 2888
Hin6I	GCGC	4 cut(s)	6, 28, 1952, 2877
HinP1I	GCGC	4 cut(s)	6, 28, 1952, 2877
HincII	GTYRAC	2 cut(s)	1870, 2842
HindII	GTYRAC	2 cut(s)	1870, 2842
HindIII	AAGCTT	1 cut(s)	1264
HpaII	CCGG	6 cut(s)	71, 98, 521, 1979, 2303, 2661
HphI	GGTGA	2 cut(s)	608, 1584
Hpy166II	GTNNAC	5 cut(s)	1028, 1870, 2457, 2507, 2842
Hpy8I	GTNNAC	5 cut(s)	1028, 1870, 2457, 2507, 2842
Hpy99I	CGWCG	3 cut(s)	2139, 2896, 2950
HpyAV	CCTTC	4 cut(s)	476, 683, 1854, 2105
HpyCH4III	ACNGT	9 cut(s)	820, 1299, 1378, 1648, 1874, 2025, 2570, 2669, 2768
HpyCH4IV	ACGT	5 cut(s)	470, 550, 907, 1525, 2640
HpySE526I	ACGT	5 cut(s)	470, 550, 907, 1525, 2640
Hsp92II	CATG	8 cut(s)	874, 1096, 1189, 1520, 1978, 2350, 2804, 2888
HspAI	GCGC	4 cut(s)	6, 28, 1952, 2877
KroI	GCCGGC	1 cut(s)	2660
KroNI	GCCGGC	1 cut(s)	2662
Kzo9I	GATC	9 cut(s)	163, 278, 385, 1063, 1586, 2248, 2272, 2323, 2327
LguI	GCTCTTC	3 cut(s)	1196, 2379, 2417
LmnI	GCTCC	6 cut(s)	331, 780, 1532, 2470, 2513, 2823
Lsp1109I	GCAGC	8 cut(s)	63, 544, 1108, 1657, 1926, 2109, 2460, 2704
LweI	GCATC	9 cut(s)	817, 1171, 1216, 1327, 1551, 2434, 2521, 2764, 2926
MaeI	CTAG	5 cut(s)	90, 852, 881, 1581, 2874
MaeII	ACGT	5 cut(s)	470, 550, 907, 1525, 2640
MaeIII	GTNAC	7 cut(s)	725, 814, 929, 1114, 1246, 2280, 2902
MalI	GATC	9 cut(s)	165, 280, 387, 1065, 1588, 2250, 2274, 2325, 2329
MbiI	CCGCTC	2 cut(s)	1418, 2826
MboI	GATC	9 cut(s)	163, 278, 385, 1063, 1586, 2248, 2272, 2323, 2327
MfeI	CAATTG	1 cut(s)	1995
MhlI	GDGCHC	4 cut(s)	785, 1152, 1537, 2518
MlsI	TGGCCA	1 cut(s)	875
MluNI	TGGCCA	1 cut(s)	875
MlyI	GAGTC	3 cut(s)	421, 1613, 2959
MmeI	TCCRAC	5 cut(s)	1294, 1335, 1510, 2590, 2817
Mox20I	TGGCCA	1 cut(s)	875
Mph1103I	ATGCAT	1 cut(s)	375
MroNI	GCCGGC	1 cut(s)	2660
MscI	TGGCCA	1 cut(s)	875
MseI	TTAA	4 cut(s)	102, 1004, 2106, 2354
MslI	CAYNNNNRTG	3 cut(s)	788, 1071, 2769
Msp20I	TGGCCA	1 cut(s)	875
MspA1I	CMGCKG	3 cut(s)	557, 1670, 2122
MspI	CCGG	6 cut(s)	71, 98, 521, 1979, 2303, 2661
MspR9I	CCNGG	8 cut(s)	71, 85, 146, 522, 1323, 1630, 1968, 2591
MunI	CAATTG	1 cut(s)	1995
Mva1269I	GAATGC	1 cut(s)	1206
MvaI	CCWGG	6 cut(s)	85, 146, 1323, 1630, 1968, 2591
MvnI	CGCG	1 cut(s)	28
NaeI	GCCGGC	1 cut(s)	2662
NciI	CCSGG	2 cut(s)	71, 522
NdeII	GATC	9 cut(s)	163, 278, 385, 1063, 1586, 2248, 2272, 2323, 2327
NgoMIV	GCCGGC	1 cut(s)	2660
NheI	GCTAGC	1 cut(s)	880
NlaIII	CATG	8 cut(s)	874, 1096, 1189, 1520, 1978, 2350, 2804, 2888
NlaIV	GGNNCC	5 cut(s)	143, 156, 1887, 2144, 2515
NmuCI	GTSAC	1 cut(s)	814
NsiI	ATGCAT	1 cut(s)	375
NspI	RCATGY	2 cut(s)	1096, 1978
NspV	TTCGAA	1 cut(s)	2065
OliI	CACNNNNGTG	1 cut(s)	788
PciSI	GCTCTTC	3 cut(s)	1196, 2379, 2417
PctI	GAATGC	1 cut(s)	1206
PdiI	GCCGGC	1 cut(s)	2662
PfeI	GAWTC	7 cut(s)	213, 700, 917, 1783, 2170, 2558, 2746
PfoI	TCCNGGA	1 cut(s)	2589
PleI	GAGTC	3 cut(s)	421, 1612, 2958
PmaCI	CACGTG	1 cut(s)	1526
PmlI	CACGTG	1 cut(s)	1526
PpsI	GAGTC	3 cut(s)	421, 1612, 2958
Ppu21I	YACGTR	1 cut(s)	1526
PpuMI	RGGWCCY	2 cut(s)	2142, 2587
PsiI	TTATAA	1 cut(s)	1308
Psp5II	RGGWCCY	2 cut(s)	2142, 2587
Psp6I	CCWGG	6 cut(s)	83, 144, 1321, 1628, 1966, 2589
PspCI	CACGTG	1 cut(s)	1526
PspEI	GGTNACC	1 cut(s)	1114
PspGI	CCWGG	6 cut(s)	83, 144, 1321, 1628, 1966, 2589
PspN4I	GGNNCC	5 cut(s)	143, 156, 1887, 2144, 2515
PspPI	GGNCC	7 cut(s)	1325, 1504, 2117, 2142, 2300, 2305, 2587
PspPPI	RGGWCCY	2 cut(s)	2142, 2587
PsrI	GAACNNNNNNTAC	2 cut(s)	535, 567
PvuII	CAGCTG	2 cut(s)	557, 1670
RigI	GGCCGGCC	1 cut(s)	2664
RsaI	GTAC	7 cut(s)	110, 711, 1027, 1296, 1414, 2022, 2229
RsaNI	GTAC	7 cut(s)	109, 710, 1026, 1295, 1413, 2021, 2228
RseI	CAYNNNNRTG	3 cut(s)	788, 1071, 2769
SapI	GCTCTTC	3 cut(s)	1196, 2379, 2417
SaqAI	TTAA	4 cut(s)	102, 1004, 2106, 2354
Sau3AI	GATC	9 cut(s)	163, 278, 385, 1063, 1586, 2248, 2272, 2323, 2327
Sau96I	GGNCC	7 cut(s)	1325, 1504, 2117, 2142, 2300, 2305, 2587
ScaI	AGTACT	1 cut(s)	2022
SchI	GAGTC	3 cut(s)	421, 1613, 2959
ScrFI	CCNGG	8 cut(s)	71, 85, 146, 522, 1323, 1630, 1968, 2591
SduI	GDGCHC	4 cut(s)	785, 1152, 1537, 2518
SfaNI	GCATC	9 cut(s)	817, 1171, 1216, 1327, 1551, 2434, 2521, 2764, 2926
SfcI	CTRYAG	1 cut(s)	675
SfuI	TTCGAA	1 cut(s)	2065
SinI	GGWCC	6 cut(s)	1325, 1504, 2142, 2300, 2305, 2587
SmiMI	CAYNNNNRTG	3 cut(s)	788, 1071, 2769
SmlI	CTYRAG	3 cut(s)	236, 513, 1639
SmoI	CTYRAG	3 cut(s)	236, 513, 1639
SspI	AATATT	3 cut(s)	2197, 2377, 2738
SspMI	CTAG	5 cut(s)	90, 852, 881, 1581, 2874
StyD4I	CCNGG	8 cut(s)	69, 83, 144, 520, 1321, 1628, 1966, 2589
StyI	CCWWGG	4 cut(s)	885, 1140, 2220, 2394
TaaI	ACNGT	9 cut(s)	820, 1299, 1378, 1648, 1874, 2025, 2570, 2669, 2768
TaiI	ACGT	5 cut(s)	473, 553, 910, 1528, 2643
TaqII	GACCGA	2 cut(s)	1803, 2611
TatI	WGTACW	3 cut(s)	1025, 1294, 2020
TauI	GCSGC	2 cut(s)	2122, 2978
TfiI	GAWTC	7 cut(s)	213, 700, 917, 1783, 2170, 2558, 2746
Tru1I	TTAA	4 cut(s)	102, 1004, 2106, 2354
Tru9I	TTAA	4 cut(s)	102, 1004, 2106, 2354
TscAI	CASTG	7 cut(s)	825, 1217, 2485, 2514, 2672, 2773, 2854
TseFI	GTSAC	1 cut(s)	814
TseI	GCWGC	8 cut(s)	51, 557, 1096, 1670, 1914, 2122, 2473, 2692
Tsp45I	GTSAC	1 cut(s)	814
TspGWI	ACGGA	3 cut(s)	917, 2241, 2943
TspRI	CASTG	7 cut(s)	825, 1217, 2485, 2514, 2672, 2773, 2854
VpaK11BI	GGWCC	6 cut(s)	1325, 1504, 2142, 2300, 2305, 2587
XagI	CCTNNNNNAGG	1 cut(s)	2877
XapI	RAATTY	9 cut(s)	1441, 1621, 1701, 1861, 2041, 2399, 2483, 2707, 2854
XbaI	TCTAGA	1 cut(s)	89
XceI	RCATGY	2 cut(s)	1096, 1978
XmiI	GTMKAC	1 cut(s)	2456
XspI	CTAG	5 cut(s)	90, 852, 881, 1581, 2874
ZrmI	AGTACT	1 cut(s)	2022
Zsp2I	ATGCAT	1 cut(s)	375

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.